Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
08:15:48 (173418): wrapper (7.7.26015): starting
08:15:48 (173418): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 08:15:48] Arguments: --nthreads 12
[2024-05-17 08:15:48] Threads: 12
[2024-05-17 08:15:48] Checking for CVMFS
[2024-05-17 08:15:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 08:15:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 08:15:48] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 08:15:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 08:15:49] 2.11.3.0 144541 183643 177980 132844 0 108 34939626 45568001 14404 130560 0 152636681 99.819 85122465 18732 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 08:15:49] CVMFS is ok
[2024-05-17 08:15:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 08:15:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 08:15:49] Further information can be found at the LHC@home message board.
[2024-05-17 08:15:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 08:15:49] Checking for apptainer binary...
[2024-05-17 08:15:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 08:15:49] Running /usr/bin/apptainer --version
[2024-05-17 08:15:49] apptainer version 1.1.8-1.el7
[2024-05-17 08:15:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 08:15:50] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0048.triumf.lcg
[2024-05-17 08:15:50] apptainer works
[2024-05-17 08:15:50] Set ATHENA_PROC_NUMBER=12
[2024-05-17 08:15:50] Set ATHENA_CORE_NUMBER=12
[2024-05-17 08:15:50] Starting ATLAS job with PandaID=6206687110
[2024-05-17 08:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 09:50:26]  *** The last 200 lines of the pilot log: ***
[2024-05-17 09:50:26]  direct_access_wan=False
[2024-05-17 09:50:26]  domain=
[2024-05-17 09:50:26]  filesize=360235
[2024-05-17 09:50:26]  filetype=log
[2024-05-17 09:50:26]  guid=e7b933d1-a0ea-430c-92c2-b08153ecb8a6
[2024-05-17 09:50:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 09:50:26]  is_tar=False
[2024-05-17 09:50:26]  lfn=log.38776104._005000.job.log.tgz.1
[2024-05-17 09:50:26]  mtime=0
[2024-05-17 09:50:26]  protocol_id=None
[2024-05-17 09:50:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 09:50:26]  replicas=None
[2024-05-17 09:50:26]  scope=mc23_13p6TeV
[2024-05-17 09:50:26]  status=None
[2024-05-17 09:50:26]  status_code=0
[2024-05-17 09:50:26]  storage_token=
[2024-05-17 09:50:26]  surl=/home/boinc/slots/0/PanDA_Pilot-6206687110/log.38776104._005000.job.log.tgz.1
[2024-05-17 09:50:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/83/log.38776104._005000.job.log.tgz.1
[2024-05-17 09:50:26]  workdir=None
[2024-05-17 09:50:26] ]
[2024-05-17 09:50:26] 2024-05-17 16:49:57,758 | INFO     | transferring file log.38776104._005000.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6206687110/log.38776104._005000.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 09:50:26] 2024-05-17 16:49:57,758 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6206687110/log.38776104._005000.job.log.tgz.1 /home/boinc/slots/0/log.38776104._005000.job.log.t
[2024-05-17 09:50:26] 2024-05-17 16:49:57,777 | INFO     | adding to output.list: log.38776104._005000.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/83/log.38776104._005000.job.log.tg
[2024-05-17 09:50:26] 2024-05-17 16:49:57,778 | INFO     | summary of transferred files:
[2024-05-17 09:50:26] 2024-05-17 16:49:57,778 | INFO     |  -- lfn=log.38776104._005000.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 09:50:26] 2024-05-17 16:49:57,779 | INFO     | stage-out finished correctly
[2024-05-17 09:50:26] 2024-05-17 16:49:59,773 | INFO     | monitor loop #382: job 0:6206687110 is in state 'finished'
[2024-05-17 09:50:26] 2024-05-17 16:49:59,773 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:50:26] 2024-05-17 16:50:00,179 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 09:50:26] 2024-05-17 16:50:00,229 | INFO     | job 6206687110 has state=finished
[2024-05-17 09:50:26] 2024-05-17 16:50:00,229 | INFO     | preparing for final server update for job 6206687110 in state='finished'
[2024-05-17 09:50:26] 2024-05-17 16:50:00,230 | INFO     | this job has now completed (state=finished)
[2024-05-17 09:50:26] 2024-05-17 16:50:00,230 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 09:50:26] 2024-05-17 16:50:00,230 | INFO     | job 6206687110 has finished - writing final server update
[2024-05-17 09:50:26] 2024-05-17 16:50:00,230 | INFO     | total number of processed events: 400 (read)
[2024-05-17 09:50:26] 2024-05-17 16:50:00,234 | INFO     | executing command: lscpu
[2024-05-17 09:50:26] 2024-05-17 16:50:00,274 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 09:50:26] 2024-05-17 16:50:00,274 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 09:50:26] 2024-05-17 16:50:00,329 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 09:50:26] 2024-05-17 16:50:02,276 | INFO     | monitor loop #383: job 0:6206687110 is in state 'finished'
[2024-05-17 09:50:26] 2024-05-17 16:50:02,276 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,235 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 09:50:26] 2024-05-17 16:50:04,235 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6206687110/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,236 | INFO     | extracted standard info from prmon json
[2024-05-17 09:50:26] 2024-05-17 16:50:04,236 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 09:50:26] 2024-05-17 16:50:04,236 | WARNING  | GPU info not found in prmon json
[2024-05-17 09:50:26] 2024-05-17 16:50:04,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 09:50:26] 2024-05-17 16:50:04,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | fitting pss+swap vs Time
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | model: linear, x: [1715959290.0, 1715959351.0, 1715959412.0, 1715959473.0, 1715959534.0, 1715959595.0, 1715959656.0, 1715959717.0, 1715959778.0, 1715959839.0, 1715
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | sum of square deviations: 190384208.3058823
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | sum of deviations: 20175084479.82353
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | mean x: 1715961852.8588235
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | mean y: 2733306.2352941176
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | -- intersect: -181838374491.73553
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | intersect: -181838374491.73553
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | chi2: 2.6253885914182913
[2024-05-17 09:50:26] 2024-05-17 16:50:04,238 | INFO     | -- intersect: -181838374491.73553
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | current memory leak: 105.97 B/s (using 85 data points, chi2=2.63)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | ..............................
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . Timing measurements:
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . get job = 0 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . initial setup = 1 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . payload setup = 5 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . stage-in = 0 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . payload execution = 5611 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . stage-out = 0 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | . log creation = 0 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,239 | INFO     | ..............................
[2024-05-17 09:50:26] 2024-05-17 16:50:04,632 | INFO     | 
[2024-05-17 09:50:26] 2024-05-17 16:50:04,632 | INFO     | job summary report
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | --------------------------------------------------
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | PanDA job id: 6206687110
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | task id: 38776104
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | errors: (none)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | pilot state: finished 
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | transexitcode: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | exeerrorcode: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | exeerrordiag: 
[2024-05-17 09:50:26] 2024-05-17 16:50:04,633 | INFO     | exitcode: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | exitmsg: OK
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | cpuconsumptiontime: 27704 s
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | nevents: 400
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | neventsw: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | pid: 186243
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | pgrp: 186243
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | corecount: 12
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | event service: False
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | sizes: {0: 2392199, 4: 2392405, 11: 2392433, 5620: 2419024, 5621: 2419023, 5623: 2428033, 5625: 2428217, 5629: 2428387}
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | --------------------------------------------------
[2024-05-17 09:50:26] 2024-05-17 16:50:04,634 | INFO     | 
[2024-05-17 09:50:26] 2024-05-17 16:50:04,635 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,660 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,662 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,662 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,662 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 09:50:26] 2024-05-17 16:50:04,662 | INFO     | job 6206687110 has completed (purged errors)
[2024-05-17 09:50:26] 2024-05-17 16:50:04,662 | INFO     | overall cleanup function is called
[2024-05-17 09:50:26] 2024-05-17 16:50:05,667 | INFO     | --- collectZombieJob: --- 10, [186243]
[2024-05-17 09:50:26] 2024-05-17 16:50:05,667 | INFO     | zombie collector waiting for pid 186243
[2024-05-17 09:50:26] 2024-05-17 16:50:05,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 09:50:26] 2024-05-17 16:50:06,671 | INFO     | collected zombie processes
[2024-05-17 09:50:26] 2024-05-17 16:50:06,671 | INFO     | will now attempt to kill all subprocesses of pid=186243
[2024-05-17 09:50:26] 2024-05-17 16:50:06,828 | INFO     | process IDs to be killed: [186243] (in reverse order)
[2024-05-17 09:50:26] 2024-05-17 16:50:06,928 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 09:50:26] 2024-05-17 16:50:06,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 09:50:26] 2024-05-17 16:50:06,935 | INFO     | did not find any defunct processes belonging to 186243
[2024-05-17 09:50:26] 2024-05-17 16:50:06,941 | INFO     | did not find any defunct processes belonging to 186243
[2024-05-17 09:50:26] 2024-05-17 16:50:06,941 | INFO     | ready for new job
[2024-05-17 09:50:26] 2024-05-17 16:50:06,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 09:50:26] 2024-05-17 16:50:06,942 | INFO     | *************************************
[2024-05-17 09:50:26] 2024-05-17 16:50:06,942 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 09:50:26] 2024-05-17 16:50:06,942 | INFO     | *************************************
[2024-05-17 09:50:26] 2024-05-17 16:50:06,942 | INFO     | 
[2024-05-17 09:50:26] 2024-05-17 16:50:06,944 | INFO     | architecture information:
[2024-05-17 09:50:26] 2024-05-17 16:50:06,945 | INFO     | executing command: cat /etc/os-release
[2024-05-17 09:50:26] 2024-05-17 16:50:06,958 | INFO     | cat /etc/os-release:
[2024-05-17 09:50:26] NAME="CentOS Linux"
[2024-05-17 09:50:26] VERSION="7 (Core)"
[2024-05-17 09:50:26] ID="centos"
[2024-05-17 09:50:26] ID_LIKE="rhel fedora"
[2024-05-17 09:50:26] VERSION_ID="7"
[2024-05-17 09:50:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 09:50:26] ANSI_COLOR="0;31"
[2024-05-17 09:50:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 09:50:26] HOME_URL="https://www.centos.org/"
[2024-05-17 09:50:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 09:50:26] 
[2024-05-17 09:50:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 09:50:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 09:50:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 09:50:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 09:50:26] 
[2024-05-17 09:50:26] 2024-05-17 16:50:06,958 | INFO     | *************************************
[2024-05-17 09:50:26] 2024-05-17 16:50:07,461 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 09:50:26] 2024-05-17 16:50:07,481 | INFO     | sufficient remaining disk space (2056315207680 B)
[2024-05-17 09:50:26] 2024-05-17 16:50:07,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 09:50:26] 2024-05-17 16:50:07,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 09:50:26] 2024-05-17 16:50:07,562 | INFO     | all job control threads have been joined
[2024-05-17 09:50:26] 2024-05-17 16:50:07,696 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 09:50:26] 2024-05-17 16:50:07,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 09:50:26] 2024-05-17 16:50:07,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 09:50:26] 2024-05-17 16:50:08,069 | INFO     | all payload control threads have been joined
[2024-05-17 09:50:26] 2024-05-17 16:50:08,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:50:26] 2024-05-17 16:50:08,297 | INFO     | aborting loop
[2024-05-17 09:50:26] 2024-05-17 16:50:08,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 09:50:26] 2024-05-17 16:50:08,418 | INFO     | all data control threads have been joined
[2024-05-17 09:50:26] 2024-05-17 16:50:08,486 | INFO     | [job] retrieve thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:08,562 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:08,567 | INFO     | [job] control thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:08,616 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:08,630 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:08,765 | INFO     | [job] validate thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,004 | INFO     | [data] copytool_in thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,075 | INFO     | [payload] control thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,302 | INFO     | [job] job monitor thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,304 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:50:26] 2024-05-17 16:50:09,342 | INFO     | [payload] failed_post thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,421 | INFO     | [data] control thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:09,794 | INFO     | [payload] validate_post thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:10,310 | INFO     | [job] queue monitor thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:10,387 | INFO     | [data] copytool_out thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:10,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 09:50:26] 2024-05-17 16:50:14,747 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:18,031 | INFO     | job.realtimelogging is not enabled
[2024-05-17 09:50:26] 2024-05-17 16:50:19,033 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 09:50:26] 2024-05-17 16:50:20,499 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631945803584)>', '<ExcThread(monitor, started 140631229843200)>']
[2024-05-17 09:50:26] 2024-05-17 16:50:20,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 09:50:26] 2024-05-17 16:50:20,749 | INFO     | [monitor] control thread has ended
[2024-05-17 09:50:26] 2024-05-17 16:50:25,524 | INFO     | all workflow threads have been joined
[2024-05-17 09:50:26] 2024-05-17 16:50:25,525 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 09:50:26] 2024-05-17 16:50:25,525 | INFO     | traces error code: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:25,525 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 09:50:26] 2024-05-17 16:50:25,601 [wrapper] ==== pilot stdout END ====
[2024-05-17 09:50:26] 2024-05-17 16:50:25,603 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 09:50:26] 2024-05-17 16:50:25,649 [wrapper] pilotpid: 179695
[2024-05-17 09:50:26] 2024-05-17 16:50:25,693 [wrapper] Pilot exit status: 0
[2024-05-17 09:50:26] 2024-05-17 16:50:25,702 [wrapper] pandaids: 6206687110
[2024-05-17 09:50:26] 2024-05-17 16:50:25,765 [wrapper] cleanup: SIGTERM to supervisor_pilot 200656 179696
[2024-05-17 09:50:26] 2024-05-17 16:50:25,770 [wrapper] Test setup, not cleaning
[2024-05-17 09:50:26] 2024-05-17 16:50:25,778 [wrapper] ==== wrapper stdout END ====
[2024-05-17 09:50:26] 2024-05-17 16:50:25,782 [wrapper] ==== wrapper stderr END ====
[2024-05-17 09:50:26] 2024-05-17 16:50:25,795 [wrapper] apfmon messages muted
[2024-05-17 09:50:26]  *** Error codes and diagnostics ***
[2024-05-17 09:50:26]     "exeErrorCode": 0,
[2024-05-17 09:50:26]     "exeErrorDiag": "",
[2024-05-17 09:50:26]     "pilotErrorCode": 0,
[2024-05-17 09:50:26]     "pilotErrorDiag": "",
[2024-05-17 09:50:26]  *** Listing of results directory ***
[2024-05-17 09:50:26] total 818152
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc    467845 May 15 03:44 pilot3.tar.gz
[2024-05-17 09:50:26] -rwx------ 1 boinc boinc     32251 May 15 03:54 runpilot2-wrapper.sh
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc      5633 May 15 03:54 queuedata.json
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc       100 May 17 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 09:50:26] -rwxr-xr-x 1 boinc boinc      7986 May 17 08:15 run_atlas
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc       105 May 17 08:15 job.xml
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc      6627 May 17 08:15 init_data.xml
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc 604371066 May 17 08:15 EVNT.38776100._000201.pool.root.1
[2024-05-17 09:50:26] drwxrwx--x 2 boinc boinc      4096 May 17 08:15 shared
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc    479998 May 17 08:15 input.tar.gz
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc     17537 May 17 08:15 start_atlas.sh
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc         0 May 17 08:15 boinc_lockfile
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc      2641 May 17 08:15 pandaJob.out
[2024-05-17 09:50:26] -rw------- 1 boinc boinc       424 May 17 08:15 setup.sh.local
[2024-05-17 09:50:26] -rw------- 1 boinc boinc   1019460 May 17 08:15 agis_schedconf.cvmfs.json
[2024-05-17 09:50:26] -rw------- 1 boinc boinc         0 May 17 08:16 agis_ddmendpoints.agis.ALL.json
[2024-05-17 09:50:26] -rw------- 1 boinc boinc   1324701 May 17 08:16 cric_ddmendpoints.json
[2024-05-17 09:50:26] drwx------ 4 boinc boinc      4096 May 17 08:16 pilot3
[2024-05-17 09:50:26] -rw------- 1 boinc boinc 228162194 May 17 09:49 HITS.38776104._005000.pool.root.1
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc       530 May 17 09:49 boinc_task_state.xml
[2024-05-17 09:50:26] -rw------- 1 boinc boinc        95 May 17 09:49 pilot_heartbeat.json
[2024-05-17 09:50:26] -rw------- 1 boinc boinc      1054 May 17 09:49 memory_monitor_summary.json
[2024-05-17 09:50:26] -rw------- 1 boinc boinc    360235 May 17 09:49 log.38776104._005000.job.log.tgz.1
[2024-05-17 09:50:26] -rw------- 1 boinc boinc      7770 May 17 09:50 heartbeat.json
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc        27 May 17 09:50 wrapper_checkpoint.txt
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc      8192 May 17 09:50 boinc_mmap_file
[2024-05-17 09:50:26] -rw------- 1 boinc boinc      4282 May 17 09:50 pilotlog.txt
[2024-05-17 09:50:26] -rw------- 1 boinc boinc    500388 May 17 09:50 log.38776104._005000.job.log.1
[2024-05-17 09:50:26] -rw------- 1 boinc boinc       357 May 17 09:50 output.list
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc       620 May 17 09:50 runtime_log
[2024-05-17 09:50:26] -rw------- 1 boinc boinc    880640 May 17 09:50 result.tar.gz
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc     11286 May 17 09:50 runtime_log.err
[2024-05-17 09:50:26] -rw------- 1 boinc boinc       653 May 17 09:50 cxJMDmwRRR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmuLJKDmoh3GLo.diag
[2024-05-17 09:50:26] -rw-r--r-- 1 boinc boinc     21464 May 17 09:50 stderr.txt
[2024-05-17 09:50:26] HITS file was successfully produced:
[2024-05-17 09:50:26] -rw------- 1 boinc boinc 228162194 May 17 09:49 shared/HITS.pool.root.1
[2024-05-17 09:50:26]  *** Contents of shared directory: ***
[2024-05-17 09:50:26] total 814384
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc 604371066 May 17 08:15 ATLAS.root_0
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc    479998 May 17 08:15 input.tar.gz
[2024-05-17 09:50:26] -rw-r--r-- 2 boinc boinc     17537 May 17 08:15 start_atlas.sh
[2024-05-17 09:50:26] -rw------- 1 boinc boinc 228162194 May 17 09:49 HITS.pool.root.1
[2024-05-17 09:50:26] -rw------- 1 boinc boinc    880640 May 17 09:50 result.tar.gz
09:50:28 (173418): run_atlas exited; CPU time 27562.651084
09:50:28 (173418): called boinc_finish(0)

</stderr_txt>
]]>

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