Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:39:42 (2027751): wrapper (7.7.26015): starting
21:39:42 (2027751): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 21:39:42] Arguments: --nthreads 4
[2024-05-18 21:39:42] Threads: 4
[2024-05-18 21:39:42] Checking for CVMFS
[2024-05-18 21:39:42] No cvmfs_config command found, will try listing directly
[2024-05-18 21:39:42] CVMFS is ok
[2024-05-18 21:39:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 21:39:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 21:39:42] Further information can be found at the LHC@home message board.
[2024-05-18 21:39:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 21:39:42] Checking for apptainer binary...
[2024-05-18 21:39:42] which: no apptainer in ((null))
[2024-05-18 21:39:42] apptainer is not installed, using version from CVMFS
[2024-05-18 21:39:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 21:39:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-18 21:39:43] apptainer works
[2024-05-18 21:39:43] Set ATHENA_PROC_NUMBER=4
[2024-05-18 21:39:43] Set ATHENA_CORE_NUMBER=4
[2024-05-18 21:39:43] Starting ATLAS job with PandaID=6206611517
[2024-05-18 21:39:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 23:58:37]  *** The last 200 lines of the pilot log: ***
[2024-05-18 23:58:37] 2024-05-18 21:58:15,030 | INFO     | sum of square deviations: 697054930.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | sum of deviations: 56461210331.99998
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | mean x: 1716065184.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | mean y: 2227775.007633588
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | -- intersect: -138998463744.73566
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | intersect: -138998463744.73566
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | chi2: 4.288034395579508
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | current chi2=4.288034395579508 (change=0.10849763002336213 %)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | right removable region: 130
[2024-05-18 23:58:37] 2024-05-18 21:58:15,031 | INFO     | model: linear, x: [1716061524.0, 1716061585.0, 1716061646.0, 1716061707.0, 1716061768.0, 1716061829.0, 1716061890.0, 1716061951.0, 1716062012.0, 1716062073.0, 1716
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | sum of square deviations: 697054930.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | sum of deviations: 27449061210.000008
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | mean x: 1716065489.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | mean y: 2289526.6870229007
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | -- intersect: -67574001265.675064
[2024-05-18 23:58:37] 2024-05-18 21:58:15,032 | INFO     | intersect: -67574001265.675064
[2024-05-18 23:58:37] 2024-05-18 21:58:15,033 | INFO     | chi2: 1.660714068800264
[2024-05-18 23:58:37] 2024-05-18 21:58:15,033 | INFO     | current chi2=1.660714068800264 (change=61.31299144651668 %)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,033 | INFO     | model: linear, x: [1716061829.0, 1716061890.0, 1716061951.0, 1716062012.0, 1716062073.0, 1716062134.0, 1716062195.0, 1716062256.0, 1716062317.0, 1716062378.0, 1716
[2024-05-18 23:58:37] 2024-05-18 21:58:15,033 | INFO     | sum of square deviations: 620244187.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | sum of deviations: 1893978965.5000002
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | mean x: 1716065641.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | mean y: 2340281.9603174604
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | -- intersect: -5237841397.965968
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | intersect: -5237841397.965968
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | chi2: 0.04668284788281547
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | current chi2=0.04668284788281547 (change=97.18898943774589 %)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,034 | INFO     | model: linear, x: [1716062134.0, 1716062195.0, 1716062256.0, 1716062317.0, 1716062378.0, 1716062439.0, 1716062500.0, 1716062561.0, 1716062622.0, 1716062683.0, 1716
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | sum of square deviations: 549294020.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | sum of deviations: -683197864.9999999
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | mean x: 1716065794.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | mean y: 2345688.0661157025
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | -- intersect: 2136744468.9964626
[2024-05-18 23:58:37] 2024-05-18 21:58:15,035 | INFO     | intersect: 2136744468.9964626
[2024-05-18 23:58:37] 2024-05-18 21:58:15,036 | INFO     | chi2: 0.0011161864187768443
[2024-05-18 23:58:37] 2024-05-18 21:58:15,036 | INFO     | current chi2=0.0011161864187768443 (change=97.60900101557915 %)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,036 | INFO     | model: linear, x: [1716062439.0, 1716062500.0, 1716062561.0, 1716062622.0, 1716062683.0, 1716062744.0, 1716062805.0, 1716062866.0, 1716062927.0, 1716062988.0, 1716
[2024-05-18 23:58:37] 2024-05-18 21:58:15,036 | INFO     | sum of square deviations: 483971865.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | sum of deviations: -732035746.0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | mean x: 1716065946.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | mean y: 2345793.224137931
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | -- intersect: 2597995884.0229564
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | intersect: 2597995884.0229564
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | chi2: 0.000986715567685401
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | current chi2=0.000986715567685401 (change=11.599393158117966 %)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | left removable region: 40
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | model: linear, x: [1716063659.0, 1716063720.0, 1716063781.0, 1716063842.0, 1716063903.0, 1716063964.0, 1716064025.0, 1716064086.0, 1716064147.0, 1716064208.0, 1716
[2024-05-18 23:58:37] 2024-05-18 21:58:15,037 | INFO     | sum of square deviations: 226022842.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | sum of deviations: 231937585.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | mean x: 1716066373.5
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | mean y: 2342675.3666666667
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | -- intersect: -1758631068.8128898
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | intersect: -1758631068.8128898
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | chi2: 2.679457602901709e-05
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | -- intersect: -1758631068.8128898
[2024-05-18 23:58:37] 2024-05-18 21:58:15,038 | INFO     | current memory leak: 1.03 B/s (using 90 data points, chi2=0.00)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | ..............................
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . Timing measurements:
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . get job = 0 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . initial setup = 1 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . payload setup = 6 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . stage-in = 0 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . payload execution = 8270 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . stage-out = 0 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | . log creation = 0 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,039 | INFO     | ..............................
[2024-05-18 23:58:37] 2024-05-18 21:58:15,211 | WARNING  | process 2047364 is no longer using CPU - aborting
[2024-05-18 23:58:37] 2024-05-18 21:58:15,211 | INFO     | aborting job monitoring since job object (job id=6206611517) has expired
[2024-05-18 23:58:37] 2024-05-18 21:58:15,521 | INFO     | 
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | job summary report
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | --------------------------------------------------
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | PanDA job id: 6206611517
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | task id: 38776104
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | errors: (none)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 23:58:37] 2024-05-18 21:58:15,522 | INFO     | pilot state: finished 
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | transexitcode: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | exeerrorcode: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | exeerrordiag: 
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | exitcode: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | exitmsg: OK
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | cpuconsumptiontime: 30496 s
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | nevents: 400
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | neventsw: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | pid: 2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | pgrp: 2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | corecount: 4
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | event service: False
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | sizes: {0: 2392043, 1: 2392242, 5: 2392448, 11: 2392504, 8279: 2420289, 8280: 2429271, 8282: 2429455, 8286: 2429625}
[2024-05-18 23:58:37] 2024-05-18 21:58:15,524 | INFO     | --------------------------------------------------
[2024-05-18 23:58:37] 2024-05-18 21:58:15,525 | INFO     | 
[2024-05-18 23:58:37] 2024-05-18 21:58:15,525 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/1
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | job 6206611517 has completed (purged errors)
[2024-05-18 23:58:37] 2024-05-18 21:58:15,543 | INFO     | overall cleanup function is called
[2024-05-18 23:58:37] 2024-05-18 21:58:15,545 | INFO     | 8303s have passed since pilot start
[2024-05-18 23:58:37] 2024-05-18 21:58:16,551 | INFO     | --- collectZombieJob: --- 10, [2047364]
[2024-05-18 23:58:37] 2024-05-18 21:58:16,551 | INFO     | zombie collector waiting for pid 2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:16,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 23:58:37] 2024-05-18 21:58:17,556 | INFO     | collected zombie processes
[2024-05-18 23:58:37] 2024-05-18 21:58:17,556 | INFO     | will now attempt to kill all subprocesses of pid=2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:17,780 | INFO     | process IDs to be killed: [2047364] (in reverse order)
[2024-05-18 23:58:37] 2024-05-18 21:58:17,905 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 23:58:37] 2024-05-18 21:58:17,905 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 23:58:37] 2024-05-18 21:58:17,918 | INFO     | did not find any defunct processes belonging to 2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:17,927 | INFO     | did not find any defunct processes belonging to 2047364
[2024-05-18 23:58:37] 2024-05-18 21:58:17,927 | INFO     | ready for new job
[2024-05-18 23:58:37] 2024-05-18 21:58:17,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 23:58:37] 2024-05-18 21:58:17,928 | INFO     | *************************************
[2024-05-18 23:58:37] 2024-05-18 21:58:17,929 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 23:58:37] 2024-05-18 21:58:17,929 | INFO     | *************************************
[2024-05-18 23:58:37] 2024-05-18 21:58:17,929 | INFO     | 
[2024-05-18 23:58:37] 2024-05-18 21:58:17,933 | INFO     | architecture information:
[2024-05-18 23:58:37] 2024-05-18 21:58:17,934 | INFO     | executing command: cat /etc/os-release
[2024-05-18 23:58:37] 2024-05-18 21:58:17,952 | INFO     | cat /etc/os-release:
[2024-05-18 23:58:37] NAME="CentOS Linux"
[2024-05-18 23:58:37] VERSION="7 (Core)"
[2024-05-18 23:58:37] ID="centos"
[2024-05-18 23:58:37] ID_LIKE="rhel fedora"
[2024-05-18 23:58:37] VERSION_ID="7"
[2024-05-18 23:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 23:58:37] ANSI_COLOR="0;31"
[2024-05-18 23:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 23:58:37] HOME_URL="https://www.centos.org/"
[2024-05-18 23:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 23:58:37] 
[2024-05-18 23:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 23:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 23:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 23:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 23:58:37] 
[2024-05-18 23:58:37] 2024-05-18 21:58:17,952 | INFO     | *************************************
[2024-05-18 23:58:37] 2024-05-18 21:58:18,455 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/1
[2024-05-18 23:58:37] 2024-05-18 21:58:18,475 | INFO     | sufficient remaining disk space (2970216300544 B)
[2024-05-18 23:58:37] 2024-05-18 21:58:18,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 23:58:37] 2024-05-18 21:58:18,476 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 23:58:37] 2024-05-18 21:58:18,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 23:58:37] 2024-05-18 21:58:18,556 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 23:58:37] 2024-05-18 21:58:18,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 23:58:37] 2024-05-18 21:58:18,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 23:58:37] 2024-05-18 21:58:18,689 | INFO     | all data control threads have been joined
[2024-05-18 23:58:37] 2024-05-18 21:58:18,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:58:37] 2024-05-18 21:58:18,719 | INFO     | aborting loop
[2024-05-18 23:58:37] 2024-05-18 21:58:19,481 | INFO     | [job] retrieve thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,649 | INFO     | [job] validate thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,695 | INFO     | [data] control thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,723 | INFO     | [job] job monitor thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,744 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,874 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,897 | INFO     | [data] copytool_in thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:19,976 | INFO     | all payload control threads have been joined
[2024-05-18 23:58:37] 2024-05-18 21:58:19,988 | INFO     | all job control threads have been joined
[2024-05-18 23:58:37] 2024-05-18 21:58:20,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:58:37] 2024-05-18 21:58:20,135 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:20,482 | INFO     | [data] copytool_out thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:20,523 | INFO     | [payload] validate_post thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:20,693 | INFO     | [payload] failed_post thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:20,981 | INFO     | [payload] control thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:20,994 | INFO     | [job] control thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:21,119 | INFO     | [job] queue monitor thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:21,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 23:58:37] 2024-05-18 21:58:25,305 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:29,212 | INFO     | job.realtimelogging is not enabled
[2024-05-18 23:58:37] 2024-05-18 21:58:30,218 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 23:58:37] 2024-05-18 21:58:31,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47209167684672)>', '<ExcThread(monitor, started 47209884165888)>']
[2024-05-18 23:58:37] 2024-05-18 21:58:31,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 23:58:37] 2024-05-18 21:58:31,620 | INFO     | [monitor] control thread has ended
[2024-05-18 23:58:37] 2024-05-18 21:58:36,348 | INFO     | all workflow threads have been joined
[2024-05-18 23:58:37] 2024-05-18 21:58:36,348 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 23:58:37] 2024-05-18 21:58:36,348 | INFO     | traces error code: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:36,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 23:58:37] 2024-05-18 21:58:36,416 [wrapper] ==== pilot stdout END ====
[2024-05-18 23:58:37] 2024-05-18 21:58:36,419 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 23:58:37] 2024-05-18 21:58:36,422 [wrapper] pilotpid: 2032471
[2024-05-18 23:58:37] 2024-05-18 21:58:36,425 [wrapper] Pilot exit status: 0
[2024-05-18 23:58:37] 2024-05-18 21:58:36,434 [wrapper] pandaids: 6206611517
[2024-05-18 23:58:37] 2024-05-18 21:58:36,527 [wrapper] cleanup: SIGTERM to supervisor_pilot 2629711 2032472
[2024-05-18 23:58:37] 2024-05-18 21:58:36,530 [wrapper] Test setup, not cleaning
[2024-05-18 23:58:37] 2024-05-18 21:58:36,531 [wrapper] ==== wrapper stdout END ====
[2024-05-18 23:58:37] 2024-05-18 21:58:36,533 [wrapper] ==== wrapper stderr END ====
[2024-05-18 23:58:37] 2024-05-18 21:58:36,537 [wrapper] apfmon messages muted
[2024-05-18 23:58:37]  *** Error codes and diagnostics ***
[2024-05-18 23:58:37]     "exeErrorCode": 0,
[2024-05-18 23:58:37]     "exeErrorDiag": "",
[2024-05-18 23:58:37]     "pilotErrorCode": 0,
[2024-05-18 23:58:37]     "pilotErrorDiag": "",
[2024-05-18 23:58:37]  *** Listing of results directory ***
[2024-05-18 23:58:37] total 811132
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc    467845 May 15 10:17 pilot3.tar.gz
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc      5633 May 15 10:41 queuedata.json
[2024-05-18 23:58:37] -rwx------ 1 boinc boinc     32251 May 15 10:41 runpilot2-wrapper.sh
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc       100 May 18 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 23:58:37] -rwxr-xr-x 1 boinc boinc      7986 May 18 21:39 run_atlas
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc       105 May 18 21:39 job.xml
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc 597616136 May 18 21:39 EVNT.38776100._000175.pool.root.1
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc      6643 May 18 21:39 init_data.xml
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc     17537 May 18 21:39 start_atlas.sh
[2024-05-18 23:58:37] drwxrwx--x 2 boinc boinc      4096 May 18 21:39 shared
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc    480011 May 18 21:39 input.tar.gz
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc         0 May 18 21:39 boinc_lockfile
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc      2642 May 18 21:39 pandaJob.out
[2024-05-18 23:58:37] -rw------- 1 boinc boinc       424 May 18 21:39 setup.sh.local
[2024-05-18 23:58:37] -rw------- 1 boinc boinc   1019083 May 18 21:39 agis_schedconf.cvmfs.json
[2024-05-18 23:58:37] -rw------- 1 boinc boinc         0 May 18 21:39 agis_ddmendpoints.agis.ALL.json
[2024-05-18 23:58:37] -rw------- 1 boinc boinc   1324701 May 18 21:39 cric_ddmendpoints.json
[2024-05-18 23:58:37] drwx------ 4 boinc boinc      4096 May 18 21:39 pilot3
[2024-05-18 23:58:37] -rw------- 1 boinc boinc 227200663 May 18 23:57 HITS.38776104._004351.pool.root.1
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc       531 May 18 23:58 boinc_task_state.xml
[2024-05-18 23:58:37] -rw------- 1 boinc boinc      1036 May 18 23:58 memory_monitor_summary.json
[2024-05-18 23:58:37] -rw------- 1 boinc boinc    273729 May 18 23:58 log.38776104._004351.job.log.tgz.1
[2024-05-18 23:58:37] -rw------- 1 boinc boinc        95 May 18 23:58 pilot_heartbeat.json
[2024-05-18 23:58:37] -rw------- 1 boinc boinc      7710 May 18 23:58 heartbeat.json
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc      8192 May 18 23:58 boinc_mmap_file
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc        27 May 18 23:58 wrapper_checkpoint.txt
[2024-05-18 23:58:37] -rw------- 1 boinc boinc      4294 May 18 23:58 pilotlog.txt
[2024-05-18 23:58:37] -rw------- 1 boinc boinc    851721 May 18 23:58 log.38776104._004351.job.log.1
[2024-05-18 23:58:37] -rw------- 1 boinc boinc       357 May 18 23:58 output.list
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc       620 May 18 23:58 runtime_log
[2024-05-18 23:58:37] -rw------- 1 boinc boinc   1146880 May 18 23:58 result.tar.gz
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc     11409 May 18 23:58 runtime_log.err
[2024-05-18 23:58:37] -rw------- 1 boinc boinc       654 May 18 23:58 3FqKDmeNPR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmVGJKDmLrx8gn.diag
[2024-05-18 23:58:37] -rw-r--r-- 1 boinc boinc     21248 May 18 23:58 stderr.txt
[2024-05-18 23:58:37] HITS file was successfully produced:
[2024-05-18 23:58:37] -rw------- 1 boinc boinc 227200663 May 18 23:57 shared/HITS.pool.root.1
[2024-05-18 23:58:37]  *** Contents of shared directory: ***
[2024-05-18 23:58:37] total 807108
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc 597616136 May 18 21:39 ATLAS.root_0
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc     17537 May 18 21:39 start_atlas.sh
[2024-05-18 23:58:37] -rw-r--r-- 2 boinc boinc    480011 May 18 21:39 input.tar.gz
[2024-05-18 23:58:37] -rw------- 1 boinc boinc 227200663 May 18 23:57 HITS.pool.root.1
[2024-05-18 23:58:37] -rw------- 1 boinc boinc   1146880 May 18 23:58 result.tar.gz
23:58:38 (2027751): run_atlas exited; CPU time 30302.086534
23:58:38 (2027751): called boinc_finish(0)

</stderr_txt>
]]>

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