Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:12:13 (1874574): wrapper (7.7.26015): starting
07:12:13 (1874574): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 07:12:13] Arguments: --nthreads 4
[2024-05-18 07:12:13] Threads: 4
[2024-05-18 07:12:13] Checking for CVMFS
[2024-05-18 07:12:13] No cvmfs_config command found, will try listing directly
[2024-05-18 07:12:13] CVMFS is ok
[2024-05-18 07:12:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 07:12:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 07:12:13] Further information can be found at the LHC@home message board.
[2024-05-18 07:12:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 07:12:13] Checking for apptainer binary...
[2024-05-18 07:12:13] which: no apptainer in ((null))
[2024-05-18 07:12:13] apptainer is not installed, using version from CVMFS
[2024-05-18 07:12:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 07:12:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-18 07:12:14] apptainer works
[2024-05-18 07:12:14] Set ATHENA_PROC_NUMBER=4
[2024-05-18 07:12:14] Set ATHENA_CORE_NUMBER=4
[2024-05-18 07:12:14] Starting ATLAS job with PandaID=6206607584
[2024-05-18 07:12:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 08:55:37]  *** The last 200 lines of the pilot log: ***
[2024-05-18 08:55:37] 2024-05-18 06:55:15,633 | INFO     | model: linear, x: [1716009169.0, 1716009230.0, 1716009291.0, 1716009352.0, 1716009413.0, 1716009474.0, 1716009535.0, 1716009596.0, 1716009657.0, 1716009718.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,633 | INFO     | sum of square deviations: 274312120.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | sum of deviations: 39141043084.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | mean x: 1716012066.5
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | mean y: 2201485.0833333335
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | -- intersect: -244852098891.9484
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | intersect: -244852098891.9484
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | chi2: 4.199099583131557
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | current chi2=4.199099583131557 (change=0.46296814887066645 %)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | right removable region: 95
[2024-05-18 08:55:37] 2024-05-18 06:55:15,634 | INFO     | model: linear, x: [1716009474.0, 1716009535.0, 1716009596.0, 1716009657.0, 1716009718.0, 1716009779.0, 1716009840.0, 1716009901.0, 1716009962.0, 1716010023.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | sum of square deviations: 274312120.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | sum of deviations: 18470028655.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | mean x: 1716012371.5
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | mean y: 2285827.5416666665
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | -- intersect: -115540540621.17487
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | intersect: -115540540621.17487
[2024-05-18 08:55:37] 2024-05-18 06:55:15,635 | INFO     | chi2: 1.616384999829367
[2024-05-18 08:55:37] 2024-05-18 06:55:15,636 | INFO     | current chi2=1.616384999829367 (change=61.68460356167201 %)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,636 | INFO     | model: linear, x: [1716009779.0, 1716009840.0, 1716009901.0, 1716009962.0, 1716010023.0, 1716010084.0, 1716010145.0, 1716010206.0, 1716010267.0, 1716010328.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,636 | INFO     | sum of square deviations: 233641590.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,636 | INFO     | sum of deviations: 152394347.9999999
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | mean x: 1716012524.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | mean y: 2354579.186813187
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | -- intersect: -1116926494.6785643
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | intersect: -1116926494.6785643
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | chi2: 0.046262009694508124
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | current chi2=0.046262009694508124 (change=97.13793374107085 %)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | model: linear, x: [1716010084.0, 1716010145.0, 1716010206.0, 1716010267.0, 1716010328.0, 1716010389.0, 1716010450.0, 1716010511.0, 1716010572.0, 1716010633.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,637 | INFO     | sum of square deviations: 197203697.5
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | sum of deviations: -1481130965.5
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | mean x: 1716012676.5
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | mean y: 2361180.5465116277
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | -- intersect: 12890758023.8901
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | intersect: 12890758023.8901
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | chi2: 0.003370185252087684
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | current chi2=0.003370185252087684 (change=92.71500465642814 %)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | model: linear, x: [1716010389.0, 1716010450.0, 1716010511.0, 1716010572.0, 1716010633.0, 1716010694.0, 1716010755.0, 1716010816.0, 1716010877.0, 1716010938.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,638 | INFO     | sum of square deviations: 164765880.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | sum of deviations: -1543554187.0000005
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | mean x: 1716012829.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | mean y: 2361466.925925926
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | -- intersect: 16078255257.246262
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | intersect: 16078255257.246262
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | chi2: 0.0027425084500798088
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | current chi2=0.0027425084500798088 (change=18.624400591007767 %)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | left removable region: 40
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | model: linear, x: [1716011609.0, 1716011670.0, 1716011731.0, 1716011792.0, 1716011853.0, 1716011914.0, 1716011975.0, 1716012036.0, 1716012097.0, 1716012158.0, 1716
[2024-05-18 08:55:37] 2024-05-18 06:55:15,639 | INFO     | sum of square deviations: 51573060.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | sum of deviations: -482449060.99999994
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | mean x: 1716013256.0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | mean y: 2354539.709090909
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | -- intersect: 16055095719.32404
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | intersect: 16055095719.32404
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | chi2: 0.0019833287162371593
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | -- intersect: 16055095719.32404
[2024-05-18 08:55:37] 2024-05-18 06:55:15,640 | INFO     | current memory leak: -9.35 B/s (using 55 data points, chi2=0.00)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | ..............................
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . Timing measurements:
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . get job = 0 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . initial setup = 1 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . payload setup = 5 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . stage-in = 0 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . payload execution = 6137 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . stage-out = 0 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | . log creation = 0 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,641 | INFO     | ..............................
[2024-05-18 08:55:37] 2024-05-18 06:55:15,698 | INFO     | 
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | job summary report
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | --------------------------------------------------
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | PanDA job id: 6206607584
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | task id: 38776104
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | errors: (none)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | pilot state: finished 
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | transexitcode: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | exeerrorcode: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | exeerrordiag: 
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | exitcode: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | exitmsg: OK
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | cpuconsumptiontime: 22046 s
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | nevents: 400
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | neventsw: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:15,699 | INFO     | pid: 1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | pgrp: 1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | corecount: 4
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | event service: False
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | sizes: {0: 2390694, 1: 2392242, 5: 2392448, 12: 2392504, 6146: 2419434, 6148: 2428418, 6152: 2428602, 6157: 2428772}
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | --------------------------------------------------
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | 
[2024-05-18 08:55:37] 2024-05-18 06:55:15,700 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/1
[2024-05-18 08:55:37] 2024-05-18 06:55:15,854 | WARNING  | process 1886631 is no longer using CPU - aborting
[2024-05-18 08:55:37] 2024-05-18 06:55:15,854 | INFO     | aborting job monitoring since job object (job id=6206607584) has expired
[2024-05-18 08:55:37] 2024-05-18 06:55:15,874 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,874 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,874 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,874 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,874 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,880 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,880 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 08:55:37] 2024-05-18 06:55:15,880 | INFO     | job 6206607584 has completed (purged errors)
[2024-05-18 08:55:37] 2024-05-18 06:55:15,881 | INFO     | overall cleanup function is called
[2024-05-18 08:55:37] 2024-05-18 06:55:16,889 | INFO     | --- collectZombieJob: --- 10, [1886631]
[2024-05-18 08:55:37] 2024-05-18 06:55:16,889 | INFO     | zombie collector waiting for pid 1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:16,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 08:55:37] 2024-05-18 06:55:17,894 | INFO     | collected zombie processes
[2024-05-18 08:55:37] 2024-05-18 06:55:17,894 | INFO     | will now attempt to kill all subprocesses of pid=1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:18,137 | INFO     | process IDs to be killed: [1886631] (in reverse order)
[2024-05-18 08:55:37] 2024-05-18 06:55:18,304 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 08:55:37] 2024-05-18 06:55:18,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 08:55:37] 2024-05-18 06:55:18,315 | INFO     | did not find any defunct processes belonging to 1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:18,322 | INFO     | did not find any defunct processes belonging to 1886631
[2024-05-18 08:55:37] 2024-05-18 06:55:18,323 | INFO     | ready for new job
[2024-05-18 08:55:37] 2024-05-18 06:55:18,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 08:55:37] 2024-05-18 06:55:18,324 | INFO     | *************************************
[2024-05-18 08:55:37] 2024-05-18 06:55:18,324 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 08:55:37] 2024-05-18 06:55:18,324 | INFO     | *************************************
[2024-05-18 08:55:37] 2024-05-18 06:55:18,324 | INFO     | 
[2024-05-18 08:55:37] 2024-05-18 06:55:18,329 | INFO     | architecture information:
[2024-05-18 08:55:37] 2024-05-18 06:55:18,329 | INFO     | executing command: cat /etc/os-release
[2024-05-18 08:55:37] 2024-05-18 06:55:18,343 | INFO     | cat /etc/os-release:
[2024-05-18 08:55:37] NAME="CentOS Linux"
[2024-05-18 08:55:37] VERSION="7 (Core)"
[2024-05-18 08:55:37] ID="centos"
[2024-05-18 08:55:37] ID_LIKE="rhel fedora"
[2024-05-18 08:55:37] VERSION_ID="7"
[2024-05-18 08:55:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 08:55:37] ANSI_COLOR="0;31"
[2024-05-18 08:55:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 08:55:37] HOME_URL="https://www.centos.org/"
[2024-05-18 08:55:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 08:55:37] 
[2024-05-18 08:55:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 08:55:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 08:55:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 08:55:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 08:55:37] 
[2024-05-18 08:55:37] 2024-05-18 06:55:18,344 | INFO     | *************************************
[2024-05-18 08:55:37] 2024-05-18 06:55:18,847 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/1
[2024-05-18 08:55:37] 2024-05-18 06:55:18,869 | INFO     | sufficient remaining disk space (3084349603840 B)
[2024-05-18 08:55:37] 2024-05-18 06:55:18,869 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 08:55:37] 2024-05-18 06:55:18,869 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 08:55:37] 2024-05-18 06:55:18,870 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 08:55:37] 2024-05-18 06:55:19,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:55:37] 2024-05-18 06:55:19,363 | INFO     | aborting loop
[2024-05-18 08:55:37] 2024-05-18 06:55:19,397 | INFO     | all data control threads have been joined
[2024-05-18 08:55:37] 2024-05-18 06:55:19,536 | INFO     | all payload control threads have been joined
[2024-05-18 08:55:37] 2024-05-18 06:55:19,709 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 08:55:37] 2024-05-18 06:55:19,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 08:55:37] 2024-05-18 06:55:19,710 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 08:55:37] 2024-05-18 06:55:19,875 | INFO     | [job] retrieve thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:19,925 | INFO     | [payload] failed_post thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,043 | INFO     | all job control threads have been joined
[2024-05-18 08:55:37] 2024-05-18 06:55:20,369 | INFO     | [job] job monitor thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,402 | INFO     | [data] control thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,541 | INFO     | [payload] control thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,635 | INFO     | [payload] validate_post thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,709 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:55:37] 2024-05-18 06:55:20,773 | INFO     | [data] copytool_in thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,878 | INFO     | [data] copytool_out thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:20,895 | INFO     | [job] validate thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:21,048 | INFO     | [job] control thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:21,108 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:21,147 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:21,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 08:55:37] 2024-05-18 06:55:21,251 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:21,715 | INFO     | [job] queue monitor thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:25,180 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:29,307 | INFO     | job.realtimelogging is not enabled
[2024-05-18 08:55:37] 2024-05-18 06:55:30,313 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 08:55:37] 2024-05-18 06:55:31,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46934641574976)>', '<ExcThread(monitor, started 46934886749952)>']
[2024-05-18 08:55:37] 2024-05-18 06:55:31,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 08:55:37] 2024-05-18 06:55:31,762 | INFO     | [monitor] control thread has ended
[2024-05-18 08:55:37] 2024-05-18 06:55:36,217 | INFO     | all workflow threads have been joined
[2024-05-18 08:55:37] 2024-05-18 06:55:36,217 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 08:55:37] 2024-05-18 06:55:36,217 | INFO     | traces error code: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:36,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 08:55:37] 2024-05-18 06:55:36,298 [wrapper] ==== pilot stdout END ====
[2024-05-18 08:55:37] 2024-05-18 06:55:36,300 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 08:55:37] 2024-05-18 06:55:36,303 [wrapper] pilotpid: 1879169
[2024-05-18 08:55:37] 2024-05-18 06:55:36,304 [wrapper] Pilot exit status: 0
[2024-05-18 08:55:37] 2024-05-18 06:55:36,313 [wrapper] pandaids: 6206607584
[2024-05-18 08:55:37] 2024-05-18 06:55:36,397 [wrapper] cleanup: SIGTERM to supervisor_pilot 2171295 1879170
[2024-05-18 08:55:37] 2024-05-18 06:55:36,399 [wrapper] Test setup, not cleaning
[2024-05-18 08:55:37] 2024-05-18 06:55:36,402 [wrapper] ==== wrapper stdout END ====
[2024-05-18 08:55:37] 2024-05-18 06:55:36,404 [wrapper] ==== wrapper stderr END ====
[2024-05-18 08:55:37] 2024-05-18 06:55:36,408 [wrapper] apfmon messages muted
[2024-05-18 08:55:37]  *** Error codes and diagnostics ***
[2024-05-18 08:55:37]     "exeErrorCode": 0,
[2024-05-18 08:55:37]     "exeErrorDiag": "",
[2024-05-18 08:55:37]     "pilotErrorCode": 0,
[2024-05-18 08:55:37]     "pilotErrorDiag": "",
[2024-05-18 08:55:37]  *** Listing of results directory ***
[2024-05-18 08:55:37] total 810524
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc    467845 May 15 09:17 pilot3.tar.gz
[2024-05-18 08:55:37] -rwx------ 1 boinc boinc     32251 May 15 09:33 runpilot2-wrapper.sh
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc      5633 May 15 09:33 queuedata.json
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc       100 May 18 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 08:55:37] -rwxr-xr-x 1 boinc boinc      7986 May 18 07:12 run_atlas
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc       105 May 18 07:12 job.xml
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc      6645 May 18 07:12 init_data.xml
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc 598868019 May 18 07:12 EVNT.38776100._000162.pool.root.1
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc     17537 May 18 07:12 start_atlas.sh
[2024-05-18 08:55:37] drwxrwx--x 2 boinc boinc      4096 May 18 07:12 shared
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc    480000 May 18 07:12 input.tar.gz
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc         0 May 18 07:12 boinc_lockfile
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc      2641 May 18 07:12 pandaJob.out
[2024-05-18 08:55:37] -rw------- 1 boinc boinc       424 May 18 07:12 setup.sh.local
[2024-05-18 08:55:37] -rw------- 1 boinc boinc   1019065 May 18 07:12 agis_schedconf.cvmfs.json
[2024-05-18 08:55:37] -rw------- 1 boinc boinc         0 May 18 07:12 agis_ddmendpoints.agis.ALL.json
[2024-05-18 08:55:37] -rw------- 1 boinc boinc   1324701 May 18 07:12 cric_ddmendpoints.json
[2024-05-18 08:55:37] drwx------ 4 boinc boinc      4096 May 18 07:12 pilot3
[2024-05-18 08:55:37] -rw------- 1 boinc boinc 225745774 May 18 08:54 HITS.38776104._004042.pool.root.1
[2024-05-18 08:55:37] -rw------- 1 boinc boinc        95 May 18 08:54 pilot_heartbeat.json
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc       530 May 18 08:54 boinc_task_state.xml
[2024-05-18 08:55:37] -rw------- 1 boinc boinc      1041 May 18 08:55 memory_monitor_summary.json
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc      8192 May 18 08:55 boinc_mmap_file
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc        27 May 18 08:55 wrapper_checkpoint.txt
[2024-05-18 08:55:37] -rw------- 1 boinc boinc    274685 May 18 08:55 log.38776104._004042.job.log.tgz.1
[2024-05-18 08:55:37] -rw------- 1 boinc boinc      7723 May 18 08:55 heartbeat.json
[2024-05-18 08:55:37] -rw------- 1 boinc boinc      4295 May 18 08:55 pilotlog.txt
[2024-05-18 08:55:37] -rw------- 1 boinc boinc    638933 May 18 08:55 log.38776104._004042.job.log.1
[2024-05-18 08:55:37] -rw------- 1 boinc boinc       357 May 18 08:55 output.list
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc       620 May 18 08:55 runtime_log
[2024-05-18 08:55:37] -rw------- 1 boinc boinc    931840 May 18 08:55 result.tar.gz
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc     11428 May 18 08:55 runtime_log.err
[2024-05-18 08:55:37] -rw------- 1 boinc boinc       656 May 18 08:55 HaXMDmIKOR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmh1NKDmDX9x1n.diag
[2024-05-18 08:55:37] -rw-r--r-- 1 boinc boinc     21370 May 18 08:55 stderr.txt
[2024-05-18 08:55:37] HITS file was successfully produced:
[2024-05-18 08:55:37] -rw------- 1 boinc boinc 225745774 May 18 08:54 shared/HITS.pool.root.1
[2024-05-18 08:55:37]  *** Contents of shared directory: ***
[2024-05-18 08:55:37] total 806704
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc 598868019 May 18 07:12 ATLAS.root_0
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc     17537 May 18 07:12 start_atlas.sh
[2024-05-18 08:55:37] -rw-r--r-- 2 boinc boinc    480000 May 18 07:12 input.tar.gz
[2024-05-18 08:55:37] -rw------- 1 boinc boinc 225745774 May 18 08:54 HITS.pool.root.1
[2024-05-18 08:55:37] -rw------- 1 boinc boinc    931840 May 18 08:55 result.tar.gz
08:55:38 (1874574): run_atlas exited; CPU time 21859.260611
08:55:38 (1874574): called boinc_finish(0)

</stderr_txt>
]]>

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