Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:46 (1275326): wrapper (7.7.26015): starting
03:31:46 (1275326): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 03:31:46] Arguments: --nthreads 4
[2024-05-18 03:31:46] Threads: 4
[2024-05-18 03:31:46] Checking for CVMFS
[2024-05-18 03:31:46] No cvmfs_config command found, will try listing directly
[2024-05-18 03:31:47] CVMFS is ok
[2024-05-18 03:31:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 03:31:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 03:31:47] Further information can be found at the LHC@home message board.
[2024-05-18 03:31:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 03:31:47] Checking for apptainer binary...
[2024-05-18 03:31:47] which: no apptainer in ((null))
[2024-05-18 03:31:47] apptainer is not installed, using version from CVMFS
[2024-05-18 03:31:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 03:31:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-18 03:31:47] apptainer works
[2024-05-18 03:31:47] Set ATHENA_PROC_NUMBER=4
[2024-05-18 03:31:47] Set ATHENA_CORE_NUMBER=4
[2024-05-18 03:31:47] Starting ATLAS job with PandaID=6206589476
[2024-05-18 03:31:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:27:01]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:27:01] 2024-05-18 03:26:46,343 | WARNING  | GPU info not found in prmon json
[2024-05-18 05:27:01] 2024-05-18 03:26:46,343 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 05:27:01] 2024-05-18 03:26:46,343 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 05:27:01] 2024-05-18 03:26:46,346 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:27:01] 2024-05-18 03:26:46,346 | INFO     | model: linear, x: [1715995944.0, 1715996005.0, 1715996066.0, 1715996127.0, 1715996188.0, 1715996249.0, 1715996310.0, 1715996371.0, 1715996432.0, 1715996493.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,347 | INFO     | sum of square deviations: 447383272.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,347 | INFO     | sum of deviations: 33177836011.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,347 | INFO     | mean x: 1715999360.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | mean y: 2233520.2654867256
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | -- intersect: -127255866914.61389
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | intersect: -127255866914.61389
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | chi2: 4.721881861052301
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | model: linear, x: [1715995944.0, 1715996005.0, 1715996066.0, 1715996127.0, 1715996188.0, 1715996249.0, 1715996310.0, 1715996371.0, 1715996432.0, 1715996493.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,348 | INFO     | sum of square deviations: 390582207.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,349 | INFO     | sum of deviations: 38302444028.5
[2024-05-18 05:27:01] 2024-05-18 03:26:46,349 | INFO     | mean x: 1715999207.5
[2024-05-18 05:27:01] 2024-05-18 03:26:46,349 | INFO     | mean y: 2246607.4166666665
[2024-05-18 05:27:01] 2024-05-18 03:26:46,349 | INFO     | -- intersect: -168277215232.5312
[2024-05-18 05:27:01] 2024-05-18 03:26:46,349 | INFO     | intersect: -168277215232.5312
[2024-05-18 05:27:01] 2024-05-18 03:26:46,350 | INFO     | chi2: 3.9768519055611056
[2024-05-18 05:27:01] 2024-05-18 03:26:46,350 | INFO     | current chi2=3.9768519055611056 (change=15.778242180018479 %)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,350 | INFO     | right removable region: 107
[2024-05-18 05:27:01] 2024-05-18 03:26:46,350 | INFO     | model: linear, x: [1715996249.0, 1715996310.0, 1715996371.0, 1715996432.0, 1715996493.0, 1715996554.0, 1715996615.0, 1715996676.0, 1715996737.0, 1715996798.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,350 | INFO     | sum of square deviations: 390582207.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,351 | INFO     | sum of deviations: 8528530749.500003
[2024-05-18 05:27:01] 2024-05-18 03:26:46,351 | INFO     | mean x: 1715999512.5
[2024-05-18 05:27:01] 2024-05-18 03:26:46,351 | INFO     | mean y: 2299348.6203703703
[2024-05-18 05:27:01] 2024-05-18 03:26:46,351 | INFO     | -- intersect: -37467289245.52484
[2024-05-18 05:27:01] 2024-05-18 03:26:46,351 | INFO     | intersect: -37467289245.52484
[2024-05-18 05:27:01] 2024-05-18 03:26:46,352 | INFO     | chi2: 2.2681971627334923
[2024-05-18 05:27:01] 2024-05-18 03:26:46,352 | INFO     | current chi2=2.2681971627334923 (change=51.96412723828694 %)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,352 | INFO     | model: linear, x: [1715996554.0, 1715996615.0, 1715996676.0, 1715996737.0, 1715996798.0, 1715996859.0, 1715996920.0, 1715996981.0, 1715997042.0, 1715997103.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,352 | INFO     | sum of square deviations: 338804492.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | sum of deviations: -10825520001.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | mean x: 1715999665.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | mean y: 2356380.796116505
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | -- intersect: 54832174561.50312
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | intersect: 54832174561.50312
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | chi2: 0.8556069036960177
[2024-05-18 05:27:01] 2024-05-18 03:26:46,353 | INFO     | current chi2=0.8556069036960177 (change=62.27810713488008 %)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | model: linear, x: [1715996859.0, 1715996920.0, 1715996981.0, 1715997042.0, 1715997103.0, 1715997164.0, 1715997225.0, 1715997286.0, 1715997347.0, 1715997408.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | sum of deviations: -12001099801.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | mean x: 1715999817.5
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | mean y: 2359993.2448979593
[2024-05-18 05:27:01] 2024-05-18 03:26:46,354 | INFO     | -- intersect: 70573454997.75853
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | intersect: 70573454997.75853
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | chi2: 0.8172001575783931
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | current chi2=0.8172001575783931 (change=4.488830788030874 %)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | left removable region: 30
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | model: linear, x: [1715997774.0, 1715997835.0, 1715997896.0, 1715997957.0, 1715998018.0, 1715998079.0, 1715998140.0, 1715998201.0, 1715998262.0, 1715998323.0, 1715
[2024-05-18 05:27:01] 2024-05-18 03:26:46,355 | INFO     | sum of square deviations: 141539398.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,356 | INFO     | sum of deviations: -1692471413.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,356 | INFO     | mean x: 1716000092.0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,356 | INFO     | mean y: 2363942.8571428573
[2024-05-18 05:27:01] 2024-05-18 03:26:46,356 | INFO     | -- intersect: 20521605521.201077
[2024-05-18 05:27:01] 2024-05-18 03:26:46,356 | INFO     | intersect: 20521605521.201077
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | chi2: 0.0172377890797497
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | -- intersect: 20521605521.201077
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | current memory leak: -11.96 B/s (using 77 data points, chi2=0.02)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | ..............................
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | . Timing measurements:
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | . get job = 0 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,357 | INFO     | . initial setup = 1 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | . payload setup = 5 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | . stage-in = 0 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | . payload execution = 6853 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | . stage-out = 0 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | . log creation = 0 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,358 | INFO     | ..............................
[2024-05-18 05:27:01] 2024-05-18 03:26:46,820 | INFO     | 
[2024-05-18 05:27:01] 2024-05-18 03:26:46,820 | INFO     | job summary report
[2024-05-18 05:27:01] 2024-05-18 03:26:46,820 | INFO     | --------------------------------------------------
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | PanDA job id: 6206589476
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | task id: 38776125
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | errors: (none)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | pilot state: finished 
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | transexitcode: 0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | exeerrorcode: 0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | exeerrordiag: 
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | exitcode: 0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | exitmsg: OK
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | cpuconsumptiontime: 24587 s
[2024-05-18 05:27:01] 2024-05-18 03:26:46,821 | INFO     | nevents: 400
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | neventsw: 0
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | pid: 1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | pgrp: 1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | corecount: 4
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | event service: False
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | sizes: {0: 2392257, 5: 2392463, 11: 2392519, 6863: 2419701, 6865: 2428685, 6868: 2428741, 6873: 2429039}
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | --------------------------------------------------
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | 
[2024-05-18 05:27:01] 2024-05-18 03:26:46,822 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/1
[2024-05-18 05:27:01] 2024-05-18 03:26:46,844 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,844 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,844 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,844 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,846 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:27:01] 2024-05-18 03:26:46,847 | INFO     | job 6206589476 has completed (purged errors)
[2024-05-18 05:27:01] 2024-05-18 03:26:46,847 | INFO     | overall cleanup function is called
[2024-05-18 05:27:01] 2024-05-18 03:26:47,856 | INFO     | --- collectZombieJob: --- 10, [1287439]
[2024-05-18 05:27:01] 2024-05-18 03:26:47,856 | INFO     | zombie collector waiting for pid 1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:47,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:27:01] 2024-05-18 03:26:48,862 | INFO     | collected zombie processes
[2024-05-18 05:27:01] 2024-05-18 03:26:48,862 | INFO     | will now attempt to kill all subprocesses of pid=1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:49,062 | INFO     | process IDs to be killed: [1287439] (in reverse order)
[2024-05-18 05:27:01] 2024-05-18 03:26:49,165 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:27:01] 2024-05-18 03:26:49,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:27:01] 2024-05-18 03:26:49,177 | INFO     | did not find any defunct processes belonging to 1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:49,185 | INFO     | did not find any defunct processes belonging to 1287439
[2024-05-18 05:27:01] 2024-05-18 03:26:49,185 | INFO     | ready for new job
[2024-05-18 05:27:01] 2024-05-18 03:26:49,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:27:01] 2024-05-18 03:26:49,186 | INFO     | *************************************
[2024-05-18 05:27:01] 2024-05-18 03:26:49,186 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:27:01] 2024-05-18 03:26:49,186 | INFO     | *************************************
[2024-05-18 05:27:01] 2024-05-18 03:26:49,186 | INFO     | 
[2024-05-18 05:27:01] 2024-05-18 03:26:49,190 | INFO     | architecture information:
[2024-05-18 05:27:01] 2024-05-18 03:26:49,190 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:27:01] 2024-05-18 03:26:49,202 | INFO     | cat /etc/os-release:
[2024-05-18 05:27:01] NAME="CentOS Linux"
[2024-05-18 05:27:01] VERSION="7 (Core)"
[2024-05-18 05:27:01] ID="centos"
[2024-05-18 05:27:01] ID_LIKE="rhel fedora"
[2024-05-18 05:27:01] VERSION_ID="7"
[2024-05-18 05:27:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:27:01] ANSI_COLOR="0;31"
[2024-05-18 05:27:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:27:01] HOME_URL="https://www.centos.org/"
[2024-05-18 05:27:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:27:01] 
[2024-05-18 05:27:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:27:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:27:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:27:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:27:01] 
[2024-05-18 05:27:01] 2024-05-18 03:26:49,203 | INFO     | *************************************
[2024-05-18 05:27:01] 2024-05-18 03:26:49,706 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/1
[2024-05-18 05:27:01] 2024-05-18 03:26:49,719 | INFO     | sufficient remaining disk space (3094210412544 B)
[2024-05-18 05:27:01] 2024-05-18 03:26:49,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:27:01] 2024-05-18 03:26:49,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:27:01] 2024-05-18 03:26:49,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:27:01] 2024-05-18 03:26:49,758 | INFO     | aborting loop
[2024-05-18 05:27:01] 2024-05-18 03:26:49,833 | INFO     | all payload control threads have been joined
[2024-05-18 05:27:01] 2024-05-18 03:26:49,876 | INFO     | all data control threads have been joined
[2024-05-18 05:27:01] 2024-05-18 03:26:50,266 | INFO     | all job control threads have been joined
[2024-05-18 05:27:01] 2024-05-18 03:26:50,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:27:01] 2024-05-18 03:26:50,704 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:27:01] 2024-05-18 03:26:50,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:27:01] 2024-05-18 03:26:50,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:27:01] 2024-05-18 03:26:50,725 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,763 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,839 | INFO     | [payload] control thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,881 | INFO     | [data] control thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,885 | INFO     | [job] validate thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,915 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:50,988 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,154 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,272 | INFO     | [job] control thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,277 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,367 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:27:01] 2024-05-18 03:26:51,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:27:01] 2024-05-18 03:26:51,618 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:51,914 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:52,478 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:52,639 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:55,494 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:27:01] 2024-05-18 03:26:55,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47784541905984)>', '<ExcThread(monitor, started 47784715257600)>']
[2024-05-18 05:27:01] 2024-05-18 03:26:55,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:27:01] 2024-05-18 03:26:55,730 | INFO     | [monitor] control thread has ended
[2024-05-18 05:27:01] 2024-05-18 03:27:00,582 | INFO     | all workflow threads have been joined
[2024-05-18 05:27:01] 2024-05-18 03:27:00,582 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:27:01] 2024-05-18 03:27:00,582 | INFO     | traces error code: 0
[2024-05-18 05:27:01] 2024-05-18 03:27:00,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:27:01] 2024-05-18 03:27:00,666 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:27:01] 2024-05-18 03:27:00,668 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:27:01] 2024-05-18 03:27:00,671 [wrapper] pilotpid: 1279909
[2024-05-18 05:27:01] 2024-05-18 03:27:00,674 [wrapper] Pilot exit status: 0
[2024-05-18 05:27:01] 2024-05-18 03:27:00,682 [wrapper] pandaids: 6206589476
[2024-05-18 05:27:01] 2024-05-18 03:27:00,811 [wrapper] cleanup: SIGTERM to supervisor_pilot 1537758 1279910
[2024-05-18 05:27:01] 2024-05-18 03:27:00,813 [wrapper] Test setup, not cleaning
[2024-05-18 05:27:01] 2024-05-18 03:27:00,816 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:27:01] 2024-05-18 03:27:00,818 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:27:01] 2024-05-18 03:27:00,823 [wrapper] apfmon messages muted
[2024-05-18 05:27:01]  *** Error codes and diagnostics ***
[2024-05-18 05:27:01]     "exeErrorCode": 0,
[2024-05-18 05:27:01]     "exeErrorDiag": "",
[2024-05-18 05:27:01]     "pilotErrorCode": 0,
[2024-05-18 05:27:01]     "pilotErrorDiag": "",
[2024-05-18 05:27:01]  *** Listing of results directory ***
[2024-05-18 05:27:01] total 826020
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc    467845 May 15 09:17 pilot3.tar.gz
[2024-05-18 05:27:01] -rwx------ 1 boinc boinc     32251 May 15 09:29 runpilot2-wrapper.sh
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc      5633 May 15 09:29 queuedata.json
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc       100 May 18 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:27:01] -rwxr-xr-x 1 boinc boinc      7986 May 18 03:31 run_atlas
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc       105 May 18 03:31 job.xml
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc      6645 May 18 03:31 init_data.xml
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc 597968464 May 18 03:31 EVNT.38776119._000245.pool.root.1
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc     17537 May 18 03:31 start_atlas.sh
[2024-05-18 05:27:01] drwxrwx--x 2 boinc boinc      4096 May 18 03:31 shared
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc    480008 May 18 03:31 input.tar.gz
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc         0 May 18 03:31 boinc_lockfile
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc      2634 May 18 03:31 pandaJob.out
[2024-05-18 05:27:01] -rw------- 1 boinc boinc       424 May 18 03:31 setup.sh.local
[2024-05-18 05:27:01] -rw------- 1 boinc boinc   1019073 May 18 03:31 agis_schedconf.cvmfs.json
[2024-05-18 05:27:01] -rw------- 1 boinc boinc         0 May 18 03:31 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:27:01] -rw------- 1 boinc boinc   1324701 May 18 03:31 cric_ddmendpoints.json
[2024-05-18 05:27:01] drwx------ 4 boinc boinc      4096 May 18 03:31 pilot3
[2024-05-18 05:27:01] -rw------- 1 boinc boinc 242388980 May 18 05:26 HITS.38776125._011657.pool.root.1
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc       530 May 18 05:26 boinc_task_state.xml
[2024-05-18 05:27:01] -rw------- 1 boinc boinc        95 May 18 05:26 pilot_heartbeat.json
[2024-05-18 05:27:01] -rw------- 1 boinc boinc      1042 May 18 05:26 memory_monitor_summary.json
[2024-05-18 05:27:01] -rw------- 1 boinc boinc    276604 May 18 05:26 log.38776125._011657.job.log.tgz.1
[2024-05-18 05:27:01] -rw------- 1 boinc boinc      7726 May 18 05:26 heartbeat.json
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc        27 May 18 05:26 wrapper_checkpoint.txt
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc      8192 May 18 05:26 boinc_mmap_file
[2024-05-18 05:27:01] -rw------- 1 boinc boinc      4223 May 18 05:27 pilotlog.txt
[2024-05-18 05:27:01] -rw------- 1 boinc boinc    702079 May 18 05:27 log.38776125._011657.job.log.1
[2024-05-18 05:27:01] -rw------- 1 boinc boinc       357 May 18 05:27 output.list
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc       620 May 18 05:27 runtime_log
[2024-05-18 05:27:01] -rw------- 1 boinc boinc    993280 May 18 05:27 result.tar.gz
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc     11428 May 18 05:27 runtime_log.err
[2024-05-18 05:27:01] -rw------- 1 boinc boinc       655 May 18 05:27 dJ2LDmQGOR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmIDJKDmg75rQm.diag
[2024-05-18 05:27:01] -rw-r--r-- 1 boinc boinc     21261 May 18 05:27 stderr.txt
[2024-05-18 05:27:01] HITS file was successfully produced:
[2024-05-18 05:27:01] -rw------- 1 boinc boinc 242388980 May 18 05:26 shared/HITS.pool.root.1
[2024-05-18 05:27:01]  *** Contents of shared directory: ***
[2024-05-18 05:27:01] total 822136
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc 597968464 May 18 03:31 ATLAS.root_0
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc     17537 May 18 03:31 start_atlas.sh
[2024-05-18 05:27:01] -rw-r--r-- 2 boinc boinc    480008 May 18 03:31 input.tar.gz
[2024-05-18 05:27:01] -rw------- 1 boinc boinc 242388980 May 18 05:26 HITS.pool.root.1
[2024-05-18 05:27:01] -rw------- 1 boinc boinc    993280 May 18 05:27 result.tar.gz
05:27:03 (1275326): run_atlas exited; CPU time 24392.774208
05:27:03 (1275326): called boinc_finish(0)

</stderr_txt>
]]>

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