Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:50:26 (3466505): wrapper (7.7.26015): starting
23:50:26 (3466505): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 23:50:26] Arguments: --nthreads 4
[2024-05-17 23:50:26] Threads: 4
[2024-05-17 23:50:26] Checking for CVMFS
[2024-05-17 23:50:26] No cvmfs_config command found, will try listing directly
[2024-05-17 23:50:26] CVMFS is ok
[2024-05-17 23:50:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 23:50:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 23:50:26] Further information can be found at the LHC@home message board.
[2024-05-17 23:50:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 23:50:26] Checking for apptainer binary...
[2024-05-17 23:50:26] which: no apptainer in ((null))
[2024-05-17 23:50:26] apptainer is not installed, using version from CVMFS
[2024-05-17 23:50:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 23:50:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-17 23:50:27] apptainer works
[2024-05-17 23:50:27] Set ATHENA_PROC_NUMBER=4
[2024-05-17 23:50:27] Set ATHENA_CORE_NUMBER=4
[2024-05-17 23:50:27] Starting ATLAS job with PandaID=6206558231
[2024-05-17 23:50:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 01:51:34]  *** The last 200 lines of the pilot log: ***
[2024-05-18 01:51:34] 2024-05-17 23:51:12,470 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 01:51:34] 2024-05-17 23:51:12,471 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 01:51:34] 2024-05-17 23:51:12,474 | INFO     | fitting pss+swap vs Time
[2024-05-18 01:51:34] 2024-05-17 23:51:12,475 | INFO     | model: linear, x: [1715982660.0, 1715982721.0, 1715982782.0, 1715982843.0, 1715982904.0, 1715982965.0, 1715983026.0, 1715983087.0, 1715983148.0, 1715983209.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,475 | INFO     | sum of square deviations: 522502820.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,476 | INFO     | sum of deviations: 38716261532.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,476 | INFO     | mean x: 1715986259.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,476 | INFO     | mean y: 2214154.3949579834
[2024-05-18 01:51:34] 2024-05-17 23:51:12,476 | INFO     | -- intersect: -127148435078.00975
[2024-05-18 01:51:34] 2024-05-17 23:51:12,477 | INFO     | intersect: -127148435078.00975
[2024-05-18 01:51:34] 2024-05-17 23:51:12,477 | INFO     | chi2: 4.760911040313417
[2024-05-18 01:51:34] 2024-05-17 23:51:12,477 | INFO     | model: linear, x: [1715982660.0, 1715982721.0, 1715982782.0, 1715982843.0, 1715982904.0, 1715982965.0, 1715983026.0, 1715983087.0, 1715983148.0, 1715983209.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,478 | INFO     | sum of square deviations: 459366752.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,478 | INFO     | sum of deviations: 44986985983.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | mean x: 1715986106.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | mean y: 2228615.2192982454
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | -- intersect: -168048773118.94788
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | intersect: -168048773118.94788
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | chi2: 3.7867123404845437
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | current chi2=3.7867123404845437 (change=20.462442830369294 %)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,479 | INFO     | right removable region: 113
[2024-05-18 01:51:34] 2024-05-17 23:51:12,480 | INFO     | model: linear, x: [1715982965.0, 1715983026.0, 1715983087.0, 1715983148.0, 1715983209.0, 1715983270.0, 1715983331.0, 1715983392.0, 1715983453.0, 1715983514.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,480 | INFO     | sum of square deviations: 459366752.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | sum of deviations: 13071197943.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | mean x: 1715986411.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | mean y: 2275780.289473684
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | -- intersect: -48825807512.640495
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | intersect: -48825807512.640495
[2024-05-18 01:51:34] 2024-05-17 23:51:12,481 | INFO     | chi2: 2.412414494738753
[2024-05-18 01:51:34] 2024-05-17 23:51:12,482 | INFO     | current chi2=2.412414494738753 (change=49.32872145033945 %)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,482 | INFO     | model: linear, x: [1715983270.0, 1715983331.0, 1715983392.0, 1715983453.0, 1715983514.0, 1715983575.0, 1715983636.0, 1715983697.0, 1715983758.0, 1715983819.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,482 | INFO     | sum of square deviations: 401533110.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,483 | INFO     | sum of deviations: -7082061447.999999
[2024-05-18 01:51:34] 2024-05-17 23:51:12,483 | INFO     | mean x: 1715986564.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,483 | INFO     | mean y: 2328948.5045871558
[2024-05-18 01:51:34] 2024-05-17 23:51:12,483 | INFO     | -- intersect: 30268132658.16724
[2024-05-18 01:51:34] 2024-05-17 23:51:12,483 | INFO     | intersect: 30268132658.16724
[2024-05-18 01:51:34] 2024-05-17 23:51:12,484 | INFO     | chi2: 1.0822171676761672
[2024-05-18 01:51:34] 2024-05-17 23:51:12,484 | INFO     | current chi2=1.0822171676761672 (change=55.13966733177984 %)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,484 | INFO     | model: linear, x: [1715983575.0, 1715983636.0, 1715983697.0, 1715983758.0, 1715983819.0, 1715983880.0, 1715983941.0, 1715984002.0, 1715984063.0, 1715984124.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,484 | INFO     | sum of square deviations: 348769330.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,485 | INFO     | sum of deviations: -8064156293.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,485 | INFO     | mean x: 1715986716.5
[2024-05-18 01:51:34] 2024-05-17 23:51:12,485 | INFO     | mean y: 2331583.9903846155
[2024-05-18 01:51:34] 2024-05-17 23:51:12,485 | INFO     | -- intersect: 39678942710.966125
[2024-05-18 01:51:34] 2024-05-17 23:51:12,485 | INFO     | intersect: 39678942710.966125
[2024-05-18 01:51:34] 2024-05-17 23:51:12,486 | INFO     | chi2: 1.0498974172841422
[2024-05-18 01:51:34] 2024-05-17 23:51:12,486 | INFO     | current chi2=1.0498974172841422 (change=2.9864385224478363 %)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,486 | INFO     | left removable region: 30
[2024-05-18 01:51:34] 2024-05-17 23:51:12,486 | INFO     | model: linear, x: [1715984490.0, 1715984551.0, 1715984612.0, 1715984673.0, 1715984734.0, 1715984795.0, 1715984856.0, 1715984917.0, 1715984978.0, 1715985039.0, 1715
[2024-05-18 01:51:34] 2024-05-17 23:51:12,486 | INFO     | sum of square deviations: 177275882.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,487 | INFO     | sum of deviations: 564983342.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,487 | INFO     | mean x: 1715986991.0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,487 | INFO     | mean y: 2349841.5301204817
[2024-05-18 01:51:34] 2024-05-17 23:51:12,487 | INFO     | -- intersect: -5466550124.251484
[2024-05-18 01:51:34] 2024-05-17 23:51:12,487 | INFO     | intersect: -5466550124.251484
[2024-05-18 01:51:34] 2024-05-17 23:51:12,488 | INFO     | chi2: 6.505669494537481e-05
[2024-05-18 01:51:34] 2024-05-17 23:51:12,488 | INFO     | -- intersect: -5466550124.251484
[2024-05-18 01:51:34] 2024-05-17 23:51:12,488 | INFO     | current memory leak: 3.19 B/s (using 83 data points, chi2=0.00)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | ..............................
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . Timing measurements:
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . get job = 0 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . initial setup = 1 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . payload setup = 5 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . stage-in = 0 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . payload execution = 7202 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . stage-out = 0 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,489 | INFO     | . log creation = 0 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,490 | INFO     | ..............................
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | 
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | job summary report
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | --------------------------------------------------
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | PanDA job id: 6206558231
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | task id: 38776104
[2024-05-18 01:51:34] 2024-05-17 23:51:12,579 | INFO     | errors: (none)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | pilot state: finished 
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | transexitcode: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | exeerrorcode: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | exeerrordiag: 
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | exitcode: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | exitmsg: OK
[2024-05-18 01:51:34] 2024-05-17 23:51:12,580 | INFO     | cpuconsumptiontime: 26070 s
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | nevents: 400
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | neventsw: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | pid: 3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | pgrp: 3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | corecount: 4
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | event service: False
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | sizes: {0: 2392212, 4: 2392418, 11: 2392446, 7211: 2419789, 7212: 2428827, 7222: 2428941}
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | --------------------------------------------------
[2024-05-18 01:51:34] 2024-05-17 23:51:12,581 | INFO     | 
[2024-05-18 01:51:34] 2024-05-17 23:51:12,582 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-18 01:51:34] 2024-05-17 23:51:12,611 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,612 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | job 6206558231 has completed (purged errors)
[2024-05-18 01:51:34] 2024-05-17 23:51:12,614 | INFO     | overall cleanup function is called
[2024-05-18 01:51:34] 2024-05-17 23:51:13,622 | INFO     | --- collectZombieJob: --- 10, [3477965]
[2024-05-18 01:51:34] 2024-05-17 23:51:13,622 | INFO     | zombie collector waiting for pid 3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:13,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 01:51:34] 2024-05-17 23:51:14,628 | INFO     | collected zombie processes
[2024-05-18 01:51:34] 2024-05-17 23:51:14,628 | INFO     | will now attempt to kill all subprocesses of pid=3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:14,822 | INFO     | process IDs to be killed: [3477965] (in reverse order)
[2024-05-18 01:51:34] 2024-05-17 23:51:14,964 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 01:51:34] 2024-05-17 23:51:14,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 01:51:34] 2024-05-17 23:51:14,977 | INFO     | did not find any defunct processes belonging to 3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:14,989 | INFO     | did not find any defunct processes belonging to 3477965
[2024-05-18 01:51:34] 2024-05-17 23:51:14,989 | INFO     | ready for new job
[2024-05-18 01:51:34] 2024-05-17 23:51:14,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 01:51:34] 2024-05-17 23:51:14,991 | INFO     | *************************************
[2024-05-18 01:51:34] 2024-05-17 23:51:14,991 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 01:51:34] 2024-05-17 23:51:14,991 | INFO     | *************************************
[2024-05-18 01:51:34] 2024-05-17 23:51:14,991 | INFO     | 
[2024-05-18 01:51:34] 2024-05-17 23:51:14,996 | INFO     | architecture information:
[2024-05-18 01:51:34] 2024-05-17 23:51:14,997 | INFO     | executing command: cat /etc/os-release
[2024-05-18 01:51:34] 2024-05-17 23:51:15,020 | INFO     | cat /etc/os-release:
[2024-05-18 01:51:34] NAME="CentOS Linux"
[2024-05-18 01:51:34] VERSION="7 (Core)"
[2024-05-18 01:51:34] ID="centos"
[2024-05-18 01:51:34] ID_LIKE="rhel fedora"
[2024-05-18 01:51:34] VERSION_ID="7"
[2024-05-18 01:51:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 01:51:34] ANSI_COLOR="0;31"
[2024-05-18 01:51:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 01:51:34] HOME_URL="https://www.centos.org/"
[2024-05-18 01:51:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 01:51:34] 
[2024-05-18 01:51:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 01:51:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 01:51:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 01:51:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 01:51:34] 
[2024-05-18 01:51:34] 2024-05-17 23:51:15,020 | INFO     | *************************************
[2024-05-18 01:51:34] 2024-05-17 23:51:15,524 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-18 01:51:34] 2024-05-17 23:51:15,553 | INFO     | sufficient remaining disk space (582751354880 B)
[2024-05-18 01:51:34] 2024-05-17 23:51:15,553 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 01:51:34] 2024-05-17 23:51:15,554 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 01:51:34] 2024-05-17 23:51:15,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:51:34] 2024-05-17 23:51:15,554 | INFO     | aborting loop
[2024-05-18 01:51:34] 2024-05-17 23:51:15,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 01:51:34] 2024-05-17 23:51:15,656 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 01:51:34] 2024-05-17 23:51:15,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 01:51:34] 2024-05-17 23:51:15,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 01:51:34] 2024-05-17 23:51:15,704 | INFO     | all data control threads have been joined
[2024-05-18 01:51:34] 2024-05-17 23:51:15,805 | INFO     | all job control threads have been joined
[2024-05-18 01:51:34] 2024-05-17 23:51:16,559 | INFO     | [job] job monitor thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:16,560 | INFO     | [job] retrieve thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:16,710 | INFO     | [data] control thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:16,811 | INFO     | [job] control thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:16,829 | INFO     | all payload control threads have been joined
[2024-05-18 01:51:34] 2024-05-17 23:51:17,090 | INFO     | [payload] validate_post thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,280 | INFO     | [data] copytool_in thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,590 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 01:51:34] 2024-05-17 23:51:17,603 | INFO     | [payload] failed_post thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,604 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,659 | INFO     | [data] copytool_out thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,741 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 01:51:34] 2024-05-17 23:51:17,832 | INFO     | [payload] control thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,881 | INFO     | [job] validate thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:17,967 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:18,027 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:18,595 | INFO     | [job] queue monitor thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:21,747 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:25,645 | INFO     | job.realtimelogging is not enabled
[2024-05-18 01:51:34] 2024-05-17 23:51:26,651 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 01:51:34] 2024-05-17 23:51:28,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47251994240064)>', '<ExcThread(monitor, started 47252370380544)>']
[2024-05-18 01:51:34] 2024-05-17 23:51:28,719 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 01:51:34] 2024-05-17 23:51:28,719 | INFO     | [monitor] control thread has ended
[2024-05-18 01:51:34] 2024-05-17 23:51:33,612 | INFO     | all workflow threads have been joined
[2024-05-18 01:51:34] 2024-05-17 23:51:33,613 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 01:51:34] 2024-05-17 23:51:33,613 | INFO     | traces error code: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:33,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 01:51:34] 2024-05-17 23:51:33,726 [wrapper] ==== pilot stdout END ====
[2024-05-18 01:51:34] 2024-05-17 23:51:33,731 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 01:51:34] 2024-05-17 23:51:33,735 [wrapper] pilotpid: 3470933
[2024-05-18 01:51:34] 2024-05-17 23:51:33,739 [wrapper] Pilot exit status: 0
[2024-05-18 01:51:34] 2024-05-17 23:51:33,752 [wrapper] pandaids: 6206558231
[2024-05-18 01:51:34] 2024-05-17 23:51:33,845 [wrapper] cleanup: SIGTERM to supervisor_pilot 3639290 3470934
[2024-05-18 01:51:34] 2024-05-17 23:51:33,849 [wrapper] Test setup, not cleaning
[2024-05-18 01:51:34] 2024-05-17 23:51:33,852 [wrapper] ==== wrapper stdout END ====
[2024-05-18 01:51:34] 2024-05-17 23:51:33,855 [wrapper] ==== wrapper stderr END ====
[2024-05-18 01:51:34] 2024-05-17 23:51:33,861 [wrapper] apfmon messages muted
[2024-05-18 01:51:34]  *** Error codes and diagnostics ***
[2024-05-18 01:51:34]     "exeErrorCode": 0,
[2024-05-18 01:51:34]     "exeErrorDiag": "",
[2024-05-18 01:51:34]     "pilotErrorCode": 0,
[2024-05-18 01:51:34]     "pilotErrorDiag": "",
[2024-05-18 01:51:34]  *** Listing of results directory ***
[2024-05-18 01:51:34] total 816960
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc    467845 May 15 08:25 pilot3.tar.gz
[2024-05-18 01:51:34] -rwx------ 1 boinc boinc     32251 May 15 08:31 runpilot2-wrapper.sh
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc      5633 May 15 08:31 queuedata.json
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc       100 May 17 23:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 01:51:34] -rwxr-xr-x 1 boinc boinc      7986 May 17 23:50 run_atlas
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc       105 May 17 23:50 job.xml
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc      6663 May 17 23:50 init_data.xml
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc 601430556 May 17 23:50 EVNT.38776100._000150.pool.root.1
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc     17537 May 17 23:50 start_atlas.sh
[2024-05-18 01:51:34] drwxrwx--x 2 boinc boinc      4096 May 17 23:50 shared
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc    480000 May 17 23:50 input.tar.gz
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc         0 May 17 23:50 boinc_lockfile
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc      2641 May 17 23:50 pandaJob.out
[2024-05-18 01:51:34] -rw------- 1 boinc boinc       424 May 17 23:50 setup.sh.local
[2024-05-18 01:51:34] -rw------- 1 boinc boinc   1019089 May 17 23:50 agis_schedconf.cvmfs.json
[2024-05-18 01:51:34] -rw------- 1 boinc boinc         0 May 17 23:50 agis_ddmendpoints.agis.ALL.json
[2024-05-18 01:51:34] -rw------- 1 boinc boinc   1324701 May 17 23:50 cric_ddmendpoints.json
[2024-05-18 01:51:34] drwx------ 4 boinc boinc      4096 May 17 23:50 pilot3
[2024-05-18 01:51:34] -rw------- 1 boinc boinc 229615481 May 18 01:50 HITS.38776104._003717.pool.root.1
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc       530 May 18 01:50 boinc_task_state.xml
[2024-05-18 01:51:34] -rw------- 1 boinc boinc        95 May 18 01:50 pilot_heartbeat.json
[2024-05-18 01:51:34] -rw------- 1 boinc boinc      1050 May 18 01:50 memory_monitor_summary.json
[2024-05-18 01:51:34] -rw------- 1 boinc boinc    256481 May 18 01:51 log.38776104._003717.job.log.tgz.1
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc      8192 May 18 01:51 boinc_mmap_file
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc        27 May 18 01:51 wrapper_checkpoint.txt
[2024-05-18 01:51:34] -rw------- 1 boinc boinc      7758 May 18 01:51 heartbeat.json
[2024-05-18 01:51:34] -rw------- 1 boinc boinc      4293 May 18 01:51 pilotlog.txt
[2024-05-18 01:51:34] -rw------- 1 boinc boinc    735228 May 18 01:51 log.38776104._003717.job.log.1
[2024-05-18 01:51:34] -rw------- 1 boinc boinc       357 May 18 01:51 output.list
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc       620 May 18 01:51 runtime_log
[2024-05-18 01:51:34] -rw------- 1 boinc boinc   1013760 May 18 01:51 result.tar.gz
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc     11409 May 18 01:51 runtime_log.err
[2024-05-18 01:51:34] -rw------- 1 boinc boinc       655 May 18 01:51 kWZMDmAMNR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmAAJKDmZfFZun.diag
[2024-05-18 01:51:34] -rw-r--r-- 1 boinc boinc     21246 May 18 01:51 stderr.txt
[2024-05-18 01:51:34] HITS file was successfully produced:
[2024-05-18 01:51:34] -rw------- 1 boinc boinc 229615481 May 18 01:50 shared/HITS.pool.root.1
[2024-05-18 01:51:34]  *** Contents of shared directory: ***
[2024-05-18 01:51:34] total 813064
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc 601430556 May 17 23:50 ATLAS.root_0
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc     17537 May 17 23:50 start_atlas.sh
[2024-05-18 01:51:34] -rw-r--r-- 2 boinc boinc    480000 May 17 23:50 input.tar.gz
[2024-05-18 01:51:34] -rw------- 1 boinc boinc 229615481 May 18 01:50 HITS.pool.root.1
[2024-05-18 01:51:34] -rw------- 1 boinc boinc   1013760 May 18 01:51 result.tar.gz
01:51:35 (3466505): run_atlas exited; CPU time 25842.392578
01:51:35 (3466505): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN