Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:59 (3817016): wrapper (7.7.26015): starting
23:06:59 (3817016): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 23:06:59] Arguments: --nthreads 4
[2024-05-17 23:06:59] Threads: 4
[2024-05-17 23:06:59] Checking for CVMFS
[2024-05-17 23:06:59] No cvmfs_config command found, will try listing directly
[2024-05-17 23:06:59] CVMFS is ok
[2024-05-17 23:06:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 23:06:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 23:06:59] Further information can be found at the LHC@home message board.
[2024-05-17 23:06:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 23:06:59] Checking for apptainer binary...
[2024-05-17 23:06:59] which: no apptainer in ((null))
[2024-05-17 23:06:59] apptainer is not installed, using version from CVMFS
[2024-05-17 23:06:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 23:07:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-17 23:07:00] apptainer works
[2024-05-17 23:07:00] Set ATHENA_PROC_NUMBER=4
[2024-05-17 23:07:00] Set ATHENA_CORE_NUMBER=4
[2024-05-17 23:07:00] Starting ATLAS job with PandaID=6206538329
[2024-05-17 23:07:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:19:12]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:19:12] 2024-05-18 03:18:58,450 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 05:19:12] 2024-05-18 03:18:58,454 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:19:12] 2024-05-18 03:18:58,454 | INFO     | model: linear, x: [1715980052.0, 1715980113.0, 1715980174.0, 1715980235.0, 1715980296.0, 1715980357.0, 1715980418.0, 1715980479.0, 1715980540.0, 1715980601.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,454 | INFO     | sum of square deviations: 15202619927.5
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | sum of deviations: 147597897138.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | mean x: 1715991184.5
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | mean y: 2317573.524590164
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | -- intersect: -16657750990.14409
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | intersect: -16657750990.14409
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | chi2: 5.034859406092434
[2024-05-18 05:19:12] 2024-05-18 03:18:58,457 | INFO     | model: linear, x: [1715980052.0, 1715980113.0, 1715980174.0, 1715980235.0, 1715980296.0, 1715980357.0, 1715980418.0, 1715980479.0, 1715980540.0, 1715980601.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,458 | INFO     | sum of square deviations: 14588031660.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | sum of deviations: 168284751803.00003
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | mean x: 1715991032.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | mean y: 2322643.695290859
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | -- intersect: -19793022722.06147
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | intersect: -19793022722.06147
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | chi2: 4.281666028728424
[2024-05-18 05:19:12] 2024-05-18 03:18:58,460 | INFO     | current chi2=4.281666028728424 (change=14.95957119383728 %)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,461 | INFO     | right removable region: 360
[2024-05-18 05:19:12] 2024-05-18 03:18:58,461 | INFO     | model: linear, x: [1715980357.0, 1715980418.0, 1715980479.0, 1715980540.0, 1715980601.0, 1715980662.0, 1715980723.0, 1715980784.0, 1715980845.0, 1715980906.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,461 | INFO     | sum of square deviations: 14588031660.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,463 | INFO     | sum of deviations: 61375081069.99997
[2024-05-18 05:19:12] 2024-05-18 03:18:58,463 | INFO     | mean x: 1715991337.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,463 | INFO     | mean y: 2338937.6094182828
[2024-05-18 05:19:12] 2024-05-18 03:18:58,463 | INFO     | -- intersect: -7217216783.02799
[2024-05-18 05:19:12] 2024-05-18 03:18:58,463 | INFO     | intersect: -7217216783.02799
[2024-05-18 05:19:12] 2024-05-18 03:18:58,464 | INFO     | chi2: 2.5644588993561155
[2024-05-18 05:19:12] 2024-05-18 03:18:58,464 | INFO     | current chi2=2.5644588993561155 (change=49.0659283106696 %)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,464 | INFO     | model: linear, x: [1715980662.0, 1715980723.0, 1715980784.0, 1715980845.0, 1715980906.0, 1715980967.0, 1715981028.0, 1715981089.0, 1715981150.0, 1715981211.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,464 | INFO     | sum of square deviations: 13990234405.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,466 | INFO     | sum of deviations: -12759499777.499998
[2024-05-18 05:19:12] 2024-05-18 03:18:58,466 | INFO     | mean x: 1715991489.5
[2024-05-18 05:19:12] 2024-05-18 03:18:58,466 | INFO     | mean y: 2357849.7219101125
[2024-05-18 05:19:12] 2024-05-18 03:18:58,466 | INFO     | -- intersect: 1567391886.6528401
[2024-05-18 05:19:12] 2024-05-18 03:18:58,466 | INFO     | intersect: 1567391886.6528401
[2024-05-18 05:19:12] 2024-05-18 03:18:58,467 | INFO     | chi2: 0.8837030264487337
[2024-05-18 05:19:12] 2024-05-18 03:18:58,467 | INFO     | current chi2=0.8837030264487337 (change=65.5403708489688 %)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,467 | INFO     | model: linear, x: [1715980967.0, 1715981028.0, 1715981089.0, 1715981150.0, 1715981211.0, 1715981272.0, 1715981333.0, 1715981394.0, 1715981455.0, 1715981516.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,467 | INFO     | sum of square deviations: 13408995600.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | sum of deviations: -26756805211.000008
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | mean x: 1715991642.0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | mean y: 2361509.3304843307
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | -- intersect: 3426514628.5020695
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | intersect: 3426514628.5020695
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | chi2: 0.7980447011892273
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | current chi2=0.7980447011892273 (change=9.693112131089396 %)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,469 | INFO     | left removable region: 30
[2024-05-18 05:19:12] 2024-05-18 03:18:58,470 | INFO     | model: linear, x: [1715981882.0, 1715981943.0, 1715982004.0, 1715982065.0, 1715982126.0, 1715982187.0, 1715982248.0, 1715982309.0, 1715982370.0, 1715982431.0, 1715
[2024-05-18 05:19:12] 2024-05-18 03:18:58,470 | INFO     | sum of square deviations: 11143362422.5
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | sum of deviations: -4539883367.500003
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | mean x: 1715991916.5
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | mean y: 2367388.3484848486
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | -- intersect: 701474432.0853821
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | intersect: 701474432.0853821
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | chi2: 0.016321231345124358
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | -- intersect: 701474432.0853821
[2024-05-18 05:19:12] 2024-05-18 03:18:58,472 | INFO     | current memory leak: -0.41 B/s (using 330 data points, chi2=0.02)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | ..............................
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . Timing measurements:
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . get job = 0 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . initial setup = 1 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . payload setup = 5 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . stage-in = 0 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . payload execution = 22277 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . stage-out = 1 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | . log creation = 0 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,473 | INFO     | ..............................
[2024-05-18 05:19:12] 2024-05-18 03:18:58,528 | INFO     | 
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | job summary report
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | --------------------------------------------------
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | PanDA job id: 6206538329
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | task id: 38921007
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | errors: (none)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | pilot state: finished 
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | transexitcode: 0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,529 | INFO     | exeerrorcode: 0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | exeerrordiag: 
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | exitcode: 0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | exitmsg: OK
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | cpuconsumptiontime: 86178 s
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | nevents: 400
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | neventsw: 0
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | pid: 3830617
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | pgrp: 3830617
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | corecount: 4
[2024-05-18 05:19:12] 2024-05-18 03:18:58,530 | INFO     | event service: False
[2024-05-18 05:19:12] 2024-05-18 03:18:58,531 | INFO     | sizes: {0: 2392194, 4: 2392400, 11: 2392428, 22287: 2426905, 22288: 2435943, 22295: 2436057}
[2024-05-18 05:19:12] 2024-05-18 03:18:58,531 | INFO     | --------------------------------------------------
[2024-05-18 05:19:12] 2024-05-18 03:18:58,531 | INFO     | 
[2024-05-18 05:19:12] 2024-05-18 03:18:58,531 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,561 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,562 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:19:12] 2024-05-18 03:18:58,562 | INFO     | job 6206538329 has completed (purged errors)
[2024-05-18 05:19:12] 2024-05-18 03:18:58,562 | INFO     | overall cleanup function is called
[2024-05-18 05:19:12] 2024-05-18 03:18:59,570 | INFO     | --- collectZombieJob: --- 10, [3830617]
[2024-05-18 05:19:12] 2024-05-18 03:18:59,570 | INFO     | zombie collector waiting for pid 3830617
[2024-05-18 05:19:12] 2024-05-18 03:18:59,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:19:12] 2024-05-18 03:19:00,576 | INFO     | collected zombie processes
[2024-05-18 05:19:12] 2024-05-18 03:19:00,576 | INFO     | will now attempt to kill all subprocesses of pid=3830617
[2024-05-18 05:19:12] 2024-05-18 03:19:00,753 | INFO     | process IDs to be killed: [3830617] (in reverse order)
[2024-05-18 05:19:12] 2024-05-18 03:19:00,893 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:19:12] 2024-05-18 03:19:00,893 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:19:12] 2024-05-18 03:19:00,908 | INFO     | did not find any defunct processes belonging to 3830617
[2024-05-18 05:19:12] 2024-05-18 03:19:00,920 | INFO     | did not find any defunct processes belonging to 3830617
[2024-05-18 05:19:12] 2024-05-18 03:19:00,920 | INFO     | ready for new job
[2024-05-18 05:19:12] 2024-05-18 03:19:00,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:19:12] 2024-05-18 03:19:00,923 | INFO     | *************************************
[2024-05-18 05:19:12] 2024-05-18 03:19:00,923 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:19:12] 2024-05-18 03:19:00,924 | INFO     | *************************************
[2024-05-18 05:19:12] 2024-05-18 03:19:00,924 | INFO     | 
[2024-05-18 05:19:12] 2024-05-18 03:19:00,929 | INFO     | architecture information:
[2024-05-18 05:19:12] 2024-05-18 03:19:00,930 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:19:12] 2024-05-18 03:19:00,952 | INFO     | cat /etc/os-release:
[2024-05-18 05:19:12] NAME="CentOS Linux"
[2024-05-18 05:19:12] VERSION="7 (Core)"
[2024-05-18 05:19:12] ID="centos"
[2024-05-18 05:19:12] ID_LIKE="rhel fedora"
[2024-05-18 05:19:12] VERSION_ID="7"
[2024-05-18 05:19:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:19:12] ANSI_COLOR="0;31"
[2024-05-18 05:19:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:19:12] HOME_URL="https://www.centos.org/"
[2024-05-18 05:19:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:19:12] 
[2024-05-18 05:19:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:19:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:19:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:19:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:19:12] 
[2024-05-18 05:19:12] 2024-05-18 03:19:00,953 | INFO     | *************************************
[2024-05-18 05:19:12] 2024-05-18 03:19:01,456 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-18 05:19:12] 2024-05-18 03:19:01,480 | INFO     | sufficient remaining disk space (567194681344 B)
[2024-05-18 05:19:12] 2024-05-18 03:19:01,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:19:12] 2024-05-18 03:19:01,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:19:12] 2024-05-18 03:19:01,642 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 05:19:12] 2024-05-18 03:19:01,643 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 05:19:12] 2024-05-18 03:19:01,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:19:12] 2024-05-18 03:19:01,643 | INFO     | will abort loop
[2024-05-18 05:19:12] 2024-05-18 03:19:01,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:19:12] 2024-05-18 03:19:01,985 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:19:12] 2024-05-18 03:19:02,018 | INFO     | all payload control threads have been joined
[2024-05-18 05:19:12] 2024-05-18 03:19:02,119 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:19:12] 2024-05-18 03:19:02,119 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:19:12] 2024-05-18 03:19:02,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:19:12] 2024-05-18 03:19:02,421 | INFO     | all data control threads have been joined
[2024-05-18 05:19:12] 2024-05-18 03:19:02,486 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:02,492 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:02,493 | INFO     | [job] validate thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:02,649 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:02,762 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,013 | INFO     | all job control threads have been joined
[2024-05-18 05:19:12] 2024-05-18 03:19:03,014 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,024 | INFO     | [payload] control thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,089 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,090 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,281 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,426 | INFO     | [data] control thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:19:12] 2024-05-18 03:19:03,898 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:03,950 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:04,019 | INFO     | [job] control thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:04,545 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:05,992 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:19:12] 2024-05-18 03:19:06,640 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47921238672448)>', '<ExcThread(monitor, started 47921412024064)>']
[2024-05-18 05:19:12] 2024-05-18 03:19:07,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:19:12] 2024-05-18 03:19:07,147 | INFO     | [monitor] control thread has ended
[2024-05-18 05:19:12] 2024-05-18 03:19:11,667 | INFO     | all workflow threads have been joined
[2024-05-18 05:19:12] 2024-05-18 03:19:11,667 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:19:12] 2024-05-18 03:19:11,670 | INFO     | traces error code: 0
[2024-05-18 05:19:12] 2024-05-18 03:19:11,671 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:19:12] 2024-05-18 03:19:11,764 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:19:12] 2024-05-18 03:19:11,768 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:19:12] 2024-05-18 03:19:11,772 [wrapper] pilotpid: 3823052
[2024-05-18 05:19:12] 2024-05-18 03:19:11,776 [wrapper] Pilot exit status: 0
[2024-05-18 05:19:12] 2024-05-18 03:19:11,788 [wrapper] pandaids: 6206538329
[2024-05-18 05:19:12] 2024-05-18 03:19:11,878 [wrapper] cleanup: SIGTERM to supervisor_pilot   71137 3823053
[2024-05-18 05:19:12] 2024-05-18 03:19:11,881 [wrapper] Test setup, not cleaning
[2024-05-18 05:19:12] 2024-05-18 03:19:11,884 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:19:12] 2024-05-18 03:19:11,887 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:19:12] 2024-05-18 03:19:11,893 [wrapper] apfmon messages muted
[2024-05-18 05:19:12]  *** Error codes and diagnostics ***
[2024-05-18 05:19:12]     "exeErrorCode": 0,
[2024-05-18 05:19:12]     "exeErrorDiag": "",
[2024-05-18 05:19:12]     "pilotErrorCode": 0,
[2024-05-18 05:19:12]     "pilotErrorDiag": "",
[2024-05-18 05:19:12]  *** Listing of results directory ***
[2024-05-18 05:19:12] total 927724
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc    467845 May 15 07:48 pilot3.tar.gz
[2024-05-18 05:19:12] -rwx------ 1 boinc boinc     32251 May 15 07:57 runpilot2-wrapper.sh
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc      5633 May 15 07:57 queuedata.json
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc       100 May 17 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:19:12] -rwxr-xr-x 1 boinc boinc      7986 May 17 23:06 run_atlas
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc       105 May 17 23:06 job.xml
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc      6663 May 17 23:06 init_data.xml
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc 585627394 May 17 23:06 EVNT.38776201._000035.pool.root.1
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc     17537 May 17 23:06 start_atlas.sh
[2024-05-18 05:19:12] drwxrwx--x 2 boinc boinc      4096 May 17 23:06 shared
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc    479993 May 17 23:06 input.tar.gz
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc         0 May 17 23:06 boinc_lockfile
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc      2625 May 17 23:07 pandaJob.out
[2024-05-18 05:19:12] -rw------- 1 boinc boinc       424 May 17 23:07 setup.sh.local
[2024-05-18 05:19:12] -rw------- 1 boinc boinc   1019073 May 17 23:07 agis_schedconf.cvmfs.json
[2024-05-18 05:19:12] -rw------- 1 boinc boinc   1324701 May 17 23:07 cric_ddmendpoints.json
[2024-05-18 05:19:12] drwx------ 4 boinc boinc      4096 May 17 23:07 pilot3
[2024-05-18 05:19:12] -rw------- 1 boinc boinc        95 May 18 05:18 pilot_heartbeat.json
[2024-05-18 05:19:12] -rw------- 1 boinc boinc 354906062 May 18 05:18 HITS.38921007._000857.pool.root.1
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc       532 May 18 05:18 boinc_task_state.xml
[2024-05-18 05:19:12] -rw------- 1 boinc boinc      1053 May 18 05:18 memory_monitor_summary.json
[2024-05-18 05:19:12] -rw------- 1 boinc boinc         0 May 18 05:18 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:19:12] -rw------- 1 boinc boinc    433313 May 18 05:18 log.38921007._000857.job.log.tgz.1
[2024-05-18 05:19:12] -rw------- 1 boinc boinc      7768 May 18 05:18 heartbeat.json
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc      8192 May 18 05:19 boinc_mmap_file
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc        28 May 18 05:19 wrapper_checkpoint.txt
[2024-05-18 05:19:12] -rw------- 1 boinc boinc      4407 May 18 05:19 pilotlog.txt
[2024-05-18 05:19:12] -rw------- 1 boinc boinc   2528035 May 18 05:19 log.38921007._000857.job.log.1
[2024-05-18 05:19:12] -rw------- 1 boinc boinc       357 May 18 05:19 output.list
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc       620 May 18 05:19 runtime_log
[2024-05-18 05:19:12] -rw------- 1 boinc boinc   2979840 May 18 05:19 result.tar.gz
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc     11410 May 18 05:19 runtime_log.err
[2024-05-18 05:19:12] -rw------- 1 boinc boinc       660 May 18 05:19 kKjMDmxoMR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmD8IKDmoTldrn.diag
[2024-05-18 05:19:12] -rw-r--r-- 1 boinc boinc     21308 May 18 05:19 stderr.txt
[2024-05-18 05:19:12] HITS file was successfully produced:
[2024-05-18 05:19:12] -rw------- 1 boinc boinc 354906062 May 18 05:18 shared/HITS.pool.root.1
[2024-05-18 05:19:12]  *** Contents of shared directory: ***
[2024-05-18 05:19:12] total 921904
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc 585627394 May 17 23:06 ATLAS.root_0
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc     17537 May 17 23:06 start_atlas.sh
[2024-05-18 05:19:12] -rw-r--r-- 2 boinc boinc    479993 May 17 23:06 input.tar.gz
[2024-05-18 05:19:12] -rw------- 1 boinc boinc 354906062 May 18 05:18 HITS.pool.root.1
[2024-05-18 05:19:12] -rw------- 1 boinc boinc   2979840 May 18 05:19 result.tar.gz
05:19:14 (3817016): run_atlas exited; CPU time 85489.547578
05:19:14 (3817016): called boinc_finish(0)

</stderr_txt>
]]>

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