Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:16:05 (1689766): wrapper (7.7.26015): starting
16:16:05 (1689766): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 16:16:05] Arguments: --nthreads 4
[2024-05-19 16:16:05] Threads: 4
[2024-05-19 16:16:05] Checking for CVMFS
[2024-05-19 16:16:05] No cvmfs_config command found, will try listing directly
[2024-05-19 16:16:05] CVMFS is ok
[2024-05-19 16:16:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 16:16:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 16:16:05] Further information can be found at the LHC@home message board.
[2024-05-19 16:16:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 16:16:05] Checking for apptainer binary...
[2024-05-19 16:16:05] which: no apptainer in ((null))
[2024-05-19 16:16:05] apptainer is not installed, using version from CVMFS
[2024-05-19 16:16:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 16:16:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-19 16:16:06] apptainer works
[2024-05-19 16:16:06] Set ATHENA_PROC_NUMBER=4
[2024-05-19 16:16:06] Set ATHENA_CORE_NUMBER=4
[2024-05-19 16:16:06] Starting ATLAS job with PandaID=6206522919
[2024-05-19 16:16:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 18:27:55]  *** The last 200 lines of the pilot log: ***
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | sum of square deviations: 591173875.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | sum of deviations: 31480805915.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | mean x: 1716131953.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | mean y: 2312547.1532258065
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | -- intersect: -91384027814.25291
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | intersect: -91384027814.25291
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | chi2: 3.6021846184449027
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | current chi2=3.6021846184449027 (change=-0.13595437114572234 %)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | right removable region: 123
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | model: linear, x: [1716128507.0, 1716128568.0, 1716128629.0, 1716128690.0, 1716128751.0, 1716128812.0, 1716128873.0, 1716128934.0, 1716128995.0, 1716129056.0, 1716
[2024-05-19 18:27:55] 2024-05-19 16:27:33,788 | INFO     | sum of square deviations: 591173875.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | sum of deviations: 5070449960.499994
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | mean x: 1716132258.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | mean y: 2370433.8467741935
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | -- intersect: -14716755546.3466
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | intersect: -14716755546.3466
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | chi2: 1.303495615544351
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | current chi2=1.303495615544351 (change=63.76455087482793 %)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | model: linear, x: [1716128812.0, 1716128873.0, 1716128934.0, 1716128995.0, 1716129056.0, 1716129117.0, 1716129178.0, 1716129239.0, 1716129300.0, 1716129361.0, 1716
[2024-05-19 18:27:55] 2024-05-19 16:27:33,789 | INFO     | sum of square deviations: 522502820.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | sum of deviations: -15551953049.999996
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | mean x: 1716132411.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | mean y: 2416245.6974789915
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | -- intersect: 51081969621.9937
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | intersect: 51081969621.9937
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | chi2: 0.08636867002669353
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | current chi2=0.08636867002669353 (change=93.37407283946827 %)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | model: linear, x: [1716129117.0, 1716129178.0, 1716129239.0, 1716129300.0, 1716129361.0, 1716129422.0, 1716129483.0, 1716129544.0, 1716129605.0, 1716129666.0, 1716
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | sum of square deviations: 459366752.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,790 | INFO     | sum of deviations: -15274754989.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | mean x: 1716132563.5
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | mean y: 2415415.3421052634
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | -- intersect: 57066850954.710075
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | intersect: 57066850954.710075
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | chi2: 0.056897386952098804
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | current chi2=0.056897386952098804 (change=34.122654737517884 %)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | model: linear, x: [1716129422.0, 1716129483.0, 1716129544.0, 1716129605.0, 1716129666.0, 1716129727.0, 1716129788.0, 1716129849.0, 1716129910.0, 1716129971.0, 1716
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | sum of square deviations: 401533110.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | sum of deviations: -11730644406.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | mean x: 1716132716.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | mean y: 2406049.862385321
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | -- intersect: 50138601904.04484
[2024-05-19 18:27:55] 2024-05-19 16:27:33,791 | INFO     | intersect: 50138601904.04484
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | chi2: 0.04822756840828972
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | current chi2=0.04822756840828972 (change=15.237639210229629 %)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | left removable region: 40
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | model: linear, x: [1716130642.0, 1716130703.0, 1716130764.0, 1716130825.0, 1716130886.0, 1716130947.0, 1716131008.0, 1716131069.0, 1716131130.0, 1716131191.0, 1716
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | sum of square deviations: 177275882.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | sum of deviations: -2112537970.0000005
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | mean x: 1716133143.0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | mean y: 2376614.1325301207
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | -- intersect: 20452966876.39359
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | intersect: 20452966876.39359
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | chi2: 0.007483880333960193
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | -- intersect: 20452966876.39359
[2024-05-19 18:27:55] 2024-05-19 16:27:33,792 | INFO     | current memory leak: -11.92 B/s (using 83 data points, chi2=0.01)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | ..............................
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . Timing measurements:
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . get job = 0 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . initial setup = 1 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . payload setup = 6 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . stage-in = 0 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . payload execution = 7848 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . stage-out = 0 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | . log creation = 0 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,793 | INFO     | ..............................
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | 
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | job summary report
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | --------------------------------------------------
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | PanDA job id: 6206522919
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | task id: 38776125
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | errors: (none)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,854 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | pilot state: finished 
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | transexitcode: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | exeerrorcode: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | exeerrordiag: 
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | exitcode: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | exitmsg: OK
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | cpuconsumptiontime: 28705 s
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | nevents: 400
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | neventsw: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | pid: 1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | pgrp: 1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | corecount: 4
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | event service: False
[2024-05-19 18:27:55] 2024-05-19 16:27:33,855 | INFO     | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 7857: 2420084, 7858: 2429066, 7859: 2429122, 7863: 2429420}
[2024-05-19 18:27:55] 2024-05-19 16:27:33,856 | INFO     | --------------------------------------------------
[2024-05-19 18:27:55] 2024-05-19 16:27:33,856 | INFO     | 
[2024-05-19 18:27:55] 2024-05-19 16:27:33,856 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/1
[2024-05-19 18:27:55] 2024-05-19 16:27:33,884 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,884 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,884 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,884 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,884 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,885 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,886 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,886 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 18:27:55] 2024-05-19 16:27:33,886 | INFO     | job 6206522919 has completed (purged errors)
[2024-05-19 18:27:55] 2024-05-19 16:27:33,886 | INFO     | overall cleanup function is called
[2024-05-19 18:27:55] 2024-05-19 16:27:34,893 | INFO     | --- collectZombieJob: --- 10, [1704310]
[2024-05-19 18:27:55] 2024-05-19 16:27:34,893 | INFO     | zombie collector waiting for pid 1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:34,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 18:27:55] 2024-05-19 16:27:35,128 | WARNING  | process 1704310 is no longer using CPU - aborting
[2024-05-19 18:27:55] 2024-05-19 16:27:35,129 | INFO     | aborting job monitoring since job object (job id=6206522919) has expired
[2024-05-19 18:27:55] 2024-05-19 16:27:35,898 | INFO     | collected zombie processes
[2024-05-19 18:27:55] 2024-05-19 16:27:35,899 | INFO     | will now attempt to kill all subprocesses of pid=1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:36,153 | INFO     | process IDs to be killed: [1704310] (in reverse order)
[2024-05-19 18:27:55] 2024-05-19 16:27:36,304 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 18:27:55] 2024-05-19 16:27:36,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 18:27:55] 2024-05-19 16:27:36,318 | INFO     | did not find any defunct processes belonging to 1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:36,326 | INFO     | did not find any defunct processes belonging to 1704310
[2024-05-19 18:27:55] 2024-05-19 16:27:36,327 | INFO     | ready for new job
[2024-05-19 18:27:55] 2024-05-19 16:27:36,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 18:27:55] 2024-05-19 16:27:36,328 | INFO     | *************************************
[2024-05-19 18:27:55] 2024-05-19 16:27:36,328 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 18:27:55] 2024-05-19 16:27:36,328 | INFO     | *************************************
[2024-05-19 18:27:55] 2024-05-19 16:27:36,328 | INFO     | 
[2024-05-19 18:27:55] 2024-05-19 16:27:36,333 | INFO     | architecture information:
[2024-05-19 18:27:55] 2024-05-19 16:27:36,333 | INFO     | executing command: cat /etc/os-release
[2024-05-19 18:27:55] 2024-05-19 16:27:36,346 | INFO     | cat /etc/os-release:
[2024-05-19 18:27:55] NAME="CentOS Linux"
[2024-05-19 18:27:55] VERSION="7 (Core)"
[2024-05-19 18:27:55] ID="centos"
[2024-05-19 18:27:55] ID_LIKE="rhel fedora"
[2024-05-19 18:27:55] VERSION_ID="7"
[2024-05-19 18:27:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 18:27:55] ANSI_COLOR="0;31"
[2024-05-19 18:27:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 18:27:55] HOME_URL="https://www.centos.org/"
[2024-05-19 18:27:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 18:27:55] 
[2024-05-19 18:27:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 18:27:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 18:27:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 18:27:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 18:27:55] 
[2024-05-19 18:27:55] 2024-05-19 16:27:36,347 | INFO     | *************************************
[2024-05-19 18:27:55] 2024-05-19 16:27:36,849 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/1
[2024-05-19 18:27:55] 2024-05-19 16:27:36,872 | INFO     | sufficient remaining disk space (3110823002112 B)
[2024-05-19 18:27:55] 2024-05-19 16:27:36,872 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 18:27:55] 2024-05-19 16:27:36,872 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 18:27:55] 2024-05-19 16:27:36,873 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 18:27:55] 2024-05-19 16:27:36,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:27:55] 2024-05-19 16:27:36,874 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 18:27:55] 2024-05-19 16:27:36,874 | INFO     | aborting loop
[2024-05-19 18:27:55] 2024-05-19 16:27:36,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 18:27:55] 2024-05-19 16:27:36,875 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 18:27:55] 2024-05-19 16:27:37,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 18:27:55] 2024-05-19 16:27:37,380 | INFO     | all job control threads have been joined
[2024-05-19 18:27:55] 2024-05-19 16:27:37,631 | INFO     | all payload control threads have been joined
[2024-05-19 18:27:55] 2024-05-19 16:27:37,741 | INFO     | all data control threads have been joined
[2024-05-19 18:27:55] 2024-05-19 16:27:37,877 | INFO     | [job] retrieve thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:37,880 | INFO     | [job] job monitor thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:37,887 | INFO     | [payload] failed_post thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,386 | INFO     | [job] control thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,394 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,559 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,603 | INFO     | [job] validate thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,636 | INFO     | [payload] control thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,746 | INFO     | [data] control thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,769 | INFO     | [data] copytool_in thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:38,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:27:55] 2024-05-19 16:27:38,974 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:39,063 | INFO     | [payload] validate_post thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:39,143 | INFO     | [data] copytool_out thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:39,868 | INFO     | [job] queue monitor thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:40,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 18:27:55] 2024-05-19 16:27:44,362 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:46,973 | INFO     | job.realtimelogging is not enabled
[2024-05-19 18:27:55] 2024-05-19 16:27:47,973 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 18:27:55] 2024-05-19 16:27:49,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47699149820992)>', '<ExcThread(monitor, started 47699318970112)>']
[2024-05-19 18:27:55] 2024-05-19 16:27:49,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 18:27:55] 2024-05-19 16:27:49,935 | INFO     | [monitor] control thread has ended
[2024-05-19 18:27:55] 2024-05-19 16:27:54,217 | INFO     | all workflow threads have been joined
[2024-05-19 18:27:55] 2024-05-19 16:27:54,217 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 18:27:55] 2024-05-19 16:27:54,217 | INFO     | traces error code: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:54,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 18:27:55] 2024-05-19 16:27:54,287 [wrapper] ==== pilot stdout END ====
[2024-05-19 18:27:55] 2024-05-19 16:27:54,289 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 18:27:55] 2024-05-19 16:27:54,291 [wrapper] pilotpid: 1694408
[2024-05-19 18:27:55] 2024-05-19 16:27:54,293 [wrapper] Pilot exit status: 0
[2024-05-19 18:27:55] 2024-05-19 16:27:54,301 [wrapper] pandaids: 6206522919
[2024-05-19 18:27:55] 2024-05-19 16:27:54,389 [wrapper] cleanup: SIGTERM to supervisor_pilot 2282186 1694409
[2024-05-19 18:27:55] 2024-05-19 16:27:54,391 [wrapper] Test setup, not cleaning
[2024-05-19 18:27:55] 2024-05-19 16:27:54,393 [wrapper] ==== wrapper stdout END ====
[2024-05-19 18:27:55] 2024-05-19 16:27:54,395 [wrapper] ==== wrapper stderr END ====
[2024-05-19 18:27:55] 2024-05-19 16:27:54,400 [wrapper] apfmon messages muted
[2024-05-19 18:27:55]  *** Error codes and diagnostics ***
[2024-05-19 18:27:55]     "exeErrorCode": 0,
[2024-05-19 18:27:55]     "exeErrorDiag": "",
[2024-05-19 18:27:55]     "pilotErrorCode": 0,
[2024-05-19 18:27:55]     "pilotErrorDiag": "",
[2024-05-19 18:27:55]  *** Listing of results directory ***
[2024-05-19 18:27:55] total 830472
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc    467845 May 15 06:35 pilot3.tar.gz
[2024-05-19 18:27:55] -rwx------ 1 boinc boinc     32251 May 15 06:41 runpilot2-wrapper.sh
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc      5633 May 15 06:41 queuedata.json
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc       100 May 19 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 18:27:55] -rwxr-xr-x 1 boinc boinc      7986 May 19 16:15 run_atlas
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc       105 May 19 16:15 job.xml
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc    480017 May 19 16:16 input.tar.gz
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc      6644 May 19 16:16 init_data.xml
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc 600094738 May 19 16:16 EVNT.38776119._000214.pool.root.1
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc     17537 May 19 16:16 start_atlas.sh
[2024-05-19 18:27:55] drwxrwx--x 2 boinc boinc      4096 May 19 16:16 shared
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc         0 May 19 16:16 boinc_lockfile
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc      2633 May 19 16:16 pandaJob.out
[2024-05-19 18:27:55] -rw------- 1 boinc boinc       424 May 19 16:16 setup.sh.local
[2024-05-19 18:27:55] -rw------- 1 boinc boinc   1014069 May 19 16:16 agis_schedconf.cvmfs.json
[2024-05-19 18:27:55] -rw------- 1 boinc boinc         0 May 19 16:16 agis_ddmendpoints.agis.ALL.json
[2024-05-19 18:27:55] -rw------- 1 boinc boinc   1324701 May 19 16:16 cric_ddmendpoints.json
[2024-05-19 18:27:55] drwx------ 4 boinc boinc      4096 May 19 16:16 pilot3
[2024-05-19 18:27:55] -rw------- 1 boinc boinc 244588124 May 19 18:26 HITS.38776125._011284.pool.root.1
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc       530 May 19 18:27 boinc_task_state.xml
[2024-05-19 18:27:55] -rw------- 1 boinc boinc      1043 May 19 18:27 memory_monitor_summary.json
[2024-05-19 18:27:55] -rw------- 1 boinc boinc    277947 May 19 18:27 log.38776125._011284.job.log.tgz.1
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc      8192 May 19 18:27 boinc_mmap_file
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc        27 May 19 18:27 wrapper_checkpoint.txt
[2024-05-19 18:27:55] -rw------- 1 boinc boinc      7738 May 19 18:27 heartbeat.json
[2024-05-19 18:27:55] -rw------- 1 boinc boinc        95 May 19 18:27 pilot_heartbeat.json
[2024-05-19 18:27:55] -rw------- 1 boinc boinc      4417 May 19 18:27 pilotlog.txt
[2024-05-19 18:27:55] -rw------- 1 boinc boinc    815515 May 19 18:27 log.38776125._011284.job.log.1
[2024-05-19 18:27:55] -rw------- 1 boinc boinc       357 May 19 18:27 output.list
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc       620 May 19 18:27 runtime_log
[2024-05-19 18:27:55] -rw------- 1 boinc boinc   1116160 May 19 18:27 result.tar.gz
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc     11409 May 19 18:27 runtime_log.err
[2024-05-19 18:27:55] -rw------- 1 boinc boinc       657 May 19 18:27 SrvNDmjdLR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmJqNKDmyrIjxm.diag
[2024-05-19 18:27:55] -rw-r--r-- 1 boinc boinc     21272 May 19 18:27 stderr.txt
[2024-05-19 18:27:55] HITS file was successfully produced:
[2024-05-19 18:27:55] -rw------- 1 boinc boinc 244588124 May 19 18:26 shared/HITS.pool.root.1
[2024-05-19 18:27:55]  *** Contents of shared directory: ***
[2024-05-19 18:27:55] total 826480
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc    480017 May 19 16:16 input.tar.gz
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc 600094738 May 19 16:16 ATLAS.root_0
[2024-05-19 18:27:55] -rw-r--r-- 2 boinc boinc     17537 May 19 16:16 start_atlas.sh
[2024-05-19 18:27:55] -rw------- 1 boinc boinc 244588124 May 19 18:26 HITS.pool.root.1
[2024-05-19 18:27:55] -rw------- 1 boinc boinc   1116160 May 19 18:27 result.tar.gz
18:27:57 (1689766): run_atlas exited; CPU time 28448.030993
18:27:57 (1689766): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN