Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:17:01 (2996082): wrapper (7.7.26015): starting
16:17:01 (2996082): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 16:17:01] Arguments: --nthreads 4
[2024-05-17 16:17:01] Threads: 4
[2024-05-17 16:17:01] Checking for CVMFS
[2024-05-17 16:17:01] No cvmfs_config command found, will try listing directly
[2024-05-17 16:17:01] CVMFS is ok
[2024-05-17 16:17:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 16:17:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 16:17:01] Further information can be found at the LHC@home message board.
[2024-05-17 16:17:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 16:17:01] Checking for apptainer binary...
[2024-05-17 16:17:01] which: no apptainer in ((null))
[2024-05-17 16:17:01] apptainer is not installed, using version from CVMFS
[2024-05-17 16:17:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 16:17:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-17 16:17:02] apptainer works
[2024-05-17 16:17:02] Set ATHENA_PROC_NUMBER=4
[2024-05-17 16:17:02] Set ATHENA_CORE_NUMBER=4
[2024-05-17 16:17:02] Starting ATLAS job with PandaID=6206522314
[2024-05-17 16:17:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 18:59:06]  *** The last 200 lines of the pilot log: ***
[2024-05-17 18:59:06] 2024-05-17 16:58:48,701 | WARNING  | GPU info not found in prmon json
[2024-05-17 18:59:06] 2024-05-17 16:58:48,703 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 18:59:06] 2024-05-17 16:58:48,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 18:59:06] 2024-05-17 16:58:48,708 | INFO     | fitting pss+swap vs Time
[2024-05-17 18:59:06] 2024-05-17 16:58:48,709 | INFO     | model: linear, x: [1715955457.0, 1715955518.0, 1715955579.0, 1715955640.0, 1715955701.0, 1715955762.0, 1715955823.0, 1715955884.0, 1715955945.0, 1715956006.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,709 | INFO     | sum of square deviations: 1246386160.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,710 | INFO     | sum of deviations: 18084791694.99993
[2024-05-17 18:59:06] 2024-05-17 16:58:48,710 | INFO     | mean x: 1715960276.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,710 | INFO     | mean y: 2328582.2012578617
[2024-05-17 18:59:06] 2024-05-17 16:58:48,711 | INFO     | -- intersect: -24895881253.789368
[2024-05-17 18:59:06] 2024-05-17 16:58:48,711 | INFO     | intersect: -24895881253.789368
[2024-05-17 18:59:06] 2024-05-17 16:58:48,711 | INFO     | chi2: 4.676061753478723
[2024-05-17 18:59:06] 2024-05-17 16:58:48,711 | INFO     | model: linear, x: [1715955457.0, 1715955518.0, 1715955579.0, 1715955640.0, 1715955701.0, 1715955762.0, 1715955823.0, 1715955884.0, 1715955945.0, 1715956006.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,712 | INFO     | sum of square deviations: 1132458442.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,712 | INFO     | sum of deviations: 27709009476.999985
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | mean x: 1715960123.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | mean y: 2341127.974025974
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | -- intersect: -41983795881.38962
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | intersect: -41983795881.38962
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | chi2: 3.9402321540731187
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | current chi2=3.9402321540731187 (change=15.736096702704769 %)
[2024-05-17 18:59:06] 2024-05-17 16:58:48,713 | INFO     | right removable region: 153
[2024-05-17 18:59:06] 2024-05-17 16:58:48,714 | INFO     | model: linear, x: [1715955762.0, 1715955823.0, 1715955884.0, 1715955945.0, 1715956006.0, 1715956067.0, 1715956128.0, 1715956189.0, 1715956250.0, 1715956311.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,714 | INFO     | sum of square deviations: 1132458442.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,715 | INFO     | sum of deviations: -16333471721.499996
[2024-05-17 18:59:06] 2024-05-17 16:58:48,715 | INFO     | mean x: 1715960428.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,715 | INFO     | mean y: 2374448.9935064935
[2024-05-17 18:59:06] 2024-05-17 16:58:48,715 | INFO     | -- intersect: 24751707477.271732
[2024-05-17 18:59:06] 2024-05-17 16:58:48,715 | INFO     | intersect: 24751707477.271732
[2024-05-17 18:59:06] 2024-05-17 16:58:48,716 | INFO     | chi2: 2.3027452533639736
[2024-05-17 18:59:06] 2024-05-17 16:58:48,716 | INFO     | current chi2=2.3027452533639736 (change=50.75460131272085 %)
[2024-05-17 18:59:06] 2024-05-17 16:58:48,716 | INFO     | model: linear, x: [1715956067.0, 1715956128.0, 1715956189.0, 1715956250.0, 1715956311.0, 1715956372.0, 1715956433.0, 1715956494.0, 1715956555.0, 1715956616.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,716 | INFO     | sum of square deviations: 1025693650.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,717 | INFO     | sum of deviations: -42453890498.00001
[2024-05-17 18:59:06] 2024-05-17 16:58:48,717 | INFO     | mean x: 1715960581.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,717 | INFO     | mean y: 2411765.5704697985
[2024-05-17 18:59:06] 2024-05-17 16:58:48,717 | INFO     | -- intersect: 71026740135.60422
[2024-05-17 18:59:06] 2024-05-17 16:58:48,717 | INFO     | intersect: 71026740135.60422
[2024-05-17 18:59:06] 2024-05-17 16:58:48,718 | INFO     | chi2: 1.0098066408751252
[2024-05-17 18:59:06] 2024-05-17 16:58:48,718 | INFO     | current chi2=1.0098066408751252 (change=56.147705031637976 %)
[2024-05-17 18:59:06] 2024-05-17 16:58:48,718 | INFO     | model: linear, x: [1715956372.0, 1715956433.0, 1715956494.0, 1715956555.0, 1715956616.0, 1715956677.0, 1715956738.0, 1715956799.0, 1715956860.0, 1715956921.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,718 | INFO     | sum of square deviations: 925859220.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,719 | INFO     | sum of deviations: -42705864509.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,719 | INFO     | mean x: 1715960733.5
[2024-05-17 18:59:06] 2024-05-17 16:58:48,719 | INFO     | mean y: 2412040.784722222
[2024-05-17 18:59:06] 2024-05-17 16:58:48,719 | INFO     | -- intersect: 79152227699.0154
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | intersect: 79152227699.0154
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | chi2: 0.962612545464901
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | current chi2=0.962612545464901 (change=4.6735774454131604 %)
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | left removable region: 30
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | model: linear, x: [1715957287.0, 1715957348.0, 1715957409.0, 1715957470.0, 1715957531.0, 1715957592.0, 1715957653.0, 1715957714.0, 1715957775.0, 1715957836.0, 1715
[2024-05-17 18:59:06] 2024-05-17 16:58:48,720 | INFO     | sum of square deviations: 576985702.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,721 | INFO     | sum of deviations: -20253513348.999996
[2024-05-17 18:59:06] 2024-05-17 16:58:48,721 | INFO     | mean x: 1715961008.0
[2024-05-17 18:59:06] 2024-05-17 16:58:48,721 | INFO     | mean y: 2406955.7723577237
[2024-05-17 18:59:06] 2024-05-17 16:58:48,721 | INFO     | -- intersect: 60236549780.14947
[2024-05-17 18:59:06] 2024-05-17 16:58:48,721 | INFO     | intersect: 60236549780.14947
[2024-05-17 18:59:06] 2024-05-17 16:58:48,722 | INFO     | chi2: 0.15252173184054352
[2024-05-17 18:59:06] 2024-05-17 16:58:48,722 | INFO     | -- intersect: 60236549780.14947
[2024-05-17 18:59:06] 2024-05-17 16:58:48,722 | INFO     | current memory leak: -35.10 B/s (using 123 data points, chi2=0.15)
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | ..............................
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . Timing measurements:
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . get job = 0 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . initial setup = 1 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . payload setup = 5 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . stage-in = 0 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . payload execution = 9661 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . stage-out = 0 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,723 | INFO     | . log creation = 0 s
[2024-05-17 18:59:06] 2024-05-17 16:58:48,724 | INFO     | ..............................
[2024-05-17 18:59:06] 2024-05-17 16:58:49,025 | INFO     | 
[2024-05-17 18:59:06] 2024-05-17 16:58:49,025 | INFO     | job summary report
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | --------------------------------------------------
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | PanDA job id: 6206522314
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | task id: 38776125
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | errors: (none)
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | pilot state: finished 
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | transexitcode: 0
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | exeerrorcode: 0
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | exeerrordiag: 
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | exitcode: 0
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | exitmsg: OK
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | cpuconsumptiontime: 35867 s
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | nevents: 400
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | neventsw: 0
[2024-05-17 18:59:06] 2024-05-17 16:58:49,026 | INFO     | pid: 3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | pgrp: 3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | corecount: 4
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | event service: False
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | sizes: {0: 2392032, 1: 2392231, 4: 2392437, 11: 2392465, 9671: 2420964, 9672: 2429946, 9674: 2430130, 9683: 2430300}
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | --------------------------------------------------
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | 
[2024-05-17 18:59:06] 2024-05-17 16:58:49,027 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,056 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 18:59:06] 2024-05-17 16:58:49,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,057 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 18:59:06] 2024-05-17 16:58:49,057 | INFO     | job 6206522314 has completed (purged errors)
[2024-05-17 18:59:06] 2024-05-17 16:58:49,057 | INFO     | overall cleanup function is called
[2024-05-17 18:59:06] 2024-05-17 16:58:50,061 | INFO     | --- collectZombieJob: --- 10, [3007439]
[2024-05-17 18:59:06] 2024-05-17 16:58:50,061 | INFO     | zombie collector waiting for pid 3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:50,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 18:59:06] 2024-05-17 16:58:51,067 | INFO     | collected zombie processes
[2024-05-17 18:59:06] 2024-05-17 16:58:51,067 | INFO     | will now attempt to kill all subprocesses of pid=3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:51,260 | INFO     | process IDs to be killed: [3007439] (in reverse order)
[2024-05-17 18:59:06] 2024-05-17 16:58:51,392 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 18:59:06] 2024-05-17 16:58:51,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 18:59:06] 2024-05-17 16:58:51,401 | INFO     | did not find any defunct processes belonging to 3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:51,409 | INFO     | did not find any defunct processes belonging to 3007439
[2024-05-17 18:59:06] 2024-05-17 16:58:51,410 | INFO     | ready for new job
[2024-05-17 18:59:06] 2024-05-17 16:58:51,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 18:59:06] 2024-05-17 16:58:51,412 | INFO     | *************************************
[2024-05-17 18:59:06] 2024-05-17 16:58:51,412 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 18:59:06] 2024-05-17 16:58:51,412 | INFO     | *************************************
[2024-05-17 18:59:06] 2024-05-17 16:58:51,412 | INFO     | 
[2024-05-17 18:59:06] 2024-05-17 16:58:51,415 | INFO     | architecture information:
[2024-05-17 18:59:06] 2024-05-17 16:58:51,416 | INFO     | executing command: cat /etc/os-release
[2024-05-17 18:59:06] 2024-05-17 16:58:51,432 | INFO     | cat /etc/os-release:
[2024-05-17 18:59:06] NAME="CentOS Linux"
[2024-05-17 18:59:06] VERSION="7 (Core)"
[2024-05-17 18:59:06] ID="centos"
[2024-05-17 18:59:06] ID_LIKE="rhel fedora"
[2024-05-17 18:59:06] VERSION_ID="7"
[2024-05-17 18:59:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 18:59:06] ANSI_COLOR="0;31"
[2024-05-17 18:59:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 18:59:06] HOME_URL="https://www.centos.org/"
[2024-05-17 18:59:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 18:59:06] 
[2024-05-17 18:59:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 18:59:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 18:59:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 18:59:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 18:59:06] 
[2024-05-17 18:59:06] 2024-05-17 16:58:51,432 | INFO     | *************************************
[2024-05-17 18:59:06] 2024-05-17 16:58:51,935 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-17 18:59:06] 2024-05-17 16:58:51,957 | INFO     | sufficient remaining disk space (569402982400 B)
[2024-05-17 18:59:06] 2024-05-17 16:58:51,957 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 18:59:06] 2024-05-17 16:58:51,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 18:59:06] 2024-05-17 16:58:52,143 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 18:59:06] 2024-05-17 16:58:52,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 18:59:06] 2024-05-17 16:58:52,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 18:59:06] 2024-05-17 16:58:52,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:59:06] 2024-05-17 16:58:52,681 | INFO     | aborting loop
[2024-05-17 18:59:06] 2024-05-17 16:58:52,753 | INFO     | all data control threads have been joined
[2024-05-17 18:59:06] 2024-05-17 16:58:52,928 | INFO     | all payload control threads have been joined
[2024-05-17 18:59:06] 2024-05-17 16:58:52,963 | INFO     | [job] retrieve thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:52,990 | INFO     | [payload] failed_post thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 18:59:06] 2024-05-17 16:58:53,107 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,249 | INFO     | [job] validate thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,364 | INFO     | all job control threads have been joined
[2024-05-17 18:59:06] 2024-05-17 16:58:53,471 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,686 | INFO     | [job] job monitor thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,720 | INFO     | [payload] validate_post thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,758 | INFO     | [data] control thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:53,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:59:06] 2024-05-17 16:58:53,932 | INFO     | [payload] control thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:54,123 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:54,129 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:54,215 | INFO     | [data] copytool_in thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:54,370 | INFO     | [job] control thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:54,825 | INFO     | [job] queue monitor thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:55,093 | INFO     | [data] copytool_out thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:58:55,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 18:59:06] 2024-05-17 16:58:59,335 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 18:59:06] 2024-05-17 16:59:00,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47828001702976)>', '<ExcThread(monitor, started 47828170852096)>']
[2024-05-17 18:59:06] 2024-05-17 16:59:01,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 18:59:06] 2024-05-17 16:59:01,188 | INFO     | [monitor] control thread has ended
[2024-05-17 18:59:06] 2024-05-17 16:59:05,664 | INFO     | all workflow threads have been joined
[2024-05-17 18:59:06] 2024-05-17 16:59:05,664 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 18:59:06] 2024-05-17 16:59:05,665 | INFO     | traces error code: 0
[2024-05-17 18:59:06] 2024-05-17 16:59:05,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 18:59:06] 2024-05-17 16:59:05,784 [wrapper] ==== pilot stdout END ====
[2024-05-17 18:59:06] 2024-05-17 16:59:05,787 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 18:59:06] 2024-05-17 16:59:05,790 [wrapper] pilotpid: 3000422
[2024-05-17 18:59:06] 2024-05-17 16:59:05,794 [wrapper] Pilot exit status: 0
[2024-05-17 18:59:06] 2024-05-17 16:59:05,805 [wrapper] pandaids: 6206522314
[2024-05-17 18:59:06] 2024-05-17 16:59:05,885 [wrapper] cleanup: SIGTERM to supervisor_pilot 3309640 3000423
[2024-05-17 18:59:06] 2024-05-17 16:59:05,889 [wrapper] Test setup, not cleaning
[2024-05-17 18:59:06] 2024-05-17 16:59:05,892 [wrapper] ==== wrapper stdout END ====
[2024-05-17 18:59:06] 2024-05-17 16:59:05,895 [wrapper] ==== wrapper stderr END ====
[2024-05-17 18:59:06] 2024-05-17 16:59:05,901 [wrapper] apfmon messages muted
[2024-05-17 18:59:06]  *** Error codes and diagnostics ***
[2024-05-17 18:59:06]     "exeErrorCode": 0,
[2024-05-17 18:59:06]     "exeErrorDiag": "",
[2024-05-17 18:59:06]     "pilotErrorCode": 0,
[2024-05-17 18:59:06]     "pilotErrorDiag": "",
[2024-05-17 18:59:06]  *** Listing of results directory ***
[2024-05-17 18:59:06] total 833868
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc    467845 May 15 06:19 pilot3.tar.gz
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc      5633 May 15 06:26 queuedata.json
[2024-05-17 18:59:06] -rwx------ 1 boinc boinc     32251 May 15 06:26 runpilot2-wrapper.sh
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc       100 May 17 16:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 18:59:06] -rwxr-xr-x 1 boinc boinc      7986 May 17 16:16 run_atlas
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc       105 May 17 16:16 job.xml
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc      6663 May 17 16:17 init_data.xml
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc 601380280 May 17 16:17 EVNT.38776119._000016.pool.root.1
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc     17537 May 17 16:17 start_atlas.sh
[2024-05-17 18:59:06] drwxrwx--x 2 boinc boinc      4096 May 17 16:17 shared
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc    480012 May 17 16:17 input.tar.gz
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc         0 May 17 16:17 boinc_lockfile
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc      2632 May 17 16:17 pandaJob.out
[2024-05-17 18:59:06] -rw------- 1 boinc boinc       424 May 17 16:17 setup.sh.local
[2024-05-17 18:59:06] -rw------- 1 boinc boinc   1019402 May 17 16:17 agis_schedconf.cvmfs.json
[2024-05-17 18:59:06] -rw------- 1 boinc boinc         0 May 17 16:17 agis_ddmendpoints.agis.ALL.json
[2024-05-17 18:59:06] -rw------- 1 boinc boinc   1324701 May 17 16:17 cric_ddmendpoints.json
[2024-05-17 18:59:06] drwx------ 4 boinc boinc      4096 May 17 16:17 pilot3
[2024-05-17 18:59:06] -rw------- 1 boinc boinc 246341336 May 17 18:58 HITS.38776125._011178.pool.root.1
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc       530 May 17 18:58 boinc_task_state.xml
[2024-05-17 18:59:06] -rw------- 1 boinc boinc      1052 May 17 18:58 memory_monitor_summary.json
[2024-05-17 18:59:06] -rw------- 1 boinc boinc        95 May 17 18:58 pilot_heartbeat.json
[2024-05-17 18:59:06] -rw------- 1 boinc boinc    301430 May 17 18:58 log.38776125._011178.job.log.tgz.1
[2024-05-17 18:59:06] -rw------- 1 boinc boinc      7770 May 17 18:58 heartbeat.json
[2024-05-17 18:59:06] -rw------- 1 boinc boinc      4221 May 17 18:59 pilotlog.txt
[2024-05-17 18:59:06] -rw------- 1 boinc boinc   1015482 May 17 18:59 log.38776125._011178.job.log.1
[2024-05-17 18:59:06] -rw------- 1 boinc boinc       357 May 17 18:59 output.list
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc       620 May 17 18:59 runtime_log
[2024-05-17 18:59:06] -rw------- 1 boinc boinc   1331200 May 17 18:59 result.tar.gz
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc     11409 May 17 18:59 runtime_log.err
[2024-05-17 18:59:06] -rw------- 1 boinc boinc       656 May 17 18:59 0ScLDmFPLR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmDpNKDmUjVWOm.diag
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc        27 May 17 18:59 wrapper_checkpoint.txt
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc      8192 May 17 18:59 boinc_mmap_file
[2024-05-17 18:59:06] -rw-r--r-- 1 boinc boinc     21289 May 17 18:59 stderr.txt
[2024-05-17 18:59:06] HITS file was successfully produced:
[2024-05-17 18:59:06] -rw------- 1 boinc boinc 246341336 May 17 18:58 shared/HITS.pool.root.1
[2024-05-17 18:59:06]  *** Contents of shared directory: ***
[2024-05-17 18:59:06] total 829656
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc 601380280 May 17 16:17 ATLAS.root_0
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc     17537 May 17 16:17 start_atlas.sh
[2024-05-17 18:59:06] -rw-r--r-- 2 boinc boinc    480012 May 17 16:17 input.tar.gz
[2024-05-17 18:59:06] -rw------- 1 boinc boinc 246341336 May 17 18:58 HITS.pool.root.1
[2024-05-17 18:59:06] -rw------- 1 boinc boinc   1331200 May 17 18:59 result.tar.gz
18:59:08 (2996082): run_atlas exited; CPU time 35652.799982
18:59:08 (2996082): called boinc_finish(0)

</stderr_txt>
]]>

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