Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:12:41 (979935): wrapper (7.7.26015): starting
17:12:41 (979935): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 17:12:41] Arguments: --nthreads 12
[2024-05-16 17:12:41] Threads: 12
[2024-05-16 17:12:41] Checking for CVMFS
[2024-05-16 17:12:41] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 17:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 17:12:41] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 17:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 17:12:42] 2.11.3.0 11199 10404 95816 132803 2 56 41624830 46080001 911 130560 0 11706348 99.938 1615153 33588 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-16 17:12:42] CVMFS is ok
[2024-05-16 17:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 17:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 17:12:42] Further information can be found at the LHC@home message board.
[2024-05-16 17:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 17:12:42] Checking for apptainer binary...
[2024-05-16 17:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 17:12:42] Running /usr/bin/apptainer --version
[2024-05-16 17:12:42] apptainer version 1.3.1-1.el7
[2024-05-16 17:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 17:12:42] minis01.farm.particle.cz
[2024-05-16 17:12:42] apptainer works
[2024-05-16 17:12:42] Set ATHENA_PROC_NUMBER=12
[2024-05-16 17:12:42] Set ATHENA_CORE_NUMBER=12
[2024-05-16 17:12:42] Starting ATLAS job with PandaID=6206376296
[2024-05-16 17:12:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 19:55:19]  *** The last 200 lines of the pilot log: ***
[2024-05-16 19:55:19] 2024-05-16 17:55:02,912 | INFO     | right removable region: 153
[2024-05-16 19:55:19] 2024-05-16 17:55:02,912 | INFO     | model: linear, x: [1715872702.0, 1715872763.0, 1715872824.0, 1715872885.0, 1715872946.0, 1715873007.0, 1715873068.0, 1715873129.0, 1715873190.0, 1715873251.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,912 | INFO     | sum of square deviations: 1132458442.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,913 | INFO     | sum of deviations: 55295621203.50001
[2024-05-16 19:55:19] 2024-05-16 17:55:02,913 | INFO     | mean x: 1715877368.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,913 | INFO     | mean y: 2713060.7077922076
[2024-05-16 19:55:19] 2024-05-16 17:55:02,913 | INFO     | -- intersect: -83780056742.99243
[2024-05-16 19:55:19] 2024-05-16 17:55:02,913 | INFO     | intersect: -83780056742.99243
[2024-05-16 19:55:19] 2024-05-16 17:55:02,914 | INFO     | chi2: 2.3956670107590203
[2024-05-16 19:55:19] 2024-05-16 17:55:02,914 | INFO     | current chi2=2.3956670107590203 (change=54.10304716771024 %)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,914 | INFO     | model: linear, x: [1715873007.0, 1715873068.0, 1715873129.0, 1715873190.0, 1715873251.0, 1715873312.0, 1715873373.0, 1715873434.0, 1715873495.0, 1715873556.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,914 | INFO     | sum of square deviations: 1025693650.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,915 | INFO     | sum of deviations: 15526679347.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,915 | INFO     | mean x: 1715877521.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,915 | INFO     | mean y: 2769891.3154362417
[2024-05-16 19:55:19] 2024-05-16 17:55:02,915 | INFO     | -- intersect: -25971730455.149864
[2024-05-16 19:55:19] 2024-05-16 17:55:02,916 | INFO     | intersect: -25971730455.149864
[2024-05-16 19:55:19] 2024-05-16 17:55:02,916 | INFO     | chi2: 0.38018741148826823
[2024-05-16 19:55:19] 2024-05-16 17:55:02,916 | INFO     | current chi2=0.38018741148826823 (change=84.13020633582072 %)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,916 | INFO     | model: linear, x: [1715873312.0, 1715873373.0, 1715873434.0, 1715873495.0, 1715873556.0, 1715873617.0, 1715873678.0, 1715873739.0, 1715873800.0, 1715873861.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,916 | INFO     | sum of square deviations: 925859220.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,917 | INFO     | sum of deviations: -4407768.499999985
[2024-05-16 19:55:19] 2024-05-16 17:55:02,917 | INFO     | mean x: 1715877673.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,917 | INFO     | mean y: 2793403.5208333335
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | -- intersect: 10962238.907174855
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | intersect: 10962238.907174855
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | chi2: 0.004775626469219357
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | current chi2=0.004775626469219357 (change=98.74387569790255 %)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | model: linear, x: [1715873617.0, 1715873678.0, 1715873739.0, 1715873800.0, 1715873861.0, 1715873922.0, 1715873983.0, 1715874044.0, 1715874105.0, 1715874166.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,918 | INFO     | sum of square deviations: 832722590.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,919 | INFO     | sum of deviations: -940941348.0000002
[2024-05-16 19:55:19] 2024-05-16 17:55:02,919 | INFO     | mean x: 1715877826.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,919 | INFO     | mean y: 2794916.215827338
[2024-05-16 19:55:19] 2024-05-16 17:55:02,919 | INFO     | -- intersect: 1941664371.648458
[2024-05-16 19:55:19] 2024-05-16 17:55:02,920 | INFO     | intersect: 1941664371.648458
[2024-05-16 19:55:19] 2024-05-16 17:55:02,920 | INFO     | chi2: 0.002854887181596815
[2024-05-16 19:55:19] 2024-05-16 17:55:02,920 | INFO     | current chi2=0.002854887181596815 (change=40.219629822441156 %)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,920 | INFO     | model: linear, x: [1715873922.0, 1715873983.0, 1715874044.0, 1715874105.0, 1715874166.0, 1715874227.0, 1715874288.0, 1715874349.0, 1715874410.0, 1715874471.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,920 | INFO     | sum of square deviations: 746051197.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,921 | INFO     | sum of deviations: -808334210.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,921 | INFO     | mean x: 1715877978.5
[2024-05-16 19:55:19] 2024-05-16 17:55:02,921 | INFO     | mean y: 2794675.395522388
[2024-05-16 19:55:19] 2024-05-16 17:55:02,921 | INFO     | -- intersect: 1861920263.174146
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | intersect: 1861920263.174146
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | chi2: 0.0027835254355600063
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | current chi2=0.0027835254355600063 (change=2.4996345388644747 %)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | left removable region: 50
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | model: linear, x: [1715875447.0, 1715875508.0, 1715875569.0, 1715875630.0, 1715875691.0, 1715875752.0, 1715875813.0, 1715875874.0, 1715875935.0, 1715875996.0, 1715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,922 | INFO     | sum of square deviations: 338804492.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,923 | INFO     | sum of deviations: 215722961.9999997
[2024-05-16 19:55:19] 2024-05-16 17:55:02,923 | INFO     | mean x: 1715878558.0
[2024-05-16 19:55:19] 2024-05-16 17:55:02,923 | INFO     | mean y: 2791045.3883495145
[2024-05-16 19:55:19] 2024-05-16 17:55:02,923 | INFO     | -- intersect: -1089739938.4217715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,923 | INFO     | intersect: -1089739938.4217715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,924 | INFO     | chi2: 0.0017011143265232005
[2024-05-16 19:55:19] 2024-05-16 17:55:02,924 | INFO     | -- intersect: -1089739938.4217715
[2024-05-16 19:55:19] 2024-05-16 17:55:02,924 | INFO     | current memory leak: 0.64 B/s (using 103 data points, chi2=0.00)
[2024-05-16 19:55:19] 2024-05-16 17:55:02,924 | INFO     | ..............................
[2024-05-16 19:55:19] 2024-05-16 17:55:02,924 | INFO     | . Timing measurements:
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . get job = 0 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . initial setup = 1 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . payload setup = 5 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . stage-in = 0 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . payload execution = 9698 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . stage-out = 0 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | . log creation = 0 s
[2024-05-16 19:55:19] 2024-05-16 17:55:02,925 | INFO     | ..............................
[2024-05-16 19:55:19] 2024-05-16 17:55:03,370 | INFO     | 
[2024-05-16 19:55:19] 2024-05-16 17:55:03,370 | INFO     | job summary report
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | --------------------------------------------------
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | PanDA job id: 6206376296
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | task id: 38920995
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | errors: (none)
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 19:55:19] 2024-05-16 17:55:03,371 | INFO     | pilot state: finished 
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | transexitcode: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | exeerrorcode: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | exeerrordiag: 
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | exitcode: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | exitmsg: OK
[2024-05-16 19:55:19] 2024-05-16 17:55:03,372 | INFO     | cpuconsumptiontime: 104207 s
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | nevents: 400
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | neventsw: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | pid: 991085
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | pgrp: 991085
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | corecount: 12
[2024-05-16 19:55:19] 2024-05-16 17:55:03,373 | INFO     | event service: False
[2024-05-16 19:55:19] 2024-05-16 17:55:03,374 | INFO     | sizes: {0: 2392002, 1: 2392201, 5: 2392407, 11: 2392463, 9707: 2420995, 9709: 2429957, 9711: 2430141, 9715: 2430311}
[2024-05-16 19:55:19] 2024-05-16 17:55:03,374 | INFO     | --------------------------------------------------
[2024-05-16 19:55:19] 2024-05-16 17:55:03,374 | INFO     | 
[2024-05-16 19:55:19] 2024-05-16 17:55:03,374 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-16 19:55:19] 2024-05-16 17:55:03,394 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,395 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,395 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,395 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,398 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 19:55:19] 2024-05-16 17:55:03,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,398 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 19:55:19] 2024-05-16 17:55:03,399 | INFO     | job 6206376296 has completed (purged errors)
[2024-05-16 19:55:19] 2024-05-16 17:55:03,399 | INFO     | overall cleanup function is called
[2024-05-16 19:55:19] 2024-05-16 17:55:04,408 | INFO     | --- collectZombieJob: --- 10, [991085]
[2024-05-16 19:55:19] 2024-05-16 17:55:04,408 | INFO     | zombie collector waiting for pid 991085
[2024-05-16 19:55:19] 2024-05-16 17:55:04,408 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 19:55:19] 2024-05-16 17:55:05,413 | INFO     | collected zombie processes
[2024-05-16 19:55:19] 2024-05-16 17:55:05,413 | INFO     | will now attempt to kill all subprocesses of pid=991085
[2024-05-16 19:55:19] 2024-05-16 17:55:05,488 | INFO     | process IDs to be killed: [991085] (in reverse order)
[2024-05-16 19:55:19] 2024-05-16 17:55:05,539 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 19:55:19] 2024-05-16 17:55:05,540 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 19:55:19] 2024-05-16 17:55:05,544 | INFO     | did not find any defunct processes belonging to 991085
[2024-05-16 19:55:19] 2024-05-16 17:55:05,548 | INFO     | did not find any defunct processes belonging to 991085
[2024-05-16 19:55:19] 2024-05-16 17:55:05,548 | INFO     | ready for new job
[2024-05-16 19:55:19] 2024-05-16 17:55:05,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 19:55:19] 2024-05-16 17:55:05,549 | INFO     | *************************************
[2024-05-16 19:55:19] 2024-05-16 17:55:05,550 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 19:55:19] 2024-05-16 17:55:05,550 | INFO     | *************************************
[2024-05-16 19:55:19] 2024-05-16 17:55:05,550 | INFO     | 
[2024-05-16 19:55:19] 2024-05-16 17:55:05,551 | INFO     | architecture information:
[2024-05-16 19:55:19] 2024-05-16 17:55:05,551 | INFO     | executing command: cat /etc/os-release
[2024-05-16 19:55:19] 2024-05-16 17:55:05,565 | INFO     | cat /etc/os-release:
[2024-05-16 19:55:19] NAME="CentOS Linux"
[2024-05-16 19:55:19] VERSION="7 (Core)"
[2024-05-16 19:55:19] ID="centos"
[2024-05-16 19:55:19] ID_LIKE="rhel fedora"
[2024-05-16 19:55:19] VERSION_ID="7"
[2024-05-16 19:55:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 19:55:19] ANSI_COLOR="0;31"
[2024-05-16 19:55:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 19:55:19] HOME_URL="https://www.centos.org/"
[2024-05-16 19:55:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 19:55:19] 
[2024-05-16 19:55:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 19:55:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 19:55:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 19:55:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 19:55:19] 
[2024-05-16 19:55:19] 2024-05-16 17:55:05,565 | INFO     | *************************************
[2024-05-16 19:55:19] 2024-05-16 17:55:06,068 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-16 19:55:19] 2024-05-16 17:55:06,085 | INFO     | sufficient remaining disk space (708543774720 B)
[2024-05-16 19:55:19] 2024-05-16 17:55:06,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 19:55:19] 2024-05-16 17:55:06,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 19:55:19] 2024-05-16 17:55:06,086 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 19:55:19] 2024-05-16 17:55:06,086 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 19:55:19] 2024-05-16 17:55:06,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 19:55:19] 2024-05-16 17:55:06,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 19:55:19] 2024-05-16 17:55:06,393 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 19:55:19] 2024-05-16 17:55:06,393 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 19:55:19] 2024-05-16 17:55:06,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:55:19] 2024-05-16 17:55:06,394 | INFO     | will abort loop
[2024-05-16 19:55:19] 2024-05-16 17:55:06,681 | INFO     | all job control threads have been joined
[2024-05-16 19:55:19] 2024-05-16 17:55:06,734 | INFO     | all payload control threads have been joined
[2024-05-16 19:55:19] 2024-05-16 17:55:07,023 | INFO     | all data control threads have been joined
[2024-05-16 19:55:19] 2024-05-16 17:55:07,091 | INFO     | [job] retrieve thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,139 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,149 | INFO     | [payload] failed_post thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,264 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 19:55:19] 2024-05-16 17:55:07,399 | INFO     | [job] job monitor thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,425 | INFO     | [payload] validate_post thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,687 | INFO     | [job] control thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,707 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,739 | INFO     | [payload] control thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,741 | INFO     | [job] validate thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:07,828 | INFO     | [data] copytool_in thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:08,028 | INFO     | [data] control thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:08,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 19:55:19] 2024-05-16 17:55:08,140 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:08,141 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:09,054 | INFO     | [job] queue monitor thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:09,270 | INFO     | [data] copytool_out thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:09,337 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 19:55:19] 2024-05-16 17:55:13,342 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 19:55:19] 2024-05-16 17:55:13,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798670608192)>', '<ExcThread(monitor, started 139798031365888)>']
[2024-05-16 19:55:19] 2024-05-16 17:55:14,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 19:55:19] 2024-05-16 17:55:14,127 | INFO     | [monitor] control thread has ended
[2024-05-16 19:55:19] 2024-05-16 17:55:18,754 | INFO     | all workflow threads have been joined
[2024-05-16 19:55:19] 2024-05-16 17:55:18,754 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 19:55:19] 2024-05-16 17:55:18,755 | INFO     | traces error code: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:18,755 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 19:55:19] 2024-05-16 17:55:18,853 [wrapper] ==== pilot stdout END ====
[2024-05-16 19:55:19] 2024-05-16 17:55:18,857 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 19:55:19] 2024-05-16 17:55:18,859 [wrapper] pilotpid: 984328
[2024-05-16 19:55:19] 2024-05-16 17:55:18,862 [wrapper] Pilot exit status: 0
[2024-05-16 19:55:19] 2024-05-16 17:55:18,873 [wrapper] pandaids: 6206376296
[2024-05-16 19:55:19] 2024-05-16 17:55:18,938 [wrapper] cleanup: SIGTERM to supervisor_pilot 1130495 984329
[2024-05-16 19:55:19] 2024-05-16 17:55:18,941 [wrapper] Test setup, not cleaning
[2024-05-16 19:55:19] 2024-05-16 17:55:18,943 [wrapper] ==== wrapper stdout END ====
[2024-05-16 19:55:19] 2024-05-16 17:55:18,946 [wrapper] ==== wrapper stderr END ====
[2024-05-16 19:55:19] 2024-05-16 17:55:18,952 [wrapper] apfmon messages muted
[2024-05-16 19:55:19]  *** Error codes and diagnostics ***
[2024-05-16 19:55:19]     "exeErrorCode": 0,
[2024-05-16 19:55:19]     "exeErrorDiag": "",
[2024-05-16 19:55:19]     "pilotErrorCode": 0,
[2024-05-16 19:55:19]     "pilotErrorDiag": "",
[2024-05-16 19:55:19]  *** Listing of results directory ***
[2024-05-16 19:55:19] total 971160
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc    467845 May 15 03:02 pilot3.tar.gz
[2024-05-16 19:55:19] -rwx------ 1 boinc boinc     32251 May 15 03:07 runpilot2-wrapper.sh
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc      5633 May 15 03:07 queuedata.json
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc       100 May 16 17:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 19:55:19] -rwxr-xr-x 1 boinc boinc      7986 May 16 17:12 run_atlas
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc       105 May 16 17:12 job.xml
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc     17537 May 16 17:12 start_atlas.sh
[2024-05-16 19:55:19] drwxrwx--x 2 boinc boinc      4096 May 16 17:12 shared
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc    480001 May 16 17:12 input.tar.gz
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc      6528 May 16 17:12 init_data.xml
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc 636287751 May 16 17:12 EVNT.38776180._000098.pool.root.1
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc         0 May 16 17:12 boinc_lockfile
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc      2612 May 16 17:12 pandaJob.out
[2024-05-16 19:55:19] -rw------- 1 boinc boinc       424 May 16 17:12 setup.sh.local
[2024-05-16 19:55:19] -rw------- 1 boinc boinc   1018974 May 16 17:12 agis_schedconf.cvmfs.json
[2024-05-16 19:55:19] -rw------- 1 boinc boinc         0 May 16 17:12 agis_ddmendpoints.agis.ALL.json
[2024-05-16 19:55:19] -rw------- 1 boinc boinc   1324701 May 16 17:12 cric_ddmendpoints.json
[2024-05-16 19:55:19] drwx------ 4 boinc boinc      4096 May 16 17:12 pilot3
[2024-05-16 19:55:19] -rw------- 1 boinc boinc 351799889 May 16 19:54 HITS.38920995._002435.pool.root.1
[2024-05-16 19:55:19] -rw------- 1 boinc boinc        95 May 16 19:54 pilot_heartbeat.json
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc       531 May 16 19:54 boinc_task_state.xml
[2024-05-16 19:55:19] -rw------- 1 boinc boinc      1037 May 16 19:54 memory_monitor_summary.json
[2024-05-16 19:55:19] -rw------- 1 boinc boinc    417554 May 16 19:54 log.38920995._002435.job.log.tgz.1
[2024-05-16 19:55:19] -rw------- 1 boinc boinc      7717 May 16 19:55 heartbeat.json
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc      8192 May 16 19:55 boinc_mmap_file
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc        28 May 16 19:55 wrapper_checkpoint.txt
[2024-05-16 19:55:19] -rw------- 1 boinc boinc      4522 May 16 19:55 pilotlog.txt
[2024-05-16 19:55:19] -rw------- 1 boinc boinc   1007504 May 16 19:55 log.38920995._002435.job.log.1
[2024-05-16 19:55:19] -rw------- 1 boinc boinc       357 May 16 19:55 output.list
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc       620 May 16 19:55 runtime_log
[2024-05-16 19:55:19] -rw------- 1 boinc boinc   1443840 May 16 19:55 result.tar.gz
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc     11064 May 16 19:55 runtime_log.err
[2024-05-16 19:55:19] -rw------- 1 boinc boinc       663 May 16 19:55 dVKMDmRIIR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmwWYKDmxW9PPm.diag
[2024-05-16 19:55:19] -rw-r--r-- 1 boinc boinc     21652 May 16 19:55 stderr.txt
[2024-05-16 19:55:19] HITS file was successfully produced:
[2024-05-16 19:55:19] -rw------- 1 boinc boinc 351799889 May 16 19:54 shared/HITS.pool.root.1
[2024-05-16 19:55:19]  *** Contents of shared directory: ***
[2024-05-16 19:55:19] total 966844
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc     17537 May 16 17:12 start_atlas.sh
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc    480001 May 16 17:12 input.tar.gz
[2024-05-16 19:55:19] -rw-r--r-- 2 boinc boinc 636287751 May 16 17:12 ATLAS.root_0
[2024-05-16 19:55:19] -rw------- 1 boinc boinc 351799889 May 16 19:54 HITS.pool.root.1
[2024-05-16 19:55:19] -rw------- 1 boinc boinc   1443840 May 16 19:55 result.tar.gz
19:55:20 (979935): run_atlas exited; CPU time 103583.848032
19:55:20 (979935): called boinc_finish(0)

</stderr_txt>
]]>

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