Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:16:39 (1567121): wrapper (7.7.26015): starting
10:16:39 (1567121): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 10:16:39] Arguments: --nthreads 4
[2024-05-17 10:16:39] Threads: 4
[2024-05-17 10:16:39] Checking for CVMFS
[2024-05-17 10:16:39] No cvmfs_config command found, will try listing directly
[2024-05-17 10:16:39] CVMFS is ok
[2024-05-17 10:16:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 10:16:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 10:16:39] Further information can be found at the LHC@home message board.
[2024-05-17 10:16:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 10:16:39] Checking for apptainer binary...
[2024-05-17 10:16:39] which: no apptainer in ((null))
[2024-05-17 10:16:39] apptainer is not installed, using version from CVMFS
[2024-05-17 10:16:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 10:16:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-17 10:16:40] apptainer works
[2024-05-17 10:16:40] Set ATHENA_PROC_NUMBER=4
[2024-05-17 10:16:40] Set ATHENA_CORE_NUMBER=4
[2024-05-17 10:16:40] Starting ATLAS job with PandaID=6206374707
[2024-05-17 10:16:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:03:18]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:03:18] 2024-05-17 15:03:01,496 | INFO     | -- intersect: -10755167727.879538
[2024-05-17 17:03:18] 2024-05-17 15:03:01,496 | INFO     | intersect: -10755167727.879538
[2024-05-17 17:03:18] 2024-05-17 15:03:01,497 | INFO     | chi2: 1.6904101736087789
[2024-05-17 17:03:18] 2024-05-17 15:03:01,497 | INFO     | current chi2=1.6904101736087789 (change=60.53757062913817 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,497 | INFO     | model: linear, x: [1715934445.0, 1715934506.0, 1715934567.0, 1715934628.0, 1715934689.0, 1715934750.0, 1715934811.0, 1715934872.0, 1715934933.0, 1715934994.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,498 | INFO     | sum of square deviations: 18252584090.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,501 | INFO     | sum of deviations: 38469981535.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,501 | INFO     | mean x: 1715946279.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,501 | INFO     | mean y: 2370622.0128534706
[2024-05-17 17:03:18] 2024-05-17 15:03:01,502 | INFO     | -- intersect: -3614236283.764834
[2024-05-17 17:03:18] 2024-05-17 15:03:01,502 | INFO     | intersect: -3614236283.764834
[2024-05-17 17:03:18] 2024-05-17 15:03:01,502 | INFO     | chi2: 0.07154702630839145
[2024-05-17 17:03:18] 2024-05-17 15:03:01,502 | INFO     | current chi2=0.07154702630839145 (change=95.76747540772018 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,503 | INFO     | model: linear, x: [1715934750.0, 1715934811.0, 1715934872.0, 1715934933.0, 1715934994.0, 1715935055.0, 1715935116.0, 1715935177.0, 1715935238.0, 1715935299.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,503 | INFO     | sum of square deviations: 17557761760.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,506 | INFO     | sum of deviations: 23591793767.5
[2024-05-17 17:03:18] 2024-05-17 15:03:01,506 | INFO     | mean x: 1715946431.5
[2024-05-17 17:03:18] 2024-05-17 15:03:01,506 | INFO     | mean y: 2373875.8984375
[2024-05-17 17:03:18] 2024-05-17 15:03:01,506 | INFO     | -- intersect: -2303287567.819977
[2024-05-17 17:03:18] 2024-05-17 15:03:01,507 | INFO     | intersect: -2303287567.819977
[2024-05-17 17:03:18] 2024-05-17 15:03:01,507 | INFO     | chi2: 0.004167484517381282
[2024-05-17 17:03:18] 2024-05-17 15:03:01,507 | INFO     | current chi2=0.004167484517381282 (change=94.17518137033672 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,507 | INFO     | model: linear, x: [1715935055.0, 1715935116.0, 1715935177.0, 1715935238.0, 1715935299.0, 1715935360.0, 1715935421.0, 1715935482.0, 1715935543.0, 1715935604.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,508 | INFO     | sum of square deviations: 16880800230.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,511 | INFO     | sum of deviations: 20300985013.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,511 | INFO     | mean x: 1715946584.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,512 | INFO     | mean y: 2374616.0158311347
[2024-05-17 17:03:18] 2024-05-17 15:03:01,512 | INFO     | -- intersect: -2061236433.8314512
[2024-05-17 17:03:18] 2024-05-17 15:03:01,512 | INFO     | intersect: -2061236433.8314512
[2024-05-17 17:03:18] 2024-05-17 15:03:01,512 | INFO     | chi2: 0.002455160123053923
[2024-05-17 17:03:18] 2024-05-17 15:03:01,512 | INFO     | current chi2=0.002455160123053923 (change=41.08772059466055 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,513 | INFO     | model: linear, x: [1715935360.0, 1715935421.0, 1715935482.0, 1715935543.0, 1715935604.0, 1715935665.0, 1715935726.0, 1715935787.0, 1715935848.0, 1715935909.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,513 | INFO     | sum of square deviations: 16221466937.5
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | sum of deviations: 18011069504.499996
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | mean x: 1715946736.5
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | mean y: 2375145.3663101606
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | -- intersect: -1902880159.6070254
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | intersect: -1902880159.6070254
[2024-05-17 17:03:18] 2024-05-17 15:03:01,517 | INFO     | chi2: 0.0018097359939085332
[2024-05-17 17:03:18] 2024-05-17 15:03:01,518 | INFO     | current chi2=0.0018097359939085332 (change=26.288473940451595 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,518 | INFO     | model: linear, x: [1715935665.0, 1715935726.0, 1715935787.0, 1715935848.0, 1715935909.0, 1715935970.0, 1715936031.0, 1715936092.0, 1715936153.0, 1715936214.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,518 | INFO     | sum of square deviations: 15579529320.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,521 | INFO     | sum of deviations: 16221589761.000006
[2024-05-17 17:03:18] 2024-05-17 15:03:01,521 | INFO     | mean x: 1715946889.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | mean y: 2375570.184281843
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | -- intersect: -1784288578.2177453
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | intersect: -1784288578.2177453
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | chi2: 0.0014635346112163096
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | current chi2=0.0014635346112163096 (change=19.12993850249525 %)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,522 | INFO     | left removable region: 60
[2024-05-17 17:03:18] 2024-05-17 15:03:01,523 | INFO     | model: linear, x: [1715937495.0, 1715937556.0, 1715937617.0, 1715937678.0, 1715937739.0, 1715937800.0, 1715937861.0, 1715937922.0, 1715937983.0, 1715938044.0, 1715
[2024-05-17 17:03:18] 2024-05-17 15:03:01,523 | INFO     | sum of square deviations: 11450045382.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | sum of deviations: 10539961738.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | mean x: 1715947621.0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | mean y: 2376875.4954954954
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | -- intersect: -1577182127.666552
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | intersect: -1577182127.666552
[2024-05-17 17:03:18] 2024-05-17 15:03:01,526 | INFO     | chi2: 0.0010764626399745454
[2024-05-17 17:03:18] 2024-05-17 15:03:01,527 | INFO     | -- intersect: -1577182127.666552
[2024-05-17 17:03:18] 2024-05-17 15:03:01,527 | INFO     | current memory leak: 0.92 B/s (using 333 data points, chi2=0.00)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,527 | INFO     | ..............................
[2024-05-17 17:03:18] 2024-05-17 15:03:01,527 | INFO     | . Timing measurements:
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . get job = 0 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . initial setup = 1 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . payload setup = 5 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . stage-in = 0 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . payload execution = 24338 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . stage-out = 1 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | . log creation = 0 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,528 | INFO     | ..............................
[2024-05-17 17:03:18] 2024-05-17 15:03:01,651 | INFO     | 
[2024-05-17 17:03:18] 2024-05-17 15:03:01,651 | INFO     | job summary report
[2024-05-17 17:03:18] 2024-05-17 15:03:01,651 | INFO     | --------------------------------------------------
[2024-05-17 17:03:18] 2024-05-17 15:03:01,651 | INFO     | PanDA job id: 6206374707
[2024-05-17 17:03:18] 2024-05-17 15:03:01,651 | INFO     | task id: 38920995
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | errors: (none)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | pilot state: finished 
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | transexitcode: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | exeerrorcode: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | exeerrordiag: 
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | exitcode: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | exitmsg: OK
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | cpuconsumptiontime: 94697 s
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | nevents: 400
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | neventsw: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:01,652 | INFO     | pid: 1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | pgrp: 1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | corecount: 4
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | event service: False
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | sizes: {0: 2391226, 1: 2392161, 5: 2392367, 12: 2392423, 24348: 2427496, 24349: 2436480, 24352: 2436664, 24358: 2436834}
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | --------------------------------------------------
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | 
[2024-05-17 17:03:18] 2024-05-17 15:03:01,653 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/1
[2024-05-17 17:03:18] 2024-05-17 15:03:01,675 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,678 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:03:18] 2024-05-17 15:03:01,678 | INFO     | job 6206374707 has completed (purged errors)
[2024-05-17 17:03:18] 2024-05-17 15:03:01,678 | INFO     | overall cleanup function is called
[2024-05-17 17:03:18] 2024-05-17 15:03:02,686 | INFO     | --- collectZombieJob: --- 10, [1579420]
[2024-05-17 17:03:18] 2024-05-17 15:03:02,686 | INFO     | zombie collector waiting for pid 1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:02,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:03:18] 2024-05-17 15:03:03,691 | INFO     | collected zombie processes
[2024-05-17 17:03:18] 2024-05-17 15:03:03,691 | INFO     | will now attempt to kill all subprocesses of pid=1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:03,926 | INFO     | process IDs to be killed: [1579420] (in reverse order)
[2024-05-17 17:03:18] 2024-05-17 15:03:04,085 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:03:18] 2024-05-17 15:03:04,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:03:18] 2024-05-17 15:03:04,100 | INFO     | did not find any defunct processes belonging to 1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:04,112 | INFO     | did not find any defunct processes belonging to 1579420
[2024-05-17 17:03:18] 2024-05-17 15:03:04,112 | INFO     | ready for new job
[2024-05-17 17:03:18] 2024-05-17 15:03:04,112 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:03:18] 2024-05-17 15:03:04,114 | INFO     | *************************************
[2024-05-17 17:03:18] 2024-05-17 15:03:04,114 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:03:18] 2024-05-17 15:03:04,114 | INFO     | *************************************
[2024-05-17 17:03:18] 2024-05-17 15:03:04,114 | INFO     | 
[2024-05-17 17:03:18] 2024-05-17 15:03:04,122 | INFO     | architecture information:
[2024-05-17 17:03:18] 2024-05-17 15:03:04,122 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:03:18] 2024-05-17 15:03:04,144 | INFO     | cat /etc/os-release:
[2024-05-17 17:03:18] NAME="CentOS Linux"
[2024-05-17 17:03:18] VERSION="7 (Core)"
[2024-05-17 17:03:18] ID="centos"
[2024-05-17 17:03:18] ID_LIKE="rhel fedora"
[2024-05-17 17:03:18] VERSION_ID="7"
[2024-05-17 17:03:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:03:18] ANSI_COLOR="0;31"
[2024-05-17 17:03:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:03:18] HOME_URL="https://www.centos.org/"
[2024-05-17 17:03:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:03:18] 
[2024-05-17 17:03:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:03:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:03:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:03:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:03:18] 
[2024-05-17 17:03:18] 2024-05-17 15:03:04,145 | INFO     | *************************************
[2024-05-17 17:03:18] 2024-05-17 15:03:04,647 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/1
[2024-05-17 17:03:18] 2024-05-17 15:03:04,663 | INFO     | sufficient remaining disk space (3080504475648 B)
[2024-05-17 17:03:18] 2024-05-17 15:03:04,663 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:03:18] 2024-05-17 15:03:04,664 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:03:18] 2024-05-17 15:03:04,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:03:18] 2024-05-17 15:03:04,856 | INFO     | all job control threads have been joined
[2024-05-17 17:03:18] 2024-05-17 15:03:04,909 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:03:18] 2024-05-17 15:03:04,910 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:03:18] 2024-05-17 15:03:04,910 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:03:18] 2024-05-17 15:03:05,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:03:18] 2024-05-17 15:03:05,064 | INFO     | aborting loop
[2024-05-17 17:03:18] 2024-05-17 15:03:05,555 | INFO     | all data control threads have been joined
[2024-05-17 17:03:18] 2024-05-17 15:03:05,669 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:05,829 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:05,861 | INFO     | [job] control thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:05,897 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:05,946 | INFO     | all payload control threads have been joined
[2024-05-17 17:03:18] 2024-05-17 15:03:05,986 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,069 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,489 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,555 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,560 | INFO     | [data] control thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:03:18] 2024-05-17 15:03:06,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:03:18] 2024-05-17 15:03:06,661 | INFO     | [job] validate thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,669 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,772 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:06,951 | INFO     | [payload] control thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:07,046 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:07,637 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:10,612 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:03:18] 2024-05-17 15:03:11,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47467972822080)>', '<ExcThread(monitor, started 47468148274944)>']
[2024-05-17 17:03:18] 2024-05-17 15:03:12,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:03:18] 2024-05-17 15:03:12,948 | INFO     | [monitor] control thread has ended
[2024-05-17 17:03:18] 2024-05-17 15:03:16,994 | INFO     | all workflow threads have been joined
[2024-05-17 17:03:18] 2024-05-17 15:03:16,994 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:03:18] 2024-05-17 15:03:16,994 | INFO     | traces error code: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:16,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:03:18] 2024-05-17 15:03:17,086 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:03:18] 2024-05-17 15:03:17,088 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:03:18] 2024-05-17 15:03:17,090 [wrapper] pilotpid: 1571761
[2024-05-17 17:03:18] 2024-05-17 15:03:17,094 [wrapper] Pilot exit status: 0
[2024-05-17 17:03:18] 2024-05-17 15:03:17,117 [wrapper] pandaids: 6206374707
[2024-05-17 17:03:18] 2024-05-17 15:03:17,225 [wrapper] cleanup: SIGTERM to supervisor_pilot 3467097 1571762
[2024-05-17 17:03:18] 2024-05-17 15:03:17,230 [wrapper] Test setup, not cleaning
[2024-05-17 17:03:18] 2024-05-17 15:03:17,232 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:03:18] 2024-05-17 15:03:17,234 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:03:18] 2024-05-17 15:03:17,239 [wrapper] apfmon messages muted
[2024-05-17 17:03:18]  *** Error codes and diagnostics ***
[2024-05-17 17:03:18]     "exeErrorCode": 0,
[2024-05-17 17:03:18]     "exeErrorDiag": "",
[2024-05-17 17:03:18]     "pilotErrorCode": 0,
[2024-05-17 17:03:18]     "pilotErrorDiag": "",
[2024-05-17 17:03:18]  *** Listing of results directory ***
[2024-05-17 17:03:18] total 978448
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc    467845 May 15 02:27 pilot3.tar.gz
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc      5633 May 15 02:48 queuedata.json
[2024-05-17 17:03:18] -rwx------ 1 boinc boinc     32251 May 15 02:49 runpilot2-wrapper.sh
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc       100 May 17 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:03:18] -rwxr-xr-x 1 boinc boinc      7986 May 17 10:16 run_atlas
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc       105 May 17 10:16 job.xml
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc      6646 May 17 10:16 init_data.xml
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc 631808010 May 17 10:16 EVNT.38776180._000091.pool.root.1
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc     17537 May 17 10:16 start_atlas.sh
[2024-05-17 17:03:18] drwxrwx--x 2 boinc boinc      4096 May 17 10:16 shared
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc    480002 May 17 10:16 input.tar.gz
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc         0 May 17 10:16 boinc_lockfile
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc      2611 May 17 10:16 pandaJob.out
[2024-05-17 17:03:18] -rw------- 1 boinc boinc       424 May 17 10:16 setup.sh.local
[2024-05-17 17:03:18] -rw------- 1 boinc boinc   1019364 May 17 10:16 agis_schedconf.cvmfs.json
[2024-05-17 17:03:18] -rw------- 1 boinc boinc   1324701 May 17 10:16 cric_ddmendpoints.json
[2024-05-17 17:03:18] drwx------ 4 boinc boinc      4096 May 17 10:16 pilot3
[2024-05-17 17:03:18] -rw------- 1 boinc boinc 359847840 May 17 17:02 HITS.38920995._002258.pool.root.1
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc       532 May 17 17:02 boinc_task_state.xml
[2024-05-17 17:03:18] -rw------- 1 boinc boinc      1044 May 17 17:02 memory_monitor_summary.json
[2024-05-17 17:03:18] -rw------- 1 boinc boinc         0 May 17 17:02 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:03:18] -rw------- 1 boinc boinc    459921 May 17 17:02 log.38920995._002258.job.log.tgz.1
[2024-05-17 17:03:18] -rw------- 1 boinc boinc        95 May 17 17:02 pilot_heartbeat.json
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc      8192 May 17 17:02 boinc_mmap_file
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc        28 May 17 17:02 wrapper_checkpoint.txt
[2024-05-17 17:03:18] -rw------- 1 boinc boinc      7720 May 17 17:03 heartbeat.json
[2024-05-17 17:03:18] -rw------- 1 boinc boinc      4223 May 17 17:03 pilotlog.txt
[2024-05-17 17:03:18] -rw------- 1 boinc boinc   2906027 May 17 17:03 log.38920995._002258.job.log.1
[2024-05-17 17:03:18] -rw------- 1 boinc boinc       357 May 17 17:03 output.list
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc       620 May 17 17:03 runtime_log
[2024-05-17 17:03:18] -rw------- 1 boinc boinc   3389440 May 17 17:03 result.tar.gz
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc     11429 May 17 17:03 runtime_log.err
[2024-05-17 17:03:18] -rw------- 1 boinc boinc       658 May 17 17:03 l7LKDmO1HR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmxYNKDmBNGqUo.diag
[2024-05-17 17:03:18] -rw-r--r-- 1 boinc boinc     21366 May 17 17:03 stderr.txt
[2024-05-17 17:03:18] HITS file was successfully produced:
[2024-05-17 17:03:18] -rw------- 1 boinc boinc 359847840 May 17 17:02 shared/HITS.pool.root.1
[2024-05-17 17:03:18]  *** Contents of shared directory: ***
[2024-05-17 17:03:18] total 972232
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc 631808010 May 17 10:16 ATLAS.root_0
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc     17537 May 17 10:16 start_atlas.sh
[2024-05-17 17:03:18] -rw-r--r-- 2 boinc boinc    480002 May 17 10:16 input.tar.gz
[2024-05-17 17:03:18] -rw------- 1 boinc boinc 359847840 May 17 17:02 HITS.pool.root.1
[2024-05-17 17:03:18] -rw------- 1 boinc boinc   3389440 May 17 17:03 result.tar.gz
17:03:20 (1567121): run_atlas exited; CPU time 94179.767804
17:03:20 (1567121): called boinc_finish(0)

</stderr_txt>
]]>

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