Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:01:09 (1775384): wrapper (7.7.26015): starting
16:01:09 (1775384): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 16:01:09] Arguments: --nthreads 4
[2024-05-18 16:01:09] Threads: 4
[2024-05-18 16:01:09] Checking for CVMFS
[2024-05-18 16:01:09] No cvmfs_config command found, will try listing directly
[2024-05-18 16:01:09] CVMFS is ok
[2024-05-18 16:01:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 16:01:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 16:01:09] Further information can be found at the LHC@home message board.
[2024-05-18 16:01:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 16:01:09] Checking for apptainer binary...
[2024-05-18 16:01:09] which: no apptainer in ((null))
[2024-05-18 16:01:09] apptainer is not installed, using version from CVMFS
[2024-05-18 16:01:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 16:01:10] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-18 16:01:10] apptainer works
[2024-05-18 16:01:10] Set ATHENA_PROC_NUMBER=4
[2024-05-18 16:01:10] Set ATHENA_CORE_NUMBER=4
[2024-05-18 16:01:10] Starting ATLAS job with PandaID=6206320008
[2024-05-18 16:01:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 19:08:59]  *** The last 200 lines of the pilot log: ***
[2024-05-18 19:08:59] 2024-05-18 17:08:45,392 | INFO     | current chi2=3.631722752222521 (change=0.11216355339394286 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,393 | INFO     | right removable region: 178
[2024-05-18 19:08:59] 2024-05-18 17:08:45,393 | INFO     | model: linear, x: [1716041208.0, 1716041269.0, 1716041330.0, 1716041391.0, 1716041452.0, 1716041513.0, 1716041574.0, 1716041635.0, 1716041696.0, 1716041757.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,393 | INFO     | sum of square deviations: 1778377530.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,393 | INFO     | sum of deviations: 44432526148.00001
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | mean x: 1716046637.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | mean y: 2307410.223463687
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | -- intersect: -42872889663.195465
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | intersect: -42872889663.195465
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | chi2: 1.5561078017073429
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | current chi2=1.5561078017073429 (change=57.20041088072932 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | model: linear, x: [1716041513.0, 1716041574.0, 1716041635.0, 1716041696.0, 1716041757.0, 1716041818.0, 1716041879.0, 1716041940.0, 1716042001.0, 1716042062.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,394 | INFO     | sum of square deviations: 1633472487.5
[2024-05-18 19:08:59] 2024-05-18 17:08:45,395 | INFO     | sum of deviations: 10225479959.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,395 | INFO     | mean x: 1716046789.5
[2024-05-18 19:08:59] 2024-05-18 17:08:45,395 | INFO     | mean y: 2343449.1379310344
[2024-05-18 19:08:59] 2024-05-18 17:08:45,395 | INFO     | -- intersect: -10740048717.867294
[2024-05-18 19:08:59] 2024-05-18 17:08:45,395 | INFO     | intersect: -10740048717.867294
[2024-05-18 19:08:59] 2024-05-18 17:08:45,396 | INFO     | chi2: 0.06296535486139061
[2024-05-18 19:08:59] 2024-05-18 17:08:45,396 | INFO     | current chi2=0.06296535486139061 (change=95.95366369911481 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,396 | INFO     | model: linear, x: [1716041818.0, 1716041879.0, 1716041940.0, 1716042001.0, 1716042062.0, 1716042123.0, 1716042184.0, 1716042245.0, 1716042306.0, 1716042367.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,396 | INFO     | sum of square deviations: 1496660620.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | sum of deviations: 5047314399.000001
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | mean x: 1716046942.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | mean y: 2349139.923076923
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | -- intersect: -5784820191.569403
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | intersect: -5784820191.569403
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | chi2: 0.0018971009474975894
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | current chi2=0.0018971009474975894 (change=96.98707177673533 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | model: linear, x: [1716042123.0, 1716042184.0, 1716042245.0, 1716042306.0, 1716042367.0, 1716042428.0, 1716042489.0, 1716042550.0, 1716042611.0, 1716042672.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,397 | INFO     | sum of square deviations: 1367709365.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | sum of deviations: 3831470999.9999995
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | mean x: 1716047094.5
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | mean y: 2350575.2073170734
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | -- intersect: -4804946095.756845
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | intersect: -4804946095.756845
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | chi2: 0.0009161799946497839
[2024-05-18 19:08:59] 2024-05-18 17:08:45,398 | INFO     | current chi2=0.0009161799946497839 (change=51.7063129477485 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | model: linear, x: [1716042428.0, 1716042489.0, 1716042550.0, 1716042611.0, 1716042672.0, 1716042733.0, 1716042794.0, 1716042855.0, 1716042916.0, 1716042977.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | sum of square deviations: 1246386160.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | sum of deviations: 3194188628.0000005
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | mean x: 1716047247.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | mean y: 2351372.4025157234
[2024-05-18 19:08:59] 2024-05-18 17:08:45,399 | INFO     | -- intersect: -4395465915.201279
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | intersect: -4395465915.201279
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | chi2: 0.0007138316347427965
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | current chi2=0.0007138316347427965 (change=22.08609237143805 %)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | left removable region: 50
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | model: linear, x: [1716043953.0, 1716044014.0, 1716044075.0, 1716044136.0, 1716044197.0, 1716044258.0, 1716044319.0, 1716044380.0, 1716044441.0, 1716044502.0, 1716
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | sum of square deviations: 650252192.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,400 | INFO     | sum of deviations: 1024393862.0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | mean x: 1716047826.5
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | mean y: 2354350.859375
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | -- intersect: -2701071922.81175
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | intersect: -2701071922.81175
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | chi2: 0.00024512219998138704
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | -- intersect: -2701071922.81175
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | current memory leak: 1.58 B/s (using 128 data points, chi2=0.00)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | ..............................
[2024-05-18 19:08:59] 2024-05-18 17:08:45,401 | INFO     | . Timing measurements:
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . get job = 0 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . initial setup = 1 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . payload setup = 4 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . stage-in = 0 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . payload execution = 11217 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . stage-out = 0 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | . log creation = 0 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,402 | INFO     | ..............................
[2024-05-18 19:08:59] 2024-05-18 17:08:45,461 | INFO     | 
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | job summary report
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | --------------------------------------------------
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | PanDA job id: 6206320008
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | task id: 38776125
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | errors: (none)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | pilot state: finished 
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | transexitcode: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | exeerrorcode: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | exeerrordiag: 
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | exitcode: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | exitmsg: OK
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | cpuconsumptiontime: 42104 s
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | nevents: 400
[2024-05-18 19:08:59] 2024-05-18 17:08:45,462 | INFO     | neventsw: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | pid: 1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | pgrp: 1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | corecount: 4
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | event service: False
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | sizes: {0: 2392205, 4: 2392411, 11: 2392439, 11225: 2421662, 11226: 2421661, 11227: 2430699, 11228: 2430883, 11231: 2431053}
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | --------------------------------------------------
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | 
[2024-05-18 19:08:59] 2024-05-18 17:08:45,463 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-18 19:08:59] 2024-05-18 17:08:45,468 | WARNING  | process 1786749 is no longer using CPU - aborting
[2024-05-18 19:08:59] 2024-05-18 17:08:45,468 | INFO     | aborting job monitoring since job object (job id=6206320008) has expired
[2024-05-18 19:08:59] 2024-05-18 17:08:45,480 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | job 6206320008 has completed (purged errors)
[2024-05-18 19:08:59] 2024-05-18 17:08:45,482 | INFO     | overall cleanup function is called
[2024-05-18 19:08:59] 2024-05-18 17:08:46,487 | INFO     | --- collectZombieJob: --- 10, [1786749]
[2024-05-18 19:08:59] 2024-05-18 17:08:46,487 | INFO     | zombie collector waiting for pid 1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:46,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 19:08:59] 2024-05-18 17:08:47,493 | INFO     | collected zombie processes
[2024-05-18 19:08:59] 2024-05-18 17:08:47,493 | INFO     | will now attempt to kill all subprocesses of pid=1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:47,580 | INFO     | process IDs to be killed: [1786749] (in reverse order)
[2024-05-18 19:08:59] 2024-05-18 17:08:47,665 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 19:08:59] 2024-05-18 17:08:47,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 19:08:59] 2024-05-18 17:08:47,670 | INFO     | did not find any defunct processes belonging to 1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:47,673 | INFO     | did not find any defunct processes belonging to 1786749
[2024-05-18 19:08:59] 2024-05-18 17:08:47,673 | INFO     | ready for new job
[2024-05-18 19:08:59] 2024-05-18 17:08:47,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 19:08:59] 2024-05-18 17:08:47,675 | INFO     | *************************************
[2024-05-18 19:08:59] 2024-05-18 17:08:47,675 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 19:08:59] 2024-05-18 17:08:47,675 | INFO     | *************************************
[2024-05-18 19:08:59] 2024-05-18 17:08:47,675 | INFO     | 
[2024-05-18 19:08:59] 2024-05-18 17:08:47,676 | INFO     | architecture information:
[2024-05-18 19:08:59] 2024-05-18 17:08:47,677 | INFO     | executing command: cat /etc/os-release
[2024-05-18 19:08:59] 2024-05-18 17:08:47,687 | INFO     | cat /etc/os-release:
[2024-05-18 19:08:59] NAME="CentOS Linux"
[2024-05-18 19:08:59] VERSION="7 (Core)"
[2024-05-18 19:08:59] ID="centos"
[2024-05-18 19:08:59] ID_LIKE="rhel fedora"
[2024-05-18 19:08:59] VERSION_ID="7"
[2024-05-18 19:08:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 19:08:59] ANSI_COLOR="0;31"
[2024-05-18 19:08:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 19:08:59] HOME_URL="https://www.centos.org/"
[2024-05-18 19:08:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 19:08:59] 
[2024-05-18 19:08:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 19:08:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 19:08:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 19:08:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 19:08:59] 
[2024-05-18 19:08:59] 2024-05-18 17:08:47,687 | INFO     | *************************************
[2024-05-18 19:08:59] 2024-05-18 17:08:48,189 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-18 19:08:59] 2024-05-18 17:08:48,204 | INFO     | sufficient remaining disk space (1622085206016 B)
[2024-05-18 19:08:59] 2024-05-18 17:08:48,205 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 19:08:59] 2024-05-18 17:08:48,205 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 19:08:59] 2024-05-18 17:08:48,205 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 19:08:59] 2024-05-18 17:08:48,300 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 19:08:59] 2024-05-18 17:08:48,301 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 19:08:59] 2024-05-18 17:08:48,301 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 19:08:59] 2024-05-18 17:08:48,494 | INFO     | all payload control threads have been joined
[2024-05-18 19:08:59] 2024-05-18 17:08:48,550 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 19:08:59] 2024-05-18 17:08:48,836 | INFO     | all job control threads have been joined
[2024-05-18 19:08:59] 2024-05-18 17:08:48,946 | INFO     | all data control threads have been joined
[2024-05-18 19:08:59] 2024-05-18 17:08:48,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 19:08:59] 2024-05-18 17:08:48,975 | INFO     | aborting loop
[2024-05-18 19:08:59] 2024-05-18 17:08:49,210 | INFO     | [job] retrieve thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,325 | INFO     | [payload] validate_post thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,499 | INFO     | [payload] control thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,710 | INFO     | [job] validate thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,838 | INFO     | [job] control thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,890 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,951 | INFO     | [data] control thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:49,980 | INFO     | [job] job monitor thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,033 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,067 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,211 | INFO     | [data] copytool_out thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,334 | INFO     | [payload] failed_post thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 19:08:59] 2024-05-18 17:08:50,499 | INFO     | [data] copytool_in thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:50,674 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:51,473 | INFO     | [job] queue monitor thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:52,555 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 19:08:59] 2024-05-18 17:08:53,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47746932982848)>', '<ExcThread(monitor, started 47747102131968)>']
[2024-05-18 19:08:59] 2024-05-18 17:08:54,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 19:08:59] 2024-05-18 17:08:54,327 | INFO     | [monitor] control thread has ended
[2024-05-18 19:08:59] 2024-05-18 17:08:58,852 | INFO     | all workflow threads have been joined
[2024-05-18 19:08:59] 2024-05-18 17:08:58,852 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 19:08:59] 2024-05-18 17:08:58,852 | INFO     | traces error code: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:58,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 19:08:59] 2024-05-18 17:08:58,945 [wrapper] ==== pilot stdout END ====
[2024-05-18 19:08:59] 2024-05-18 17:08:58,947 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 19:08:59] 2024-05-18 17:08:58,949 [wrapper] pilotpid: 1779910
[2024-05-18 19:08:59] 2024-05-18 17:08:58,950 [wrapper] Pilot exit status: 0
[2024-05-18 19:08:59] 2024-05-18 17:08:58,957 [wrapper] pandaids: 6206320008
[2024-05-18 19:08:59] 2024-05-18 17:08:58,995 [wrapper] cleanup: SIGTERM to supervisor_pilot 2109933 1779911
[2024-05-18 19:08:59] 2024-05-18 17:08:58,997 [wrapper] Test setup, not cleaning
[2024-05-18 19:08:59] 2024-05-18 17:08:58,999 [wrapper] ==== wrapper stdout END ====
[2024-05-18 19:08:59] 2024-05-18 17:08:59,001 [wrapper] ==== wrapper stderr END ====
[2024-05-18 19:08:59] 2024-05-18 17:08:59,005 [wrapper] apfmon messages muted
[2024-05-18 19:08:59]  *** Error codes and diagnostics ***
[2024-05-18 19:08:59]     "exeErrorCode": 0,
[2024-05-18 19:08:59]     "exeErrorDiag": "",
[2024-05-18 19:08:59]     "pilotErrorCode": 0,
[2024-05-18 19:08:59]     "pilotErrorDiag": "",
[2024-05-18 19:08:59]  *** Listing of results directory ***
[2024-05-18 19:08:59] total 833460
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc    467845 May 15 00:56 pilot3.tar.gz
[2024-05-18 19:08:59] -rwx------ 1 boinc boinc     32251 May 15 01:19 runpilot2-wrapper.sh
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc      5633 May 15 01:19 queuedata.json
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc       100 May 18 15:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 19:08:59] -rwxr-xr-x 1 boinc boinc      7986 May 18 15:56 run_atlas
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc       105 May 18 15:56 job.xml
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc 599318654 May 18 16:01 EVNT.38776119._000123.pool.root.1
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc    480016 May 18 16:01 input.tar.gz
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc     17537 May 18 16:01 start_atlas.sh
[2024-05-18 19:08:59] drwxrwx--x 2 boinc boinc      4096 May 18 16:01 shared
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc         0 May 18 16:01 boinc_lockfile
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc      2633 May 18 16:01 pandaJob.out
[2024-05-18 19:08:59] -rw------- 1 boinc boinc       424 May 18 16:01 setup.sh.local
[2024-05-18 19:08:59] -rw------- 1 boinc boinc   1019434 May 18 16:01 agis_schedconf.cvmfs.json
[2024-05-18 19:08:59] -rw------- 1 boinc boinc   1324701 May 18 16:01 cric_ddmendpoints.json
[2024-05-18 19:08:59] drwx------ 4 boinc boinc      4096 May 18 16:01 pilot3
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc      6464 May 18 16:57 init_data.xml
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc       531 May 18 19:08 boinc_task_state.xml
[2024-05-18 19:08:59] -rw------- 1 boinc boinc 247539871 May 18 19:08 HITS.38776125._010835.pool.root.1
[2024-05-18 19:08:59] -rw------- 1 boinc boinc      1061 May 18 19:08 memory_monitor_summary.json
[2024-05-18 19:08:59] -rw------- 1 boinc boinc         0 May 18 19:08 agis_ddmendpoints.agis.ALL.json
[2024-05-18 19:08:59] -rw------- 1 boinc boinc    309907 May 18 19:08 log.38776125._010835.job.log.tgz.1
[2024-05-18 19:08:59] -rw------- 1 boinc boinc      7764 May 18 19:08 heartbeat.json
[2024-05-18 19:08:59] -rw------- 1 boinc boinc        95 May 18 19:08 pilot_heartbeat.json
[2024-05-18 19:08:59] -rw------- 1 boinc boinc      4222 May 18 19:08 pilotlog.txt
[2024-05-18 19:08:59] -rw------- 1 boinc boinc   1224267 May 18 19:08 log.38776125._010835.job.log.1
[2024-05-18 19:08:59] -rw------- 1 boinc boinc       357 May 18 19:08 output.list
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc       620 May 18 19:08 runtime_log
[2024-05-18 19:08:59] -rw------- 1 boinc boinc   1556480 May 18 19:08 result.tar.gz
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc     11410 May 18 19:08 runtime_log.err
[2024-05-18 19:08:59] -rw------- 1 boinc boinc       659 May 18 19:08 3UhKDmFcGR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmMqIKDmOMSFKo.diag
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc      8192 May 18 19:08 boinc_mmap_file
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc        28 May 18 19:08 wrapper_checkpoint.txt
[2024-05-18 19:08:59] -rw-r--r-- 1 boinc boinc     21418 May 18 19:08 stderr.txt
[2024-05-18 19:08:59] HITS file was successfully produced:
[2024-05-18 19:08:59] -rw------- 1 boinc boinc 247539871 May 18 19:08 shared/HITS.pool.root.1
[2024-05-18 19:08:59]  *** Contents of shared directory: ***
[2024-05-18 19:08:59] total 829036
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc 599318654 May 18 16:01 ATLAS.root_0
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc    480016 May 18 16:01 input.tar.gz
[2024-05-18 19:08:59] -rw-r--r-- 2 boinc boinc     17537 May 18 16:01 start_atlas.sh
[2024-05-18 19:08:59] -rw------- 1 boinc boinc 247539871 May 18 19:08 HITS.pool.root.1
[2024-05-18 19:08:59] -rw------- 1 boinc boinc   1556480 May 18 19:08 result.tar.gz
19:09:01 (1775384): run_atlas exited; CPU time 41857.402617
19:09:01 (1775384): called boinc_finish(0)

</stderr_txt>
]]>

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