Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:14 (392214): wrapper (7.7.26015): starting
09:18:14 (392214): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 09:18:14] Arguments: --nthreads 4
[2024-05-17 09:18:14] Threads: 4
[2024-05-17 09:18:14] Checking for CVMFS
[2024-05-17 09:18:14] No cvmfs_config command found, will try listing directly
[2024-05-17 09:18:14] CVMFS is ok
[2024-05-17 09:18:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:18:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:18:14] Further information can be found at the LHC@home message board.
[2024-05-17 09:18:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:18:14] Checking for apptainer binary...
[2024-05-17 09:18:14] which: no apptainer in ((null))
[2024-05-17 09:18:14] apptainer is not installed, using version from CVMFS
[2024-05-17 09:18:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:18:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-17 09:18:15] apptainer works
[2024-05-17 09:18:15] Set ATHENA_PROC_NUMBER=4
[2024-05-17 09:18:15] Set ATHENA_CORE_NUMBER=4
[2024-05-17 09:18:15] Starting ATLAS job with PandaID=6206288314
[2024-05-17 09:18:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:40:37]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:40:37] 2024-05-17 15:40:19,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 17:40:37] 2024-05-17 15:40:19,588 | INFO     | fitting pss+swap vs Time
[2024-05-17 17:40:37] 2024-05-17 15:40:19,589 | INFO     | model: linear, x: [1715930330.0, 1715930391.0, 1715930452.0, 1715930513.0, 1715930574.0, 1715930635.0, 1715930696.0, 1715930757.0, 1715930818.0, 1715930879.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,590 | INFO     | sum of square deviations: 37381566007.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,596 | INFO     | sum of deviations: 264408358249.99997
[2024-05-17 17:40:37] 2024-05-17 15:40:19,596 | INFO     | mean x: 1715945366.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,596 | INFO     | mean y: 2323852.2793522268
[2024-05-17 17:40:37] 2024-05-17 15:40:19,596 | INFO     | -- intersect: -12134949827.264462
[2024-05-17 17:40:37] 2024-05-17 15:40:19,596 | INFO     | intersect: -12134949827.264462
[2024-05-17 17:40:37] 2024-05-17 15:40:19,597 | INFO     | chi2: 4.714509628469862
[2024-05-17 17:40:37] 2024-05-17 15:40:19,598 | INFO     | model: linear, x: [1715930330.0, 1715930391.0, 1715930452.0, 1715930513.0, 1715930574.0, 1715930635.0, 1715930696.0, 1715930757.0, 1715930818.0, 1715930879.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,598 | INFO     | sum of square deviations: 36257944940.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,604 | INFO     | sum of deviations: 292490524552.0002
[2024-05-17 17:40:37] 2024-05-17 15:40:19,604 | INFO     | mean x: 1715945214.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,604 | INFO     | mean y: 2327627.9018404908
[2024-05-17 17:40:37] 2024-05-17 15:40:19,604 | INFO     | -- intersect: -13840092745.781761
[2024-05-17 17:40:37] 2024-05-17 15:40:19,605 | INFO     | intersect: -13840092745.781761
[2024-05-17 17:40:37] 2024-05-17 15:40:19,605 | INFO     | chi2: 3.90600767704695
[2024-05-17 17:40:37] 2024-05-17 15:40:19,605 | INFO     | current chi2=3.90600767704695 (change=17.149226857880432 %)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,606 | INFO     | right removable region: 488
[2024-05-17 17:40:37] 2024-05-17 15:40:19,606 | INFO     | model: linear, x: [1715930635.0, 1715930696.0, 1715930757.0, 1715930818.0, 1715930879.0, 1715930940.0, 1715931001.0, 1715931062.0, 1715931123.0, 1715931184.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,607 | INFO     | sum of square deviations: 36257944940.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,613 | INFO     | sum of deviations: 150729636588.99997
[2024-05-17 17:40:37] 2024-05-17 15:40:19,613 | INFO     | mean x: 1715945519.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,613 | INFO     | mean y: 2339262.875255624
[2024-05-17 17:40:37] 2024-05-17 15:40:19,614 | INFO     | -- intersect: -7131099902.344927
[2024-05-17 17:40:37] 2024-05-17 15:40:19,614 | INFO     | intersect: -7131099902.344927
[2024-05-17 17:40:37] 2024-05-17 15:40:19,614 | INFO     | chi2: 2.4141547976078863
[2024-05-17 17:40:37] 2024-05-17 15:40:19,614 | INFO     | current chi2=2.4141547976078863 (change=48.79308798036281 %)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,615 | INFO     | model: linear, x: [1715930940.0, 1715931001.0, 1715931062.0, 1715931123.0, 1715931184.0, 1715931245.0, 1715931306.0, 1715931367.0, 1715931428.0, 1715931489.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,615 | INFO     | sum of square deviations: 35157068485.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,621 | INFO     | sum of deviations: 54185716351.99999
[2024-05-17 17:40:37] 2024-05-17 15:40:19,621 | INFO     | mean x: 1715945671.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,621 | INFO     | mean y: 2352638.256198347
[2024-05-17 17:40:37] 2024-05-17 15:40:19,621 | INFO     | -- intersect: -2642342993.036598
[2024-05-17 17:40:37] 2024-05-17 15:40:19,621 | INFO     | intersect: -2642342993.036598
[2024-05-17 17:40:37] 2024-05-17 15:40:19,622 | INFO     | chi2: 0.9037424607255814
[2024-05-17 17:40:37] 2024-05-17 15:40:19,622 | INFO     | current chi2=0.9037424607255814 (change=62.564850372433746 %)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,623 | INFO     | model: linear, x: [1715931245.0, 1715931306.0, 1715931367.0, 1715931428.0, 1715931489.0, 1715931550.0, 1715931611.0, 1715931672.0, 1715931733.0, 1715931794.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,623 | INFO     | sum of square deviations: 34078704080.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,629 | INFO     | sum of deviations: 34070936767.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,629 | INFO     | mean x: 1715945824.0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,629 | INFO     | mean y: 2355478.052192067
[2024-05-17 17:40:37] 2024-05-17 15:40:19,629 | INFO     | -- intersect: -1713199242.8038986
[2024-05-17 17:40:37] 2024-05-17 15:40:19,629 | INFO     | intersect: -1713199242.8038986
[2024-05-17 17:40:37] 2024-05-17 15:40:19,630 | INFO     | chi2: 0.8341105512355046
[2024-05-17 17:40:37] 2024-05-17 15:40:19,630 | INFO     | current chi2=0.8341105512355046 (change=7.704839875972179 %)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,630 | INFO     | left removable region: 30
[2024-05-17 17:40:37] 2024-05-17 15:40:19,631 | INFO     | model: linear, x: [1715932160.0, 1715932221.0, 1715932282.0, 1715932343.0, 1715932404.0, 1715932465.0, 1715932526.0, 1715932587.0, 1715932648.0, 1715932709.0, 1715
[2024-05-17 17:40:37] 2024-05-17 15:40:19,631 | INFO     | sum of square deviations: 29790156694.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,637 | INFO     | sum of deviations: 51385020820.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,637 | INFO     | mean x: 1715946098.5
[2024-05-17 17:40:37] 2024-05-17 15:40:19,637 | INFO     | mean y: 2361433.81441048
[2024-05-17 17:40:37] 2024-05-17 15:40:19,637 | INFO     | -- intersect: -2957472812.8633633
[2024-05-17 17:40:37] 2024-05-17 15:40:19,637 | INFO     | intersect: -2957472812.8633633
[2024-05-17 17:40:37] 2024-05-17 15:40:19,638 | INFO     | chi2: 0.0027804419557221636
[2024-05-17 17:40:37] 2024-05-17 15:40:19,638 | INFO     | -- intersect: -2957472812.8633633
[2024-05-17 17:40:37] 2024-05-17 15:40:19,638 | INFO     | current memory leak: 1.72 B/s (using 458 data points, chi2=0.00)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | ..............................
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . Timing measurements:
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . get job = 0 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . initial setup = 1 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . payload setup = 5 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . stage-in = 0 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . payload execution = 30083 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . stage-out = 0 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | . log creation = 0 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,639 | INFO     | ..............................
[2024-05-17 17:40:37] 2024-05-17 15:40:19,744 | INFO     | 
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | job summary report
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | --------------------------------------------------
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | PanDA job id: 6206288314
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | task id: 38921007
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | errors: (none)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | pilot state: finished 
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | transexitcode: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,745 | INFO     | exeerrorcode: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | exeerrordiag: 
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | exitcode: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | exitmsg: OK
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | cpuconsumptiontime: 117647 s
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | nevents: 400
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | neventsw: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | pid: 404798
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | pgrp: 404798
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | corecount: 4
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | event service: False
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | sizes: {0: 2392025, 1: 2392224, 5: 2392430, 11: 2392486, 30092: 2430308, 30094: 2439476, 30099: 2439590}
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | --------------------------------------------------
[2024-05-17 17:40:37] 2024-05-17 15:40:19,746 | INFO     | 
[2024-05-17 17:40:37] 2024-05-17 15:40:19,747 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/1
[2024-05-17 17:40:37] 2024-05-17 15:40:19,776 | WARNING  | process 404798 is no longer using CPU - aborting
[2024-05-17 17:40:37] 2024-05-17 15:40:19,777 | INFO     | aborting job monitoring since job object (job id=6206288314) has expired
[2024-05-17 17:40:37] 2024-05-17 15:40:19,800 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,800 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | job 6206288314 has completed (purged errors)
[2024-05-17 17:40:37] 2024-05-17 15:40:19,802 | INFO     | overall cleanup function is called
[2024-05-17 17:40:37] 2024-05-17 15:40:20,810 | INFO     | --- collectZombieJob: --- 10, [404798]
[2024-05-17 17:40:37] 2024-05-17 15:40:20,811 | INFO     | zombie collector waiting for pid 404798
[2024-05-17 17:40:37] 2024-05-17 15:40:20,811 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:40:37] 2024-05-17 15:40:21,814 | INFO     | collected zombie processes
[2024-05-17 17:40:37] 2024-05-17 15:40:21,814 | INFO     | will now attempt to kill all subprocesses of pid=404798
[2024-05-17 17:40:37] 2024-05-17 15:40:22,020 | INFO     | process IDs to be killed: [404798] (in reverse order)
[2024-05-17 17:40:37] 2024-05-17 15:40:22,180 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:40:37] 2024-05-17 15:40:22,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:40:37] 2024-05-17 15:40:22,194 | INFO     | did not find any defunct processes belonging to 404798
[2024-05-17 17:40:37] 2024-05-17 15:40:22,204 | INFO     | did not find any defunct processes belonging to 404798
[2024-05-17 17:40:37] 2024-05-17 15:40:22,204 | INFO     | ready for new job
[2024-05-17 17:40:37] 2024-05-17 15:40:22,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:40:37] 2024-05-17 15:40:22,207 | INFO     | *************************************
[2024-05-17 17:40:37] 2024-05-17 15:40:22,207 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:40:37] 2024-05-17 15:40:22,208 | INFO     | *************************************
[2024-05-17 17:40:37] 2024-05-17 15:40:22,208 | INFO     | 
[2024-05-17 17:40:37] 2024-05-17 15:40:22,212 | INFO     | architecture information:
[2024-05-17 17:40:37] 2024-05-17 15:40:22,212 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:40:37] 2024-05-17 15:40:22,235 | INFO     | cat /etc/os-release:
[2024-05-17 17:40:37] NAME="CentOS Linux"
[2024-05-17 17:40:37] VERSION="7 (Core)"
[2024-05-17 17:40:37] ID="centos"
[2024-05-17 17:40:37] ID_LIKE="rhel fedora"
[2024-05-17 17:40:37] VERSION_ID="7"
[2024-05-17 17:40:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:40:37] ANSI_COLOR="0;31"
[2024-05-17 17:40:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:40:37] HOME_URL="https://www.centos.org/"
[2024-05-17 17:40:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:40:37] 
[2024-05-17 17:40:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:40:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:40:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:40:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:40:37] 
[2024-05-17 17:40:37] 2024-05-17 15:40:22,235 | INFO     | *************************************
[2024-05-17 17:40:37] 2024-05-17 15:40:22,738 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/1
[2024-05-17 17:40:37] 2024-05-17 15:40:22,756 | INFO     | sufficient remaining disk space (2983131611136 B)
[2024-05-17 17:40:37] 2024-05-17 15:40:22,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:40:37] 2024-05-17 15:40:22,757 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:40:37] 2024-05-17 15:40:23,216 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:40:37] 2024-05-17 15:40:23,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:40:37] 2024-05-17 15:40:23,286 | INFO     | aborting loop
[2024-05-17 17:40:37] 2024-05-17 15:40:23,537 | INFO     | all data control threads have been joined
[2024-05-17 17:40:37] 2024-05-17 15:40:23,541 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:40:37] 2024-05-17 15:40:23,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:40:37] 2024-05-17 15:40:23,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:40:37] 2024-05-17 15:40:23,577 | INFO     | all payload control threads have been joined
[2024-05-17 17:40:37] 2024-05-17 15:40:23,762 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:23,882 | INFO     | all job control threads have been joined
[2024-05-17 17:40:37] 2024-05-17 15:40:23,888 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:23,928 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,291 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,296 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,434 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,542 | INFO     | [data] control thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,582 | INFO     | [payload] control thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,600 | INFO     | [job] validate thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,650 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,658 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,752 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:24,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:40:37] 2024-05-17 15:40:24,887 | INFO     | [job] control thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:25,221 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:25,760 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:25,782 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:40:37] 2024-05-17 15:40:29,788 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:40:37] 2024-05-17 15:40:31,688 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47787228017728)>', '<ExcThread(monitor, started 47787399268096)>']
[2024-05-17 17:40:37] 2024-05-17 15:40:32,579 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:40:37] 2024-05-17 15:40:32,579 | INFO     | [monitor] control thread has ended
[2024-05-17 17:40:37] 2024-05-17 15:40:36,713 | INFO     | all workflow threads have been joined
[2024-05-17 17:40:37] 2024-05-17 15:40:36,713 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:40:37] 2024-05-17 15:40:36,713 | INFO     | traces error code: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:36,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:40:37] 2024-05-17 15:40:36,803 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:40:37] 2024-05-17 15:40:36,806 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:40:37] 2024-05-17 15:40:36,807 [wrapper] pilotpid: 396857
[2024-05-17 17:40:37] 2024-05-17 15:40:36,809 [wrapper] Pilot exit status: 0
[2024-05-17 17:40:37] 2024-05-17 15:40:36,818 [wrapper] pandaids: 6206288314
[2024-05-17 17:40:37] 2024-05-17 15:40:36,905 [wrapper] cleanup: SIGTERM to supervisor_pilot 2820014 396858
[2024-05-17 17:40:37] 2024-05-17 15:40:36,909 [wrapper] Test setup, not cleaning
[2024-05-17 17:40:37] 2024-05-17 15:40:36,911 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:40:37] 2024-05-17 15:40:36,913 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:40:37] 2024-05-17 15:40:36,921 [wrapper] apfmon messages muted
[2024-05-17 17:40:37]  *** Error codes and diagnostics ***
[2024-05-17 17:40:37]     "exeErrorCode": 0,
[2024-05-17 17:40:37]     "exeErrorDiag": "",
[2024-05-17 17:40:37]     "pilotErrorCode": 0,
[2024-05-17 17:40:37]     "pilotErrorDiag": "",
[2024-05-17 17:40:37]  *** Listing of results directory ***
[2024-05-17 17:40:37] total 926472
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc    467845 May 15 00:26 pilot3.tar.gz
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc      5633 May 15 00:35 queuedata.json
[2024-05-17 17:40:37] -rwx------ 1 boinc boinc     32251 May 15 00:36 runpilot2-wrapper.sh
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc       100 May 17 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:40:37] -rwxr-xr-x 1 boinc boinc      7986 May 17 09:18 run_atlas
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc       105 May 17 09:18 job.xml
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc      6646 May 17 09:18 init_data.xml
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc 582901282 May 17 09:18 EVNT.38776201._000015.pool.root.1
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc     17537 May 17 09:18 start_atlas.sh
[2024-05-17 17:40:37] drwxrwx--x 2 boinc boinc      4096 May 17 09:18 shared
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc    479996 May 17 09:18 input.tar.gz
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc         0 May 17 09:18 boinc_lockfile
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc      2626 May 17 09:18 pandaJob.out
[2024-05-17 17:40:37] -rw------- 1 boinc boinc       424 May 17 09:18 setup.sh.local
[2024-05-17 17:40:37] -rw------- 1 boinc boinc   1019364 May 17 09:18 agis_schedconf.cvmfs.json
[2024-05-17 17:40:37] -rw------- 1 boinc boinc   1324701 May 17 09:18 cric_ddmendpoints.json
[2024-05-17 17:40:37] drwx------ 4 boinc boinc      4096 May 17 09:18 pilot3
[2024-05-17 17:40:37] -rw------- 1 boinc boinc 353975137 May 17 17:39 HITS.38921007._000367.pool.root.1
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc       532 May 17 17:39 boinc_task_state.xml
[2024-05-17 17:40:37] -rw------- 1 boinc boinc        95 May 17 17:39 pilot_heartbeat.json
[2024-05-17 17:40:37] -rw------- 1 boinc boinc      1048 May 17 17:40 memory_monitor_summary.json
[2024-05-17 17:40:37] -rw------- 1 boinc boinc         0 May 17 17:40 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:40:37] -rw------- 1 boinc boinc    535789 May 17 17:40 log.38921007._000367.job.log.tgz.1
[2024-05-17 17:40:37] -rw------- 1 boinc boinc      7727 May 17 17:40 heartbeat.json
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc      8192 May 17 17:40 boinc_mmap_file
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc        29 May 17 17:40 wrapper_checkpoint.txt
[2024-05-17 17:40:37] -rw------- 1 boinc boinc      4223 May 17 17:40 pilotlog.txt
[2024-05-17 17:40:37] -rw------- 1 boinc boinc   3613424 May 17 17:40 log.38921007._000367.job.log.1
[2024-05-17 17:40:37] -rw------- 1 boinc boinc       357 May 17 17:40 output.list
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc       620 May 17 17:40 runtime_log
[2024-05-17 17:40:37] -rw------- 1 boinc boinc   4167680 May 17 17:40 result.tar.gz
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc     11429 May 17 17:40 runtime_log.err
[2024-05-17 17:40:37] -rw------- 1 boinc boinc       661 May 17 17:40 AicLDmnvFR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmbPNKDmylbTam.diag
[2024-05-17 17:40:37] -rw-r--r-- 1 boinc boinc     21328 May 17 17:40 stderr.txt
[2024-05-17 17:40:37] HITS file was successfully produced:
[2024-05-17 17:40:37] -rw------- 1 boinc boinc 353975137 May 17 17:39 shared/HITS.pool.root.1
[2024-05-17 17:40:37]  *** Contents of shared directory: ***
[2024-05-17 17:40:37] total 919492
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc 582901282 May 17 09:18 ATLAS.root_0
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc     17537 May 17 09:18 start_atlas.sh
[2024-05-17 17:40:37] -rw-r--r-- 2 boinc boinc    479996 May 17 09:18 input.tar.gz
[2024-05-17 17:40:37] -rw------- 1 boinc boinc 353975137 May 17 17:39 HITS.pool.root.1
[2024-05-17 17:40:37] -rw------- 1 boinc boinc   4167680 May 17 17:40 result.tar.gz
17:40:38 (392214): run_atlas exited; CPU time 116980.804285
17:40:38 (392214): called boinc_finish(0)

</stderr_txt>
]]>

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