Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:00:43 (48231): wrapper (7.7.26015): starting
14:00:43 (48231): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 14:00:43] Arguments: --nthreads 4
[2024-05-16 14:00:43] Threads: 4
[2024-05-16 14:00:43] Checking for CVMFS
[2024-05-16 14:00:43] No cvmfs_config command found, will try listing directly
[2024-05-16 14:00:43] CVMFS is ok
[2024-05-16 14:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 14:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 14:00:43] Further information can be found at the LHC@home message board.
[2024-05-16 14:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 14:00:43] Checking for apptainer binary...
[2024-05-16 14:00:43] which: no apptainer in ((null))
[2024-05-16 14:00:43] apptainer is not installed, using version from CVMFS
[2024-05-16 14:00:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 14:00:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-16 14:00:44] apptainer works
[2024-05-16 14:00:44] Set ATHENA_PROC_NUMBER=4
[2024-05-16 14:00:44] Set ATHENA_CORE_NUMBER=4
[2024-05-16 14:00:44] Starting ATLAS job with PandaID=6206287947
[2024-05-16 14:00:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 22:30:16]  *** The last 200 lines of the pilot log: ***
[2024-05-16 22:30:16] 2024-05-16 20:30:01,066 | INFO     | current chi2=0.01685819028400855 (change=86.85915794694222 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,066 | INFO     | model: linear, x: [1715862119.0, 1715862180.0, 1715862241.0, 1715862302.0, 1715862363.0, 1715862424.0, 1715862485.0, 1715862546.0, 1715862607.0, 1715862668.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,066 | INFO     | sum of square deviations: 34292611011.9981
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | sum of deviations: 55378445664.25415
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | mean x: 1715876728.5020833
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | mean y: 2368662.745833333
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | -- intersect: -2768566048.0192595
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | intersect: -2768566048.0192595
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | chi2: 0.008000293389405761
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | current chi2=0.008000293389405761 (change=52.54358116366304 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,070 | INFO     | model: linear, x: [1715862424.0, 1715862485.0, 1715862546.0, 1715862607.0, 1715862668.0, 1715862729.0, 1715862790.0, 1715862851.0, 1715862912.0, 1715862973.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,071 | INFO     | sum of square deviations: 33232088496.997845
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | sum of deviations: 50007680615.96846
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | mean x: 1715876881.0021052
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | mean y: 2369435.0315789473
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | -- intersect: -2579683843.0592375
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | intersect: -2579683843.0592375
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | chi2: 0.005633809100698404
[2024-05-16 22:30:16] 2024-05-16 20:30:01,074 | INFO     | current chi2=0.005633809100698404 (change=29.57996880265829 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,075 | INFO     | model: linear, x: [1715862729.0, 1715862790.0, 1715862851.0, 1715862912.0, 1715862973.0, 1715863034.0, 1715863095.0, 1715863156.0, 1715863217.0, 1715863278.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,075 | INFO     | sum of square deviations: 32193659419.49785
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | sum of deviations: 45337012227.23403
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | mean x: 1715877033.5021276
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | mean y: 2370120.765957447
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | -- intersect: -2414029240.196451
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | intersect: -2414029240.196451
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | chi2: 0.003885022425605411
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | current chi2=0.003885022425605411 (change=31.04092886065667 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,078 | INFO     | model: linear, x: [1715863034.0, 1715863095.0, 1715863156.0, 1715863217.0, 1715863278.0, 1715863339.0, 1715863400.0, 1715863461.0, 1715863522.0, 1715863583.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,079 | INFO     | sum of square deviations: 31177091216.997643
[2024-05-16 22:30:16] 2024-05-16 20:30:01,081 | INFO     | sum of deviations: 41379338831.748405
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | mean x: 1715877186.0021505
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | mean y: 2370714.251612903
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | -- intersect: -2275002212.525469
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | intersect: -2275002212.525469
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | chi2: 0.0026928394875173037
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | current chi2=0.0026928394875173037 (change=30.686642378964567 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,082 | INFO     | model: linear, x: [1715863339.0, 1715863400.0, 1715863461.0, 1715863522.0, 1715863583.0, 1715863644.0, 1715863705.0, 1715863766.0, 1715863827.0, 1715863888.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,083 | INFO     | sum of square deviations: 30182151326.99783
[2024-05-16 22:30:16] 2024-05-16 20:30:01,085 | INFO     | sum of deviations: 38201156574.15001
[2024-05-16 22:30:16] 2024-05-16 20:30:01,085 | INFO     | mean x: 1715877338.502174
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | mean y: 2371201.35
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | -- intersect: -2169392440.0152345
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | intersect: -2169392440.0152345
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | chi2: 0.00204555687429984
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | current chi2=0.00204555687429984 (change=24.03717771586281 %)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | left removable region: 80
[2024-05-16 22:30:16] 2024-05-16 20:30:01,086 | INFO     | model: linear, x: [1715865779.0, 1715865840.0, 1715865901.0, 1715865962.0, 1715866023.0, 1715866084.0, 1715866145.0, 1715866206.0, 1715866267.0, 1715866328.0, 1715
[2024-05-16 22:30:16] 2024-05-16 20:30:01,087 | INFO     | sum of square deviations: 22002767985.497543
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | sum of deviations: 23686606974.927555
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | mean x: 1715878375.5024154
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | mean y: 2373278.572463768
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | -- intersect: -1844818707.6399846
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | intersect: -1844818707.6399846
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | chi2: 0.0005986899030127694
[2024-05-16 22:30:16] 2024-05-16 20:30:01,089 | INFO     | -- intersect: -1844818707.6399846
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | current memory leak: 1.08 B/s (using 414 data points, chi2=0.00)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | ..............................
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . Timing measurements:
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . get job = 0 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . initial setup = 1 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . payload setup = 9 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . stage-in = 0 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . payload execution = 30495 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . stage-out = 1 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | . log creation = 0 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,090 | INFO     | ..............................
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | 
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | job summary report
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | --------------------------------------------------
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | PanDA job id: 6206287947
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | task id: 38920995
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | errors: (none)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | pilot state: finished 
[2024-05-16 22:30:16] 2024-05-16 20:30:01,282 | INFO     | transexitcode: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | exeerrorcode: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | exeerrordiag: 
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | exitcode: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | exitmsg: OK
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | cpuconsumptiontime: 113908 s
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | nevents: 400
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | neventsw: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | pid: 64324
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | pgrp: 64324
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | corecount: 4
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | event service: False
[2024-05-16 22:30:16] 2024-05-16 20:30:01,283 | INFO     | sizes: {0: 2392183, 10: 2392389, 11: 2392417, 30509: 2430039, 30510: 2439077, 30517: 2439191}
[2024-05-16 22:30:16] 2024-05-16 20:30:01,284 | INFO     | --------------------------------------------------
[2024-05-16 22:30:16] 2024-05-16 20:30:01,284 | INFO     | 
[2024-05-16 22:30:16] 2024-05-16 20:30:01,284 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/3
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,310 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 22:30:16] 2024-05-16 20:30:01,311 | INFO     | job 6206287947 has completed (purged errors)
[2024-05-16 22:30:16] 2024-05-16 20:30:01,311 | INFO     | overall cleanup function is called
[2024-05-16 22:30:16] 2024-05-16 20:30:02,318 | INFO     | --- collectZombieJob: --- 10, [64324]
[2024-05-16 22:30:16] 2024-05-16 20:30:02,319 | INFO     | zombie collector waiting for pid 64324
[2024-05-16 22:30:16] 2024-05-16 20:30:02,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 22:30:16] 2024-05-16 20:30:03,323 | INFO     | collected zombie processes
[2024-05-16 22:30:16] 2024-05-16 20:30:03,324 | INFO     | will now attempt to kill all subprocesses of pid=64324
[2024-05-16 22:30:16] 2024-05-16 20:30:03,687 | INFO     | process IDs to be killed: [64324] (in reverse order)
[2024-05-16 22:30:16] 2024-05-16 20:30:04,049 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 22:30:16] 2024-05-16 20:30:04,049 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 22:30:16] 2024-05-16 20:30:04,068 | INFO     | did not find any defunct processes belonging to 64324
[2024-05-16 22:30:16] 2024-05-16 20:30:04,088 | INFO     | did not find any defunct processes belonging to 64324
[2024-05-16 22:30:16] 2024-05-16 20:30:04,089 | INFO     | ready for new job
[2024-05-16 22:30:16] 2024-05-16 20:30:04,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 22:30:16] 2024-05-16 20:30:04,092 | INFO     | *************************************
[2024-05-16 22:30:16] 2024-05-16 20:30:04,092 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 22:30:16] 2024-05-16 20:30:04,092 | INFO     | *************************************
[2024-05-16 22:30:16] 2024-05-16 20:30:04,092 | INFO     | 
[2024-05-16 22:30:16] 2024-05-16 20:30:04,099 | INFO     | architecture information:
[2024-05-16 22:30:16] 2024-05-16 20:30:04,099 | INFO     | executing command: cat /etc/os-release
[2024-05-16 22:30:16] 2024-05-16 20:30:04,209 | INFO     | cat /etc/os-release:
[2024-05-16 22:30:16] NAME="CentOS Linux"
[2024-05-16 22:30:16] VERSION="7 (Core)"
[2024-05-16 22:30:16] ID="centos"
[2024-05-16 22:30:16] ID_LIKE="rhel fedora"
[2024-05-16 22:30:16] VERSION_ID="7"
[2024-05-16 22:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 22:30:16] ANSI_COLOR="0;31"
[2024-05-16 22:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 22:30:16] HOME_URL="https://www.centos.org/"
[2024-05-16 22:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 22:30:16] 
[2024-05-16 22:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 22:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 22:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 22:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 22:30:16] 
[2024-05-16 22:30:16] 2024-05-16 20:30:04,209 | INFO     | *************************************
[2024-05-16 22:30:16] 2024-05-16 20:30:04,729 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/3
[2024-05-16 22:30:16] 2024-05-16 20:30:04,804 | INFO     | sufficient remaining disk space (3115929567232 B)
[2024-05-16 22:30:16] 2024-05-16 20:30:04,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 22:30:16] 2024-05-16 20:30:04,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 22:30:16] 2024-05-16 20:30:04,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 22:30:16] 2024-05-16 20:30:04,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 22:30:16] 2024-05-16 20:30:04,805 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 22:30:16] 2024-05-16 20:30:04,806 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 22:30:16] 2024-05-16 20:30:04,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 22:30:16] 2024-05-16 20:30:04,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 22:30:16] 2024-05-16 20:30:04,860 | INFO     | all payload control threads have been joined
[2024-05-16 22:30:16] 2024-05-16 20:30:05,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 22:30:16] 2024-05-16 20:30:05,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 22:30:16] 2024-05-16 20:30:05,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 22:30:16] 2024-05-16 20:30:05,024 | INFO     | will abort loop
[2024-05-16 22:30:16] 2024-05-16 20:30:05,193 | INFO     | all data control threads have been joined
[2024-05-16 22:30:16] 2024-05-16 20:30:05,813 | INFO     | [job] retrieve thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:05,866 | INFO     | [payload] control thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:05,999 | INFO     | all job control threads have been joined
[2024-05-16 22:30:16] 2024-05-16 20:30:06,029 | INFO     | [job] job monitor thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 22:30:16] 2024-05-16 20:30:06,199 | INFO     | [data] control thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,294 | INFO     | [job] validate thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,299 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,310 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,527 | INFO     | [payload] validate_post thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,810 | INFO     | [data] copytool_out thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,905 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:06,933 | INFO     | [data] copytool_in thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:07,005 | INFO     | [job] control thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:07,129 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:07,184 | INFO     | [job] queue monitor thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:07,229 | INFO     | [payload] failed_post thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:08,812 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 22:30:16] 2024-05-16 20:30:09,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47871603364928)>', '<ExcThread(monitor, started 47872112334592)>']
[2024-05-16 22:30:16] 2024-05-16 20:30:09,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 22:30:16] 2024-05-16 20:30:09,835 | INFO     | [monitor] control thread has ended
[2024-05-16 22:30:16] 2024-05-16 20:30:14,449 | INFO     | all workflow threads have been joined
[2024-05-16 22:30:16] 2024-05-16 20:30:14,449 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 22:30:16] 2024-05-16 20:30:14,449 | INFO     | traces error code: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:14,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 22:30:16] 2024-05-16 20:30:14,693 [wrapper] ==== pilot stdout END ====
[2024-05-16 22:30:16] 2024-05-16 20:30:14,709 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 22:30:16] 2024-05-16 20:30:14,731 [wrapper] pilotpid: 52957
[2024-05-16 22:30:16] 2024-05-16 20:30:14,748 [wrapper] Pilot exit status: 0
[2024-05-16 22:30:16] 2024-05-16 20:30:14,859 [wrapper] pandaids: 6206287947
[2024-05-16 22:30:16] 2024-05-16 20:30:15,167 [wrapper] cleanup: SIGTERM to supervisor_pilot 2315884 52958
[2024-05-16 22:30:16] 2024-05-16 20:30:15,189 [wrapper] Test setup, not cleaning
[2024-05-16 22:30:16] 2024-05-16 20:30:15,204 [wrapper] ==== wrapper stdout END ====
[2024-05-16 22:30:16] 2024-05-16 20:30:15,229 [wrapper] ==== wrapper stderr END ====
[2024-05-16 22:30:16] 2024-05-16 20:30:15,281 [wrapper] apfmon messages muted
[2024-05-16 22:30:16]  *** Error codes and diagnostics ***
[2024-05-16 22:30:16]     "exeErrorCode": 0,
[2024-05-16 22:30:16]     "exeErrorDiag": "",
[2024-05-16 22:30:16]     "pilotErrorCode": 0,
[2024-05-16 22:30:16]     "pilotErrorDiag": "",
[2024-05-16 22:30:16]  *** Listing of results directory ***
[2024-05-16 22:30:16] total 968936
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc    467845 May 15 00:26 pilot3.tar.gz
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc      5633 May 15 00:29 queuedata.json
[2024-05-16 22:30:16] -rwx------ 1 boinc boinc     32251 May 15 00:30 runpilot2-wrapper.sh
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc       100 May 16 14:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 22:30:16] -rwxr-xr-x 1 boinc boinc      7986 May 16 14:00 run_atlas
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc       105 May 16 14:00 job.xml
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc 630481217 May 16 14:00 EVNT.38776180._000081.pool.root.1
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc     17537 May 16 14:00 start_atlas.sh
[2024-05-16 22:30:16] drwxrwx--x 2 boinc boinc      4096 May 16 14:00 shared
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc    479991 May 16 14:00 input.tar.gz
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc      6644 May 16 14:00 init_data.xml
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc         0 May 16 14:00 boinc_lockfile
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc      2612 May 16 14:00 pandaJob.out
[2024-05-16 22:30:16] -rw------- 1 boinc boinc       424 May 16 14:00 setup.sh.local
[2024-05-16 22:30:16] -rw------- 1 boinc boinc   1010319 May 16 14:01 agis_schedconf.cvmfs.json
[2024-05-16 22:30:16] -rw------- 1 boinc boinc   1324701 May 16 14:01 cric_ddmendpoints.json
[2024-05-16 22:30:16] drwx------ 4 boinc boinc      4096 May 16 14:01 pilot3
[2024-05-16 22:30:16] -rw------- 1 boinc boinc 349186763 May 16 22:28 HITS.38920995._002006.pool.root.1
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc       533 May 16 22:29 boinc_task_state.xml
[2024-05-16 22:30:16] -rw------- 1 boinc boinc      1041 May 16 22:29 memory_monitor_summary.json
[2024-05-16 22:30:16] -rw------- 1 boinc boinc         0 May 16 22:29 agis_ddmendpoints.agis.ALL.json
[2024-05-16 22:30:16] -rw------- 1 boinc boinc    530280 May 16 22:29 log.38920995._002006.job.log.tgz.1
[2024-05-16 22:30:16] -rw------- 1 boinc boinc        95 May 16 22:29 pilot_heartbeat.json
[2024-05-16 22:30:16] -rw------- 1 boinc boinc      7723 May 16 22:30 heartbeat.json
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc      8192 May 16 22:30 boinc_mmap_file
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc        29 May 16 22:30 wrapper_checkpoint.txt
[2024-05-16 22:30:16] -rw------- 1 boinc boinc      4531 May 16 22:30 pilotlog.txt
[2024-05-16 22:30:16] -rw------- 1 boinc boinc   3965840 May 16 22:30 log.38920995._002006.job.log.1
[2024-05-16 22:30:16] -rw------- 1 boinc boinc       357 May 16 22:30 output.list
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc       620 May 16 22:30 runtime_log
[2024-05-16 22:30:16] -rw------- 1 boinc boinc   4515840 May 16 22:30 result.tar.gz
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc     11410 May 16 22:30 runtime_log.err
[2024-05-16 22:30:16] -rw------- 1 boinc boinc       661 May 16 22:30 0plKDmzpFR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmmnIKDmY8ZQNm.diag
[2024-05-16 22:30:16] -rw-r--r-- 1 boinc boinc     21491 May 16 22:30 stderr.txt
[2024-05-16 22:30:16] HITS file was successfully produced:
[2024-05-16 22:30:16] -rw------- 1 boinc boinc 349186763 May 16 22:28 shared/HITS.pool.root.1
[2024-05-16 22:30:16]  *** Contents of shared directory: ***
[2024-05-16 22:30:16] total 961624
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc 630481217 May 16 14:00 ATLAS.root_0
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc     17537 May 16 14:00 start_atlas.sh
[2024-05-16 22:30:16] -rw-r--r-- 2 boinc boinc    479991 May 16 14:00 input.tar.gz
[2024-05-16 22:30:16] -rw------- 1 boinc boinc 349186763 May 16 22:28 HITS.pool.root.1
[2024-05-16 22:30:16] -rw------- 1 boinc boinc   4515840 May 16 22:30 result.tar.gz
22:30:17 (48231): run_atlas exited; CPU time 113261.066519
22:30:17 (48231): called boinc_finish(0)

</stderr_txt>
]]>

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