Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:56:51 (141744): wrapper (7.7.26015): starting
09:56:51 (141744): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 09:56:51] Arguments: --nthreads 4
[2024-05-19 09:56:51] Threads: 4
[2024-05-19 09:56:51] Checking for CVMFS
[2024-05-19 09:56:51] No cvmfs_config command found, will try listing directly
[2024-05-19 09:56:51] CVMFS is ok
[2024-05-19 09:56:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:56:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:56:51] Further information can be found at the LHC@home message board.
[2024-05-19 09:56:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:56:51] Checking for apptainer binary...
[2024-05-19 09:56:51] which: no apptainer in ((null))
[2024-05-19 09:56:51] apptainer is not installed, using version from CVMFS
[2024-05-19 09:56:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:56:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-19 09:56:52] apptainer works
[2024-05-19 09:56:52] Set ATHENA_PROC_NUMBER=4
[2024-05-19 09:56:52] Set ATHENA_CORE_NUMBER=4
[2024-05-19 09:56:52] Starting ATLAS job with PandaID=6206287736
[2024-05-19 09:56:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 18:16:59]  *** The last 200 lines of the pilot log: ***
[2024-05-19 18:16:59] 2024-05-19 16:06:57,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 18:16:59] 2024-05-19 16:06:57,780 | INFO     | fitting pss+swap vs Time
[2024-05-19 18:16:59] 2024-05-19 16:06:57,781 | INFO     | model: linear, x: [1716105444.0, 1716105505.0, 1716105566.0, 1716105627.0, 1716105688.0, 1716105749.0, 1716105810.0, 1716105871.0, 1716105932.0, 1716105993.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,781 | INFO     | sum of square deviations: 34723034300.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,788 | INFO     | sum of deviations: 242998448594.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,788 | INFO     | mean x: 1716120114.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,788 | INFO     | mean y: 2318395.458506224
[2024-05-19 18:16:59] 2024-05-19 16:06:57,788 | INFO     | -- intersect: -12007419054.799717
[2024-05-19 18:16:59] 2024-05-19 16:06:57,788 | INFO     | intersect: -12007419054.799717
[2024-05-19 18:16:59] 2024-05-19 16:06:57,789 | INFO     | chi2: 4.7296635303159515
[2024-05-19 18:16:59] 2024-05-19 16:06:57,790 | INFO     | model: linear, x: [1716105444.0, 1716105505.0, 1716105566.0, 1716105627.0, 1716105688.0, 1716105749.0, 1716105810.0, 1716105871.0, 1716105932.0, 1716105993.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,790 | INFO     | sum of square deviations: 33653609598.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,796 | INFO     | sum of deviations: 269679752977.00003
[2024-05-19 18:16:59] 2024-05-19 16:06:57,796 | INFO     | mean x: 1716119962.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,796 | INFO     | mean y: 2322164.362683438
[2024-05-19 18:16:59] 2024-05-19 16:06:57,796 | INFO     | -- intersect: -13749629348.6947
[2024-05-19 18:16:59] 2024-05-19 16:06:57,797 | INFO     | intersect: -13749629348.6947
[2024-05-19 18:16:59] 2024-05-19 16:06:57,797 | INFO     | chi2: 3.9824209151567973
[2024-05-19 18:16:59] 2024-05-19 16:06:57,798 | INFO     | current chi2=3.9824209151567973 (change=15.79906499414847 %)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,798 | INFO     | right removable region: 476
[2024-05-19 18:16:59] 2024-05-19 16:06:57,798 | INFO     | model: linear, x: [1716105749.0, 1716105810.0, 1716105871.0, 1716105932.0, 1716105993.0, 1716106054.0, 1716106115.0, 1716106176.0, 1716106237.0, 1716106298.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,799 | INFO     | sum of square deviations: 33653609598.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,804 | INFO     | sum of deviations: 129107774716.99997
[2024-05-19 18:16:59] 2024-05-19 16:06:57,805 | INFO     | mean x: 1716120267.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,805 | INFO     | mean y: 2334616.8616352202
[2024-05-19 18:16:59] 2024-05-19 16:06:57,805 | INFO     | -- intersect: -6581341591.002891
[2024-05-19 18:16:59] 2024-05-19 16:06:57,805 | INFO     | intersect: -6581341591.002891
[2024-05-19 18:16:59] 2024-05-19 16:06:57,806 | INFO     | chi2: 2.30472939552909
[2024-05-19 18:16:59] 2024-05-19 16:06:57,806 | INFO     | current chi2=2.30472939552909 (change=51.27075360104677 %)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,807 | INFO     | model: linear, x: [1716106054.0, 1716106115.0, 1716106176.0, 1716106237.0, 1716106298.0, 1716106359.0, 1716106420.0, 1716106481.0, 1716106542.0, 1716106603.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,807 | INFO     | sum of square deviations: 32606371358.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,813 | INFO     | sum of deviations: 37266930812.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,813 | INFO     | mean x: 1716120419.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,813 | INFO     | mean y: 2347990.7669491526
[2024-05-19 18:16:59] 2024-05-19 16:06:57,813 | INFO     | -- intersect: -1959064404.2641103
[2024-05-19 18:16:59] 2024-05-19 16:06:57,814 | INFO     | intersect: -1959064404.2641103
[2024-05-19 18:16:59] 2024-05-19 16:06:57,814 | INFO     | chi2: 0.8573426443832145
[2024-05-19 18:16:59] 2024-05-19 16:06:57,814 | INFO     | current chi2=0.8573426443832145 (change=62.800724195805344 %)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,815 | INFO     | model: linear, x: [1716106359.0, 1716106420.0, 1716106481.0, 1716106542.0, 1716106603.0, 1716106664.0, 1716106725.0, 1716106786.0, 1716106847.0, 1716106908.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,815 | INFO     | sum of square deviations: 31581087018.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,821 | INFO     | sum of deviations: 18821596237.999992
[2024-05-19 18:16:59] 2024-05-19 16:06:57,821 | INFO     | mean x: 1716120572.0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,821 | INFO     | mean y: 2350724.687366167
[2024-05-19 18:16:59] 2024-05-19 16:06:57,822 | INFO     | -- intersect: -1020417379.6372181
[2024-05-19 18:16:59] 2024-05-19 16:06:57,822 | INFO     | intersect: -1020417379.6372181
[2024-05-19 18:16:59] 2024-05-19 16:06:57,822 | INFO     | chi2: 0.7775521905712685
[2024-05-19 18:16:59] 2024-05-19 16:06:57,823 | INFO     | current chi2=0.7775521905712685 (change=9.306717020864923 %)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,823 | INFO     | left removable region: 30
[2024-05-19 18:16:59] 2024-05-19 16:06:57,823 | INFO     | model: linear, x: [1716107274.0, 1716107335.0, 1716107396.0, 1716107457.0, 1716107518.0, 1716107579.0, 1716107640.0, 1716107701.0, 1716107762.0, 1716107823.0, 1716
[2024-05-19 18:16:59] 2024-05-19 16:06:57,824 | INFO     | sum of square deviations: 27509380907.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,829 | INFO     | sum of deviations: 31636451319.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,829 | INFO     | mean x: 1716120846.5
[2024-05-19 18:16:59] 2024-05-19 16:06:57,829 | INFO     | mean y: 2357329.522421525
[2024-05-19 18:16:59] 2024-05-19 16:06:57,829 | INFO     | -- intersect: -1971223021.1671326
[2024-05-19 18:16:59] 2024-05-19 16:06:57,830 | INFO     | intersect: -1971223021.1671326
[2024-05-19 18:16:59] 2024-05-19 16:06:57,830 | INFO     | chi2: 0.002278084108843877
[2024-05-19 18:16:59] 2024-05-19 16:06:57,830 | INFO     | -- intersect: -1971223021.1671326
[2024-05-19 18:16:59] 2024-05-19 16:06:57,831 | INFO     | current memory leak: 1.15 B/s (using 446 data points, chi2=0.00)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,831 | INFO     | ..............................
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . Timing measurements:
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . get job = 0 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . initial setup = 1 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . payload setup = 3 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . stage-in = 0 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . payload execution = 29365 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,832 | INFO     | . stage-out = 1 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,833 | INFO     | . log creation = 0 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,833 | INFO     | ..............................
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | 
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | job summary report
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | --------------------------------------------------
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | PanDA job id: 6206287736
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | task id: 38920995
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | errors: (none)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | pilot state: finished 
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | transexitcode: 0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | exeerrorcode: 0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,895 | INFO     | exeerrordiag: 
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | exitcode: 0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | exitmsg: OK
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | cpuconsumptiontime: 114210 s
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | nevents: 400
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | neventsw: 0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | pid: 153155
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | pgrp: 153155
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | corecount: 4
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | event service: False
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | sizes: {0: 2392130, 3: 2392336, 11: 2392364, 29373: 2430127, 29376: 2439109, 29377: 2439165, 29382: 2439463}
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | --------------------------------------------------
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | 
[2024-05-19 18:16:59] 2024-05-19 16:06:57,896 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-05-19 18:16:59] 2024-05-19 16:06:57,914 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,914 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | job 6206287736 has completed (purged errors)
[2024-05-19 18:16:59] 2024-05-19 16:06:57,916 | INFO     | overall cleanup function is called
[2024-05-19 18:16:59] 2024-05-19 16:06:58,923 | INFO     | --- collectZombieJob: --- 10, [153155]
[2024-05-19 18:16:59] 2024-05-19 16:06:58,923 | INFO     | zombie collector waiting for pid 153155
[2024-05-19 18:16:59] 2024-05-19 16:06:58,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 18:16:59] 2024-05-19 16:06:59,929 | INFO     | collected zombie processes
[2024-05-19 18:16:59] 2024-05-19 16:06:59,929 | INFO     | will now attempt to kill all subprocesses of pid=153155
[2024-05-19 18:16:59] 2024-05-19 16:07:00,060 | INFO     | process IDs to be killed: [153155] (in reverse order)
[2024-05-19 18:16:59] 2024-05-19 16:07:00,128 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 18:16:59] 2024-05-19 16:07:00,129 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 18:16:59] 2024-05-19 16:07:00,134 | INFO     | did not find any defunct processes belonging to 153155
[2024-05-19 18:16:59] 2024-05-19 16:07:00,139 | INFO     | did not find any defunct processes belonging to 153155
[2024-05-19 18:16:59] 2024-05-19 16:07:00,139 | INFO     | ready for new job
[2024-05-19 18:16:59] 2024-05-19 16:07:00,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 18:16:59] 2024-05-19 16:07:00,141 | INFO     | *************************************
[2024-05-19 18:16:59] 2024-05-19 16:07:00,142 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 18:16:59] 2024-05-19 16:07:00,142 | INFO     | *************************************
[2024-05-19 18:16:59] 2024-05-19 16:07:00,142 | INFO     | 
[2024-05-19 18:16:59] 2024-05-19 16:07:00,143 | INFO     | architecture information:
[2024-05-19 18:16:59] 2024-05-19 16:07:00,144 | INFO     | executing command: cat /etc/os-release
[2024-05-19 18:16:59] 2024-05-19 16:07:00,155 | INFO     | cat /etc/os-release:
[2024-05-19 18:16:59] NAME="CentOS Linux"
[2024-05-19 18:16:59] VERSION="7 (Core)"
[2024-05-19 18:16:59] ID="centos"
[2024-05-19 18:16:59] ID_LIKE="rhel fedora"
[2024-05-19 18:16:59] VERSION_ID="7"
[2024-05-19 18:16:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 18:16:59] ANSI_COLOR="0;31"
[2024-05-19 18:16:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 18:16:59] HOME_URL="https://www.centos.org/"
[2024-05-19 18:16:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 18:16:59] 
[2024-05-19 18:16:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 18:16:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 18:16:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 18:16:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 18:16:59] 
[2024-05-19 18:16:59] 2024-05-19 16:07:00,155 | INFO     | *************************************
[2024-05-19 18:16:59] 2024-05-19 16:07:00,658 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-05-19 18:16:59] 2024-05-19 16:07:00,674 | INFO     | sufficient remaining disk space (1607255195648 B)
[2024-05-19 18:16:59] 2024-05-19 16:07:00,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 18:16:59] 2024-05-19 16:07:00,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 18:16:59] 2024-05-19 16:07:01,125 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 18:16:59] 2024-05-19 16:07:01,125 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 18:16:59] 2024-05-19 16:07:01,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:16:59] 2024-05-19 16:07:01,125 | INFO     | will abort loop
[2024-05-19 18:16:59] 2024-05-19 16:07:01,407 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 18:16:59] 2024-05-19 16:07:01,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 18:16:59] 2024-05-19 16:07:01,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 18:16:59] 2024-05-19 16:07:01,498 | INFO     | all data control threads have been joined
[2024-05-19 18:16:59] 2024-05-19 16:07:01,676 | INFO     | [job] retrieve thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:01,838 | INFO     | all job control threads have been joined
[2024-05-19 18:16:59] 2024-05-19 16:07:01,867 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:01,920 | INFO     | [payload] failed_post thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:01,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 18:16:59] 2024-05-19 16:07:02,110 | INFO     | all payload control threads have been joined
[2024-05-19 18:16:59] 2024-05-19 16:07:02,131 | INFO     | [job] job monitor thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,131 | INFO     | [data] copytool_in thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,141 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,373 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,503 | INFO     | [data] control thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,624 | INFO     | [job] validate thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,844 | INFO     | [job] control thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:02,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:16:59] 2024-05-19 16:07:03,031 | INFO     | [payload] validate_post thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:03,116 | INFO     | [payload] control thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:03,129 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:03,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 18:16:59] 2024-05-19 16:07:03,911 | INFO     | [job] queue monitor thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:03,941 | INFO     | [data] copytool_out thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:07,695 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 18:16:59] 2024-05-19 16:07:07,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47400267457600)>', '<ExcThread(monitor, started 47400442910464)>']
[2024-05-19 18:16:59] 2024-05-19 16:07:08,443 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 18:16:59] 2024-05-19 16:07:08,443 | INFO     | [monitor] control thread has ended
[2024-05-19 18:16:59] 2024-05-19 16:07:12,855 | INFO     | all workflow threads have been joined
[2024-05-19 18:16:59] 2024-05-19 16:07:12,855 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 18:16:59] 2024-05-19 16:07:12,855 | INFO     | traces error code: 0
[2024-05-19 18:16:59] 2024-05-19 16:07:12,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 18:16:59] 2024-05-19 16:07:12,931 [wrapper] ==== pilot stdout END ====
[2024-05-19 18:16:59] 2024-05-19 16:07:12,934 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 18:16:59] 2024-05-19 16:07:12,936 [wrapper] pilotpid: 146302
[2024-05-19 18:16:59] 2024-05-19 16:07:12,938 [wrapper] Pilot exit status: 0
[2024-05-19 18:16:59] 2024-05-19 16:07:12,947 [wrapper] pandaids: 6206287736
[2024-05-19 18:16:59] 2024-05-19 16:07:13,003 [wrapper] cleanup: SIGTERM to supervisor_pilot  794568 146303
[2024-05-19 18:16:59] 2024-05-19 16:07:13,006 [wrapper] Test setup, not cleaning
[2024-05-19 18:16:59] 2024-05-19 16:07:13,008 [wrapper] ==== wrapper stdout END ====
[2024-05-19 18:16:59] 2024-05-19 16:07:13,010 [wrapper] ==== wrapper stderr END ====
[2024-05-19 18:16:59] 2024-05-19 16:07:13,014 [wrapper] apfmon messages muted
[2024-05-19 18:16:59]  *** Error codes and diagnostics ***
[2024-05-19 18:16:59]     "exeErrorCode": 0,
[2024-05-19 18:16:59]     "exeErrorDiag": "",
[2024-05-19 18:16:59]     "pilotErrorCode": 0,
[2024-05-19 18:16:59]     "pilotErrorDiag": "",
[2024-05-19 18:16:59]  *** Listing of results directory ***
[2024-05-19 18:16:59] total 964084
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc    467845 May 15 00:02 pilot3.tar.gz
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc      5633 May 15 00:09 queuedata.json
[2024-05-19 18:16:59] -rwx------ 1 boinc boinc     32251 May 15 00:09 runpilot2-wrapper.sh
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc       100 May 19 09:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 18:16:59] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:09 run_atlas
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc       105 May 19 09:09 job.xml
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc 628924629 May 19 09:56 EVNT.38776180._000076.pool.root.1
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc     17537 May 19 09:56 start_atlas.sh
[2024-05-19 18:16:59] drwxrwx--x 2 boinc boinc      4096 May 19 09:56 shared
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc    479997 May 19 09:56 input.tar.gz
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc      6455 May 19 09:56 init_data.xml
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc         0 May 19 09:56 boinc_lockfile
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc      2610 May 19 09:56 pandaJob.out
[2024-05-19 18:16:59] -rw------- 1 boinc boinc       424 May 19 09:56 setup.sh.local
[2024-05-19 18:16:59] -rw------- 1 boinc boinc   1013987 May 19 09:57 agis_schedconf.cvmfs.json
[2024-05-19 18:16:59] -rw------- 1 boinc boinc   1324701 May 19 09:57 cric_ddmendpoints.json
[2024-05-19 18:16:59] drwx------ 4 boinc boinc      4096 May 19 09:57 pilot3
[2024-05-19 18:16:59] -rw------- 1 boinc boinc 345791775 May 19 18:06 HITS.38920995._001878.pool.root.1
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc       533 May 19 18:06 boinc_task_state.xml
[2024-05-19 18:16:59] -rw------- 1 boinc boinc        95 May 19 18:06 pilot_heartbeat.json
[2024-05-19 18:16:59] -rw------- 1 boinc boinc      1051 May 19 18:06 memory_monitor_summary.json
[2024-05-19 18:16:59] -rw------- 1 boinc boinc         0 May 19 18:06 agis_ddmendpoints.agis.ALL.json
[2024-05-19 18:16:59] -rw------- 1 boinc boinc    528794 May 19 18:06 log.38920995._001878.job.log.tgz.1
[2024-05-19 18:16:59] -rw------- 1 boinc boinc      7769 May 19 18:06 heartbeat.json
[2024-05-19 18:16:59] -rw------- 1 boinc boinc      4408 May 19 18:07 pilotlog.txt
[2024-05-19 18:16:59] -rw------- 1 boinc boinc   3957335 May 19 18:07 log.38920995._001878.job.log.1
[2024-05-19 18:16:59] -rw------- 1 boinc boinc       357 May 19 18:07 output.list
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc       620 May 19 18:07 runtime_log
[2024-05-19 18:16:59] -rw------- 1 boinc boinc   4505600 May 19 18:07 result.tar.gz
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc     11410 May 19 18:07 runtime_log.err
[2024-05-19 18:16:59] -rw------- 1 boinc boinc       660 May 19 18:07 SRWLDmxVFR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmFONKDmRtp4Fn.diag
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc        29 May 19 18:16 wrapper_checkpoint.txt
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc      8192 May 19 18:16 boinc_mmap_file
[2024-05-19 18:16:59] -rw-r--r-- 1 boinc boinc     21314 May 19 18:16 stderr.txt
[2024-05-19 18:16:59] HITS file was successfully produced:
[2024-05-19 18:16:59] -rw------- 1 boinc boinc 345791775 May 19 18:06 shared/HITS.pool.root.1
[2024-05-19 18:16:59]  *** Contents of shared directory: ***
[2024-05-19 18:16:59] total 956776
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc 628924629 May 19 09:56 ATLAS.root_0
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc     17537 May 19 09:56 start_atlas.sh
[2024-05-19 18:16:59] -rw-r--r-- 2 boinc boinc    479997 May 19 09:56 input.tar.gz
[2024-05-19 18:16:59] -rw------- 1 boinc boinc 345791775 May 19 18:06 HITS.pool.root.1
[2024-05-19 18:16:59] -rw------- 1 boinc boinc   4505600 May 19 18:07 result.tar.gz
18:17:01 (141744): run_atlas exited; CPU time 113684.470605
18:17:01 (141744): called boinc_finish(0)

</stderr_txt>
]]>

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