Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
21:15:33 (2095947): wrapper (7.7.26015): starting
21:15:33 (2095947): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 21:15:33] Arguments: --nthreads 4
[2024-05-17 21:15:33] Threads: 4
[2024-05-17 21:15:33] Checking for CVMFS
[2024-05-17 21:15:33] No cvmfs_config command found, will try listing directly
[2024-05-17 21:15:33] CVMFS is ok
[2024-05-17 21:15:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 21:15:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 21:15:33] Further information can be found at the LHC@home message board.
[2024-05-17 21:15:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 21:15:33] Checking for apptainer binary...
[2024-05-17 21:15:33] which: no apptainer in ((null))
[2024-05-17 21:15:33] apptainer is not installed, using version from CVMFS
[2024-05-17 21:15:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 21:15:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-17 21:15:34] apptainer works
[2024-05-17 21:15:34] Set ATHENA_PROC_NUMBER=4
[2024-05-17 21:15:34] Set ATHENA_CORE_NUMBER=4
[2024-05-17 21:15:34] Starting ATLAS job with PandaID=6206285802
[2024-05-17 21:15:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:45:48 (695799): wrapper (7.7.26015): starting
13:45:48 (695799): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 13:45:48] Arguments: --nthreads 4
[2024-05-18 13:45:48] Threads: 4
[2024-05-18 13:45:48] This job has been restarted, cleaning up previous attempt
[2024-05-18 13:45:48] Checking for CVMFS
[2024-05-18 13:45:48] No cvmfs_config command found, will try listing directly
[2024-05-18 13:45:48] CVMFS is ok
[2024-05-18 13:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 13:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 13:45:48] Further information can be found at the LHC@home message board.
[2024-05-18 13:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 13:45:48] Checking for apptainer binary...
[2024-05-18 13:45:48] which: no apptainer in ((null))
[2024-05-18 13:45:48] apptainer is not installed, using version from CVMFS
[2024-05-18 13:45:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 13:45:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-18 13:45:48] apptainer works
[2024-05-18 13:45:48] Set ATHENA_PROC_NUMBER=4
[2024-05-18 13:45:48] Set ATHENA_CORE_NUMBER=4
[2024-05-18 13:45:48] Starting ATLAS job with PandaID=6206285802
[2024-05-18 13:45:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 13:48:57] Job failed
[2024-05-18 13:48:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 13:48:57] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 13:48:57] + mv ATLAS.root_0 EVNT.38776180._000067.pool.root.1
[2024-05-18 13:48:57] mv: 'ATLAS.root_0' and 'EVNT.38776180._000067.pool.root.1' are the same file
[2024-05-18 13:48:57] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-18 13:48:57] + umask 077
[2024-05-18 13:48:57] ++ date +%s
[2024-05-18 13:48:57] + ACCOUNTING_STARTTIME=1716032749
[2024-05-18 13:48:57] + echo 'Detecting resource accounting method available for the job.'
[2024-05-18 13:48:57] Detecting resource accounting method available for the job.
[2024-05-18 13:48:57] + JOB_ACCOUNTING=
[2024-05-18 13:48:57] + command -v arc-job-cgroup
[2024-05-18 13:48:57] + '[' -z '' ']'
[2024-05-18 13:48:57] + GNU_TIME=/usr/bin/time
[2024-05-18 13:48:57] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-18 13:48:57] Looking for /usr/bin/time tool for accounting measurements
[2024-05-18 13:48:57] + '[' '!' -z /usr/bin/time ']'
[2024-05-18 13:48:57] + /usr/bin/time --version
[2024-05-18 13:48:57] + echo 'GNU time found and will be used for job accounting.'
[2024-05-18 13:48:57] GNU time found and will be used for job accounting.
[2024-05-18 13:48:57] + JOB_ACCOUNTING=gnutime
[2024-05-18 13:48:57] + '[' -z gnutime ']'
[2024-05-18 13:48:57] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 13:48:57] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 13:48:57] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206285802.out
[2024-05-18 13:48:57] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206285802.out
[2024-05-18 13:48:57] + export PILOT_NOKILL=YES
[2024-05-18 13:48:57] + PILOT_NOKILL=YES
[2024-05-18 13:48:57] + export GRID_GLOBAL_JOBID=FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 13:48:57] + GRID_GLOBAL_JOBID=FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 13:48:57] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 13:48:57] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 13:48:57] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 13:48:57] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 13:48:57] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 13:48:57] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot84/slots/1
[2024-05-18 13:48:57] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot84/slots/1/log.38920995._001658.job.log.1
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot84/slots/1/log.38920995._001658.job.log.1
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1.diag
[2024-05-18 13:48:57] + '[' '!' -z '' ']'
[2024-05-18 13:48:57] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-18 13:48:57] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-18 13:48:57] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-18 13:48:57] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-18 13:48:57] + '[' '!' -z '' ']'
[2024-05-18 13:48:57] + '[' -z yes ']'
[2024-05-18 13:48:57] ++ pwd
[2024-05-18 13:48:57] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 13:48:57] + runtimeenvironments=
[2024-05-18 13:48:57] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 13:48:57] + RTE_function_0 1
[2024-05-18 13:48:57] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 13:48:57] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 13:48:57] + export BOINC_APP=ATLAS
[2024-05-18 13:48:57] + BOINC_APP=ATLAS
[2024-05-18 13:48:57] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 13:48:57] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 13:48:57] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 13:48:57] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 13:48:57] + '[' -z 1 ']'
[2024-05-18 13:48:57] + '[' 1 == 1 ']'
[2024-05-18 13:48:57] + shift
[2024-05-18 13:48:57] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-18 13:48:57] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 13:48:57] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-18 13:48:57] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 13:48:57] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 13:48:57] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-18 13:48:57] + grep '<use_http_proxy/>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-18 13:48:57] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-18 13:48:57] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-18 13:48:57] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-18 13:48:57] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 13:48:57] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-18 13:48:57] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 13:48:57] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 13:48:57] + '[' 0 -ne 0 ']'
[2024-05-18 13:48:57] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-18 13:48:57] + '[' -f /etc/os-release ']'
[2024-05-18 13:48:57] +++ cat /etc/os-release
[2024-05-18 13:48:57] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-18 13:48:57] +++ NAME='CentOS Linux'
[2024-05-18 13:48:57] +++ VERSION='7 (Core)'
[2024-05-18 13:48:57] +++ ID=centos
[2024-05-18 13:48:57] +++ ID_LIKE='rhel fedora'
[2024-05-18 13:48:57] +++ VERSION_ID=7
[2024-05-18 13:48:57] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-18 13:48:57] +++ ANSI_COLOR='0;31'
[2024-05-18 13:48:57] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-18 13:48:57] +++ HOME_URL=https://www.centos.org/
[2024-05-18 13:48:57] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-18 13:48:57] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-18 13:48:57] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-18 13:48:57] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-18 13:48:57] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-18 13:48:57] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-18 13:48:57] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-18 13:48:57] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-18 13:48:57] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-18 13:48:57] + HOME=/scratch/boinc/var/slot84/slots/1
[2024-05-18 13:48:57] + export HOME
[2024-05-18 13:48:57] + cd /scratch/boinc/var/slot84/slots/1
[2024-05-18 13:48:57] + '[' '!' -z '' ']'
[2024-05-18 13:48:57] + '[' -z '' ']'
[2024-05-18 13:48:57] ++ /bin/hostname -f
[2024-05-18 13:48:57] + nodename=skurut13.grid.cesnet.cz
[2024-05-18 13:48:57] + echo nodename=skurut13.grid.cesnet.cz
[2024-05-18 13:48:57] + echo Processors=1
[2024-05-18 13:48:57] + echo Benchmark=HEPSPEC:1.0
[2024-05-18 13:48:57] + executable=./runpilot2-wrapper.sh
[2024-05-18 13:48:57] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-18 13:48:57] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-18 13:48:57] ++ head -n 1
[2024-05-18 13:48:57] ++ tr -d '\0'
[2024-05-18 13:48:57] + line1='#!/bin/bash'
[2024-05-18 13:48:57] ++ echo '#!/bin/bash'
[2024-05-18 13:48:57] ++ sed -n 's/^#! *//p'
[2024-05-18 13:48:57] + shebang=/bin/bash
[2024-05-18 13:48:57] ++ echo /bin/bash
[2024-05-18 13:48:57] ++ awk '{print $1}'
[2024-05-18 13:48:57] + interpreter=/bin/bash
[2024-05-18 13:48:57] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-18 13:48:57] + '[' x/bin/bash = x ']'
[2024-05-18 13:48:57] + type /bin/bash
[2024-05-18 13:48:57] + '[' xgnutime = xgnutime ']'
[2024-05-18 13:48:57] + /usr/bin/time -o /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-18 13:48:57] + RESULT=2
[2024-05-18 13:48:57] + sed -i -e /nodename=/d /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 13:48:57] ++ grep domain_name init_data.xml
[2024-05-18 13:48:57] ++ awk -F '>' '{print $2}'
[2024-05-18 13:48:57] ++ awk -F '<' '{print $1}'
[2024-05-18 13:48:57] ++ sed -e 's# #_#g'
[2024-05-18 13:48:57] + hostname=skurut13.grid.cesnet.cz
[2024-05-18 13:48:57] ++ grep user_name init_data.xml
[2024-05-18 13:48:57] ++ awk -F '>' '{print $2}'
[2024-05-18 13:48:57] ++ awk -F '<' '{print $1}'
[2024-05-18 13:48:57] ++ sed -e 's# #_#g'
[2024-05-18 13:48:57] + username=praguelcg2
[2024-05-18 13:48:57] + nodename=praguelcg2@skurut13.grid.cesnet.cz
[2024-05-18 13:48:57] + echo nodename=praguelcg2@skurut13.grid.cesnet.cz
[2024-05-18 13:48:57] + '[' -n 4 ']'
[2024-05-18 13:48:57] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 13:48:57] + echo exitcode=2
[2024-05-18 13:48:57] + runtimeenvironments=
[2024-05-18 13:48:57] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 13:48:57] + RTE_function_0 2
[2024-05-18 13:48:57] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 13:48:57] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 13:48:57] + export BOINC_APP=ATLAS
[2024-05-18 13:48:57] + BOINC_APP=ATLAS
[2024-05-18 13:48:57] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 13:48:57] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 13:48:57] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 13:48:57] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 13:48:57] + '[' -z 2 ']'
[2024-05-18 13:48:57] + '[' 2 == 1 ']'
[2024-05-18 13:48:57] + '[' 0 -ne 0 ']'
[2024-05-18 13:48:57] + echo 'zip all output files'
[2024-05-18 13:48:57] + flist='*.diag '
[2024-05-18 13:48:57] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 13:48:57] + '[' -e ./heartbeat.json ']'
[2024-05-18 13:48:57] + flist='*.diag  ./heartbeat.json'
[2024-05-18 13:48:57] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 13:48:57] + '[' -e ./output.list ']'
[2024-05-18 13:48:57] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 13:48:57] + '[' -e ./log.38920995._001658.job.log.1 ']'
[2024-05-18 13:48:57] + flist='*.diag  ./heartbeat.json ./log.38920995._001658.job.log.1'
[2024-05-18 13:48:57] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 13:48:57] + '[' -e ./log.38920995._001658.job.log.1 ']'
[2024-05-18 13:48:57] + flist='*.diag  ./heartbeat.json ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1'
[2024-05-18 13:48:57] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 13:48:57] + '[' -e ./gmlog/ ']'
[2024-05-18 13:48:57] + '[' -f output.list ']'
[2024-05-18 13:48:57] + tar cvf result.tar.gz FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag ./heartbeat.json ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1
[2024-05-18 13:48:57] + '[' xgnutime = xcgroup ']'
[2024-05-18 13:48:57] + '[' -n '' ']'
[2024-05-18 13:48:57] + '[' -n '' ']'
[2024-05-18 13:48:57] ++ date +%s
[2024-05-18 13:48:57] + ACCOUNTING_ENDTIME=1716032936
[2024-05-18 13:48:57] ++ date -d '1970-01-01 UTC 1716032749 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 13:48:57] + echo LRMSStartTime=20240518134549Z
[2024-05-18 13:48:57] ++ date -d '1970-01-01 UTC 1716032936 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 13:48:57] + echo LRMSEndTime=20240518134856Z
[2024-05-18 13:48:57] + echo walltime=187
[2024-05-18 13:48:57] + echo exitcode=2
[2024-05-18 13:48:57] + exit 2
[2024-05-18 13:48:57] ./log.38920995._001658.job.log.1
[2024-05-18 13:48:57] ./runtime_log
[2024-05-18 13:48:57] ./pilotlog.txt
[2024-05-18 13:48:57] ./pilot3/pilot/util/loggingsupport.py
[2024-05-18 13:48:57] ./pilot3/pilot/util/realtimelogger.py
[2024-05-18 13:48:57] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-18 13:48:57] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-18 13:48:57] ./PanDA_Pilot-6206285802/PoolFileCatalog.xml
[2024-05-18 13:48:57] ./PanDA_Pilot-6206285802/prmon.log
[2024-05-18 13:48:57] ./PanDA_Pilot-6206285802/log.EVNTtoHITS
[2024-05-18 13:48:57] ./PanDA_Pilot-6206285802/pilotlog.txt
[2024-05-18 13:48:57] ./runtime_log.err
16:16:06 (1076107): wrapper (7.7.26015): starting
16:16:06 (1076107): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 16:16:06] Arguments: --nthreads 4
[2024-05-18 16:16:06] Threads: 4
[2024-05-18 16:16:06] This job has been restarted, cleaning up previous attempt
[2024-05-18 16:16:06] Checking for CVMFS
[2024-05-18 16:16:06] No cvmfs_config command found, will try listing directly
[2024-05-18 16:16:06] CVMFS is ok
[2024-05-18 16:16:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 16:16:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 16:16:06] Further information can be found at the LHC@home message board.
[2024-05-18 16:16:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 16:16:06] Checking for apptainer binary...
[2024-05-18 16:16:06] which: no apptainer in ((null))
[2024-05-18 16:16:06] apptainer is not installed, using version from CVMFS
[2024-05-18 16:16:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 16:16:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-18 16:16:07] apptainer works
[2024-05-18 16:16:07] Set ATHENA_PROC_NUMBER=4
[2024-05-18 16:16:07] Set ATHENA_CORE_NUMBER=4
[2024-05-18 16:16:07] Starting ATLAS job with PandaID=6206285802
[2024-05-18 16:16:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 16:19:15] Job failed
[2024-05-18 16:19:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 16:19:15] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 16:19:15] + mv ATLAS.root_0 EVNT.38776180._000067.pool.root.1
[2024-05-18 16:19:15] mv: 'ATLAS.root_0' and 'EVNT.38776180._000067.pool.root.1' are the same file
[2024-05-18 16:19:15] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-18 16:19:15] + umask 077
[2024-05-18 16:19:15] ++ date +%s
[2024-05-18 16:19:15] + ACCOUNTING_STARTTIME=1716041767
[2024-05-18 16:19:15] + echo 'Detecting resource accounting method available for the job.'
[2024-05-18 16:19:15] Detecting resource accounting method available for the job.
[2024-05-18 16:19:15] + JOB_ACCOUNTING=
[2024-05-18 16:19:15] + command -v arc-job-cgroup
[2024-05-18 16:19:15] + '[' -z '' ']'
[2024-05-18 16:19:15] + GNU_TIME=/usr/bin/time
[2024-05-18 16:19:15] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-18 16:19:15] Looking for /usr/bin/time tool for accounting measurements
[2024-05-18 16:19:15] + '[' '!' -z /usr/bin/time ']'
[2024-05-18 16:19:15] + /usr/bin/time --version
[2024-05-18 16:19:15] + echo 'GNU time found and will be used for job accounting.'
[2024-05-18 16:19:15] GNU time found and will be used for job accounting.
[2024-05-18 16:19:15] + JOB_ACCOUNTING=gnutime
[2024-05-18 16:19:15] + '[' -z gnutime ']'
[2024-05-18 16:19:15] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 16:19:15] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 16:19:15] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206285802.out
[2024-05-18 16:19:15] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206285802.out
[2024-05-18 16:19:15] + export PILOT_NOKILL=YES
[2024-05-18 16:19:15] + PILOT_NOKILL=YES
[2024-05-18 16:19:15] + export GRID_GLOBAL_JOBID=FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 16:19:15] + GRID_GLOBAL_JOBID=FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 16:19:15] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 16:19:15] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm
[2024-05-18 16:19:15] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 16:19:15] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 16:19:15] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 16:19:15] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot84/slots/1
[2024-05-18 16:19:15] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot84/slots/1/log.38920995._001658.job.log.1
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot84/slots/1/log.38920995._001658.job.log.1
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1.diag
[2024-05-18 16:19:15] + '[' '!' -z '' ']'
[2024-05-18 16:19:15] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-18 16:19:15] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-18 16:19:15] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-18 16:19:15] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-18 16:19:15] + '[' '!' -z '' ']'
[2024-05-18 16:19:15] + '[' -z yes ']'
[2024-05-18 16:19:15] ++ pwd
[2024-05-18 16:19:15] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 16:19:15] + runtimeenvironments=
[2024-05-18 16:19:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 16:19:15] + RTE_function_0 1
[2024-05-18 16:19:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 16:19:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 16:19:15] + export BOINC_APP=ATLAS
[2024-05-18 16:19:15] + BOINC_APP=ATLAS
[2024-05-18 16:19:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 16:19:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 16:19:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 16:19:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 16:19:15] + '[' -z 1 ']'
[2024-05-18 16:19:15] + '[' 1 == 1 ']'
[2024-05-18 16:19:15] + shift
[2024-05-18 16:19:15] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-18 16:19:15] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 16:19:15] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-18 16:19:15] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 16:19:15] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot84/slots/1/
[2024-05-18 16:19:15] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-18 16:19:15] + grep '<use_http_proxy/>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-18 16:19:15] + '[' -e /scratch/boinc/var/slot84/slots/1/init_data.xml ']'
[2024-05-18 16:19:15] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot84/slots/1/init_data.xml
[2024-05-18 16:19:15] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-18 16:19:15] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 16:19:15] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-18 16:19:15] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 16:19:15] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 16:19:15] + '[' 0 -ne 0 ']'
[2024-05-18 16:19:15] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-18 16:19:15] + '[' -f /etc/os-release ']'
[2024-05-18 16:19:15] +++ cat /etc/os-release
[2024-05-18 16:19:15] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-18 16:19:15] +++ NAME='CentOS Linux'
[2024-05-18 16:19:15] +++ VERSION='7 (Core)'
[2024-05-18 16:19:15] +++ ID=centos
[2024-05-18 16:19:15] +++ ID_LIKE='rhel fedora'
[2024-05-18 16:19:15] +++ VERSION_ID=7
[2024-05-18 16:19:15] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-18 16:19:15] +++ ANSI_COLOR='0;31'
[2024-05-18 16:19:15] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-18 16:19:15] +++ HOME_URL=https://www.centos.org/
[2024-05-18 16:19:15] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-18 16:19:15] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-18 16:19:15] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-18 16:19:15] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-18 16:19:15] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-18 16:19:15] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-18 16:19:15] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-18 16:19:15] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-18 16:19:15] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-18 16:19:15] + HOME=/scratch/boinc/var/slot84/slots/1
[2024-05-18 16:19:15] + export HOME
[2024-05-18 16:19:15] + cd /scratch/boinc/var/slot84/slots/1
[2024-05-18 16:19:15] + '[' '!' -z '' ']'
[2024-05-18 16:19:15] + '[' -z '' ']'
[2024-05-18 16:19:15] ++ /bin/hostname -f
[2024-05-18 16:19:15] + nodename=skurut13.grid.cesnet.cz
[2024-05-18 16:19:15] + echo nodename=skurut13.grid.cesnet.cz
[2024-05-18 16:19:15] + echo Processors=1
[2024-05-18 16:19:15] + echo Benchmark=HEPSPEC:1.0
[2024-05-18 16:19:15] + executable=./runpilot2-wrapper.sh
[2024-05-18 16:19:15] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-18 16:19:15] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-18 16:19:15] ++ head -n 1
[2024-05-18 16:19:15] ++ tr -d '\0'
[2024-05-18 16:19:15] + line1='#!/bin/bash'
[2024-05-18 16:19:15] ++ echo '#!/bin/bash'
[2024-05-18 16:19:15] ++ sed -n 's/^#! *//p'
[2024-05-18 16:19:15] + shebang=/bin/bash
[2024-05-18 16:19:15] ++ echo /bin/bash
[2024-05-18 16:19:15] ++ awk '{print $1}'
[2024-05-18 16:19:15] + interpreter=/bin/bash
[2024-05-18 16:19:15] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-18 16:19:15] + '[' x/bin/bash = x ']'
[2024-05-18 16:19:15] + type /bin/bash
[2024-05-18 16:19:15] + '[' xgnutime = xgnutime ']'
[2024-05-18 16:19:15] + /usr/bin/time -o /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-18 16:19:15] + RESULT=2
[2024-05-18 16:19:15] + sed -i -e /nodename=/d /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 16:19:15] ++ grep domain_name init_data.xml
[2024-05-18 16:19:15] ++ awk -F '>' '{print $2}'
[2024-05-18 16:19:15] ++ awk -F '<' '{print $1}'
[2024-05-18 16:19:15] ++ sed -e 's# #_#g'
[2024-05-18 16:19:15] + hostname=skurut13.grid.cesnet.cz
[2024-05-18 16:19:15] ++ grep user_name init_data.xml
[2024-05-18 16:19:15] ++ awk -F '>' '{print $2}'
[2024-05-18 16:19:15] ++ awk -F '<' '{print $1}'
[2024-05-18 16:19:15] ++ sed -e 's# #_#g'
[2024-05-18 16:19:15] + username=praguelcg2
[2024-05-18 16:19:15] + nodename=praguelcg2@skurut13.grid.cesnet.cz
[2024-05-18 16:19:15] + echo nodename=praguelcg2@skurut13.grid.cesnet.cz
[2024-05-18 16:19:15] + '[' -n 4 ']'
[2024-05-18 16:19:15] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot84/slots/1/FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag
[2024-05-18 16:19:15] + echo exitcode=2
[2024-05-18 16:19:15] + runtimeenvironments=
[2024-05-18 16:19:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 16:19:15] + RTE_function_0 2
[2024-05-18 16:19:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 16:19:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 16:19:15] + export BOINC_APP=ATLAS
[2024-05-18 16:19:15] + BOINC_APP=ATLAS
[2024-05-18 16:19:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 16:19:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 16:19:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 16:19:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 16:19:15] + '[' -z 2 ']'
[2024-05-18 16:19:15] + '[' 2 == 1 ']'
[2024-05-18 16:19:15] + '[' 0 -ne 0 ']'
[2024-05-18 16:19:15] + echo 'zip all output files'
[2024-05-18 16:19:15] + flist='*.diag '
[2024-05-18 16:19:15] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 16:19:15] + '[' -e ./heartbeat.json ']'
[2024-05-18 16:19:15] + flist='*.diag  ./heartbeat.json'
[2024-05-18 16:19:15] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 16:19:15] + '[' -e ./output.list ']'
[2024-05-18 16:19:15] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 16:19:15] + '[' -e ./log.38920995._001658.job.log.1 ']'
[2024-05-18 16:19:15] + flist='*.diag  ./heartbeat.json ./log.38920995._001658.job.log.1'
[2024-05-18 16:19:15] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 16:19:15] + '[' -e ./log.38920995._001658.job.log.1 ']'
[2024-05-18 16:19:15] + flist='*.diag  ./heartbeat.json ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1'
[2024-05-18 16:19:15] + for f in ./heartbeat.json ./output.list ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1 ./gmlog/
[2024-05-18 16:19:15] + '[' -e ./gmlog/ ']'
[2024-05-18 16:19:15] + '[' -f output.list ']'
[2024-05-18 16:19:15] + tar cvf result.tar.gz FT8LDm16ER5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0MNKDm9qqfWm.diag ./heartbeat.json ./log.38920995._001658.job.log.1 ./log.38920995._001658.job.log.1
[2024-05-18 16:19:15] + '[' xgnutime = xcgroup ']'
[2024-05-18 16:19:15] + '[' -n '' ']'
[2024-05-18 16:19:15] + '[' -n '' ']'
[2024-05-18 16:19:15] ++ date +%s
[2024-05-18 16:19:15] + ACCOUNTING_ENDTIME=1716041955
[2024-05-18 16:19:15] ++ date -d '1970-01-01 UTC 1716041767 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 16:19:15] + echo LRMSStartTime=20240518161607Z
[2024-05-18 16:19:15] ++ date -d '1970-01-01 UTC 1716041955 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 16:19:15] + echo LRMSEndTime=20240518161915Z
[2024-05-18 16:19:15] + echo walltime=188
[2024-05-18 16:19:15] + echo exitcode=2
[2024-05-18 16:19:15] + exit 2
[2024-05-18 16:19:15] ./log.38920995._001658.job.log.1
[2024-05-18 16:19:15] ./runtime_log
[2024-05-18 16:19:15] ./pilotlog.txt
[2024-05-18 16:19:15] ./pilot3/pilot/util/loggingsupport.py
[2024-05-18 16:19:15] ./pilot3/pilot/util/realtimelogger.py
[2024-05-18 16:19:15] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-18 16:19:15] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-18 16:19:15] ./PanDA_Pilot-6206285802/PoolFileCatalog.xml
[2024-05-18 16:19:15] ./PanDA_Pilot-6206285802/prmon.log
[2024-05-18 16:19:15] ./PanDA_Pilot-6206285802/log.EVNTtoHITS
[2024-05-18 16:19:15] ./PanDA_Pilot-6206285802/pilotlog.txt
[2024-05-18 16:19:15] ./runtime_log.err
16:29:16 (1076107): run_atlas exited; CPU time 13.182654
16:29:16 (1076107): app exit status: 0x1
16:29:16 (1076107): called boinc_finish(195)

</stderr_txt>
]]>

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