Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:56:37 (1992309): wrapper (7.7.26015): starting
08:56:37 (1992309): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 08:56:37] Arguments: --nthreads 4
[2024-05-19 08:56:37] Threads: 4
[2024-05-19 08:56:37] Checking for CVMFS
[2024-05-19 08:56:37] No cvmfs_config command found, will try listing directly
[2024-05-19 08:56:37] CVMFS is ok
[2024-05-19 08:56:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 08:56:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 08:56:37] Further information can be found at the LHC@home message board.
[2024-05-19 08:56:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 08:56:37] Checking for apptainer binary...
[2024-05-19 08:56:37] which: no apptainer in ((null))
[2024-05-19 08:56:37] apptainer is not installed, using version from CVMFS
[2024-05-19 08:56:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 08:56:38] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-19 08:56:38] apptainer works
[2024-05-19 08:56:38] Set ATHENA_PROC_NUMBER=4
[2024-05-19 08:56:38] Set ATHENA_CORE_NUMBER=4
[2024-05-19 08:56:38] Starting ATLAS job with PandaID=6206267438
[2024-05-19 08:56:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 11:22:22]  *** The last 200 lines of the pilot log: ***
[2024-05-19 11:22:22] 2024-05-19 09:21:59,843 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 11:22:22] 2024-05-19 09:21:59,843 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 11:22:22] 2024-05-19 09:21:59,846 | INFO     | fitting pss+swap vs Time
[2024-05-19 11:22:22] 2024-05-19 09:21:59,847 | INFO     | model: linear, x: [1716101833.0, 1716101894.0, 1716101955.0, 1716102016.0, 1716102077.0, 1716102138.0, 1716102199.0, 1716102260.0, 1716102321.0, 1716102382.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,847 | INFO     | sum of square deviations: 906703512.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | sum of deviations: 55451685525.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | mean x: 1716106164.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | mean y: 2219788.3426573426
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | -- intersect: -104950477619.58586
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | intersect: -104950477619.58586
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | chi2: 4.9840039977782675
[2024-05-19 11:22:22] 2024-05-19 09:21:59,848 | INFO     | model: linear, x: [1716101833.0, 1716101894.0, 1716101955.0, 1716102016.0, 1716102077.0, 1716102138.0, 1716102199.0, 1716102260.0, 1716102321.0, 1716102382.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,849 | INFO     | sum of square deviations: 814878534.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,849 | INFO     | sum of deviations: 62177133439.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,849 | INFO     | mean x: 1716106011.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | mean y: 2230531.5434782607
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | -- intersect: -130940662127.71042
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | intersect: -130940662127.71042
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | chi2: 4.184685463798875
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | current chi2=4.184685463798875 (change=16.03767842753952 %)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | right removable region: 137
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | model: linear, x: [1716102138.0, 1716102199.0, 1716102260.0, 1716102321.0, 1716102382.0, 1716102443.0, 1716102504.0, 1716102565.0, 1716102626.0, 1716102687.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,850 | INFO     | sum of square deviations: 814878534.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,851 | INFO     | sum of deviations: 22966531750.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,851 | INFO     | mean x: 1716106316.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,851 | INFO     | mean y: 2273538.3260869565
[2024-05-19 11:22:22] 2024-05-19 09:21:59,851 | INFO     | -- intersect: -48364456638.60049
[2024-05-19 11:22:22] 2024-05-19 09:21:59,852 | INFO     | intersect: -48364456638.60049
[2024-05-19 11:22:22] 2024-05-19 09:21:59,852 | INFO     | chi2: 2.4382477213745717
[2024-05-19 11:22:22] 2024-05-19 09:21:59,852 | INFO     | current chi2=2.4382477213745717 (change=51.07853600315176 %)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,852 | INFO     | model: linear, x: [1716102443.0, 1716102504.0, 1716102565.0, 1716102626.0, 1716102687.0, 1716102748.0, 1716102809.0, 1716102870.0, 1716102931.0, 1716102992.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,852 | INFO     | sum of square deviations: 729472282.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,853 | INFO     | sum of deviations: -3550772179.999998
[2024-05-19 11:22:22] 2024-05-19 09:21:59,853 | INFO     | mean x: 1716106469.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,853 | INFO     | mean y: 2320901.932330827
[2024-05-19 11:22:22] 2024-05-19 09:21:59,853 | INFO     | -- intersect: 8355624047.785417
[2024-05-19 11:22:22] 2024-05-19 09:21:59,853 | INFO     | intersect: 8355624047.785417
[2024-05-19 11:22:22] 2024-05-19 09:21:59,854 | INFO     | chi2: 0.8818835918580077
[2024-05-19 11:22:22] 2024-05-19 09:21:59,854 | INFO     | current chi2=0.8818835918580077 (change=63.83125536724208 %)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,854 | INFO     | model: linear, x: [1716102748.0, 1716102809.0, 1716102870.0, 1716102931.0, 1716102992.0, 1716103053.0, 1716103114.0, 1716103175.0, 1716103236.0, 1716103297.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,854 | INFO     | sum of square deviations: 650252192.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | sum of deviations: -6260706757.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | mean x: 1716106621.5
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | mean y: 2325997.328125
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | -- intersect: 16525208123.89463
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | intersect: 16525208123.89463
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | chi2: 0.8404368989279489
[2024-05-19 11:22:22] 2024-05-19 09:21:59,855 | INFO     | current chi2=0.8404368989279489 (change=4.699791822040397 %)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,856 | INFO     | left removable region: 30
[2024-05-19 11:22:22] 2024-05-19 09:21:59,856 | INFO     | model: linear, x: [1716103663.0, 1716103724.0, 1716103785.0, 1716103846.0, 1716103907.0, 1716103968.0, 1716104029.0, 1716104090.0, 1716104151.0, 1716104212.0, 1716
[2024-05-19 11:22:22] 2024-05-19 09:21:59,856 | INFO     | sum of square deviations: 379832238.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,856 | INFO     | sum of deviations: 735139853.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | mean x: 1716106896.0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | mean y: 2345060.2056074766
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | -- intersect: -3319064880.931949
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | intersect: -3319064880.931949
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | chi2: 0.00011310524029458743
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | -- intersect: -3319064880.931949
[2024-05-19 11:22:22] 2024-05-19 09:21:59,857 | INFO     | current memory leak: 1.94 B/s (using 107 data points, chi2=0.00)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | ..............................
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . Timing measurements:
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . get job = 0 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . initial setup = 1 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . payload setup = 5 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . stage-in = 0 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . payload execution = 8680 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . stage-out = 0 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | . log creation = 0 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,858 | INFO     | ..............................
[2024-05-19 11:22:22] 2024-05-19 09:21:59,940 | INFO     | 
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | job summary report
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | --------------------------------------------------
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | PanDA job id: 6206267438
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | task id: 38776125
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | errors: (none)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | pilot state: finished 
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | transexitcode: 0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | exeerrorcode: 0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | exeerrordiag: 
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | exitcode: 0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,941 | INFO     | exitmsg: OK
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | cpuconsumptiontime: 32061 s
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | nevents: 400
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | neventsw: 0
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | pid: 2007478
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | pgrp: 2007478
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | corecount: 4
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | event service: False
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | sizes: {0: 2392254, 4: 2392460, 11: 2392488, 8689: 2420600, 8690: 2429582, 8693: 2429638, 8697: 2429936}
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | --------------------------------------------------
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | 
[2024-05-19 11:22:22] 2024-05-19 09:21:59,942 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-05-19 11:22:22] 2024-05-19 09:21:59,968 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,968 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,968 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,968 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,970 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 11:22:22] 2024-05-19 09:21:59,970 | INFO     | job 6206267438 has completed (purged errors)
[2024-05-19 11:22:22] 2024-05-19 09:21:59,970 | INFO     | overall cleanup function is called
[2024-05-19 11:22:22] 2024-05-19 09:22:00,977 | INFO     | --- collectZombieJob: --- 10, [2007478]
[2024-05-19 11:22:22] 2024-05-19 09:22:00,977 | INFO     | zombie collector waiting for pid 2007478
[2024-05-19 11:22:22] 2024-05-19 09:22:00,977 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 11:22:22] 2024-05-19 09:22:01,982 | INFO     | collected zombie processes
[2024-05-19 11:22:22] 2024-05-19 09:22:01,982 | INFO     | will now attempt to kill all subprocesses of pid=2007478
[2024-05-19 11:22:22] 2024-05-19 09:22:02,230 | INFO     | process IDs to be killed: [2007478] (in reverse order)
[2024-05-19 11:22:22] 2024-05-19 09:22:02,399 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 11:22:22] 2024-05-19 09:22:02,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 11:22:22] 2024-05-19 09:22:02,412 | INFO     | did not find any defunct processes belonging to 2007478
[2024-05-19 11:22:22] 2024-05-19 09:22:02,422 | INFO     | did not find any defunct processes belonging to 2007478
[2024-05-19 11:22:22] 2024-05-19 09:22:02,422 | INFO     | ready for new job
[2024-05-19 11:22:22] 2024-05-19 09:22:02,422 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 11:22:22] 2024-05-19 09:22:02,424 | INFO     | *************************************
[2024-05-19 11:22:22] 2024-05-19 09:22:02,424 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 11:22:22] 2024-05-19 09:22:02,424 | INFO     | *************************************
[2024-05-19 11:22:22] 2024-05-19 09:22:02,424 | INFO     | 
[2024-05-19 11:22:22] 2024-05-19 09:22:02,429 | INFO     | architecture information:
[2024-05-19 11:22:22] 2024-05-19 09:22:02,429 | INFO     | executing command: cat /etc/os-release
[2024-05-19 11:22:22] 2024-05-19 09:22:02,448 | INFO     | cat /etc/os-release:
[2024-05-19 11:22:22] NAME="CentOS Linux"
[2024-05-19 11:22:22] VERSION="7 (Core)"
[2024-05-19 11:22:22] ID="centos"
[2024-05-19 11:22:22] ID_LIKE="rhel fedora"
[2024-05-19 11:22:22] VERSION_ID="7"
[2024-05-19 11:22:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 11:22:22] ANSI_COLOR="0;31"
[2024-05-19 11:22:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 11:22:22] HOME_URL="https://www.centos.org/"
[2024-05-19 11:22:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 11:22:22] 
[2024-05-19 11:22:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 11:22:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 11:22:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 11:22:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 11:22:22] 
[2024-05-19 11:22:22] 2024-05-19 09:22:02,448 | INFO     | *************************************
[2024-05-19 11:22:22] 2024-05-19 09:22:02,951 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-05-19 11:22:22] 2024-05-19 09:22:02,976 | INFO     | sufficient remaining disk space (3081021423616 B)
[2024-05-19 11:22:22] 2024-05-19 09:22:02,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 11:22:22] 2024-05-19 09:22:02,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 11:22:22] 2024-05-19 09:22:03,079 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 11:22:22] 2024-05-19 09:22:03,080 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 11:22:22] 2024-05-19 09:22:03,080 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 11:22:22] 2024-05-19 09:22:03,169 | INFO     | all job control threads have been joined
[2024-05-19 11:22:22] 2024-05-19 09:22:03,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 11:22:22] 2024-05-19 09:22:03,785 | INFO     | all data control threads have been joined
[2024-05-19 11:22:22] 2024-05-19 09:22:03,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:22:22] 2024-05-19 09:22:03,841 | INFO     | aborting loop
[2024-05-19 11:22:22] 2024-05-19 09:22:03,922 | INFO     | all payload control threads have been joined
[2024-05-19 11:22:22] 2024-05-19 09:22:03,981 | INFO     | [job] retrieve thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,175 | INFO     | [job] control thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,457 | INFO     | [payload] validate_post thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,467 | INFO     | [payload] failed_post thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,790 | INFO     | [data] control thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,847 | INFO     | [job] job monitor thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,923 | INFO     | [payload] control thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,934 | INFO     | [job] validate thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:04,949 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:22:22] 2024-05-19 09:22:05,102 | INFO     | [data] copytool_in thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:05,110 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:05,188 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:05,322 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:05,684 | INFO     | [data] copytool_out thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:05,954 | INFO     | [job] queue monitor thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:06,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 11:22:22] 2024-05-19 09:22:10,435 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:13,949 | INFO     | job.realtimelogging is not enabled
[2024-05-19 11:22:22] 2024-05-19 09:22:14,954 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 11:22:22] 2024-05-19 09:22:16,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47328678982720)>', '<ExcThread(monitor, started 47328858638080)>']
[2024-05-19 11:22:22] 2024-05-19 09:22:17,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 11:22:22] 2024-05-19 09:22:17,148 | INFO     | [monitor] control thread has ended
[2024-05-19 11:22:22] 2024-05-19 09:22:21,464 | INFO     | all workflow threads have been joined
[2024-05-19 11:22:22] 2024-05-19 09:22:21,464 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 11:22:22] 2024-05-19 09:22:21,465 | INFO     | traces error code: 0
[2024-05-19 11:22:22] 2024-05-19 09:22:21,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 11:22:22] 2024-05-19 09:22:21,543 [wrapper] ==== pilot stdout END ====
[2024-05-19 11:22:22] 2024-05-19 09:22:21,546 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 11:22:22] 2024-05-19 09:22:21,551 [wrapper] pilotpid: 1996964
[2024-05-19 11:22:22] 2024-05-19 09:22:21,553 [wrapper] Pilot exit status: 0
[2024-05-19 11:22:22] 2024-05-19 09:22:21,562 [wrapper] pandaids: 6206267438
[2024-05-19 11:22:22] 2024-05-19 09:22:21,656 [wrapper] cleanup: SIGTERM to supervisor_pilot 2912235 1996965
[2024-05-19 11:22:22] 2024-05-19 09:22:21,658 [wrapper] Test setup, not cleaning
[2024-05-19 11:22:22] 2024-05-19 09:22:21,660 [wrapper] ==== wrapper stdout END ====
[2024-05-19 11:22:22] 2024-05-19 09:22:21,661 [wrapper] ==== wrapper stderr END ====
[2024-05-19 11:22:22] 2024-05-19 09:22:21,665 [wrapper] apfmon messages muted
[2024-05-19 11:22:22]  *** Error codes and diagnostics ***
[2024-05-19 11:22:22]     "exeErrorCode": 0,
[2024-05-19 11:22:22]     "exeErrorDiag": "",
[2024-05-19 11:22:22]     "pilotErrorCode": 0,
[2024-05-19 11:22:22]     "pilotErrorDiag": "",
[2024-05-19 11:22:22]  *** Listing of results directory ***
[2024-05-19 11:22:22] total 832004
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc    467845 May 14 23:06 pilot3.tar.gz
[2024-05-19 11:22:22] -rwx------ 1 boinc boinc     32251 May 14 23:07 runpilot2-wrapper.sh
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc      5633 May 14 23:07 queuedata.json
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc       100 May 19 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 11:22:22] -rwxr-xr-x 1 boinc boinc      7986 May 19 08:51 run_atlas
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc       105 May 19 08:51 job.xml
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc 599612111 May 19 08:56 EVNT.38776119._000043.pool.root.1
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc     17537 May 19 08:56 start_atlas.sh
[2024-05-19 11:22:22] drwxrwx--x 2 boinc boinc      4096 May 19 08:56 shared
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc    480016 May 19 08:56 input.tar.gz
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc      6643 May 19 08:56 init_data.xml
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc         0 May 19 08:56 boinc_lockfile
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc      2633 May 19 08:56 pandaJob.out
[2024-05-19 11:22:22] -rw------- 1 boinc boinc       424 May 19 08:56 setup.sh.local
[2024-05-19 11:22:22] -rw------- 1 boinc boinc   1013987 May 19 08:56 agis_schedconf.cvmfs.json
[2024-05-19 11:22:22] -rw------- 1 boinc boinc         0 May 19 08:56 agis_ddmendpoints.agis.ALL.json
[2024-05-19 11:22:22] -rw------- 1 boinc boinc   1324701 May 19 08:56 cric_ddmendpoints.json
[2024-05-19 11:22:22] drwx------ 4 boinc boinc      4096 May 19 08:56 pilot3
[2024-05-19 11:22:22] -rw------- 1 boinc boinc        95 May 19 11:21 pilot_heartbeat.json
[2024-05-19 11:22:22] -rw------- 1 boinc boinc 246471350 May 19 11:21 HITS.38776125._010765.pool.root.1
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc       530 May 19 11:21 boinc_task_state.xml
[2024-05-19 11:22:22] -rw------- 1 boinc boinc      1039 May 19 11:21 memory_monitor_summary.json
[2024-05-19 11:22:22] -rw------- 1 boinc boinc    281756 May 19 11:21 log.38776125._010765.job.log.tgz.1
[2024-05-19 11:22:22] -rw------- 1 boinc boinc      7710 May 19 11:21 heartbeat.json
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc      8192 May 19 11:22 boinc_mmap_file
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc        27 May 19 11:22 wrapper_checkpoint.txt
[2024-05-19 11:22:22] -rw------- 1 boinc boinc      4294 May 19 11:22 pilotlog.txt
[2024-05-19 11:22:22] -rw------- 1 boinc boinc    899397 May 19 11:22 log.38776125._010765.job.log.1
[2024-05-19 11:22:22] -rw------- 1 boinc boinc       357 May 19 11:22 output.list
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc       620 May 19 11:22 runtime_log
[2024-05-19 11:22:22] -rw------- 1 boinc boinc   1198080 May 19 11:22 result.tar.gz
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc     11409 May 19 11:22 runtime_log.err
[2024-05-19 11:22:22] -rw------- 1 boinc boinc       655 May 19 11:22 ocXNDmtXER5n7Olcko1bjSoqABFKDmABFKDmOtvXDm8QYKDm1FYdsm.diag
[2024-05-19 11:22:22] -rw-r--r-- 1 boinc boinc     21255 May 19 11:22 stderr.txt
[2024-05-19 11:22:22] HITS file was successfully produced:
[2024-05-19 11:22:22] -rw------- 1 boinc boinc 246471350 May 19 11:21 shared/HITS.pool.root.1
[2024-05-19 11:22:22]  *** Contents of shared directory: ***
[2024-05-19 11:22:22] total 827928
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc 599612111 May 19 08:56 ATLAS.root_0
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc     17537 May 19 08:56 start_atlas.sh
[2024-05-19 11:22:22] -rw-r--r-- 2 boinc boinc    480016 May 19 08:56 input.tar.gz
[2024-05-19 11:22:22] -rw------- 1 boinc boinc 246471350 May 19 11:21 HITS.pool.root.1
[2024-05-19 11:22:22] -rw------- 1 boinc boinc   1198080 May 19 11:22 result.tar.gz
11:22:24 (1992309): run_atlas exited; CPU time 31871.532046
11:22:24 (1992309): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN