Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:25:43 (805228): wrapper (7.7.26015): starting
13:25:43 (805228): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 13:25:43] Arguments: --nthreads 4
[2024-05-19 13:25:43] Threads: 4
[2024-05-19 13:25:43] Checking for CVMFS
[2024-05-19 13:25:43] No cvmfs_config command found, will try listing directly
[2024-05-19 13:25:43] CVMFS is ok
[2024-05-19 13:25:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 13:25:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 13:25:43] Further information can be found at the LHC@home message board.
[2024-05-19 13:25:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 13:25:43] Checking for apptainer binary...
[2024-05-19 13:25:43] which: no apptainer in ((null))
[2024-05-19 13:25:43] apptainer is not installed, using version from CVMFS
[2024-05-19 13:25:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 13:25:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-19 13:25:44] apptainer works
[2024-05-19 13:25:44] Set ATHENA_PROC_NUMBER=4
[2024-05-19 13:25:44] Set ATHENA_CORE_NUMBER=4
[2024-05-19 13:25:44] Starting ATLAS job with PandaID=6206250786
[2024-05-19 13:25:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 19:24:46]  *** The last 200 lines of the pilot log: ***
[2024-05-19 19:24:46] 2024-05-19 17:24:24,733 | INFO     | fitting pss+swap vs Time
[2024-05-19 19:24:46] 2024-05-19 17:24:24,734 | INFO     | model: linear, x: [1716117978.0, 1716118039.0, 1716118100.0, 1716118161.0, 1716118222.0, 1716118283.0, 1716118344.0, 1716118405.0, 1716118466.0, 1716118527.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,734 | INFO     | sum of square deviations: 13639518992.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,736 | INFO     | sum of deviations: 45467911539.00001
[2024-05-19 19:24:46] 2024-05-19 17:24:24,736 | INFO     | mean x: 1716128714.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,736 | INFO     | mean y: 2352027.6940509914
[2024-05-19 19:24:46] 2024-05-19 17:24:24,736 | INFO     | -- intersect: -5718435384.490803
[2024-05-19 19:24:46] 2024-05-19 17:24:24,737 | INFO     | intersect: -5718435384.490803
[2024-05-19 19:24:46] 2024-05-19 17:24:24,737 | INFO     | chi2: 4.477698850803092
[2024-05-19 19:24:46] 2024-05-19 17:24:24,737 | INFO     | model: linear, x: [1716117978.0, 1716118039.0, 1716118100.0, 1716118161.0, 1716118222.0, 1716118283.0, 1716118344.0, 1716118405.0, 1716118466.0, 1716118527.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,738 | INFO     | sum of square deviations: 13068103627.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | sum of deviations: 66749566620.50001
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | mean x: 1716128561.5
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | mean y: 2357639.9051724137
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | -- intersect: -8763324131.129585
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | intersect: -8763324131.129585
[2024-05-19 19:24:46] 2024-05-19 17:24:24,740 | INFO     | chi2: 3.735999985865251
[2024-05-19 19:24:46] 2024-05-19 17:24:24,741 | INFO     | current chi2=3.735999985865251 (change=16.564286470601182 %)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,741 | INFO     | right removable region: 347
[2024-05-19 19:24:46] 2024-05-19 17:24:24,741 | INFO     | model: linear, x: [1716118283.0, 1716118344.0, 1716118405.0, 1716118466.0, 1716118527.0, 1716118588.0, 1716118649.0, 1716118710.0, 1716118771.0, 1716118832.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,741 | INFO     | sum of square deviations: 13068103627.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,743 | INFO     | sum of deviations: -32023211205.499996
[2024-05-19 19:24:46] 2024-05-19 17:24:24,743 | INFO     | mean x: 1716128866.5
[2024-05-19 19:24:46] 2024-05-19 17:24:24,743 | INFO     | mean y: 2372666.2442528736
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | -- intersect: 4207723244.750559
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | intersect: 4207723244.750559
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | chi2: 2.2657460989815306
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | current chi2=2.2657460989815306 (change=49.39931928260069 %)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | model: linear, x: [1716118588.0, 1716118649.0, 1716118710.0, 1716118771.0, 1716118832.0, 1716118893.0, 1716118954.0, 1716119015.0, 1716119076.0, 1716119137.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,744 | INFO     | sum of square deviations: 12512874612.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,747 | INFO     | sum of deviations: -90937746347.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,747 | INFO     | mean x: 1716129019.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,748 | INFO     | mean y: 2388847.682215743
[2024-05-19 19:24:46] 2024-05-19 17:24:24,748 | INFO     | -- intersect: 12474415481.664757
[2024-05-19 19:24:46] 2024-05-19 17:24:24,748 | INFO     | intersect: 12474415481.664757
[2024-05-19 19:24:46] 2024-05-19 17:24:24,748 | INFO     | chi2: 1.0863073689464982
[2024-05-19 19:24:46] 2024-05-19 17:24:24,748 | INFO     | current chi2=1.0863073689464982 (change=52.05520294463704 %)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,749 | INFO     | model: linear, x: [1716118893.0, 1716118954.0, 1716119015.0, 1716119076.0, 1716119137.0, 1716119198.0, 1716119259.0, 1716119320.0, 1716119381.0, 1716119442.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,749 | INFO     | sum of square deviations: 11973599384.5
[2024-05-19 19:24:46] 2024-05-19 17:24:24,753 | INFO     | sum of deviations: -92029036926.49997
[2024-05-19 19:24:46] 2024-05-19 17:24:24,753 | INFO     | mean x: 1716129171.5
[2024-05-19 19:24:46] 2024-05-19 17:24:24,753 | INFO     | mean y: 2389138.9437869824
[2024-05-19 19:24:46] 2024-05-19 17:24:24,753 | INFO     | -- intersect: 13192551079.64349
[2024-05-19 19:24:46] 2024-05-19 17:24:24,753 | INFO     | intersect: 13192551079.64349
[2024-05-19 19:24:46] 2024-05-19 17:24:24,754 | INFO     | chi2: 1.0567908919640627
[2024-05-19 19:24:46] 2024-05-19 17:24:24,754 | INFO     | current chi2=1.0567908919640627 (change=2.71713861345344 %)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,754 | INFO     | left removable region: 30
[2024-05-19 19:24:46] 2024-05-19 17:24:24,754 | INFO     | model: linear, x: [1716119808.0, 1716119869.0, 1716119930.0, 1716119991.0, 1716120052.0, 1716120113.0, 1716120174.0, 1716120235.0, 1716120296.0, 1716120357.0, 1716
[2024-05-19 19:24:46] 2024-05-19 17:24:24,755 | INFO     | sum of square deviations: 9877610318.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,758 | INFO     | sum of deviations: -37377520029.99999
[2024-05-19 19:24:46] 2024-05-19 17:24:24,758 | INFO     | mean x: 1716129446.0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,758 | INFO     | mean y: 2385565.539432177
[2024-05-19 19:24:46] 2024-05-19 17:24:24,758 | INFO     | -- intersect: 6496331031.787151
[2024-05-19 19:24:46] 2024-05-19 17:24:24,758 | INFO     | intersect: 6496331031.787151
[2024-05-19 19:24:46] 2024-05-19 17:24:24,759 | INFO     | chi2: 0.21666438926418594
[2024-05-19 19:24:46] 2024-05-19 17:24:24,759 | INFO     | -- intersect: 6496331031.787151
[2024-05-19 19:24:46] 2024-05-19 17:24:24,759 | INFO     | current memory leak: -3.78 B/s (using 317 data points, chi2=0.22)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | ..............................
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . Timing measurements:
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . get job = 0 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . initial setup = 1 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . payload setup = 4 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . stage-in = 0 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . payload execution = 21481 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . stage-out = 1 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | . log creation = 0 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,760 | INFO     | ..............................
[2024-05-19 19:24:46] 2024-05-19 17:24:24,840 | INFO     | 
[2024-05-19 19:24:46] 2024-05-19 17:24:24,840 | INFO     | job summary report
[2024-05-19 19:24:46] 2024-05-19 17:24:24,840 | INFO     | --------------------------------------------------
[2024-05-19 19:24:46] 2024-05-19 17:24:24,840 | INFO     | PanDA job id: 6206250786
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | task id: 38920995
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | errors: (none)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | pilot state: finished 
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | transexitcode: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | exeerrorcode: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | exeerrordiag: 
[2024-05-19 19:24:46] 2024-05-19 17:24:24,841 | INFO     | exitcode: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | exitmsg: OK
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | cpuconsumptiontime: 82957 s
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | nevents: 400
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | neventsw: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | pid: 818765
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | pgrp: 818765
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | corecount: 4
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | event service: False
[2024-05-19 19:24:46] 2024-05-19 17:24:24,842 | INFO     | sizes: {0: 2392181, 4: 2392387, 11: 2392415, 21487: 2426612, 21490: 2435594, 21491: 2435650, 21497: 2435948}
[2024-05-19 19:24:46] 2024-05-19 17:24:24,843 | INFO     | --------------------------------------------------
[2024-05-19 19:24:46] 2024-05-19 17:24:24,843 | INFO     | 
[2024-05-19 19:24:46] 2024-05-19 17:24:24,843 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-19 19:24:46] 2024-05-19 17:24:24,871 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 19:24:46] 2024-05-19 17:24:24,873 | INFO     | job 6206250786 has completed (purged errors)
[2024-05-19 19:24:46] 2024-05-19 17:24:24,874 | INFO     | overall cleanup function is called
[2024-05-19 19:24:46] 2024-05-19 17:24:25,880 | INFO     | --- collectZombieJob: --- 10, [818765]
[2024-05-19 19:24:46] 2024-05-19 17:24:25,880 | INFO     | zombie collector waiting for pid 818765
[2024-05-19 19:24:46] 2024-05-19 17:24:25,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 19:24:46] 2024-05-19 17:24:26,884 | INFO     | collected zombie processes
[2024-05-19 19:24:46] 2024-05-19 17:24:26,885 | INFO     | will now attempt to kill all subprocesses of pid=818765
[2024-05-19 19:24:46] 2024-05-19 17:24:27,057 | INFO     | process IDs to be killed: [818765] (in reverse order)
[2024-05-19 19:24:46] 2024-05-19 17:24:27,154 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 19:24:46] 2024-05-19 17:24:27,155 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 19:24:46] 2024-05-19 17:24:27,164 | INFO     | did not find any defunct processes belonging to 818765
[2024-05-19 19:24:46] 2024-05-19 17:24:27,172 | INFO     | did not find any defunct processes belonging to 818765
[2024-05-19 19:24:46] 2024-05-19 17:24:27,172 | INFO     | ready for new job
[2024-05-19 19:24:46] 2024-05-19 17:24:27,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 19:24:46] 2024-05-19 17:24:27,175 | INFO     | *************************************
[2024-05-19 19:24:46] 2024-05-19 17:24:27,175 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 19:24:46] 2024-05-19 17:24:27,175 | INFO     | *************************************
[2024-05-19 19:24:46] 2024-05-19 17:24:27,175 | INFO     | 
[2024-05-19 19:24:46] 2024-05-19 17:24:27,179 | INFO     | architecture information:
[2024-05-19 19:24:46] 2024-05-19 17:24:27,180 | INFO     | executing command: cat /etc/os-release
[2024-05-19 19:24:46] 2024-05-19 17:24:27,201 | INFO     | cat /etc/os-release:
[2024-05-19 19:24:46] NAME="CentOS Linux"
[2024-05-19 19:24:46] VERSION="7 (Core)"
[2024-05-19 19:24:46] ID="centos"
[2024-05-19 19:24:46] ID_LIKE="rhel fedora"
[2024-05-19 19:24:46] VERSION_ID="7"
[2024-05-19 19:24:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 19:24:46] ANSI_COLOR="0;31"
[2024-05-19 19:24:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 19:24:46] HOME_URL="https://www.centos.org/"
[2024-05-19 19:24:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 19:24:46] 
[2024-05-19 19:24:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 19:24:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 19:24:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 19:24:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 19:24:46] 
[2024-05-19 19:24:46] 2024-05-19 17:24:27,201 | INFO     | *************************************
[2024-05-19 19:24:46] 2024-05-19 17:24:27,705 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-19 19:24:46] 2024-05-19 17:24:27,732 | INFO     | sufficient remaining disk space (573315219456 B)
[2024-05-19 19:24:46] 2024-05-19 17:24:27,733 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 19:24:46] 2024-05-19 17:24:27,733 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 19:24:46] 2024-05-19 17:24:28,060 | INFO     | all data control threads have been joined
[2024-05-19 19:24:46] 2024-05-19 17:24:28,074 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 19:24:46] 2024-05-19 17:24:28,075 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 19:24:46] 2024-05-19 17:24:28,075 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:24:46] 2024-05-19 17:24:28,075 | INFO     | will abort loop
[2024-05-19 19:24:46] 2024-05-19 17:24:28,126 | INFO     | all payload control threads have been joined
[2024-05-19 19:24:46] 2024-05-19 17:24:28,195 | INFO     | all job control threads have been joined
[2024-05-19 19:24:46] 2024-05-19 17:24:28,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 19:24:46] 2024-05-19 17:24:28,724 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 19:24:46] 2024-05-19 17:24:28,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 19:24:46] 2024-05-19 17:24:28,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 19:24:46] 2024-05-19 17:24:28,739 | INFO     | [job] retrieve thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:28,849 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:28,881 | INFO     | [data] copytool_in thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:28,921 | INFO     | [payload] validate_post thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,061 | INFO     | [data] control thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,084 | INFO     | [job] job monitor thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,131 | INFO     | [payload] control thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,200 | INFO     | [job] control thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,529 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,671 | INFO     | [payload] failed_post thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:29,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 19:24:46] 2024-05-19 17:24:29,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 19:24:46] 2024-05-19 17:24:30,054 | INFO     | [job] validate thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:30,220 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:30,650 | INFO     | [data] copytool_out thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:30,855 | INFO     | [job] queue monitor thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:33,850 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:37,786 | INFO     | job.realtimelogging is not enabled
[2024-05-19 19:24:46] 2024-05-19 17:24:38,791 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 19:24:46] 2024-05-19 17:24:40,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47415416022080)>', '<ExcThread(monitor, started 47415593576192)>']
[2024-05-19 19:24:46] 2024-05-19 17:24:41,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 19:24:46] 2024-05-19 17:24:41,785 | INFO     | [monitor] control thread has ended
[2024-05-19 19:24:46] 2024-05-19 17:24:45,869 | INFO     | all workflow threads have been joined
[2024-05-19 19:24:46] 2024-05-19 17:24:45,870 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 19:24:46] 2024-05-19 17:24:45,870 | INFO     | traces error code: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:45,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 19:24:46] 2024-05-19 17:24:45,985 [wrapper] ==== pilot stdout END ====
[2024-05-19 19:24:46] 2024-05-19 17:24:45,989 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 19:24:46] 2024-05-19 17:24:45,992 [wrapper] pilotpid: 809570
[2024-05-19 19:24:46] 2024-05-19 17:24:45,996 [wrapper] Pilot exit status: 0
[2024-05-19 19:24:46] 2024-05-19 17:24:46,008 [wrapper] pandaids: 6206250786
[2024-05-19 19:24:46] 2024-05-19 17:24:46,097 [wrapper] cleanup: SIGTERM to supervisor_pilot 1346099 809571
[2024-05-19 19:24:46] 2024-05-19 17:24:46,102 [wrapper] Test setup, not cleaning
[2024-05-19 19:24:46] 2024-05-19 17:24:46,105 [wrapper] ==== wrapper stdout END ====
[2024-05-19 19:24:46] 2024-05-19 17:24:46,109 [wrapper] ==== wrapper stderr END ====
[2024-05-19 19:24:46] 2024-05-19 17:24:46,116 [wrapper] apfmon messages muted
[2024-05-19 19:24:46]  *** Error codes and diagnostics ***
[2024-05-19 19:24:46]     "exeErrorCode": 0,
[2024-05-19 19:24:46]     "exeErrorDiag": "",
[2024-05-19 19:24:46]     "pilotErrorCode": 0,
[2024-05-19 19:24:46]     "pilotErrorDiag": "",
[2024-05-19 19:24:46]  *** Listing of results directory ***
[2024-05-19 19:24:46] total 974220
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc    467845 May 14 22:00 pilot3.tar.gz
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc      5633 May 14 22:22 queuedata.json
[2024-05-19 19:24:46] -rwx------ 1 boinc boinc     32251 May 14 22:22 runpilot2-wrapper.sh
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc       100 May 19 13:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 19:24:46] -rwxr-xr-x 1 boinc boinc      7986 May 19 13:25 run_atlas
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc       105 May 19 13:25 job.xml
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc      6662 May 19 13:25 init_data.xml
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc 634044711 May 19 13:25 EVNT.38776180._000045.pool.root.1
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc     17537 May 19 13:25 start_atlas.sh
[2024-05-19 19:24:46] drwxrwx--x 2 boinc boinc      4096 May 19 13:25 shared
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc    479994 May 19 13:25 input.tar.gz
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc         0 May 19 13:25 boinc_lockfile
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc      2611 May 19 13:25 pandaJob.out
[2024-05-19 19:24:46] -rw------- 1 boinc boinc       424 May 19 13:25 setup.sh.local
[2024-05-19 19:24:46] -rw------- 1 boinc boinc   1014061 May 19 13:25 agis_schedconf.cvmfs.json
[2024-05-19 19:24:46] -rw------- 1 boinc boinc   1324701 May 19 13:25 cric_ddmendpoints.json
[2024-05-19 19:24:46] drwx------ 4 boinc boinc      4096 May 19 13:25 pilot3
[2024-05-19 19:24:46] -rw------- 1 boinc boinc 354510125 May 19 19:23 HITS.38920995._001102.pool.root.1
[2024-05-19 19:24:46] -rw------- 1 boinc boinc        95 May 19 19:23 pilot_heartbeat.json
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc       532 May 19 19:23 boinc_task_state.xml
[2024-05-19 19:24:46] -rw------- 1 boinc boinc      1052 May 19 19:24 memory_monitor_summary.json
[2024-05-19 19:24:46] -rw------- 1 boinc boinc         0 May 19 19:24 agis_ddmendpoints.agis.ALL.json
[2024-05-19 19:24:46] -rw------- 1 boinc boinc    412004 May 19 19:24 log.38920995._001102.job.log.tgz.1
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc      8192 May 19 19:24 boinc_mmap_file
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc        28 May 19 19:24 wrapper_checkpoint.txt
[2024-05-19 19:24:46] -rw------- 1 boinc boinc      7765 May 19 19:24 heartbeat.json
[2024-05-19 19:24:46] -rw------- 1 boinc boinc      4479 May 19 19:24 pilotlog.txt
[2024-05-19 19:24:46] -rw------- 1 boinc boinc   2346724 May 19 19:24 log.38920995._001102.job.log.1
[2024-05-19 19:24:46] -rw------- 1 boinc boinc       357 May 19 19:24 output.list
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc       620 May 19 19:24 runtime_log
[2024-05-19 19:24:46] -rw------- 1 boinc boinc   2775040 May 19 19:24 result.tar.gz
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc     11410 May 19 19:24 runtime_log.err
[2024-05-19 19:24:46] -rw------- 1 boinc boinc       659 May 19 19:24 kX9KDm5pDR5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm4gIKDmAGNfUn.diag
[2024-05-19 19:24:46] -rw-r--r-- 1 boinc boinc     21301 May 19 19:24 stderr.txt
[2024-05-19 19:24:46] HITS file was successfully produced:
[2024-05-19 19:24:46] -rw------- 1 boinc boinc 354510125 May 19 19:23 shared/HITS.pool.root.1
[2024-05-19 19:24:46]  *** Contents of shared directory: ***
[2024-05-19 19:24:46] total 968604
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc 634044711 May 19 13:25 ATLAS.root_0
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc     17537 May 19 13:25 start_atlas.sh
[2024-05-19 19:24:46] -rw-r--r-- 2 boinc boinc    479994 May 19 13:25 input.tar.gz
[2024-05-19 19:24:46] -rw------- 1 boinc boinc 354510125 May 19 19:23 HITS.pool.root.1
[2024-05-19 19:24:46] -rw------- 1 boinc boinc   2775040 May 19 19:24 result.tar.gz
19:24:49 (805228): run_atlas exited; CPU time 82345.611260
19:24:49 (805228): called boinc_finish(0)

</stderr_txt>
]]>

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