Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:59 (350505): wrapper (7.7.26015): starting
07:26:59 (350505): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 07:26:59] Arguments: --nthreads 12
[2024-05-16 07:26:59] Threads: 12
[2024-05-16 07:26:59] Checking for CVMFS
[2024-05-16 07:26:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 07:26:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 07:26:59] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 07:26:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 07:26:59] 2.11.3.0 11199 9818 96748 132786 3 56 41230664 46080000 911 130560 0 10655220 99.932 1560669 33183 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-16 07:26:59] CVMFS is ok
[2024-05-16 07:26:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 07:26:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 07:26:59] Further information can be found at the LHC@home message board.
[2024-05-16 07:26:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 07:26:59] Checking for apptainer binary...
[2024-05-16 07:26:59] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 07:26:59] Running /usr/bin/apptainer --version
[2024-05-16 07:26:59] apptainer version 1.3.1-1.el7
[2024-05-16 07:26:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 07:26:59] minis01.farm.particle.cz
[2024-05-16 07:26:59] apptainer works
[2024-05-16 07:26:59] Set ATHENA_PROC_NUMBER=12
[2024-05-16 07:26:59] Set ATHENA_CORE_NUMBER=12
[2024-05-16 07:26:59] Starting ATLAS job with PandaID=6206225019
[2024-05-16 07:26:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 08:34:24]  *** The last 200 lines of the pilot log: ***
[2024-05-16 08:34:24]  direct_access_lan=False
[2024-05-16 08:34:24]  direct_access_wan=False
[2024-05-16 08:34:24]  domain=
[2024-05-16 08:34:24]  filesize=355508
[2024-05-16 08:34:24]  filetype=log
[2024-05-16 08:34:24]  guid=08bd1eae-9d32-4d17-9db0-b5231e6dd413
[2024-05-16 08:34:24]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-16 08:34:24]  is_tar=False
[2024-05-16 08:34:24]  lfn=log.38776104._003187.job.log.tgz.1
[2024-05-16 08:34:24]  mtime=0
[2024-05-16 08:34:24]  protocol_id=None
[2024-05-16 08:34:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-16 08:34:24]  replicas=None
[2024-05-16 08:34:24]  scope=mc23_13p6TeV
[2024-05-16 08:34:24]  status=None
[2024-05-16 08:34:24]  status_code=0
[2024-05-16 08:34:24]  storage_token=
[2024-05-16 08:34:24]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6206225019/log.38776104._003187.job.log.tgz.1
[2024-05-16 08:34:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/cd/log.38776104._003187.job.log.tgz.1
[2024-05-16 08:34:24]  workdir=None
[2024-05-16 08:34:24] ]
[2024-05-16 08:34:24] 2024-05-16 06:33:56,522 | INFO     | transferring file log.38776104._003187.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6206225019/log.38776104._003187.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-16 08:34:24] 2024-05-16 06:33:56,523 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6206225019/log.38776104._003187.job.log.tgz.1 /scratch/.boinc/slots/2/log.38776104._003187.j
[2024-05-16 08:34:24] 2024-05-16 06:33:56,535 | INFO     | adding to output.list: log.38776104._003187.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/cd/log.38776104._003187.job.log.tg
[2024-05-16 08:34:24] 2024-05-16 06:33:56,536 | INFO     | summary of transferred files:
[2024-05-16 08:34:24] 2024-05-16 06:33:56,536 | INFO     |  -- lfn=log.38776104._003187.job.log.tgz.1, status_code=0, status=transferred
[2024-05-16 08:34:24] 2024-05-16 06:33:56,536 | INFO     | stage-out finished correctly
[2024-05-16 08:34:24] 2024-05-16 06:33:56,605 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-16 08:34:24] 2024-05-16 06:33:58,507 | INFO     | job 6206225019 has state=finished
[2024-05-16 08:34:24] 2024-05-16 06:33:58,508 | INFO     | preparing for final server update for job 6206225019 in state='finished'
[2024-05-16 08:34:24] 2024-05-16 06:33:58,508 | INFO     | this job has now completed (state=finished)
[2024-05-16 08:34:24] 2024-05-16 06:33:58,508 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 08:34:24] 2024-05-16 06:33:58,508 | INFO     | job 6206225019 has finished - writing final server update
[2024-05-16 08:34:24] 2024-05-16 06:33:58,509 | INFO     | total number of processed events: 400 (read)
[2024-05-16 08:34:24] 2024-05-16 06:33:58,511 | INFO     | executing command: lscpu
[2024-05-16 08:34:24] 2024-05-16 06:33:58,543 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-16 08:34:24] 2024-05-16 06:33:58,544 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 08:34:24] 2024-05-16 06:33:58,578 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 08:34:24] 2024-05-16 06:34:02,763 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-16 08:34:24] 2024-05-16 06:34:02,764 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6206225019/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 08:34:24] 2024-05-16 06:34:02,769 | INFO     | extracted standard info from prmon json
[2024-05-16 08:34:24] 2024-05-16 06:34:02,769 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 08:34:24] 2024-05-16 06:34:02,770 | WARNING  | GPU info not found in prmon json
[2024-05-16 08:34:24] 2024-05-16 06:34:02,770 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 08:34:24] 2024-05-16 06:34:02,770 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 08:34:24] 2024-05-16 06:34:02,772 | INFO     | fitting pss+swap vs Time
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | model: linear, x: [1715837561.0, 1715837622.0, 1715837683.0, 1715837744.0, 1715837805.0, 1715837866.0, 1715837927.0, 1715837988.0, 1715838049.0, 1715838110.0, 1715
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | sum of square deviations: 63666310.0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | sum of deviations: 10446825534.999998
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | mean x: 1715839330.0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | mean y: 2736549.525423729
[2024-05-16 08:34:24] 2024-05-16 06:34:02,773 | INFO     | -- intersect: -281544507614.63745
[2024-05-16 08:34:24] 2024-05-16 06:34:02,774 | INFO     | intersect: -281544507614.63745
[2024-05-16 08:34:24] 2024-05-16 06:34:02,774 | INFO     | chi2: 1.8635397376345366
[2024-05-16 08:34:24] 2024-05-16 06:34:02,774 | INFO     | -- intersect: -281544507614.63745
[2024-05-16 08:34:24] 2024-05-16 06:34:02,774 | INFO     | current memory leak: 164.09 B/s (using 59 data points, chi2=1.86)
[2024-05-16 08:34:24] 2024-05-16 06:34:02,774 | INFO     | ..............................
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . Timing measurements:
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . get job = 0 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . initial setup = 1 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . payload setup = 5 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . stage-in = 0 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . payload execution = 3981 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . stage-out = 0 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,775 | INFO     | . log creation = 0 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,776 | INFO     | ..............................
[2024-05-16 08:34:24] 2024-05-16 06:34:02,917 | WARNING  | process 361711 is no longer using CPU - aborting
[2024-05-16 08:34:24] 2024-05-16 06:34:02,917 | INFO     | 
[2024-05-16 08:34:24] 2024-05-16 06:34:02,917 | INFO     | aborting job monitoring since job object (job id=6206225019) has expired
[2024-05-16 08:34:24] 2024-05-16 06:34:02,917 | INFO     | job summary report
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | --------------------------------------------------
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | PanDA job id: 6206225019
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | task id: 38776104
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | errors: (none)
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | pilot state: finished 
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | transexitcode: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,918 | INFO     | exeerrorcode: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | exeerrordiag: 
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | exitcode: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | exitmsg: OK
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | cpuconsumptiontime: 38269 s
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | nevents: 400
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | neventsw: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | pid: 361711
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | pgrp: 361711
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | corecount: 12
[2024-05-16 08:34:24] 2024-05-16 06:34:02,919 | INFO     | event service: False
[2024-05-16 08:34:24] 2024-05-16 06:34:02,920 | INFO     | sizes: {0: 2392090, 1: 2392232, 5: 2392438, 11: 2392494, 3990: 2418310, 3991: 2427456, 3997: 2427570}
[2024-05-16 08:34:24] 2024-05-16 06:34:02,920 | INFO     | --------------------------------------------------
[2024-05-16 08:34:24] 2024-05-16 06:34:02,920 | INFO     | 
[2024-05-16 08:34:24] 2024-05-16 06:34:02,920 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2024-05-16 08:34:24] 2024-05-16 06:34:02,938 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,938 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,938 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,938 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,939 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 08:34:24] 2024-05-16 06:34:02,940 | INFO     | job 6206225019 has completed (purged errors)
[2024-05-16 08:34:24] 2024-05-16 06:34:02,941 | INFO     | overall cleanup function is called
[2024-05-16 08:34:24] 2024-05-16 06:34:03,945 | INFO     | --- collectZombieJob: --- 10, [361711]
[2024-05-16 08:34:24] 2024-05-16 06:34:03,945 | INFO     | zombie collector waiting for pid 361711
[2024-05-16 08:34:24] 2024-05-16 06:34:03,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 08:34:24] 2024-05-16 06:34:04,950 | INFO     | collected zombie processes
[2024-05-16 08:34:24] 2024-05-16 06:34:04,950 | INFO     | will now attempt to kill all subprocesses of pid=361711
[2024-05-16 08:34:24] 2024-05-16 06:34:05,023 | INFO     | process IDs to be killed: [361711] (in reverse order)
[2024-05-16 08:34:24] 2024-05-16 06:34:05,091 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 08:34:24] 2024-05-16 06:34:05,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 08:34:24] 2024-05-16 06:34:05,095 | INFO     | did not find any defunct processes belonging to 361711
[2024-05-16 08:34:24] 2024-05-16 06:34:05,099 | INFO     | did not find any defunct processes belonging to 361711
[2024-05-16 08:34:24] 2024-05-16 06:34:05,099 | INFO     | ready for new job
[2024-05-16 08:34:24] 2024-05-16 06:34:05,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 08:34:24] 2024-05-16 06:34:05,100 | INFO     | *************************************
[2024-05-16 08:34:24] 2024-05-16 06:34:05,100 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 08:34:24] 2024-05-16 06:34:05,100 | INFO     | *************************************
[2024-05-16 08:34:24] 2024-05-16 06:34:05,100 | INFO     | 
[2024-05-16 08:34:24] 2024-05-16 06:34:05,101 | INFO     | architecture information:
[2024-05-16 08:34:24] 2024-05-16 06:34:05,101 | INFO     | executing command: cat /etc/os-release
[2024-05-16 08:34:24] 2024-05-16 06:34:05,114 | INFO     | cat /etc/os-release:
[2024-05-16 08:34:24] NAME="CentOS Linux"
[2024-05-16 08:34:24] VERSION="7 (Core)"
[2024-05-16 08:34:24] ID="centos"
[2024-05-16 08:34:24] ID_LIKE="rhel fedora"
[2024-05-16 08:34:24] VERSION_ID="7"
[2024-05-16 08:34:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 08:34:24] ANSI_COLOR="0;31"
[2024-05-16 08:34:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 08:34:24] HOME_URL="https://www.centos.org/"
[2024-05-16 08:34:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 08:34:24] 
[2024-05-16 08:34:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 08:34:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 08:34:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 08:34:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 08:34:24] 
[2024-05-16 08:34:24] 2024-05-16 06:34:05,114 | INFO     | *************************************
[2024-05-16 08:34:24] 2024-05-16 06:34:05,617 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2024-05-16 08:34:24] 2024-05-16 06:34:05,632 | INFO     | sufficient remaining disk space (708605640704 B)
[2024-05-16 08:34:24] 2024-05-16 06:34:05,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 08:34:24] 2024-05-16 06:34:05,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 08:34:24] 2024-05-16 06:34:05,632 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 08:34:24] 2024-05-16 06:34:05,632 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 08:34:24] 2024-05-16 06:34:05,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 08:34:24] 2024-05-16 06:34:05,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 08:34:24] 2024-05-16 06:34:05,977 | INFO     | all data control threads have been joined
[2024-05-16 08:34:24] 2024-05-16 06:34:06,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:34:24] 2024-05-16 06:34:06,426 | INFO     | aborting loop
[2024-05-16 08:34:24] 2024-05-16 06:34:06,637 | INFO     | [job] retrieve thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:06,650 | INFO     | [job] validate thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:06,934 | INFO     | all payload control threads have been joined
[2024-05-16 08:34:24] 2024-05-16 06:34:06,956 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:06,979 | INFO     | [data] copytool_in thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:06,983 | INFO     | [data] control thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:07,007 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:07,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 08:34:24] 2024-05-16 06:34:07,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 08:34:24] 2024-05-16 06:34:07,256 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:07,273 | INFO     | all job control threads have been joined
[2024-05-16 08:34:24] 2024-05-16 06:34:07,386 | INFO     | [payload] failed_post thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:07,431 | INFO     | [job] job monitor thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:07,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:34:24] 2024-05-16 06:34:07,938 | INFO     | [payload] control thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:08,051 | INFO     | [payload] validate_post thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:08,274 | INFO     | [job] control thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:08,933 | INFO     | [job] queue monitor thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:09,122 | INFO     | [data] copytool_out thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:11,220 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:16,649 | INFO     | job.realtimelogging is not enabled
[2024-05-16 08:34:24] 2024-05-16 06:34:17,655 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 08:34:24] 2024-05-16 06:34:18,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140259342550848)>', '<ExcThread(monitor, started 140258784040704)>']
[2024-05-16 08:34:24] 2024-05-16 06:34:19,690 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 08:34:24] 2024-05-16 06:34:19,690 | INFO     | [monitor] control thread has ended
[2024-05-16 08:34:24] 2024-05-16 06:34:23,935 | INFO     | all workflow threads have been joined
[2024-05-16 08:34:24] 2024-05-16 06:34:23,935 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 08:34:24] 2024-05-16 06:34:23,935 | INFO     | traces error code: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:23,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 08:34:24] 2024-05-16 06:34:24,016 [wrapper] ==== pilot stdout END ====
[2024-05-16 08:34:24] 2024-05-16 06:34:24,019 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 08:34:24] 2024-05-16 06:34:24,022 [wrapper] pilotpid: 354909
[2024-05-16 08:34:24] 2024-05-16 06:34:24,025 [wrapper] Pilot exit status: 0
[2024-05-16 08:34:24] 2024-05-16 06:34:24,035 [wrapper] pandaids: 6206225019
[2024-05-16 08:34:24] 2024-05-16 06:34:24,092 [wrapper] cleanup: SIGTERM to supervisor_pilot  412953 354910
[2024-05-16 08:34:24] 2024-05-16 06:34:24,096 [wrapper] Test setup, not cleaning
[2024-05-16 08:34:24] 2024-05-16 06:34:24,099 [wrapper] ==== wrapper stdout END ====
[2024-05-16 08:34:24] 2024-05-16 06:34:24,102 [wrapper] ==== wrapper stderr END ====
[2024-05-16 08:34:24] 2024-05-16 06:34:24,108 [wrapper] apfmon messages muted
[2024-05-16 08:34:24]  *** Error codes and diagnostics ***
[2024-05-16 08:34:24]     "exeErrorCode": 0,
[2024-05-16 08:34:24]     "exeErrorDiag": "",
[2024-05-16 08:34:24]     "pilotErrorCode": 0,
[2024-05-16 08:34:24]     "pilotErrorDiag": "",
[2024-05-16 08:34:24]  *** Listing of results directory ***
[2024-05-16 08:34:24] total 818780
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc    467845 May 14 21:32 pilot3.tar.gz
[2024-05-16 08:34:24] -rwx------ 1 boinc boinc     32251 May 14 21:35 runpilot2-wrapper.sh
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc      5633 May 14 21:35 queuedata.json
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc       100 May 16 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 08:34:24] -rwxr-xr-x 1 boinc boinc      7986 May 16 07:26 run_atlas
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc       105 May 16 07:26 job.xml
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc     17537 May 16 07:26 start_atlas.sh
[2024-05-16 08:34:24] drwxrwx--x 2 boinc boinc      4096 May 16 07:26 shared
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc    480004 May 16 07:26 input.tar.gz
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc      6528 May 16 07:26 init_data.xml
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc 600236972 May 16 07:26 EVNT.38776100._000132.pool.root.1
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc         0 May 16 07:26 boinc_lockfile
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc      2642 May 16 07:26 pandaJob.out
[2024-05-16 08:34:24] -rw------- 1 boinc boinc       424 May 16 07:26 setup.sh.local
[2024-05-16 08:34:24] -rw------- 1 boinc boinc   1010627 May 16 07:27 agis_schedconf.cvmfs.json
[2024-05-16 08:34:24] -rw------- 1 boinc boinc         0 May 16 07:27 agis_ddmendpoints.agis.ALL.json
[2024-05-16 08:34:24] -rw------- 1 boinc boinc   1324701 May 16 07:27 cric_ddmendpoints.json
[2024-05-16 08:34:24] drwx------ 4 boinc boinc      4096 May 16 07:27 pilot3
[2024-05-16 08:34:24] -rw------- 1 boinc boinc        95 May 16 08:33 pilot_heartbeat.json
[2024-05-16 08:34:24] -rw------- 1 boinc boinc 233127206 May 16 08:33 HITS.38776104._003187.pool.root.1
[2024-05-16 08:34:24] -rw------- 1 boinc boinc      1044 May 16 08:33 memory_monitor_summary.json
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc      8192 May 16 08:33 boinc_mmap_file
[2024-05-16 08:34:24] -rw------- 1 boinc boinc    355508 May 16 08:33 log.38776104._003187.job.log.tgz.1
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc        27 May 16 08:33 wrapper_checkpoint.txt
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc       530 May 16 08:33 boinc_task_state.xml
[2024-05-16 08:34:24] -rw------- 1 boinc boinc      7715 May 16 08:34 heartbeat.json
[2024-05-16 08:34:24] -rw------- 1 boinc boinc      4408 May 16 08:34 pilotlog.txt
[2024-05-16 08:34:24] -rw------- 1 boinc boinc    414773 May 16 08:34 log.38776104._003187.job.log.1
[2024-05-16 08:34:24] -rw------- 1 boinc boinc       357 May 16 08:34 output.list
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc       620 May 16 08:34 runtime_log
[2024-05-16 08:34:24] -rw------- 1 boinc boinc    788480 May 16 08:34 result.tar.gz
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc     11064 May 16 08:34 runtime_log.err
[2024-05-16 08:34:24] -rw------- 1 boinc boinc       659 May 16 08:34 5vPNDmn6CR5n7Olcko1bjSoqABFKDmABFKDmOtvXDmnOYKDmbKpJ8m.diag
[2024-05-16 08:34:24] -rw-r--r-- 1 boinc boinc     21059 May 16 08:34 stderr.txt
[2024-05-16 08:34:24] HITS file was successfully produced:
[2024-05-16 08:34:24] -rw------- 1 boinc boinc 233127206 May 16 08:33 shared/HITS.pool.root.1
[2024-05-16 08:34:24]  *** Contents of shared directory: ***
[2024-05-16 08:34:24] total 815108
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc     17537 May 16 07:26 start_atlas.sh
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc    480004 May 16 07:26 input.tar.gz
[2024-05-16 08:34:24] -rw-r--r-- 2 boinc boinc 600236972 May 16 07:26 ATLAS.root_0
[2024-05-16 08:34:24] -rw------- 1 boinc boinc 233127206 May 16 08:33 HITS.pool.root.1
[2024-05-16 08:34:24] -rw------- 1 boinc boinc    788480 May 16 08:34 result.tar.gz
08:34:25 (350505): run_atlas exited; CPU time 38048.206428
08:34:25 (350505): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN