Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:01:32 (267684): wrapper (7.7.26015): starting
06:01:32 (267684): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 06:01:32] Arguments: --nthreads 12
[2024-05-16 06:01:32] Threads: 12
[2024-05-16 06:01:32] Checking for CVMFS
[2024-05-16 06:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 06:01:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 06:01:32] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 06:01:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 06:01:32] 2.11.3.0 11199 9733 94480 132784 0 56 41182998 46080001 911 130560 0 10524865 99.931 1558487 33185 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-16 06:01:32] CVMFS is ok
[2024-05-16 06:01:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 06:01:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 06:01:32] Further information can be found at the LHC@home message board.
[2024-05-16 06:01:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 06:01:32] Checking for apptainer binary...
[2024-05-16 06:01:32] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 06:01:32] Running /usr/bin/apptainer --version
[2024-05-16 06:01:32] apptainer version 1.3.1-1.el7
[2024-05-16 06:01:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 06:01:32] minis01.farm.particle.cz
[2024-05-16 06:01:32] apptainer works
[2024-05-16 06:01:32] Set ATHENA_PROC_NUMBER=12
[2024-05-16 06:01:32] Set ATHENA_CORE_NUMBER=12
[2024-05-16 06:01:33] Starting ATLAS job with PandaID=6206212637
[2024-05-16 06:01:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 08:55:16]  *** The last 200 lines of the pilot log: ***
[2024-05-16 08:55:16] 2024-05-16 06:55:02,514 | INFO     | -- intersect: -8002287639.503751
[2024-05-16 08:55:16] 2024-05-16 06:55:02,514 | INFO     | intersect: -8002287639.503751
[2024-05-16 08:55:16] 2024-05-16 06:55:02,514 | INFO     | chi2: 0.16953442311065584
[2024-05-16 08:55:16] 2024-05-16 06:55:02,514 | INFO     | current chi2=0.16953442311065584 (change=89.65410147164137 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,515 | INFO     | model: linear, x: [1715833045.0, 1715833106.0, 1715833167.0, 1715833228.0, 1715833289.0, 1715833350.0, 1715833411.0, 1715833472.0, 1715833533.0, 1715833594.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,515 | INFO     | sum of square deviations: 1154663510.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,515 | INFO     | sum of deviations: -2657966725.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,515 | INFO     | mean x: 1715837742.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | mean y: 2783456.5032258066
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | -- intersect: 3952539887.0456047
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | intersect: 3952539887.0456047
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | chi2: 0.05018229893210299
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | current chi2=0.05018229893210299 (change=70.39993529847989 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | model: linear, x: [1715833350.0, 1715833411.0, 1715833472.0, 1715833533.0, 1715833594.0, 1715833655.0, 1715833716.0, 1715833777.0, 1715833838.0, 1715833899.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,516 | INFO     | sum of square deviations: 1046484737.5
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | sum of deviations: 1245596758.9999971
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | mean x: 1715837894.5
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | mean y: 2777931.8933333335
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | -- intersect: -2039528127.404143
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | intersect: -2039528127.404143
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | chi2: 0.03234600108919012
[2024-05-16 08:55:16] 2024-05-16 06:55:02,517 | INFO     | current chi2=0.03234600108919012 (change=35.543006642731754 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,518 | INFO     | model: linear, x: [1715833655.0, 1715833716.0, 1715833777.0, 1715833838.0, 1715833899.0, 1715833960.0, 1715834021.0, 1715834082.0, 1715834143.0, 1715834204.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,518 | INFO     | sum of square deviations: 945282840.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,518 | INFO     | sum of deviations: 5255814046.000001
[2024-05-16 08:55:16] 2024-05-16 06:55:02,518 | INFO     | mean x: 1715838047.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,518 | INFO     | mean y: 2771936.268965517
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | -- intersect: -9537362853.529833
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | intersect: -9537362853.529833
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | chi2: 0.0004180837656411073
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | current chi2=0.0004180837656411073 (change=98.70746382377132 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | model: linear, x: [1715833960.0, 1715834021.0, 1715834082.0, 1715834143.0, 1715834204.0, 1715834265.0, 1715834326.0, 1715834387.0, 1715834448.0, 1715834509.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,519 | INFO     | sum of square deviations: 850825255.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | sum of deviations: 4458569788.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | mean x: 1715838199.5
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | mean y: 2773222.7
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | -- intersect: -8988713939.240223
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | intersect: -8988713939.240223
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | chi2: 0.00030229595837770457
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | current chi2=0.00030229595837770457 (change=27.694882408516584 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,520 | INFO     | model: linear, x: [1715834265.0, 1715834326.0, 1715834387.0, 1715834448.0, 1715834509.0, 1715834570.0, 1715834631.0, 1715834692.0, 1715834753.0, 1715834814.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | sum of square deviations: 762879420.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | sum of deviations: 3848955613.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | mean x: 1715838352.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | mean y: 2774280.162962963
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | -- intersect: -8654145126.485954
[2024-05-16 08:55:16] 2024-05-16 06:55:02,521 | INFO     | intersect: -8654145126.485954
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | chi2: 0.00026512438205620974
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | current chi2=0.00026512438205620974 (change=12.296418556496443 %)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | left removable region: 70
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | model: linear, x: [1715836400.0, 1715836461.0, 1715836522.0, 1715836583.0, 1715836644.0, 1715836705.0, 1715836766.0, 1715836827.0, 1715836888.0, 1715836949.0, 1715
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | sum of square deviations: 257521107.5
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | sum of deviations: 1509464642.0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | mean x: 1715839236.5
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | mean y: 2778791.212765957
[2024-05-16 08:55:16] 2024-05-16 06:55:02,522 | INFO     | -- intersect: -10054644011.898726
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | intersect: -10054644011.898726
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | chi2: 9.055750753808778e-05
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | -- intersect: -10054644011.898726
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | current memory leak: 5.86 B/s (using 94 data points, chi2=0.00)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | ..............................
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | . Timing measurements:
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | . get job = 0 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | . initial setup = 1 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,523 | INFO     | . payload setup = 6 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,524 | INFO     | . stage-in = 0 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,524 | INFO     | . payload execution = 10363 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,524 | INFO     | . stage-out = 0 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,524 | INFO     | . log creation = 0 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,524 | INFO     | ..............................
[2024-05-16 08:55:16] 2024-05-16 06:55:02,657 | INFO     | 
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | job summary report
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | --------------------------------------------------
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | PanDA job id: 6206212637
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | task id: 38921001
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | errors: (none)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 08:55:16] 2024-05-16 06:55:02,658 | INFO     | pilot state: finished 
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | transexitcode: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | exeerrorcode: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | exeerrordiag: 
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | exitcode: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | exitmsg: OK
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | cpuconsumptiontime: 112737 s
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | nevents: 400
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | neventsw: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | pid: 278840
[2024-05-16 08:55:16] 2024-05-16 06:55:02,659 | INFO     | pgrp: 278840
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | corecount: 12
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | event service: False
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | sizes: {0: 2392038, 1: 2392237, 5: 2392443, 11: 2392499, 10372: 2421359, 10374: 2430321, 10377: 2430505, 10383: 2430675}
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | --------------------------------------------------
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | 
[2024-05-16 08:55:16] 2024-05-16 06:55:02,660 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-16 08:55:16] 2024-05-16 06:55:02,677 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,680 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,680 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 08:55:16] 2024-05-16 06:55:02,680 | INFO     | job 6206212637 has completed (purged errors)
[2024-05-16 08:55:16] 2024-05-16 06:55:02,680 | INFO     | overall cleanup function is called
[2024-05-16 08:55:16] 2024-05-16 06:55:03,688 | INFO     | --- collectZombieJob: --- 10, [278840]
[2024-05-16 08:55:16] 2024-05-16 06:55:03,688 | INFO     | zombie collector waiting for pid 278840
[2024-05-16 08:55:16] 2024-05-16 06:55:03,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 08:55:16] 2024-05-16 06:55:04,694 | INFO     | collected zombie processes
[2024-05-16 08:55:16] 2024-05-16 06:55:04,694 | INFO     | will now attempt to kill all subprocesses of pid=278840
[2024-05-16 08:55:16] 2024-05-16 06:55:04,805 | INFO     | process IDs to be killed: [278840] (in reverse order)
[2024-05-16 08:55:16] 2024-05-16 06:55:04,874 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 08:55:16] 2024-05-16 06:55:04,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 08:55:16] 2024-05-16 06:55:04,878 | INFO     | did not find any defunct processes belonging to 278840
[2024-05-16 08:55:16] 2024-05-16 06:55:04,882 | INFO     | did not find any defunct processes belonging to 278840
[2024-05-16 08:55:16] 2024-05-16 06:55:04,882 | INFO     | ready for new job
[2024-05-16 08:55:16] 2024-05-16 06:55:04,883 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 08:55:16] 2024-05-16 06:55:04,884 | INFO     | *************************************
[2024-05-16 08:55:16] 2024-05-16 06:55:04,884 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 08:55:16] 2024-05-16 06:55:04,884 | INFO     | *************************************
[2024-05-16 08:55:16] 2024-05-16 06:55:04,884 | INFO     | 
[2024-05-16 08:55:16] 2024-05-16 06:55:04,885 | INFO     | architecture information:
[2024-05-16 08:55:16] 2024-05-16 06:55:04,885 | INFO     | executing command: cat /etc/os-release
[2024-05-16 08:55:16] 2024-05-16 06:55:04,896 | INFO     | cat /etc/os-release:
[2024-05-16 08:55:16] NAME="CentOS Linux"
[2024-05-16 08:55:16] VERSION="7 (Core)"
[2024-05-16 08:55:16] ID="centos"
[2024-05-16 08:55:16] ID_LIKE="rhel fedora"
[2024-05-16 08:55:16] VERSION_ID="7"
[2024-05-16 08:55:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 08:55:16] ANSI_COLOR="0;31"
[2024-05-16 08:55:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 08:55:16] HOME_URL="https://www.centos.org/"
[2024-05-16 08:55:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 08:55:16] 
[2024-05-16 08:55:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 08:55:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 08:55:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 08:55:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 08:55:16] 
[2024-05-16 08:55:16] 2024-05-16 06:55:04,897 | INFO     | *************************************
[2024-05-16 08:55:16] 2024-05-16 06:55:05,399 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-16 08:55:16] 2024-05-16 06:55:05,411 | INFO     | sufficient remaining disk space (708732518400 B)
[2024-05-16 08:55:16] 2024-05-16 06:55:05,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 08:55:16] 2024-05-16 06:55:05,412 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 08:55:16] 2024-05-16 06:55:05,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 08:55:16] 2024-05-16 06:55:05,412 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:55:16] 2024-05-16 06:55:05,412 | INFO     | aborting loop
[2024-05-16 08:55:16] 2024-05-16 06:55:05,874 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 08:55:16] 2024-05-16 06:55:05,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 08:55:16] 2024-05-16 06:55:05,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 08:55:16] 2024-05-16 06:55:05,952 | INFO     | all payload control threads have been joined
[2024-05-16 08:55:16] 2024-05-16 06:55:05,980 | INFO     | all data control threads have been joined
[2024-05-16 08:55:16] 2024-05-16 06:55:06,417 | INFO     | [job] retrieve thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:06,417 | INFO     | [job] job monitor thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:06,561 | INFO     | [payload] failed_post thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:06,844 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:06,898 | INFO     | all job control threads have been joined
[2024-05-16 08:55:16] 2024-05-16 06:55:06,958 | INFO     | [payload] control thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:06,985 | INFO     | [data] control thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 08:55:16] 2024-05-16 06:55:07,297 | INFO     | [data] copytool_in thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,335 | INFO     | [payload] validate_post thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,379 | INFO     | [job] validate thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,417 | INFO     | [data] copytool_out thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,668 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:55:16] 2024-05-16 06:55:07,837 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,870 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,903 | INFO     | [job] control thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:07,904 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:08,673 | INFO     | [job] queue monitor thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:11,227 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 08:55:16] 2024-05-16 06:55:11,733 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456928782144)>', '<ExcThread(monitor, started 140456226711296)>']
[2024-05-16 08:55:16] 2024-05-16 06:55:11,905 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 08:55:16] 2024-05-16 06:55:11,905 | INFO     | [monitor] control thread has ended
[2024-05-16 08:55:16] 2024-05-16 06:55:16,735 | INFO     | all workflow threads have been joined
[2024-05-16 08:55:16] 2024-05-16 06:55:16,736 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 08:55:16] 2024-05-16 06:55:16,736 | INFO     | traces error code: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:16,736 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 08:55:16] 2024-05-16 06:55:16,806 [wrapper] ==== pilot stdout END ====
[2024-05-16 08:55:16] 2024-05-16 06:55:16,807 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 08:55:16] 2024-05-16 06:55:16,810 [wrapper] pilotpid: 272079
[2024-05-16 08:55:16] 2024-05-16 06:55:16,812 [wrapper] Pilot exit status: 0
[2024-05-16 08:55:16] 2024-05-16 06:55:16,818 [wrapper] pandaids: 6206212637
[2024-05-16 08:55:16] 2024-05-16 06:55:16,851 [wrapper] cleanup: SIGTERM to supervisor_pilot  449932 272080
[2024-05-16 08:55:16] 2024-05-16 06:55:16,854 [wrapper] Test setup, not cleaning
[2024-05-16 08:55:16] 2024-05-16 06:55:16,856 [wrapper] ==== wrapper stdout END ====
[2024-05-16 08:55:16] 2024-05-16 06:55:16,858 [wrapper] ==== wrapper stderr END ====
[2024-05-16 08:55:16] 2024-05-16 06:55:16,863 [wrapper] apfmon messages muted
[2024-05-16 08:55:16]  *** Error codes and diagnostics ***
[2024-05-16 08:55:16]     "exeErrorCode": 0,
[2024-05-16 08:55:16]     "exeErrorDiag": "",
[2024-05-16 08:55:16]     "pilotErrorCode": 0,
[2024-05-16 08:55:16]     "pilotErrorDiag": "",
[2024-05-16 08:55:16]  *** Listing of results directory ***
[2024-05-16 08:55:16] total 960548
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc    467845 May 14 20:28 pilot3.tar.gz
[2024-05-16 08:55:16] -rwx------ 1 boinc boinc     32251 May 14 20:29 runpilot2-wrapper.sh
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc      5633 May 14 20:29 queuedata.json
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc       100 May 16 06:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 08:55:16] -rwxr-xr-x 1 boinc boinc      7986 May 16 06:01 run_atlas
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc       105 May 16 06:01 job.xml
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc      6528 May 16 06:01 init_data.xml
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc 616148699 May 16 06:01 EVNT.38776190._000019.pool.root.1
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc     17537 May 16 06:01 start_atlas.sh
[2024-05-16 08:55:16] drwxrwx--x 2 boinc boinc      4096 May 16 06:01 shared
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc    479998 May 16 06:01 input.tar.gz
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc         0 May 16 06:01 boinc_lockfile
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc      2650 May 16 06:01 pandaJob.out
[2024-05-16 08:55:16] -rw------- 1 boinc boinc       424 May 16 06:01 setup.sh.local
[2024-05-16 08:55:16] -rw------- 1 boinc boinc   1011347 May 16 06:01 agis_schedconf.cvmfs.json
[2024-05-16 08:55:16] -rw------- 1 boinc boinc         0 May 16 06:01 agis_ddmendpoints.agis.ALL.json
[2024-05-16 08:55:16] -rw------- 1 boinc boinc   1324701 May 16 06:01 cric_ddmendpoints.json
[2024-05-16 08:55:16] drwx------ 4 boinc boinc      4096 May 16 06:01 pilot3
[2024-05-16 08:55:16] -rw------- 1 boinc boinc        95 May 16 08:54 pilot_heartbeat.json
[2024-05-16 08:55:16] -rw------- 1 boinc boinc 360900287 May 16 08:54 HITS.38921001._000410.pool.root.1
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc       533 May 16 08:54 boinc_task_state.xml
[2024-05-16 08:55:16] -rw------- 1 boinc boinc      1034 May 16 08:54 memory_monitor_summary.json
[2024-05-16 08:55:16] -rw------- 1 boinc boinc    424046 May 16 08:54 log.38921001._000410.job.log.tgz.1
[2024-05-16 08:55:16] -rw------- 1 boinc boinc      7721 May 16 08:55 heartbeat.json
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc      8192 May 16 08:55 boinc_mmap_file
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc        29 May 16 08:55 wrapper_checkpoint.txt
[2024-05-16 08:55:16] -rw------- 1 boinc boinc      4213 May 16 08:55 pilotlog.txt
[2024-05-16 08:55:16] -rw------- 1 boinc boinc   1087748 May 16 08:55 log.38921001._000410.job.log.1
[2024-05-16 08:55:16] -rw------- 1 boinc boinc       357 May 16 08:55 output.list
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc       620 May 16 08:55 runtime_log
[2024-05-16 08:55:16] -rw------- 1 boinc boinc   1536000 May 16 08:55 result.tar.gz
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc     11065 May 16 08:55 runtime_log.err
[2024-05-16 08:55:16] -rw------- 1 boinc boinc       664 May 16 08:55 ByDODmr4BR5nsSi4apGgGQJmABFKDmABFKDm4ySLDmqANKDmCRCAkn.diag
[2024-05-16 08:55:16] -rw-r--r-- 1 boinc boinc     21572 May 16 08:55 stderr.txt
[2024-05-16 08:55:16] HITS file was successfully produced:
[2024-05-16 08:55:16] -rw------- 1 boinc boinc 360900287 May 16 08:54 shared/HITS.pool.root.1
[2024-05-16 08:55:16]  *** Contents of shared directory: ***
[2024-05-16 08:55:16] total 956152
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc 616148699 May 16 06:01 ATLAS.root_0
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc     17537 May 16 06:01 start_atlas.sh
[2024-05-16 08:55:16] -rw-r--r-- 2 boinc boinc    479998 May 16 06:01 input.tar.gz
[2024-05-16 08:55:16] -rw------- 1 boinc boinc 360900287 May 16 08:54 HITS.pool.root.1
[2024-05-16 08:55:16] -rw------- 1 boinc boinc   1536000 May 16 08:55 result.tar.gz
08:55:18 (267684): run_atlas exited; CPU time 112008.253972
08:55:18 (267684): called boinc_finish(0)

</stderr_txt>
]]>

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