Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:09 (4001001): wrapper (7.7.26015): starting
22:57:09 (4001001): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 22:57:09] Arguments: --nthreads 4
[2024-05-19 22:57:09] Threads: 4
[2024-05-19 22:57:09] Checking for CVMFS
[2024-05-19 22:57:09] No cvmfs_config command found, will try listing directly
[2024-05-19 22:57:09] CVMFS is ok
[2024-05-19 22:57:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 22:57:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 22:57:09] Further information can be found at the LHC@home message board.
[2024-05-19 22:57:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 22:57:09] Checking for apptainer binary...
[2024-05-19 22:57:09] which: no apptainer in ((null))
[2024-05-19 22:57:09] apptainer is not installed, using version from CVMFS
[2024-05-19 22:57:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 22:57:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-19 22:57:09] apptainer works
[2024-05-19 22:57:09] Set ATHENA_PROC_NUMBER=4
[2024-05-19 22:57:09] Set ATHENA_CORE_NUMBER=4
[2024-05-19 22:57:09] Starting ATLAS job with PandaID=6206184125
[2024-05-19 22:57:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 00:51:19]  *** The last 200 lines of the pilot log: ***
[2024-05-20 00:51:19] 2024-05-19 22:51:02,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 00:51:19] 2024-05-19 22:51:02,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | fitting pss+swap vs Time
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | model: linear, x: [1716152263.0, 1716152324.0, 1716152385.0, 1716152446.0, 1716152507.0, 1716152568.0, 1716152629.0, 1716152690.0, 1716152751.0, 1716152812.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | sum of square deviations: 435610028.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | sum of deviations: 40841534594.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | mean x: 1716155648.5
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | mean y: 2203897.4464285714
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | -- intersect: -160899579306.9137
[2024-05-20 00:51:19] 2024-05-19 22:51:02,638 | INFO     | intersect: -160899579306.9137
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | chi2: 4.626014757516659
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | model: linear, x: [1716152263.0, 1716152324.0, 1716152385.0, 1716152446.0, 1716152507.0, 1716152568.0, 1716152629.0, 1716152690.0, 1716152751.0, 1716152812.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | sum of square deviations: 379832238.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | sum of deviations: 45573811016.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | mean x: 1716155496.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | mean y: 2216140.3644859814
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | -- intersect: -205909074224.55118
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | intersect: -205909074224.55118
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | chi2: 3.8251196785335098
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | current chi2=3.8251196785335098 (change=17.312851794988354 %)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,639 | INFO     | right removable region: 106
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | model: linear, x: [1716152568.0, 1716152629.0, 1716152690.0, 1716152751.0, 1716152812.0, 1716152873.0, 1716152934.0, 1716152995.0, 1716153056.0, 1716153117.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | sum of square deviations: 379832238.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | sum of deviations: 16399618138.999996
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | mean x: 1716155801.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | mean y: 2270391.523364486
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | -- intersect: -74094388574.61124
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | intersect: -74094388574.61124
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | chi2: 2.2568403578317353
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | current chi2=2.2568403578317353 (change=51.21415567979609 %)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | model: linear, x: [1716152873.0, 1716152934.0, 1716152995.0, 1716153056.0, 1716153117.0, 1716153178.0, 1716153239.0, 1716153300.0, 1716153361.0, 1716153422.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,640 | INFO     | sum of square deviations: 329031285.5
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | sum of deviations: -3099628623.9999995
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | mean x: 1716155953.5
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | mean y: 2328960.117647059
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | -- intersect: 16169320827.268263
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | intersect: 16169320827.268263
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | chi2: 0.8577033291400845
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | current chi2=0.8577033291400845 (change=61.99539209037697 %)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | model: linear, x: [1716153178.0, 1716153239.0, 1716153300.0, 1716153361.0, 1716153422.0, 1716153483.0, 1716153544.0, 1716153605.0, 1716153666.0, 1716153727.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | sum of square deviations: 282974608.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | sum of deviations: -4804948406.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,641 | INFO     | mean x: 1716156106.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | mean y: 2334402.525773196
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | -- intersect: 29142905015.037647
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | intersect: 29142905015.037647
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | chi2: 0.8231487782790856
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | current chi2=0.8231487782790856 (change=4.028729945078163 %)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | left removable region: 30
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | model: linear, x: [1716154093.0, 1716154154.0, 1716154215.0, 1716154276.0, 1716154337.0, 1716154398.0, 1716154459.0, 1716154520.0, 1716154581.0, 1716154642.0, 1716
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | sum of square deviations: 136095575.0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | sum of deviations: 318587597.5
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | mean x: 1716156380.5
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | mean y: 2359779.25
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | -- intersect: -4015009177.806766
[2024-05-20 00:51:19] 2024-05-19 22:51:02,642 | INFO     | intersect: -4015009177.806766
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | chi2: 8.009325835656419e-05
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | -- intersect: -4015009177.806766
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | current memory leak: 2.34 B/s (using 76 data points, chi2=0.00)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | ..............................
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . Timing measurements:
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . get job = 0 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . initial setup = 1 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . payload setup = 4 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . stage-in = 0 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . payload execution = 6795 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . stage-out = 0 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | . log creation = 0 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,643 | INFO     | ..............................
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | 
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | job summary report
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | --------------------------------------------------
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | PanDA job id: 6206184125
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | task id: 38776104
[2024-05-20 00:51:19] 2024-05-19 22:51:02,702 | INFO     | errors: (none)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | pilot state: finished 
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | transexitcode: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | exeerrorcode: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | exeerrordiag: 
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | exitcode: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | exitmsg: OK
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | cpuconsumptiontime: 24504 s
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | nevents: 400
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | neventsw: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,703 | INFO     | pid: 4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | pgrp: 4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | corecount: 4
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | event service: False
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | sizes: {0: 2391306, 1: 2392241, 5: 2392447, 12: 2392503, 6803: 2419606, 6804: 2428772, 6809: 2428886}
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | --------------------------------------------------
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | 
[2024-05-20 00:51:19] 2024-05-19 22:51:02,704 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2024-05-20 00:51:19] 2024-05-19 22:51:02,728 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,728 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,728 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,728 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | job 6206184125 has completed (purged errors)
[2024-05-20 00:51:19] 2024-05-19 22:51:02,730 | INFO     | overall cleanup function is called
[2024-05-20 00:51:19] 2024-05-19 22:51:03,737 | INFO     | --- collectZombieJob: --- 10, [4025349]
[2024-05-20 00:51:19] 2024-05-19 22:51:03,738 | INFO     | zombie collector waiting for pid 4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:03,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 00:51:19] 2024-05-19 22:51:04,742 | INFO     | collected zombie processes
[2024-05-20 00:51:19] 2024-05-19 22:51:04,743 | INFO     | will now attempt to kill all subprocesses of pid=4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:05,019 | INFO     | process IDs to be killed: [4025349] (in reverse order)
[2024-05-20 00:51:19] 2024-05-19 22:51:05,197 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 00:51:19] 2024-05-19 22:51:05,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 00:51:19] 2024-05-19 22:51:05,213 | INFO     | did not find any defunct processes belonging to 4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:05,223 | INFO     | did not find any defunct processes belonging to 4025349
[2024-05-20 00:51:19] 2024-05-19 22:51:05,223 | INFO     | ready for new job
[2024-05-20 00:51:19] 2024-05-19 22:51:05,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 00:51:19] 2024-05-19 22:51:05,224 | INFO     | *************************************
[2024-05-20 00:51:19] 2024-05-19 22:51:05,224 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 00:51:19] 2024-05-19 22:51:05,224 | INFO     | *************************************
[2024-05-20 00:51:19] 2024-05-19 22:51:05,224 | INFO     | 
[2024-05-20 00:51:19] 2024-05-19 22:51:05,229 | INFO     | architecture information:
[2024-05-20 00:51:19] 2024-05-19 22:51:05,229 | INFO     | executing command: cat /etc/os-release
[2024-05-20 00:51:19] 2024-05-19 22:51:05,248 | INFO     | cat /etc/os-release:
[2024-05-20 00:51:19] NAME="CentOS Linux"
[2024-05-20 00:51:19] VERSION="7 (Core)"
[2024-05-20 00:51:19] ID="centos"
[2024-05-20 00:51:19] ID_LIKE="rhel fedora"
[2024-05-20 00:51:19] VERSION_ID="7"
[2024-05-20 00:51:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 00:51:19] ANSI_COLOR="0;31"
[2024-05-20 00:51:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 00:51:19] HOME_URL="https://www.centos.org/"
[2024-05-20 00:51:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 00:51:19] 
[2024-05-20 00:51:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 00:51:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 00:51:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 00:51:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 00:51:19] 
[2024-05-20 00:51:19] 2024-05-19 22:51:05,249 | INFO     | *************************************
[2024-05-20 00:51:19] 2024-05-19 22:51:05,752 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2024-05-20 00:51:19] 2024-05-19 22:51:05,779 | INFO     | sufficient remaining disk space (3002430652416 B)
[2024-05-20 00:51:19] 2024-05-19 22:51:05,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 00:51:19] 2024-05-19 22:51:05,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 00:51:19] 2024-05-19 22:51:05,780 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 00:51:19] 2024-05-19 22:51:05,780 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 00:51:19] 2024-05-19 22:51:05,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 00:51:19] 2024-05-19 22:51:05,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 00:51:19] 2024-05-19 22:51:05,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 00:51:19] 2024-05-19 22:51:05,781 | INFO     | aborting loop
[2024-05-20 00:51:19] 2024-05-19 22:51:05,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 00:51:19] 2024-05-19 22:51:06,286 | INFO     | all data control threads have been joined
[2024-05-20 00:51:19] 2024-05-19 22:51:06,372 | INFO     | all payload control threads have been joined
[2024-05-20 00:51:19] 2024-05-19 22:51:06,785 | INFO     | [job] retrieve thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:06,786 | INFO     | [job] job monitor thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:06,886 | INFO     | all job control threads have been joined
[2024-05-20 00:51:19] 2024-05-19 22:51:06,904 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,037 | INFO     | [payload] failed_post thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,291 | INFO     | [data] control thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,329 | INFO     | [job] validate thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,360 | INFO     | [data] copytool_in thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,375 | INFO     | [payload] control thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,538 | INFO     | [payload] validate_post thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,601 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,650 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 00:51:19] 2024-05-19 22:51:07,852 | INFO     | [data] copytool_out thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,871 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:07,891 | INFO     | [job] control thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:08,718 | INFO     | [job] queue monitor thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:09,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 00:51:19] 2024-05-19 22:51:13,067 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 00:51:19] 2024-05-19 22:51:13,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47832398316608)>', '<ExcThread(monitor, started 47832580073216)>']
[2024-05-20 00:51:19] 2024-05-19 22:51:13,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 00:51:19] 2024-05-19 22:51:13,821 | INFO     | [monitor] control thread has ended
[2024-05-20 00:51:19] 2024-05-19 22:51:18,327 | INFO     | all workflow threads have been joined
[2024-05-20 00:51:19] 2024-05-19 22:51:18,328 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 00:51:19] 2024-05-19 22:51:18,328 | INFO     | traces error code: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:18,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 00:51:19] 2024-05-19 22:51:18,401 [wrapper] ==== pilot stdout END ====
[2024-05-20 00:51:19] 2024-05-19 22:51:18,409 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 00:51:19] 2024-05-19 22:51:18,411 [wrapper] pilotpid: 4007338
[2024-05-20 00:51:19] 2024-05-19 22:51:18,413 [wrapper] Pilot exit status: 0
[2024-05-20 00:51:19] 2024-05-19 22:51:18,421 [wrapper] pandaids: 6206184125
[2024-05-20 00:51:19] 2024-05-19 22:51:18,542 [wrapper] cleanup: SIGTERM to supervisor_pilot  365852 4007339
[2024-05-20 00:51:19] 2024-05-19 22:51:18,544 [wrapper] Test setup, not cleaning
[2024-05-20 00:51:19] 2024-05-19 22:51:18,547 [wrapper] ==== wrapper stdout END ====
[2024-05-20 00:51:19] 2024-05-19 22:51:18,549 [wrapper] ==== wrapper stderr END ====
[2024-05-20 00:51:19] 2024-05-19 22:51:18,554 [wrapper] apfmon messages muted
[2024-05-20 00:51:19]  *** Error codes and diagnostics ***
[2024-05-20 00:51:19]     "exeErrorCode": 0,
[2024-05-20 00:51:19]     "exeErrorDiag": "",
[2024-05-20 00:51:19]     "pilotErrorCode": 0,
[2024-05-20 00:51:19]     "pilotErrorDiag": "",
[2024-05-20 00:51:19]  *** Listing of results directory ***
[2024-05-20 00:51:19] total 819760
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc    467845 May 14 18:09 pilot3.tar.gz
[2024-05-20 00:51:19] -rwx------ 1 boinc boinc     32251 May 14 18:16 runpilot2-wrapper.sh
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc      5633 May 14 18:16 queuedata.json
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc       100 May 19 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 00:51:19] -rwxr-xr-x 1 boinc boinc      7986 May 19 22:57 run_atlas
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc       105 May 19 22:57 job.xml
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc      6644 May 19 22:57 init_data.xml
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc 602309481 May 19 22:57 EVNT.38776100._000112.pool.root.1
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc     17537 May 19 22:57 start_atlas.sh
[2024-05-20 00:51:19] drwxrwx--x 2 boinc boinc      4096 May 19 22:57 shared
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc    480005 May 19 22:57 input.tar.gz
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc         0 May 19 22:57 boinc_lockfile
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc      2641 May 19 22:57 pandaJob.out
[2024-05-20 00:51:19] -rw------- 1 boinc boinc       424 May 19 22:57 setup.sh.local
[2024-05-20 00:51:19] -rw------- 1 boinc boinc   1013701 May 19 22:57 agis_schedconf.cvmfs.json
[2024-05-20 00:51:19] -rw------- 1 boinc boinc         0 May 19 22:57 agis_ddmendpoints.agis.ALL.json
[2024-05-20 00:51:19] -rw------- 1 boinc boinc   1324701 May 19 22:57 cric_ddmendpoints.json
[2024-05-20 00:51:19] drwx------ 4 boinc boinc      4096 May 19 22:57 pilot3
[2024-05-20 00:51:19] -rw------- 1 boinc boinc 231663024 May 20 00:50 HITS.38776104._002692.pool.root.1
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc       530 May 20 00:50 boinc_task_state.xml
[2024-05-20 00:51:19] -rw------- 1 boinc boinc        95 May 20 00:50 pilot_heartbeat.json
[2024-05-20 00:51:19] -rw------- 1 boinc boinc      1055 May 20 00:50 memory_monitor_summary.json
[2024-05-20 00:51:19] -rw------- 1 boinc boinc    271038 May 20 00:50 log.38776104._002692.job.log.tgz.1
[2024-05-20 00:51:19] -rw------- 1 boinc boinc      7710 May 20 00:51 heartbeat.json
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc        27 May 20 00:51 wrapper_checkpoint.txt
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc      8192 May 20 00:51 boinc_mmap_file
[2024-05-20 00:51:19] -rw------- 1 boinc boinc      4345 May 20 00:51 pilotlog.txt
[2024-05-20 00:51:19] -rw------- 1 boinc boinc    693813 May 20 00:51 log.38776104._002692.job.log.1
[2024-05-20 00:51:19] -rw------- 1 boinc boinc       357 May 20 00:51 output.list
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc       620 May 20 00:51 runtime_log
[2024-05-20 00:51:19] -rw------- 1 boinc boinc    983040 May 20 00:51 result.tar.gz
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc     11409 May 20 00:51 runtime_log.err
[2024-05-20 00:51:19] -rw------- 1 boinc boinc       655 May 20 00:51 QlUMDmW09Q5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmTVIKDmF6XMBo.diag
[2024-05-20 00:51:19] -rw-r--r-- 1 boinc boinc     21305 May 20 00:51 stderr.txt
[2024-05-20 00:51:19] HITS file was successfully produced:
[2024-05-20 00:51:19] -rw------- 1 boinc boinc 231663024 May 20 00:50 shared/HITS.pool.root.1
[2024-05-20 00:51:19]  *** Contents of shared directory: ***
[2024-05-20 00:51:19] total 815892
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc 602309481 May 19 22:57 ATLAS.root_0
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc     17537 May 19 22:57 start_atlas.sh
[2024-05-20 00:51:19] -rw-r--r-- 2 boinc boinc    480005 May 19 22:57 input.tar.gz
[2024-05-20 00:51:19] -rw------- 1 boinc boinc 231663024 May 20 00:50 HITS.pool.root.1
[2024-05-20 00:51:19] -rw------- 1 boinc boinc    983040 May 20 00:51 result.tar.gz
00:51:20 (4001001): run_atlas exited; CPU time 24368.999528
00:51:20 (4001001): called boinc_finish(0)

</stderr_txt>
]]>

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