Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
04:31:59 (32786): wrapper (7.7.26015): starting
04:31:59 (32786): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 04:31:59] Arguments: --nthreads 12
[2024-05-17 04:31:59] Threads: 12
[2024-05-17 04:31:59] Checking for CVMFS
[2024-05-17 04:32:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 04:32:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 04:32:00] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 04:32:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 04:32:00] 2.11.3.0 144541 183419 164656 132840 3 15 33083793 45568001 11107 130560 0 152021725 99.820 84290493 18628 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 04:32:00] CVMFS is ok
[2024-05-17 04:32:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 04:32:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 04:32:00] Further information can be found at the LHC@home message board.
[2024-05-17 04:32:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 04:32:00] Checking for apptainer binary...
[2024-05-17 04:32:00] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 04:32:00] Running /usr/bin/apptainer --version
[2024-05-17 04:32:00] apptainer version 1.1.8-1.el7
[2024-05-17 04:32:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 04:32:01] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0048.triumf.lcg
[2024-05-17 04:32:01] apptainer works
[2024-05-17 04:32:01] Set ATHENA_PROC_NUMBER=12
[2024-05-17 04:32:01] Set ATHENA_CORE_NUMBER=12
[2024-05-17 04:32:01] Starting ATLAS job with PandaID=6206174516
[2024-05-17 04:32:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 08:15:41]  *** The last 200 lines of the pilot log: ***
[2024-05-17 08:15:41] 2024-05-17 15:15:21,000 | INFO     | intersect: -59050850358.29907
[2024-05-17 08:15:41] 2024-05-17 15:15:21,000 | INFO     | chi2: 5.28435630899734
[2024-05-17 08:15:41] 2024-05-17 15:15:21,000 | INFO     | model: linear, x: [1715945553.0, 1715945614.0, 1715945675.0, 1715945736.0, 1715945797.0, 1715945858.0, 1715945919.0, 1715945980.0, 1715946041.0, 1715946102.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,000 | INFO     | sum of square deviations: 3039178661.0841174
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | sum of deviations: 109424637897.46724
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | mean x: 1715952049.9345794
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | mean y: 2705345.2476635515
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | -- intersect: -61779589364.11591
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | intersect: -61779589364.11591
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | chi2: 5.289537388217101
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | current chi2=5.289537388217101 (change=-0.09804560701062788 %)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | right removable region: 213
[2024-05-17 08:15:41] 2024-05-17 15:15:21,002 | INFO     | model: linear, x: [1715945858.0, 1715945919.0, 1715945980.0, 1715946041.0, 1715946102.0, 1715946163.0, 1715946224.0, 1715946285.0, 1715946346.0, 1715946407.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,003 | INFO     | sum of square deviations: 3039134436.210274
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | sum of deviations: 50011408451.39256
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | mean x: 1715952354.9392524
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | mean y: 2750543.953271028
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | -- intersect: -28234629508.57505
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | intersect: -28234629508.57505
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | chi2: 2.5210226887197043
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | current chi2=2.5210226887197043 (change=52.29271946656364 %)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,004 | INFO     | model: linear, x: [1715946163.0, 1715946224.0, 1715946285.0, 1715946346.0, 1715946407.0, 1715946468.0, 1715946529.0, 1715946590.0, 1715946651.0, 1715946712.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,005 | INFO     | sum of square deviations: 2831036747.7224784
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | sum of deviations: 1355751417.1578941
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | mean x: 1715952507.4497607
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | mean y: 2786206.1578947366
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | -- intersect: -818964004.4750859
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | intersect: -818964004.4750859
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | chi2: 0.9278875059065548
[2024-05-17 08:15:41] 2024-05-17 15:15:21,006 | INFO     | current chi2=0.9278875059065548 (change=63.19400416115333 %)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,007 | INFO     | model: linear, x: [1715946468.0, 1715946529.0, 1715946590.0, 1715946651.0, 1715946712.0, 1715946773.0, 1715946834.0, 1715946895.0, 1715946956.0, 1715947017.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,007 | INFO     | sum of square deviations: 2632660171.6862626
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | sum of deviations: -27576453101.019608
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | mean x: 1715952659.9607842
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | mean y: 2808291.8725490198
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | -- intersect: 17976980788.533684
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | intersect: 17976980788.533684
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | chi2: 0.17334299990805413
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | current chi2=0.17334299990805413 (change=81.31853281732721 %)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,008 | INFO     | model: linear, x: [1715946773.0, 1715946834.0, 1715946895.0, 1715946956.0, 1715947017.0, 1715947078.0, 1715947140.0, 1715947200.0, 1715947261.0, 1715947322.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,009 | INFO     | sum of square deviations: 2443772145.5979924
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | sum of deviations: -26963111451.884434
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | mean x: 1715952812.4723618
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | mean y: 2807740.8391959798
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | -- intersect: 18935598595.424034
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | intersect: 18935598595.424034
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | chi2: 0.14695077187437253
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | current chi2=0.14695077187437253 (change=15.22543630125287 %)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | left removable region: 40
[2024-05-17 08:15:41] 2024-05-17 15:15:21,010 | INFO     | model: linear, x: [1715947994.0, 1715948055.0, 1715948115.0, 1715948176.0, 1715948237.0, 1715948298.0, 1715948359.0, 1715948420.0, 1715948481.0, 1715948542.0, 1715
[2024-05-17 08:15:41] 2024-05-17 15:15:21,011 | INFO     | sum of square deviations: 1605626635.2138774
[2024-05-17 08:15:41] 2024-05-17 15:15:21,011 | INFO     | sum of deviations: 1189895894.7861273
[2024-05-17 08:15:41] 2024-05-17 15:15:21,011 | INFO     | mean x: 1715953239.4855492
[2024-05-17 08:15:41] 2024-05-17 15:15:21,011 | INFO     | mean y: 2781342.514450867
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | -- intersect: -1268875262.1586728
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | intersect: -1268875262.1586728
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | chi2: 0.03332992543313511
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | -- intersect: -1268875262.1586728
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | current memory leak: 0.74 B/s (using 173 data points, chi2=0.03)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,012 | INFO     | ..............................
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . Timing measurements:
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . get job = 0 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . initial setup = 1 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . payload setup = 4 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . stage-in = 0 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . payload execution = 13360 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . stage-out = 1 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | . log creation = 0 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,013 | INFO     | ..............................
[2024-05-17 08:15:41] 2024-05-17 15:15:21,095 | INFO     | 
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | job summary report
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | --------------------------------------------------
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | PanDA job id: 6206174516
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | task id: 38920995
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | errors: (none)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | pilot state: finished 
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | transexitcode: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | exeerrorcode: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | exeerrordiag: 
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | exitcode: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | exitmsg: OK
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | cpuconsumptiontime: 77163 s
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | nevents: 400
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | neventsw: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | pid: 43568
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | pgrp: 43568
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | corecount: 12
[2024-05-17 08:15:41] 2024-05-17 15:15:21,096 | INFO     | event service: False
[2024-05-17 08:15:41] 2024-05-17 15:15:21,097 | INFO     | sizes: {0: 2392115, 4: 2392321, 11: 2392349, 13368: 2422475, 13370: 2431429, 13371: 2431485, 13377: 2431783}
[2024-05-17 08:15:41] 2024-05-17 15:15:21,097 | INFO     | --------------------------------------------------
[2024-05-17 08:15:41] 2024-05-17 15:15:21,097 | INFO     | 
[2024-05-17 08:15:41] 2024-05-17 15:15:21,097 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 08:15:41] 2024-05-17 15:15:21,112 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,112 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,112 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,112 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | job 6206174516 has completed (purged errors)
[2024-05-17 08:15:41] 2024-05-17 15:15:21,113 | INFO     | overall cleanup function is called
[2024-05-17 08:15:41] 2024-05-17 15:15:22,120 | INFO     | --- collectZombieJob: --- 10, [43568]
[2024-05-17 08:15:41] 2024-05-17 15:15:22,121 | INFO     | zombie collector waiting for pid 43568
[2024-05-17 08:15:41] 2024-05-17 15:15:22,121 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 08:15:41] 2024-05-17 15:15:23,126 | INFO     | collected zombie processes
[2024-05-17 08:15:41] 2024-05-17 15:15:23,126 | INFO     | will now attempt to kill all subprocesses of pid=43568
[2024-05-17 08:15:41] 2024-05-17 15:15:23,339 | INFO     | process IDs to be killed: [43568] (in reverse order)
[2024-05-17 08:15:41] 2024-05-17 15:15:23,431 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 08:15:41] 2024-05-17 15:15:23,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 08:15:41] 2024-05-17 15:15:23,438 | INFO     | did not find any defunct processes belonging to 43568
[2024-05-17 08:15:41] 2024-05-17 15:15:23,444 | INFO     | did not find any defunct processes belonging to 43568
[2024-05-17 08:15:41] 2024-05-17 15:15:23,444 | INFO     | ready for new job
[2024-05-17 08:15:41] 2024-05-17 15:15:23,444 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 08:15:41] 2024-05-17 15:15:23,446 | INFO     | *************************************
[2024-05-17 08:15:41] 2024-05-17 15:15:23,446 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 08:15:41] 2024-05-17 15:15:23,446 | INFO     | *************************************
[2024-05-17 08:15:41] 2024-05-17 15:15:23,446 | INFO     | 
[2024-05-17 08:15:41] 2024-05-17 15:15:23,448 | INFO     | architecture information:
[2024-05-17 08:15:41] 2024-05-17 15:15:23,448 | INFO     | executing command: cat /etc/os-release
[2024-05-17 08:15:41] 2024-05-17 15:15:23,460 | INFO     | cat /etc/os-release:
[2024-05-17 08:15:41] NAME="CentOS Linux"
[2024-05-17 08:15:41] VERSION="7 (Core)"
[2024-05-17 08:15:41] ID="centos"
[2024-05-17 08:15:41] ID_LIKE="rhel fedora"
[2024-05-17 08:15:41] VERSION_ID="7"
[2024-05-17 08:15:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 08:15:41] ANSI_COLOR="0;31"
[2024-05-17 08:15:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 08:15:41] HOME_URL="https://www.centos.org/"
[2024-05-17 08:15:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 08:15:41] 
[2024-05-17 08:15:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 08:15:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 08:15:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 08:15:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 08:15:41] 
[2024-05-17 08:15:41] 2024-05-17 15:15:23,460 | INFO     | *************************************
[2024-05-17 08:15:41] 2024-05-17 15:15:23,963 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 08:15:41] 2024-05-17 15:15:23,981 | INFO     | sufficient remaining disk space (2091340791808 B)
[2024-05-17 08:15:41] 2024-05-17 15:15:23,981 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 08:15:41] 2024-05-17 15:15:23,981 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 08:15:41] 2024-05-17 15:15:23,982 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:15:41] 2024-05-17 15:15:23,982 | INFO     | aborting loop
[2024-05-17 08:15:41] 2024-05-17 15:15:24,010 | INFO     | all job control threads have been joined
[2024-05-17 08:15:41] 2024-05-17 15:15:24,276 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 08:15:41] 2024-05-17 15:15:24,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 08:15:41] 2024-05-17 15:15:24,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 08:15:41] 2024-05-17 15:15:24,705 | INFO     | all data control threads have been joined
[2024-05-17 08:15:41] 2024-05-17 15:15:24,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 08:15:41] 2024-05-17 15:15:24,986 | INFO     | [job] job monitor thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:24,989 | INFO     | [job] retrieve thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,018 | INFO     | [job] control thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,067 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,410 | INFO     | all payload control threads have been joined
[2024-05-17 08:15:41] 2024-05-17 15:15:25,477 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,573 | INFO     | [payload] failed_post thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,709 | INFO     | [data] control thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:25,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 08:15:41] 2024-05-17 15:15:26,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 08:15:41] 2024-05-17 15:15:26,325 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:26,378 | INFO     | [payload] validate_post thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:26,416 | INFO     | [payload] control thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:26,476 | INFO     | [job] validate thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:26,476 | INFO     | [data] copytool_in thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:26,921 | INFO     | [data] copytool_out thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:27,088 | INFO     | [job] queue monitor thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:29,728 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:34,088 | INFO     | job.realtimelogging is not enabled
[2024-05-17 08:15:41] 2024-05-17 15:15:35,093 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 08:15:41] 2024-05-17 15:15:35,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742422759232)>', '<ExcThread(monitor, started 139741693458176)>']
[2024-05-17 08:15:41] 2024-05-17 15:15:36,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 08:15:41] 2024-05-17 15:15:36,326 | INFO     | [monitor] control thread has ended
[2024-05-17 08:15:41] 2024-05-17 15:15:40,468 | INFO     | all workflow threads have been joined
[2024-05-17 08:15:41] 2024-05-17 15:15:40,468 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 08:15:41] 2024-05-17 15:15:40,468 | INFO     | traces error code: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:40,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 08:15:41] 2024-05-17 15:15:40,547 [wrapper] ==== pilot stdout END ====
[2024-05-17 08:15:41] 2024-05-17 15:15:40,634 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 08:15:41] 2024-05-17 15:15:40,643 [wrapper] pilotpid: 37007
[2024-05-17 08:15:41] 2024-05-17 15:15:40,652 [wrapper] Pilot exit status: 0
[2024-05-17 08:15:41] 2024-05-17 15:15:40,691 [wrapper] pandaids: 6206174516
[2024-05-17 08:15:41] 2024-05-17 15:15:40,754 [wrapper] cleanup: SIGTERM to supervisor_pilot 124991 37008
[2024-05-17 08:15:41] 2024-05-17 15:15:40,756 [wrapper] Test setup, not cleaning
[2024-05-17 08:15:41] 2024-05-17 15:15:40,758 [wrapper] ==== wrapper stdout END ====
[2024-05-17 08:15:41] 2024-05-17 15:15:40,760 [wrapper] ==== wrapper stderr END ====
[2024-05-17 08:15:41] 2024-05-17 15:15:40,763 [wrapper] apfmon messages muted
[2024-05-17 08:15:41]  *** Error codes and diagnostics ***
[2024-05-17 08:15:41]     "exeErrorCode": 0,
[2024-05-17 08:15:41]     "exeErrorDiag": "",
[2024-05-17 08:15:41]     "pilotErrorCode": 0,
[2024-05-17 08:15:41]     "pilotErrorDiag": "",
[2024-05-17 08:15:41]  *** Listing of results directory ***
[2024-05-17 08:15:41] total 965492
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc    467845 May 14 08:24 pilot3.tar.gz
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc      5633 May 14 08:41 queuedata.json
[2024-05-17 08:15:41] -rwx------ 1 boinc boinc     32251 May 14 08:41 runpilot2-wrapper.sh
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc       100 May 17 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 08:15:41] -rwxr-xr-x 1 boinc boinc      7986 May 17 04:31 run_atlas
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc       105 May 17 04:31 job.xml
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc 630470720 May 17 04:31 EVNT.38776180._000011.pool.root.1
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc      6627 May 17 04:31 init_data.xml
[2024-05-17 08:15:41] drwxrwx--x 2 boinc boinc      4096 May 17 04:31 shared
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc    479991 May 17 04:31 input.tar.gz
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc     17537 May 17 04:31 start_atlas.sh
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc         0 May 17 04:31 boinc_lockfile
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc      2610 May 17 04:32 pandaJob.out
[2024-05-17 08:15:41] -rw------- 1 boinc boinc       424 May 17 04:32 setup.sh.local
[2024-05-17 08:15:41] -rw------- 1 boinc boinc   1019378 May 17 04:32 agis_schedconf.cvmfs.json
[2024-05-17 08:15:41] -rw------- 1 boinc boinc   1324701 May 17 04:32 cric_ddmendpoints.json
[2024-05-17 08:15:41] drwx------ 4 boinc boinc      4096 May 17 04:32 pilot3
[2024-05-17 08:15:41] -rw------- 1 boinc boinc 351253017 May 17 08:14 HITS.38920995._000293.pool.root.1
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc       532 May 17 08:14 boinc_task_state.xml
[2024-05-17 08:15:41] -rw------- 1 boinc boinc        95 May 17 08:14 pilot_heartbeat.json
[2024-05-17 08:15:41] -rw------- 1 boinc boinc      1060 May 17 08:15 memory_monitor_summary.json
[2024-05-17 08:15:41] -rw------- 1 boinc boinc         0 May 17 08:15 agis_ddmendpoints.agis.ALL.json
[2024-05-17 08:15:41] -rw------- 1 boinc boinc    456847 May 17 08:15 log.38920995._000293.job.log.tgz.1
[2024-05-17 08:15:41] -rw------- 1 boinc boinc      7772 May 17 08:15 heartbeat.json
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc      8192 May 17 08:15 boinc_mmap_file
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc        28 May 17 08:15 wrapper_checkpoint.txt
[2024-05-17 08:15:41] -rw------- 1 boinc boinc      4282 May 17 08:15 pilotlog.txt
[2024-05-17 08:15:41] -rw------- 1 boinc boinc   1248434 May 17 08:15 log.38920995._000293.job.log.1
[2024-05-17 08:15:41] -rw------- 1 boinc boinc       357 May 17 08:15 output.list
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc       620 May 17 08:15 runtime_log
[2024-05-17 08:15:41] -rw------- 1 boinc boinc   1720320 May 17 08:15 result.tar.gz
[2024-05-17 08:15:41] -rw------- 1 boinc boinc       659 May 17 08:15 whMLDmzS9Q5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmnTIKDmN1K7Nm.diag
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc     11287 May 17 08:15 runtime_log.err
[2024-05-17 08:15:41] -rw-r--r-- 1 boinc boinc     21896 May 17 08:15 stderr.txt
[2024-05-17 08:15:41] HITS file was successfully produced:
[2024-05-17 08:15:41] -rw------- 1 boinc boinc 351253017 May 17 08:14 shared/HITS.pool.root.1
[2024-05-17 08:15:41]  *** Contents of shared directory: ***
[2024-05-17 08:15:41] total 960900
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc 630470720 May 17 04:31 ATLAS.root_0
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc    479991 May 17 04:31 input.tar.gz
[2024-05-17 08:15:41] -rw-r--r-- 2 boinc boinc     17537 May 17 04:31 start_atlas.sh
[2024-05-17 08:15:41] -rw------- 1 boinc boinc 351253017 May 17 08:14 HITS.pool.root.1
[2024-05-17 08:15:41] -rw------- 1 boinc boinc   1720320 May 17 08:15 result.tar.gz
08:15:43 (32786): run_atlas exited; CPU time 76780.027690
08:15:43 (32786): called boinc_finish(0)

</stderr_txt>
]]>

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