Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:13:39 (3937621): wrapper (7.7.26015): starting
23:13:39 (3937621): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 23:13:39] Arguments: --nthreads 4
[2024-05-15 23:13:39] Threads: 4
[2024-05-15 23:13:39] Checking for CVMFS
[2024-05-15 23:13:39] No cvmfs_config command found, will try listing directly
[2024-05-15 23:13:39] CVMFS is ok
[2024-05-15 23:13:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 23:13:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 23:13:39] Further information can be found at the LHC@home message board.
[2024-05-15 23:13:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 23:13:39] Checking for apptainer binary...
[2024-05-15 23:13:39] which: no apptainer in ((null))
[2024-05-15 23:13:39] apptainer is not installed, using version from CVMFS
[2024-05-15 23:13:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 23:13:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-15 23:13:40] apptainer works
[2024-05-15 23:13:40] Set ATHENA_PROC_NUMBER=4
[2024-05-15 23:13:40] Set ATHENA_CORE_NUMBER=4
[2024-05-15 23:13:40] Starting ATLAS job with PandaID=6206160603
[2024-05-15 23:13:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 03:32:43]  *** The last 200 lines of the pilot log: ***
[2024-05-16 03:32:43] 2024-05-16 01:32:27,877 | INFO     | -- intersect: -4848385036.988667
[2024-05-16 03:32:43] 2024-05-16 01:32:27,877 | INFO     | intersect: -4848385036.988667
[2024-05-16 03:32:43] 2024-05-16 01:32:27,877 | INFO     | chi2: 0.06496736462790942
[2024-05-16 03:32:43] 2024-05-16 01:32:27,877 | INFO     | current chi2=0.06496736462790942 (change=96.06334885171565 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,878 | INFO     | model: linear, x: [1715808575.0, 1715808636.0, 1715808697.0, 1715808758.0, 1715808819.0, 1715808880.0, 1715808941.0, 1715809002.0, 1715809063.0, 1715809124.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,878 | INFO     | sum of square deviations: 4233158440.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | sum of deviations: 4739186623.999999
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | mean x: 1715815834.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | mean y: 2369986.3891213387
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | -- intersect: -1918553022.9892385
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | intersect: -1918553022.9892385
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | chi2: 0.0022092591942028893
[2024-05-16 03:32:43] 2024-05-16 01:32:27,880 | INFO     | current chi2=0.0022092591942028893 (change=96.59943233521001 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,881 | INFO     | model: linear, x: [1715808880.0, 1715808941.0, 1715809002.0, 1715809063.0, 1715809124.0, 1715809185.0, 1715809246.0, 1715809307.0, 1715809368.0, 1715809429.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,881 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | sum of deviations: 3033936992.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | mean x: 1715815986.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | mean y: 2370984.5982905985
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | -- intersect: -1307894203.0800934
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | intersect: -1307894203.0800934
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | chi2: 0.0007061926311564407
[2024-05-16 03:32:43] 2024-05-16 01:32:27,883 | INFO     | current chi2=0.0007061926311564407 (change=68.03486738860272 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,884 | INFO     | model: linear, x: [1715809185.0, 1715809246.0, 1715809307.0, 1715809368.0, 1715809429.0, 1715809490.0, 1715809551.0, 1715809612.0, 1715809673.0, 1715809734.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,884 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,885 | INFO     | sum of deviations: 2219558383.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,885 | INFO     | mean x: 1715816139.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,885 | INFO     | mean y: 2371482.3668122273
[2024-05-16 03:32:43] 2024-05-16 01:32:27,886 | INFO     | -- intersect: -1020357898.0433608
[2024-05-16 03:32:43] 2024-05-16 01:32:27,886 | INFO     | intersect: -1020357898.0433608
[2024-05-16 03:32:43] 2024-05-16 01:32:27,886 | INFO     | chi2: 0.000403457493667916
[2024-05-16 03:32:43] 2024-05-16 01:32:27,886 | INFO     | current chi2=0.000403457493667916 (change=42.86863443941271 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,886 | INFO     | model: linear, x: [1715809490.0, 1715809551.0, 1715809612.0, 1715809673.0, 1715809734.0, 1715809795.0, 1715809856.0, 1715809917.0, 1715809978.0, 1715810039.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,887 | INFO     | sum of square deviations: 3485088600.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,888 | INFO     | sum of deviations: 1683580388.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,888 | INFO     | mean x: 1715816291.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,888 | INFO     | mean y: 2371823.3883928573
[2024-05-16 03:32:43] 2024-05-16 01:32:27,888 | INFO     | -- intersect: -826506575.4672917
[2024-05-16 03:32:43] 2024-05-16 01:32:27,888 | INFO     | intersect: -826506575.4672917
[2024-05-16 03:32:43] 2024-05-16 01:32:27,889 | INFO     | chi2: 0.00024624910896865114
[2024-05-16 03:32:43] 2024-05-16 01:32:27,889 | INFO     | current chi2=0.00024624910896865114 (change=38.96529056135523 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,889 | INFO     | model: linear, x: [1715809795.0, 1715809856.0, 1715809917.0, 1715809978.0, 1715810039.0, 1715810100.0, 1715810161.0, 1715810222.0, 1715810283.0, 1715810344.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,889 | INFO     | sum of square deviations: 3256879670.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | sum of deviations: 1609372272.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | mean x: 1715816444.0
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | mean y: 2371872.4337899545
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | -- intersect: -845491017.3902117
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | intersect: -845491017.3902117
[2024-05-16 03:32:43] 2024-05-16 01:32:27,891 | INFO     | chi2: 0.00023797427825904038
[2024-05-16 03:32:43] 2024-05-16 01:32:27,892 | INFO     | current chi2=0.00023797427825904038 (change=3.3603495030977704 %)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,892 | INFO     | left removable region: 70
[2024-05-16 03:32:43] 2024-05-16 01:32:27,892 | INFO     | model: linear, x: [1715811930.0, 1715811991.0, 1715812052.0, 1715812113.0, 1715812174.0, 1715812235.0, 1715812296.0, 1715812357.0, 1715812418.0, 1715812479.0, 1715
[2024-05-16 03:32:43] 2024-05-16 01:32:27,892 | INFO     | sum of square deviations: 1748737904.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,893 | INFO     | sum of deviations: 423826352.9999999
[2024-05-16 03:32:43] 2024-05-16 01:32:27,893 | INFO     | mean x: 1715817328.5
[2024-05-16 03:32:43] 2024-05-16 01:32:27,893 | INFO     | mean y: 2372607.5393258426
[2024-05-16 03:32:43] 2024-05-16 01:32:27,893 | INFO     | -- intersect: -413475072.5967558
[2024-05-16 03:32:43] 2024-05-16 01:32:27,893 | INFO     | intersect: -413475072.5967558
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | chi2: 2.693811614710431e-05
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | -- intersect: -413475072.5967558
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | current memory leak: 0.24 B/s (using 178 data points, chi2=0.00)
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | ..............................
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | . Timing measurements:
[2024-05-16 03:32:43] 2024-05-16 01:32:27,894 | INFO     | . get job = 0 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . initial setup = 1 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . payload setup = 6 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . stage-in = 0 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . payload execution = 15481 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . stage-out = 1 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | . log creation = 0 s
[2024-05-16 03:32:43] 2024-05-16 01:32:27,895 | INFO     | ..............................
[2024-05-16 03:32:43] 2024-05-16 01:32:28,287 | INFO     | 
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | job summary report
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | --------------------------------------------------
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | PanDA job id: 6206160603
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | task id: 38776146
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | errors: (none)
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | pilot state: finished 
[2024-05-16 03:32:43] 2024-05-16 01:32:28,288 | INFO     | transexitcode: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | exeerrorcode: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | exeerrordiag: 
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | exitcode: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | exitmsg: OK
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | cpuconsumptiontime: 58917 s
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | nevents: 400
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | neventsw: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | pid: 3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | pgrp: 3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | corecount: 4
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | event service: False
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | sizes: {0: 2392191, 6: 2392397, 11: 2392425, 15491: 2423473, 15493: 2432513, 15500: 2432627}
[2024-05-16 03:32:43] 2024-05-16 01:32:28,289 | INFO     | --------------------------------------------------
[2024-05-16 03:32:43] 2024-05-16 01:32:28,290 | INFO     | 
[2024-05-16 03:32:43] 2024-05-16 01:32:28,290 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/1
[2024-05-16 03:32:43] 2024-05-16 01:32:28,322 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,323 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | job 6206160603 has completed (purged errors)
[2024-05-16 03:32:43] 2024-05-16 01:32:28,324 | INFO     | overall cleanup function is called
[2024-05-16 03:32:43] 2024-05-16 01:32:29,331 | INFO     | --- collectZombieJob: --- 10, [3952067]
[2024-05-16 03:32:43] 2024-05-16 01:32:29,332 | INFO     | zombie collector waiting for pid 3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:29,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 03:32:43] 2024-05-16 01:32:30,336 | INFO     | collected zombie processes
[2024-05-16 03:32:43] 2024-05-16 01:32:30,337 | INFO     | will now attempt to kill all subprocesses of pid=3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:30,618 | INFO     | process IDs to be killed: [3952067] (in reverse order)
[2024-05-16 03:32:43] 2024-05-16 01:32:30,871 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 03:32:43] 2024-05-16 01:32:30,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 03:32:43] 2024-05-16 01:32:30,891 | INFO     | did not find any defunct processes belonging to 3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:30,910 | INFO     | did not find any defunct processes belonging to 3952067
[2024-05-16 03:32:43] 2024-05-16 01:32:30,911 | INFO     | ready for new job
[2024-05-16 03:32:43] 2024-05-16 01:32:30,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 03:32:43] 2024-05-16 01:32:30,913 | INFO     | *************************************
[2024-05-16 03:32:43] 2024-05-16 01:32:30,913 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 03:32:43] 2024-05-16 01:32:30,913 | INFO     | *************************************
[2024-05-16 03:32:43] 2024-05-16 01:32:30,913 | INFO     | 
[2024-05-16 03:32:43] 2024-05-16 01:32:30,920 | INFO     | architecture information:
[2024-05-16 03:32:43] 2024-05-16 01:32:30,920 | INFO     | executing command: cat /etc/os-release
[2024-05-16 03:32:43] 2024-05-16 01:32:30,943 | INFO     | cat /etc/os-release:
[2024-05-16 03:32:43] NAME="CentOS Linux"
[2024-05-16 03:32:43] VERSION="7 (Core)"
[2024-05-16 03:32:43] ID="centos"
[2024-05-16 03:32:43] ID_LIKE="rhel fedora"
[2024-05-16 03:32:43] VERSION_ID="7"
[2024-05-16 03:32:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 03:32:43] ANSI_COLOR="0;31"
[2024-05-16 03:32:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 03:32:43] HOME_URL="https://www.centos.org/"
[2024-05-16 03:32:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 03:32:43] 
[2024-05-16 03:32:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 03:32:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 03:32:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 03:32:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 03:32:43] 
[2024-05-16 03:32:43] 2024-05-16 01:32:30,944 | INFO     | *************************************
[2024-05-16 03:32:43] 2024-05-16 01:32:31,447 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/1
[2024-05-16 03:32:43] 2024-05-16 01:32:31,474 | INFO     | sufficient remaining disk space (3170263629824 B)
[2024-05-16 03:32:43] 2024-05-16 01:32:31,475 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 03:32:43] 2024-05-16 01:32:31,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 03:32:43] 2024-05-16 01:32:31,478 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 03:32:43] 2024-05-16 01:32:31,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:32:43] 2024-05-16 01:32:31,611 | INFO     | aborting loop
[2024-05-16 03:32:43] 2024-05-16 01:32:31,843 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 03:32:43] 2024-05-16 01:32:31,843 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 03:32:43] 2024-05-16 01:32:31,843 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 03:32:43] 2024-05-16 01:32:31,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 03:32:43] 2024-05-16 01:32:31,966 | INFO     | all payload control threads have been joined
[2024-05-16 03:32:43] 2024-05-16 01:32:32,480 | INFO     | [job] retrieve thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:32,529 | INFO     | all data control threads have been joined
[2024-05-16 03:32:43] 2024-05-16 01:32:32,616 | INFO     | [job] job monitor thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:32,632 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:32,972 | INFO     | [payload] control thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:32,999 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:32:43] 2024-05-16 01:32:33,021 | INFO     | [payload] validate_post thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,084 | INFO     | all job control threads have been joined
[2024-05-16 03:32:43] 2024-05-16 01:32:33,259 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,293 | INFO     | [data] copytool_in thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,365 | INFO     | [job] validate thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,432 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,484 | INFO     | [data] copytool_out thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,503 | INFO     | [payload] failed_post thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,535 | INFO     | [data] control thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:33,913 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:34,004 | INFO     | [job] queue monitor thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:34,090 | INFO     | [job] control thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:35,918 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 03:32:43] 2024-05-16 01:32:36,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47303942640704)>', '<ExcThread(monitor, started 47304120194816)>']
[2024-05-16 03:32:43] 2024-05-16 01:32:37,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 03:32:43] 2024-05-16 01:32:37,873 | INFO     | [monitor] control thread has ended
[2024-05-16 03:32:43] 2024-05-16 01:32:41,963 | INFO     | all workflow threads have been joined
[2024-05-16 03:32:43] 2024-05-16 01:32:41,964 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 03:32:43] 2024-05-16 01:32:41,964 | INFO     | traces error code: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:41,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 03:32:43] 2024-05-16 01:32:42,063 [wrapper] ==== pilot stdout END ====
[2024-05-16 03:32:43] 2024-05-16 01:32:42,066 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 03:32:43] 2024-05-16 01:32:42,068 [wrapper] pilotpid: 3942267
[2024-05-16 03:32:43] 2024-05-16 01:32:42,069 [wrapper] Pilot exit status: 0
[2024-05-16 03:32:43] 2024-05-16 01:32:42,076 [wrapper] pandaids: 6206160603
[2024-05-16 03:32:43] 2024-05-16 01:32:42,212 [wrapper] cleanup: SIGTERM to supervisor_pilot 1119586 3942268
[2024-05-16 03:32:43] 2024-05-16 01:32:42,216 [wrapper] Test setup, not cleaning
[2024-05-16 03:32:43] 2024-05-16 01:32:42,219 [wrapper] ==== wrapper stdout END ====
[2024-05-16 03:32:43] 2024-05-16 01:32:42,221 [wrapper] ==== wrapper stderr END ====
[2024-05-16 03:32:43] 2024-05-16 01:32:42,235 [wrapper] apfmon messages muted
[2024-05-16 03:32:43]  *** Error codes and diagnostics ***
[2024-05-16 03:32:43]     "exeErrorCode": 0,
[2024-05-16 03:32:43]     "exeErrorDiag": "",
[2024-05-16 03:32:43]     "pilotErrorCode": 0,
[2024-05-16 03:32:43]     "pilotErrorDiag": "",
[2024-05-16 03:32:43]  *** Listing of results directory ***
[2024-05-16 03:32:43] total 878704
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc      5633 May 14 16:28 queuedata.json
[2024-05-16 03:32:43] -rwx------ 1 boinc boinc     32251 May 14 16:29 runpilot2-wrapper.sh
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc    467845 May 14 16:29 pilot3.tar.gz
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc       100 May 15 23:13 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 03:32:43] -rwxr-xr-x 1 boinc boinc      7986 May 15 23:13 run_atlas
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc       105 May 15 23:13 job.xml
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc      6645 May 15 23:13 init_data.xml
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc 614424846 May 15 23:13 EVNT.38776140._000504.pool.root.1
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc     17537 May 15 23:13 start_atlas.sh
[2024-05-16 03:32:43] drwxrwx--x 2 boinc boinc      4096 May 15 23:13 shared
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc    479991 May 15 23:13 input.tar.gz
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc         0 May 15 23:13 boinc_lockfile
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc      2616 May 15 23:13 pandaJob.out
[2024-05-16 03:32:43] -rw------- 1 boinc boinc       424 May 15 23:13 setup.sh.local
[2024-05-16 03:32:43] -rw------- 1 boinc boinc   1011331 May 15 23:13 agis_schedconf.cvmfs.json
[2024-05-16 03:32:43] -rw------- 1 boinc boinc   1324701 May 15 23:13 cric_ddmendpoints.json
[2024-05-16 03:32:43] drwx------ 4 boinc boinc      4096 May 15 23:13 pilot3
[2024-05-16 03:32:43] -rw------- 1 boinc boinc 277679218 May 16 03:31 HITS.38776146._013306.pool.root.1
[2024-05-16 03:32:43] -rw------- 1 boinc boinc        95 May 16 03:31 pilot_heartbeat.json
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc       532 May 16 03:31 boinc_task_state.xml
[2024-05-16 03:32:43] -rw------- 1 boinc boinc      1042 May 16 03:32 memory_monitor_summary.json
[2024-05-16 03:32:43] -rw------- 1 boinc boinc         0 May 16 03:32 agis_ddmendpoints.agis.ALL.json
[2024-05-16 03:32:43] -rw------- 1 boinc boinc    354967 May 16 03:32 log.38776146._013306.job.log.tgz.1
[2024-05-16 03:32:43] -rw------- 1 boinc boinc      7723 May 16 03:32 heartbeat.json
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc      8192 May 16 03:32 boinc_mmap_file
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc        28 May 16 03:32 wrapper_checkpoint.txt
[2024-05-16 03:32:43] -rw------- 1 boinc boinc      4223 May 16 03:32 pilotlog.txt
[2024-05-16 03:32:43] -rw------- 1 boinc boinc   1728444 May 16 03:32 log.38776146._013306.job.log.1
[2024-05-16 03:32:43] -rw------- 1 boinc boinc       357 May 16 03:32 output.list
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc       620 May 16 03:32 runtime_log
[2024-05-16 03:32:43] -rw------- 1 boinc boinc   2099200 May 16 03:32 result.tar.gz
[2024-05-16 03:32:43] -rw------- 1 boinc boinc       658 May 16 03:32 z0jLDm0K8Q5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmgPIKDm4pgoPm.diag
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc     11429 May 16 03:32 runtime_log.err
[2024-05-16 03:32:43] -rw-r--r-- 1 boinc boinc     21340 May 16 03:32 stderr.txt
[2024-05-16 03:32:43] HITS file was successfully produced:
[2024-05-16 03:32:43] -rw------- 1 boinc boinc 277679218 May 16 03:31 shared/HITS.pool.root.1
[2024-05-16 03:32:43]  *** Contents of shared directory: ***
[2024-05-16 03:32:43] total 873752
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc 614424846 May 15 23:13 ATLAS.root_0
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc     17537 May 15 23:13 start_atlas.sh
[2024-05-16 03:32:43] -rw-r--r-- 2 boinc boinc    479991 May 15 23:13 input.tar.gz
[2024-05-16 03:32:43] -rw------- 1 boinc boinc 277679218 May 16 03:31 HITS.pool.root.1
[2024-05-16 03:32:43] -rw------- 1 boinc boinc   2099200 May 16 03:32 result.tar.gz
03:32:45 (3937621): run_atlas exited; CPU time 58579.303852
03:32:45 (3937621): called boinc_finish(0)

</stderr_txt>
]]>

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