Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:18 (3251371): wrapper (7.7.26015): starting
06:34:18 (3251371): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 06:34:18] Arguments: --nthreads 4
[2024-05-18 06:34:18] Threads: 4
[2024-05-18 06:34:18] Checking for CVMFS
[2024-05-18 06:34:18] No cvmfs_config command found, will try listing directly
[2024-05-18 06:34:18] CVMFS is ok
[2024-05-18 06:34:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 06:34:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 06:34:18] Further information can be found at the LHC@home message board.
[2024-05-18 06:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 06:34:18] Checking for apptainer binary...
[2024-05-18 06:34:18] which: no apptainer in ((null))
[2024-05-18 06:34:18] apptainer is not installed, using version from CVMFS
[2024-05-18 06:34:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 06:34:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-18 06:34:19] apptainer works
[2024-05-18 06:34:19] Set ATHENA_PROC_NUMBER=4
[2024-05-18 06:34:19] Set ATHENA_CORE_NUMBER=4
[2024-05-18 06:34:19] Starting ATLAS job with PandaID=6206146658
[2024-05-18 06:34:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 08:29:47]  *** The last 200 lines of the pilot log: ***
[2024-05-18 08:29:47] 2024-05-18 06:29:30,073 | WARNING  | GPU info not found in prmon json
[2024-05-18 08:29:47] 2024-05-18 06:29:30,074 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 08:29:47] 2024-05-18 06:29:30,074 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 08:29:47] 2024-05-18 06:29:30,077 | INFO     | fitting pss+swap vs Time
[2024-05-18 08:29:47] 2024-05-18 06:29:30,077 | INFO     | model: linear, x: [1716006895.0, 1716006956.0, 1716007017.0, 1716007078.0, 1716007139.0, 1716007200.0, 1716007261.0, 1716007322.0, 1716007383.0, 1716007444.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,077 | INFO     | sum of square deviations: 447383272.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,078 | INFO     | sum of deviations: 25938537668.999992
[2024-05-18 08:29:47] 2024-05-18 06:29:30,078 | INFO     | mean x: 1716010311.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,078 | INFO     | mean y: 2308601.8584070797
[2024-05-18 08:29:47] 2024-05-18 06:29:30,078 | INFO     | -- intersect: -99489113804.8915
[2024-05-18 08:29:47] 2024-05-18 06:29:30,078 | INFO     | intersect: -99489113804.8915
[2024-05-18 08:29:47] 2024-05-18 06:29:30,079 | INFO     | chi2: 3.795546845653936
[2024-05-18 08:29:47] 2024-05-18 06:29:30,079 | INFO     | model: linear, x: [1716006895.0, 1716006956.0, 1716007017.0, 1716007078.0, 1716007139.0, 1716007200.0, 1716007261.0, 1716007322.0, 1716007383.0, 1716007444.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,079 | INFO     | sum of square deviations: 390582207.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | sum of deviations: 25172449526.99999
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | mean x: 1716010158.5
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | mean y: 2306544.5555555555
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | -- intersect: -110592027576.40582
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | intersect: -110592027576.40582
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | chi2: 3.8008763600255895
[2024-05-18 08:29:47] 2024-05-18 06:29:30,080 | INFO     | current chi2=3.8008763600255895 (change=-0.1404149280295653 %)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,081 | INFO     | right removable region: 107
[2024-05-18 08:29:47] 2024-05-18 06:29:30,081 | INFO     | model: linear, x: [1716007200.0, 1716007261.0, 1716007322.0, 1716007383.0, 1716007444.0, 1716007505.0, 1716007566.0, 1716007627.0, 1716007688.0, 1716007749.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,081 | INFO     | sum of square deviations: 390582207.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,081 | INFO     | sum of deviations: 1957828855.0000012
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | mean x: 1716010463.5
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | mean y: 2372589.907407407
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | -- intersect: -8599286012.841557
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | intersect: -8599286012.841557
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | chi2: 1.4336856451552826
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | current chi2=1.4336856451552826 (change=62.22716505799647 %)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,082 | INFO     | model: linear, x: [1716007505.0, 1716007566.0, 1716007627.0, 1716007688.0, 1716007749.0, 1716007810.0, 1716007871.0, 1716007932.0, 1716007993.0, 1716008054.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | sum of square deviations: 338804492.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | sum of deviations: -16148421298.000002
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | mean x: 1716010616.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | mean y: 2425943.6019417476
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | -- intersect: 81792552796.4906
[2024-05-18 08:29:47] 2024-05-18 06:29:30,083 | INFO     | intersect: 81792552796.4906
[2024-05-18 08:29:47] 2024-05-18 06:29:30,084 | INFO     | chi2: 0.14171628362184746
[2024-05-18 08:29:47] 2024-05-18 06:29:30,084 | INFO     | current chi2=0.14171628362184746 (change=90.11524708357541 %)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,084 | INFO     | model: linear, x: [1716007810.0, 1716007871.0, 1716007932.0, 1716007993.0, 1716008054.0, 1716008115.0, 1716008176.0, 1716008237.0, 1716008298.0, 1716008359.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,084 | INFO     | sum of square deviations: 291817564.5
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | sum of deviations: -15572542044.499998
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | mean x: 1716010768.5
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | mean y: 2423856.3775510206
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | -- intersect: 91575560953.41135
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | intersect: 91575560953.41135
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | chi2: 0.10800898983526132
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | current chi2=0.10800898983526132 (change=23.785053435729324 %)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,085 | INFO     | left removable region: 30
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | model: linear, x: [1716008725.0, 1716008786.0, 1716008847.0, 1716008908.0, 1716008969.0, 1716009030.0, 1716009091.0, 1716009152.0, 1716009213.0, 1716009274.0, 1716
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | sum of square deviations: 141539398.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | sum of deviations: -5873817855.999999
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | mean x: 1716011043.0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | mean y: 2389285.2337662335
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | -- intersect: 71216033315.75722
[2024-05-18 08:29:47] 2024-05-18 06:29:30,086 | INFO     | intersect: 71216033315.75722
[2024-05-18 08:29:47] 2024-05-18 06:29:30,087 | INFO     | chi2: 0.08070208094098891
[2024-05-18 08:29:47] 2024-05-18 06:29:30,087 | INFO     | -- intersect: 71216033315.75722
[2024-05-18 08:29:47] 2024-05-18 06:29:30,087 | INFO     | current memory leak: -41.50 B/s (using 77 data points, chi2=0.08)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,087 | INFO     | ..............................
[2024-05-18 08:29:47] 2024-05-18 06:29:30,087 | INFO     | . Timing measurements:
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . get job = 0 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . initial setup = 1 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . payload setup = 5 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . stage-in = 0 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . payload execution = 6869 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . stage-out = 0 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | . log creation = 0 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,088 | INFO     | ..............................
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | 
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | job summary report
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | --------------------------------------------------
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | PanDA job id: 6206146658
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | task id: 38776125
[2024-05-18 08:29:47] 2024-05-18 06:29:30,198 | INFO     | errors: (none)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | pilot state: finished 
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | transexitcode: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | exeerrorcode: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | exeerrordiag: 
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | exitcode: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | exitmsg: OK
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | cpuconsumptiontime: 24925 s
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | nevents: 400
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | neventsw: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | pid: 3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | pgrp: 3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | corecount: 4
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | event service: False
[2024-05-18 08:29:47] 2024-05-18 06:29:30,199 | INFO     | sizes: {0: 2392046, 1: 2392160, 5: 2392394, 11: 2392450, 6879: 2419634, 6880: 2428618, 6882: 2428802, 6886: 2428972}
[2024-05-18 08:29:47] 2024-05-18 06:29:30,200 | INFO     | --------------------------------------------------
[2024-05-18 08:29:47] 2024-05-18 06:29:30,200 | INFO     | 
[2024-05-18 08:29:47] 2024-05-18 06:29:30,200 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-18 08:29:47] 2024-05-18 06:29:30,220 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | job 6206146658 has completed (purged errors)
[2024-05-18 08:29:47] 2024-05-18 06:29:30,222 | INFO     | overall cleanup function is called
[2024-05-18 08:29:47] 2024-05-18 06:29:31,230 | INFO     | --- collectZombieJob: --- 10, [3263929]
[2024-05-18 08:29:47] 2024-05-18 06:29:31,230 | INFO     | zombie collector waiting for pid 3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:31,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 08:29:47] 2024-05-18 06:29:32,235 | INFO     | collected zombie processes
[2024-05-18 08:29:47] 2024-05-18 06:29:32,236 | INFO     | will now attempt to kill all subprocesses of pid=3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:32,398 | INFO     | process IDs to be killed: [3263929] (in reverse order)
[2024-05-18 08:29:47] 2024-05-18 06:29:32,508 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 08:29:47] 2024-05-18 06:29:32,508 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 08:29:47] 2024-05-18 06:29:32,520 | INFO     | did not find any defunct processes belonging to 3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:32,528 | INFO     | did not find any defunct processes belonging to 3263929
[2024-05-18 08:29:47] 2024-05-18 06:29:32,528 | INFO     | ready for new job
[2024-05-18 08:29:47] 2024-05-18 06:29:32,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 08:29:47] 2024-05-18 06:29:32,529 | INFO     | *************************************
[2024-05-18 08:29:47] 2024-05-18 06:29:32,529 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 08:29:47] 2024-05-18 06:29:32,529 | INFO     | *************************************
[2024-05-18 08:29:47] 2024-05-18 06:29:32,529 | INFO     | 
[2024-05-18 08:29:47] 2024-05-18 06:29:32,534 | INFO     | architecture information:
[2024-05-18 08:29:47] 2024-05-18 06:29:32,534 | INFO     | executing command: cat /etc/os-release
[2024-05-18 08:29:47] 2024-05-18 06:29:32,549 | INFO     | cat /etc/os-release:
[2024-05-18 08:29:47] NAME="CentOS Linux"
[2024-05-18 08:29:47] VERSION="7 (Core)"
[2024-05-18 08:29:47] ID="centos"
[2024-05-18 08:29:47] ID_LIKE="rhel fedora"
[2024-05-18 08:29:47] VERSION_ID="7"
[2024-05-18 08:29:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 08:29:47] ANSI_COLOR="0;31"
[2024-05-18 08:29:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 08:29:47] HOME_URL="https://www.centos.org/"
[2024-05-18 08:29:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 08:29:47] 
[2024-05-18 08:29:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 08:29:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 08:29:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 08:29:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 08:29:47] 
[2024-05-18 08:29:47] 2024-05-18 06:29:32,550 | INFO     | *************************************
[2024-05-18 08:29:47] 2024-05-18 06:29:33,053 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-18 08:29:47] 2024-05-18 06:29:33,068 | INFO     | sufficient remaining disk space (2975527337984 B)
[2024-05-18 08:29:47] 2024-05-18 06:29:33,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 08:29:47] 2024-05-18 06:29:33,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 08:29:47] 2024-05-18 06:29:33,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 08:29:47] 2024-05-18 06:29:33,190 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:29:47] 2024-05-18 06:29:33,190 | INFO     | aborting loop
[2024-05-18 08:29:47] 2024-05-18 06:29:33,284 | INFO     | all payload control threads have been joined
[2024-05-18 08:29:47] 2024-05-18 06:29:33,530 | INFO     | all data control threads have been joined
[2024-05-18 08:29:47] 2024-05-18 06:29:33,587 | INFO     | all job control threads have been joined
[2024-05-18 08:29:47] 2024-05-18 06:29:33,960 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 08:29:47] 2024-05-18 06:29:33,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 08:29:47] 2024-05-18 06:29:33,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 08:29:47] 2024-05-18 06:29:34,074 | INFO     | [job] retrieve thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,196 | INFO     | [job] job monitor thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,213 | INFO     | [job] validate thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,279 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,289 | INFO     | [payload] control thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,318 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,527 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,535 | INFO     | [data] control thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,567 | INFO     | [data] copytool_in thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,592 | INFO     | [job] control thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:34,646 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:35,059 | INFO     | [payload] validate_post thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:35,075 | INFO     | [data] copytool_out thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:35,209 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 08:29:47] 2024-05-18 06:29:35,306 | INFO     | [payload] failed_post thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:36,214 | INFO     | [job] queue monitor thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:36,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 08:29:47] 2024-05-18 06:29:40,513 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 08:29:47] 2024-05-18 06:29:41,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46933208130624)>', '<ExcThread(monitor, started 46933379380992)>']
[2024-05-18 08:29:47] 2024-05-18 06:29:42,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 08:29:47] 2024-05-18 06:29:42,002 | INFO     | [monitor] control thread has ended
[2024-05-18 08:29:47] 2024-05-18 06:29:46,816 | INFO     | all workflow threads have been joined
[2024-05-18 08:29:47] 2024-05-18 06:29:46,816 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 08:29:47] 2024-05-18 06:29:46,816 | INFO     | traces error code: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:46,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 08:29:47] 2024-05-18 06:29:46,909 [wrapper] ==== pilot stdout END ====
[2024-05-18 08:29:47] 2024-05-18 06:29:46,912 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 08:29:47] 2024-05-18 06:29:46,914 [wrapper] pilotpid: 3256057
[2024-05-18 08:29:47] 2024-05-18 06:29:46,916 [wrapper] Pilot exit status: 0
[2024-05-18 08:29:47] 2024-05-18 06:29:46,926 [wrapper] pandaids: 6206146658
[2024-05-18 08:29:47] 2024-05-18 06:29:47,046 [wrapper] cleanup: SIGTERM to supervisor_pilot 3531038 3256058
[2024-05-18 08:29:47] 2024-05-18 06:29:47,049 [wrapper] Test setup, not cleaning
[2024-05-18 08:29:47] 2024-05-18 06:29:47,052 [wrapper] ==== wrapper stdout END ====
[2024-05-18 08:29:47] 2024-05-18 06:29:47,054 [wrapper] ==== wrapper stderr END ====
[2024-05-18 08:29:47] 2024-05-18 06:29:47,059 [wrapper] apfmon messages muted
[2024-05-18 08:29:47]  *** Error codes and diagnostics ***
[2024-05-18 08:29:47]     "exeErrorCode": 0,
[2024-05-18 08:29:47]     "exeErrorDiag": "",
[2024-05-18 08:29:47]     "pilotErrorCode": 0,
[2024-05-18 08:29:47]     "pilotErrorDiag": "",
[2024-05-18 08:29:47]  *** Listing of results directory ***
[2024-05-18 08:29:47] total 825228
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc    467845 May 14 15:14 pilot3.tar.gz
[2024-05-18 08:29:47] -rwx------ 1 boinc boinc     32251 May 14 15:17 runpilot2-wrapper.sh
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc      5633 May 14 15:17 queuedata.json
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc       100 May 18 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 08:29:47] -rwxr-xr-x 1 boinc boinc      7986 May 18 06:34 run_atlas
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc       105 May 18 06:34 job.xml
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc      6646 May 18 06:34 init_data.xml
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc 598251554 May 18 06:34 EVNT.38776119._000390.pool.root.1
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc     17537 May 18 06:34 start_atlas.sh
[2024-05-18 08:29:47] drwxrwx--x 2 boinc boinc      4096 May 18 06:34 shared
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc    480015 May 18 06:34 input.tar.gz
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc         0 May 18 06:34 boinc_lockfile
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc      2635 May 18 06:34 pandaJob.out
[2024-05-18 08:29:47] -rw------- 1 boinc boinc       424 May 18 06:34 setup.sh.local
[2024-05-18 08:29:47] -rw------- 1 boinc boinc   1019065 May 18 06:34 agis_schedconf.cvmfs.json
[2024-05-18 08:29:47] -rw------- 1 boinc boinc         0 May 18 06:34 agis_ddmendpoints.agis.ALL.json
[2024-05-18 08:29:47] -rw------- 1 boinc boinc   1324701 May 18 06:34 cric_ddmendpoints.json
[2024-05-18 08:29:47] drwx------ 4 boinc boinc      4096 May 18 06:34 pilot3
[2024-05-18 08:29:47] -rw------- 1 boinc boinc        95 May 18 08:28 pilot_heartbeat.json
[2024-05-18 08:29:47] -rw------- 1 boinc boinc 241295539 May 18 08:28 HITS.38776125._010449.pool.root.1
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc      8192 May 18 08:29 boinc_mmap_file
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc        27 May 18 08:29 wrapper_checkpoint.txt
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc       530 May 18 08:29 boinc_task_state.xml
[2024-05-18 08:29:47] -rw------- 1 boinc boinc      1042 May 18 08:29 memory_monitor_summary.json
[2024-05-18 08:29:47] -rw------- 1 boinc boinc    273454 May 18 08:29 log.38776125._010449.job.log.tgz.1
[2024-05-18 08:29:47] -rw------- 1 boinc boinc      7731 May 18 08:29 heartbeat.json
[2024-05-18 08:29:47] -rw------- 1 boinc boinc      4223 May 18 08:29 pilotlog.txt
[2024-05-18 08:29:47] -rw------- 1 boinc boinc    703961 May 18 08:29 log.38776125._010449.job.log.1
[2024-05-18 08:29:47] -rw------- 1 boinc boinc       357 May 18 08:29 output.list
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc       620 May 18 08:29 runtime_log
[2024-05-18 08:29:47] -rw------- 1 boinc boinc    993280 May 18 08:29 result.tar.gz
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc     11428 May 18 08:29 runtime_log.err
[2024-05-18 08:29:47] -rw------- 1 boinc boinc       656 May 18 08:29 LYzLDmoC7Q5n7Olcko1bjSoqABFKDmABFKDmOtvXDmMBYKDmByRu8m.diag
[2024-05-18 08:29:47] -rw-r--r-- 1 boinc boinc     21298 May 18 08:29 stderr.txt
[2024-05-18 08:29:47] HITS file was successfully produced:
[2024-05-18 08:29:47] -rw------- 1 boinc boinc 241295539 May 18 08:28 shared/HITS.pool.root.1
[2024-05-18 08:29:47]  *** Contents of shared directory: ***
[2024-05-18 08:29:47] total 821348
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc 598251554 May 18 06:34 ATLAS.root_0
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc     17537 May 18 06:34 start_atlas.sh
[2024-05-18 08:29:47] -rw-r--r-- 2 boinc boinc    480015 May 18 06:34 input.tar.gz
[2024-05-18 08:29:47] -rw------- 1 boinc boinc 241295539 May 18 08:28 HITS.pool.root.1
[2024-05-18 08:29:47] -rw------- 1 boinc boinc    993280 May 18 08:29 result.tar.gz
08:29:48 (3251371): run_atlas exited; CPU time 24771.923149
08:29:48 (3251371): called boinc_finish(0)

</stderr_txt>
]]>

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