Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:33:55 (1173008): wrapper (7.7.26015): starting
03:33:55 (1173008): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 03:33:55] Arguments: --nthreads 4
[2024-05-16 03:33:55] Threads: 4
[2024-05-16 03:33:55] Checking for CVMFS
[2024-05-16 03:33:55] No cvmfs_config command found, will try listing directly
[2024-05-16 03:33:55] CVMFS is ok
[2024-05-16 03:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 03:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 03:33:55] Further information can be found at the LHC@home message board.
[2024-05-16 03:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 03:33:55] Checking for apptainer binary...
[2024-05-16 03:33:55] which: no apptainer in ((null))
[2024-05-16 03:33:55] apptainer is not installed, using version from CVMFS
[2024-05-16 03:33:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 03:33:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-16 03:33:56] apptainer works
[2024-05-16 03:33:56] Set ATHENA_PROC_NUMBER=4
[2024-05-16 03:33:56] Set ATHENA_CORE_NUMBER=4
[2024-05-16 03:33:56] Starting ATLAS job with PandaID=6206146610
[2024-05-16 03:33:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 07:09:13]  *** The last 200 lines of the pilot log: ***
[2024-05-16 07:09:13] 2024-05-16 05:08:55,778 | WARNING  | GPU info not found in prmon json
[2024-05-16 07:09:13] 2024-05-16 05:08:55,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 07:09:13] 2024-05-16 05:08:55,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 07:09:13] 2024-05-16 05:08:55,782 | INFO     | fitting pss+swap vs Time
[2024-05-16 07:09:13] 2024-05-16 05:08:55,782 | INFO     | model: linear, x: [1715823284.0, 1715823345.0, 1715823406.0, 1715823467.0, 1715823528.0, 1715823589.0, 1715823650.0, 1715823711.0, 1715823772.0, 1715823833.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,783 | INFO     | sum of square deviations: 2912836010.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,784 | INFO     | sum of deviations: 84060112551.99998
[2024-05-16 07:09:13] 2024-05-16 05:08:55,784 | INFO     | mean x: 1715829689.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,784 | INFO     | mean y: 2274236.5734597156
[2024-05-16 07:09:13] 2024-05-16 05:08:55,784 | INFO     | -- intersect: -49514017199.758766
[2024-05-16 07:09:13] 2024-05-16 05:08:55,784 | INFO     | intersect: -49514017199.758766
[2024-05-16 07:09:13] 2024-05-16 05:08:55,785 | INFO     | chi2: 4.908156171194033
[2024-05-16 07:09:13] 2024-05-16 05:08:55,785 | INFO     | model: linear, x: [1715823284.0, 1715823345.0, 1715823406.0, 1715823467.0, 1715823528.0, 1715823589.0, 1715823650.0, 1715823711.0, 1715823772.0, 1715823833.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,785 | INFO     | sum of square deviations: 2710627567.5
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | sum of deviations: 95203236556.00002
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | mean x: 1715829536.5
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | mean y: 2282445.291262136
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | -- intersect: -60261446593.60459
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | intersect: -60261446593.60459
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | chi2: 4.115608338130825
[2024-05-16 07:09:13] 2024-05-16 05:08:55,787 | INFO     | current chi2=4.115608338130825 (change=16.14756754715083 %)
[2024-05-16 07:09:13] 2024-05-16 05:08:55,788 | INFO     | right removable region: 205
[2024-05-16 07:09:13] 2024-05-16 05:08:55,788 | INFO     | model: linear, x: [1715823589.0, 1715823650.0, 1715823711.0, 1715823772.0, 1715823833.0, 1715823894.0, 1715823955.0, 1715824016.0, 1715824077.0, 1715824138.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,788 | INFO     | sum of square deviations: 2710627567.5
[2024-05-16 07:09:13] 2024-05-16 05:08:55,789 | INFO     | sum of deviations: 35038388196.49999
[2024-05-16 07:09:13] 2024-05-16 05:08:55,789 | INFO     | mean x: 1715829841.5
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | mean y: 2311110.2669902914
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | -- intersect: -22177022113.686157
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | intersect: -22177022113.686157
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | chi2: 2.3929945630606437
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | current chi2=2.3929945630606437 (change=51.24453094819745 %)
[2024-05-16 07:09:13] 2024-05-16 05:08:55,790 | INFO     | model: linear, x: [1715823894.0, 1715823955.0, 1715824016.0, 1715824077.0, 1715824138.0, 1715824199.0, 1715824260.0, 1715824321.0, 1715824382.0, 1715824443.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,791 | INFO     | sum of square deviations: 2518000700.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,792 | INFO     | sum of deviations: -4628051883.000002
[2024-05-16 07:09:13] 2024-05-16 05:08:55,792 | INFO     | mean x: 1715829994.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,792 | INFO     | mean y: 2342518.3631840795
[2024-05-16 07:09:13] 2024-05-16 05:08:55,792 | INFO     | -- intersect: 3156015285.268921
[2024-05-16 07:09:13] 2024-05-16 05:08:55,792 | INFO     | intersect: 3156015285.268921
[2024-05-16 07:09:13] 2024-05-16 05:08:55,793 | INFO     | chi2: 0.886619789300638
[2024-05-16 07:09:13] 2024-05-16 05:08:55,793 | INFO     | current chi2=0.886619789300638 (change=62.94936047967239 %)
[2024-05-16 07:09:13] 2024-05-16 05:08:55,793 | INFO     | model: linear, x: [1715824199.0, 1715824260.0, 1715824321.0, 1715824382.0, 1715824443.0, 1715824504.0, 1715824565.0, 1715824626.0, 1715824687.0, 1715824748.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,793 | INFO     | sum of square deviations: 2334722845.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,794 | INFO     | sum of deviations: -9424648291.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,794 | INFO     | mean x: 1715830146.5
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | mean y: 2346451.56122449
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | -- intersect: 6928691346.197961
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | intersect: 6928691346.197961
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | chi2: 0.8338659436592405
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | current chi2=0.8338659436592405 (change=5.949996410863954 %)
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | left removable region: 30
[2024-05-16 07:09:13] 2024-05-16 05:08:55,795 | INFO     | model: linear, x: [1715825114.0, 1715825175.0, 1715825236.0, 1715825297.0, 1715825358.0, 1715825419.0, 1715825480.0, 1715825541.0, 1715825602.0, 1715825663.0, 1715
[2024-05-16 07:09:13] 2024-05-16 05:08:55,796 | INFO     | sum of square deviations: 1661798600.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | sum of deviations: 3662789896.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | mean x: 1715830421.0
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | mean y: 2356541.9371428574
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | -- intersect: -3779525528.0611267
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | intersect: -3779525528.0611267
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | chi2: 0.0004120538721697851
[2024-05-16 07:09:13] 2024-05-16 05:08:55,797 | INFO     | -- intersect: -3779525528.0611267
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | current memory leak: 2.20 B/s (using 175 data points, chi2=0.00)
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | ..............................
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | . Timing measurements:
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | . get job = 0 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | . initial setup = 1 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | . payload setup = 8 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,798 | INFO     | . stage-in = 0 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,799 | INFO     | . payload execution = 12841 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,799 | INFO     | . stage-out = 1 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,799 | INFO     | . log creation = 0 s
[2024-05-16 07:09:13] 2024-05-16 05:08:55,799 | INFO     | ..............................
[2024-05-16 07:09:13] 2024-05-16 05:08:56,279 | INFO     | 
[2024-05-16 07:09:13] 2024-05-16 05:08:56,280 | INFO     | job summary report
[2024-05-16 07:09:13] 2024-05-16 05:08:56,280 | INFO     | --------------------------------------------------
[2024-05-16 07:09:13] 2024-05-16 05:08:56,280 | INFO     | PanDA job id: 6206146610
[2024-05-16 07:09:13] 2024-05-16 05:08:56,280 | INFO     | task id: 38776125
[2024-05-16 07:09:13] 2024-05-16 05:08:56,280 | INFO     | errors: (none)
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | pilot state: finished 
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | transexitcode: 0
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | exeerrorcode: 0
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | exeerrordiag: 
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | exitcode: 0
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | exitmsg: OK
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | cpuconsumptiontime: 47684 s
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | nevents: 400
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | neventsw: 0
[2024-05-16 07:09:13] 2024-05-16 05:08:56,281 | INFO     | pid: 1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | pgrp: 1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | corecount: 4
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | event service: False
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | sizes: {0: 2392155, 8: 2392361, 11: 2392389, 12853: 2422054, 12854: 2431092, 12868: 2431206}
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | --------------------------------------------------
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | 
[2024-05-16 07:09:13] 2024-05-16 05:08:56,282 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,304 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,305 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,306 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 07:09:13] 2024-05-16 05:08:56,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,306 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 07:09:13] 2024-05-16 05:08:56,306 | INFO     | job 6206146610 has completed (purged errors)
[2024-05-16 07:09:13] 2024-05-16 05:08:56,306 | INFO     | overall cleanup function is called
[2024-05-16 07:09:13] 2024-05-16 05:08:57,313 | INFO     | --- collectZombieJob: --- 10, [1185359]
[2024-05-16 07:09:13] 2024-05-16 05:08:57,314 | INFO     | zombie collector waiting for pid 1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:57,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 07:09:13] 2024-05-16 05:08:58,319 | INFO     | collected zombie processes
[2024-05-16 07:09:13] 2024-05-16 05:08:58,319 | INFO     | will now attempt to kill all subprocesses of pid=1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:58,601 | INFO     | process IDs to be killed: [1185359] (in reverse order)
[2024-05-16 07:09:13] 2024-05-16 05:08:58,894 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 07:09:13] 2024-05-16 05:08:58,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 07:09:13] 2024-05-16 05:08:58,914 | INFO     | did not find any defunct processes belonging to 1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:58,929 | INFO     | did not find any defunct processes belonging to 1185359
[2024-05-16 07:09:13] 2024-05-16 05:08:58,930 | INFO     | ready for new job
[2024-05-16 07:09:13] 2024-05-16 05:08:58,930 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 07:09:13] 2024-05-16 05:08:58,932 | INFO     | *************************************
[2024-05-16 07:09:13] 2024-05-16 05:08:58,932 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 07:09:13] 2024-05-16 05:08:58,932 | INFO     | *************************************
[2024-05-16 07:09:13] 2024-05-16 05:08:58,932 | INFO     | 
[2024-05-16 07:09:13] 2024-05-16 05:08:58,939 | INFO     | architecture information:
[2024-05-16 07:09:13] 2024-05-16 05:08:58,939 | INFO     | executing command: cat /etc/os-release
[2024-05-16 07:09:13] 2024-05-16 05:08:58,991 | INFO     | cat /etc/os-release:
[2024-05-16 07:09:13] NAME="CentOS Linux"
[2024-05-16 07:09:13] VERSION="7 (Core)"
[2024-05-16 07:09:13] ID="centos"
[2024-05-16 07:09:13] ID_LIKE="rhel fedora"
[2024-05-16 07:09:13] VERSION_ID="7"
[2024-05-16 07:09:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 07:09:13] ANSI_COLOR="0;31"
[2024-05-16 07:09:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 07:09:13] HOME_URL="https://www.centos.org/"
[2024-05-16 07:09:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 07:09:13] 
[2024-05-16 07:09:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 07:09:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 07:09:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 07:09:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 07:09:13] 
[2024-05-16 07:09:13] 2024-05-16 05:08:58,992 | INFO     | *************************************
[2024-05-16 07:09:13] 2024-05-16 05:08:59,495 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-05-16 07:09:13] 2024-05-16 05:08:59,514 | INFO     | sufficient remaining disk space (3166588370944 B)
[2024-05-16 07:09:13] 2024-05-16 05:08:59,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 07:09:13] 2024-05-16 05:08:59,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 07:09:13] 2024-05-16 05:08:59,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 07:09:13] 2024-05-16 05:08:59,515 | INFO     | aborting loop
[2024-05-16 07:09:13] 2024-05-16 05:08:59,545 | INFO     | all payload control threads have been joined
[2024-05-16 07:09:13] 2024-05-16 05:09:00,369 | INFO     | all data control threads have been joined
[2024-05-16 07:09:13] 2024-05-16 05:09:00,420 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 07:09:13] 2024-05-16 05:09:00,455 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 07:09:13] 2024-05-16 05:09:00,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 07:09:13] 2024-05-16 05:09:00,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 07:09:13] 2024-05-16 05:09:00,520 | INFO     | [job] retrieve thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,521 | INFO     | [job] job monitor thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,551 | INFO     | [payload] control thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,607 | INFO     | [job] validate thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,811 | INFO     | [payload] failed_post thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,900 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:00,919 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 07:09:13] 2024-05-16 05:09:01,004 | INFO     | all job control threads have been joined
[2024-05-16 07:09:13] 2024-05-16 05:09:01,375 | INFO     | [data] control thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,403 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,430 | INFO     | [payload] validate_post thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,786 | INFO     | [data] copytool_in thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,809 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,901 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:01,924 | INFO     | [job] queue monitor thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:02,010 | INFO     | [job] control thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:02,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 07:09:13] 2024-05-16 05:09:02,426 | INFO     | [data] copytool_out thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:06,019 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 07:09:13] 2024-05-16 05:09:06,785 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46922007655488)>', '<ExcThread(monitor, started 46922178905856)>']
[2024-05-16 07:09:13] 2024-05-16 05:09:07,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 07:09:13] 2024-05-16 05:09:07,491 | INFO     | [monitor] control thread has ended
[2024-05-16 07:09:13] 2024-05-16 05:09:11,812 | INFO     | all workflow threads have been joined
[2024-05-16 07:09:13] 2024-05-16 05:09:11,813 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 07:09:13] 2024-05-16 05:09:11,813 | INFO     | traces error code: 0
[2024-05-16 07:09:13] 2024-05-16 05:09:11,813 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 07:09:13] 2024-05-16 05:09:12,024 [wrapper] ==== pilot stdout END ====
[2024-05-16 07:09:13] 2024-05-16 05:09:12,027 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 07:09:13] 2024-05-16 05:09:12,045 [wrapper] pilotpid: 1177752
[2024-05-16 07:09:13] 2024-05-16 05:09:12,069 [wrapper] Pilot exit status: 0
[2024-05-16 07:09:13] 2024-05-16 05:09:12,142 [wrapper] pandaids: 6206146610
[2024-05-16 07:09:13] 2024-05-16 05:09:12,272 [wrapper] cleanup: SIGTERM to supervisor_pilot 2249969 1177753
[2024-05-16 07:09:13] 2024-05-16 05:09:12,282 [wrapper] Test setup, not cleaning
[2024-05-16 07:09:13] 2024-05-16 05:09:12,292 [wrapper] ==== wrapper stdout END ====
[2024-05-16 07:09:13] 2024-05-16 05:09:12,312 [wrapper] ==== wrapper stderr END ====
[2024-05-16 07:09:13] 2024-05-16 05:09:12,335 [wrapper] apfmon messages muted
[2024-05-16 07:09:13]  *** Error codes and diagnostics ***
[2024-05-16 07:09:13]     "exeErrorCode": 0,
[2024-05-16 07:09:13]     "exeErrorDiag": "",
[2024-05-16 07:09:13]     "pilotErrorCode": 0,
[2024-05-16 07:09:13]     "pilotErrorDiag": "",
[2024-05-16 07:09:13]  *** Listing of results directory ***
[2024-05-16 07:09:13] total 824344
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc    467845 May 14 14:33 pilot3.tar.gz
[2024-05-16 07:09:13] -rwx------ 1 boinc boinc     32251 May 14 15:11 runpilot2-wrapper.sh
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc      5633 May 14 15:11 queuedata.json
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc       100 May 16 02:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 07:09:13] -rwxr-xr-x 1 boinc boinc      7986 May 16 02:52 run_atlas
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc       105 May 16 02:52 job.xml
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc      6643 May 16 03:33 init_data.xml
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc 597600520 May 16 03:33 EVNT.38776119._000388.pool.root.1
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc     17537 May 16 03:33 start_atlas.sh
[2024-05-16 07:09:13] drwxrwx--x 2 boinc boinc      4096 May 16 03:33 shared
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc    480010 May 16 03:33 input.tar.gz
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc         0 May 16 03:33 boinc_lockfile
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc      2633 May 16 03:33 pandaJob.out
[2024-05-16 07:09:13] -rw------- 1 boinc boinc       424 May 16 03:33 setup.sh.local
[2024-05-16 07:09:13] -rw------- 1 boinc boinc   1011355 May 16 03:34 agis_schedconf.cvmfs.json
[2024-05-16 07:09:13] -rw------- 1 boinc boinc   1324701 May 16 03:34 cric_ddmendpoints.json
[2024-05-16 07:09:13] drwx------ 4 boinc boinc      4096 May 16 03:34 pilot3
[2024-05-16 07:09:13] -rw------- 1 boinc boinc 239656847 May 16 07:08 HITS.38776125._010401.pool.root.1
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc       531 May 16 07:08 boinc_task_state.xml
[2024-05-16 07:09:13] -rw------- 1 boinc boinc      1039 May 16 07:08 memory_monitor_summary.json
[2024-05-16 07:09:13] -rw------- 1 boinc boinc         0 May 16 07:08 agis_ddmendpoints.agis.ALL.json
[2024-05-16 07:09:13] -rw------- 1 boinc boinc    340564 May 16 07:08 log.38776125._010401.job.log.tgz.1
[2024-05-16 07:09:13] -rw------- 1 boinc boinc      7713 May 16 07:08 heartbeat.json
[2024-05-16 07:09:13] -rw------- 1 boinc boinc        95 May 16 07:09 pilot_heartbeat.json
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc        28 May 16 07:09 wrapper_checkpoint.txt
[2024-05-16 07:09:13] -rw------- 1 boinc boinc      4222 May 16 07:09 pilotlog.txt
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc      8192 May 16 07:09 boinc_mmap_file
[2024-05-16 07:09:13] -rw------- 1 boinc boinc   1334421 May 16 07:09 log.38776125._010401.job.log.1
[2024-05-16 07:09:13] -rw------- 1 boinc boinc       357 May 16 07:09 output.list
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc       620 May 16 07:09 runtime_log
[2024-05-16 07:09:13] -rw------- 1 boinc boinc   1689600 May 16 07:09 result.tar.gz
[2024-05-16 07:09:13] -rw------- 1 boinc boinc       657 May 16 07:09 rzaKDmm76Q5n7Olcko1bjSoqABFKDmABFKDmOtvXDmsAYKDmWfN1mm.diag
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc     11410 May 16 07:09 runtime_log.err
[2024-05-16 07:09:13] -rw-r--r-- 1 boinc boinc     21262 May 16 07:09 stderr.txt
[2024-05-16 07:09:13] HITS file was successfully produced:
[2024-05-16 07:09:13] -rw------- 1 boinc boinc 239656847 May 16 07:08 shared/HITS.pool.root.1
[2024-05-16 07:09:13]  *** Contents of shared directory: ***
[2024-05-16 07:09:13] total 819788
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc 597600520 May 16 03:33 ATLAS.root_0
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc     17537 May 16 03:33 start_atlas.sh
[2024-05-16 07:09:13] -rw-r--r-- 2 boinc boinc    480010 May 16 03:33 input.tar.gz
[2024-05-16 07:09:13] -rw------- 1 boinc boinc 239656847 May 16 07:08 HITS.pool.root.1
[2024-05-16 07:09:13] -rw------- 1 boinc boinc   1689600 May 16 07:09 result.tar.gz
07:09:14 (1173008): run_atlas exited; CPU time 47378.960198
07:09:14 (1173008): called boinc_finish(0)

</stderr_txt>
]]>

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