Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:39 (467361): wrapper (7.7.26015): starting
10:39:39 (467361): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 10:39:39] Arguments: --nthreads 4
[2024-05-19 10:39:39] Threads: 4
[2024-05-19 10:39:39] Checking for CVMFS
[2024-05-19 10:39:39] No cvmfs_config command found, will try listing directly
[2024-05-19 10:39:39] CVMFS is ok
[2024-05-19 10:39:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 10:39:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 10:39:39] Further information can be found at the LHC@home message board.
[2024-05-19 10:39:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 10:39:39] Checking for apptainer binary...
[2024-05-19 10:39:39] which: no apptainer in ((null))
[2024-05-19 10:39:39] apptainer is not installed, using version from CVMFS
[2024-05-19 10:39:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 10:39:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-19 10:39:40] apptainer works
[2024-05-19 10:39:40] Set ATHENA_PROC_NUMBER=4
[2024-05-19 10:39:40] Set ATHENA_CORE_NUMBER=4
[2024-05-19 10:39:40] Starting ATLAS job with PandaID=6207269495
[2024-05-19 10:39:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:25:31]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:25:31] 2024-05-19 11:25:08,697 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 13:25:31] 2024-05-19 11:25:08,697 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 13:25:31] 2024-05-19 11:25:08,701 | INFO     | fitting pss+swap vs Time
[2024-05-19 13:25:31] 2024-05-19 11:25:08,702 | INFO     | model: linear, x: [1716108012.0, 1716108073.0, 1716108134.0, 1716108195.0, 1716108256.0, 1716108317.0, 1716108378.0, 1716108439.0, 1716108500.0, 1716108561.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,702 | INFO     | sum of square deviations: 1342841922.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,703 | INFO     | sum of deviations: 57512148648.99999
[2024-05-19 13:25:31] 2024-05-19 11:25:08,703 | INFO     | mean x: 1716112953.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,704 | INFO     | mean y: 2223860.2576687117
[2024-05-19 13:25:31] 2024-05-19 11:25:08,704 | INFO     | -- intersect: -73496630796.00195
[2024-05-19 13:25:31] 2024-05-19 11:25:08,704 | INFO     | intersect: -73496630796.00195
[2024-05-19 13:25:31] 2024-05-19 11:25:08,704 | INFO     | chi2: 4.855387542266306
[2024-05-19 13:25:31] 2024-05-19 11:25:08,705 | INFO     | model: linear, x: [1716108012.0, 1716108073.0, 1716108134.0, 1716108195.0, 1716108256.0, 1716108317.0, 1716108378.0, 1716108439.0, 1716108500.0, 1716108561.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,705 | INFO     | sum of square deviations: 1223016419.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,706 | INFO     | sum of deviations: 65403316750.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,706 | INFO     | mean x: 1716112800.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,706 | INFO     | mean y: 2233589.2721518986
[2024-05-19 13:25:31] 2024-05-19 11:25:08,706 | INFO     | -- intersect: -91770425617.1966
[2024-05-19 13:25:31] 2024-05-19 11:25:08,707 | INFO     | intersect: -91770425617.1966
[2024-05-19 13:25:31] 2024-05-19 11:25:08,707 | INFO     | chi2: 4.110861412405989
[2024-05-19 13:25:31] 2024-05-19 11:25:08,707 | INFO     | current chi2=4.110861412405989 (change=15.334020680722036 %)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,707 | INFO     | right removable region: 157
[2024-05-19 13:25:31] 2024-05-19 11:25:08,707 | INFO     | model: linear, x: [1716108317.0, 1716108378.0, 1716108439.0, 1716108500.0, 1716108561.0, 1716108622.0, 1716108683.0, 1716108744.0, 1716108805.0, 1716108866.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,708 | INFO     | sum of square deviations: 1223016419.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,709 | INFO     | sum of deviations: 20795407154.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,709 | INFO     | mean x: 1716113105.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,709 | INFO     | mean y: 2270429.0379746836
[2024-05-19 13:25:31] 2024-05-19 11:25:08,709 | INFO     | -- intersect: -29177444726.199036
[2024-05-19 13:25:31] 2024-05-19 11:25:08,709 | INFO     | intersect: -29177444726.199036
[2024-05-19 13:25:31] 2024-05-19 11:25:08,710 | INFO     | chi2: 2.3294792486733673
[2024-05-19 13:25:31] 2024-05-19 11:25:08,710 | INFO     | current chi2=2.3294792486733673 (change=52.02279471215891 %)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,710 | INFO     | model: linear, x: [1716108622.0, 1716108683.0, 1716108744.0, 1716108805.0, 1716108866.0, 1716108927.0, 1716108988.0, 1716109049.0, 1716109110.0, 1716109171.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,710 | INFO     | sum of square deviations: 1110539892.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,711 | INFO     | sum of deviations: -8683666407.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,711 | INFO     | mean x: 1716113258.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,711 | INFO     | mean y: 2310406.3006535945
[2024-05-19 13:25:31] 2024-05-19 11:25:08,712 | INFO     | -- intersect: 13421148537.60294
[2024-05-19 13:25:31] 2024-05-19 11:25:08,712 | INFO     | intersect: 13421148537.60294
[2024-05-19 13:25:31] 2024-05-19 11:25:08,712 | INFO     | chi2: 0.8341865369734821
[2024-05-19 13:25:31] 2024-05-19 11:25:08,712 | INFO     | current chi2=0.8341865369734821 (change=64.18999922628419 %)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,712 | INFO     | model: linear, x: [1716108927.0, 1716108988.0, 1716109049.0, 1716109110.0, 1716109171.0, 1716109232.0, 1716109293.0, 1716109354.0, 1716109415.0, 1716109476.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,713 | INFO     | sum of square deviations: 1005179777.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | sum of deviations: -11224555100.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | mean x: 1716113410.5
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | mean y: 2313986.6486486485
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | -- intersect: 19165661653.16877
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | intersect: 19165661653.16877
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | chi2: 0.7893819127690889
[2024-05-19 13:25:31] 2024-05-19 11:25:08,714 | INFO     | current chi2=0.7893819127690889 (change=5.371055779316363 %)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,715 | INFO     | left removable region: 30
[2024-05-19 13:25:31] 2024-05-19 11:25:08,715 | INFO     | model: linear, x: [1716109842.0, 1716109903.0, 1716109964.0, 1716110025.0, 1716110086.0, 1716110147.0, 1716110208.0, 1716110269.0, 1716110330.0, 1716110391.0, 1716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,715 | INFO     | sum of square deviations: 635130048.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,716 | INFO     | sum of deviations: -81126889.00000003
[2024-05-19 13:25:31] 2024-05-19 11:25:08,716 | INFO     | mean x: 1716113685.0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,716 | INFO     | mean y: 2324381.3858267716
[2024-05-19 13:25:31] 2024-05-19 11:25:08,716 | INFO     | -- intersect: 221528251.32204494
[2024-05-19 13:25:31] 2024-05-19 11:25:08,716 | INFO     | intersect: 221528251.32204494
[2024-05-19 13:25:31] 2024-05-19 11:25:08,717 | INFO     | chi2: 0.0008494275702295123
[2024-05-19 13:25:31] 2024-05-19 11:25:08,717 | INFO     | -- intersect: 221528251.32204494
[2024-05-19 13:25:31] 2024-05-19 11:25:08,717 | INFO     | current memory leak: -0.13 B/s (using 127 data points, chi2=0.00)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,717 | INFO     | ..............................
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . Timing measurements:
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . get job = 0 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . initial setup = 1 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . payload setup = 4 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . stage-in = 0 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . payload execution = 9890 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . stage-out = 0 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | . log creation = 0 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,718 | INFO     | ..............................
[2024-05-19 13:25:31] 2024-05-19 11:25:08,843 | INFO     | 
[2024-05-19 13:25:31] 2024-05-19 11:25:08,843 | INFO     | job summary report
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | --------------------------------------------------
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | PanDA job id: 6207269495
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | task id: 38207159
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | errors: (none)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | pilot state: finished 
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | transexitcode: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | exeerrorcode: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | exeerrordiag: 
[2024-05-19 13:25:31] 2024-05-19 11:25:08,844 | INFO     | exitcode: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | exitmsg: OK
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | cpuconsumptiontime: 36950 s
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | nevents: 400
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | neventsw: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | pid: 478949
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | pgrp: 478949
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | corecount: 4
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | event service: False
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | sizes: {0: 2392226, 3: 2392432, 11: 2392460, 9898: 2421017, 9899: 2429999, 9900: 2430055, 9906: 2430353}
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | --------------------------------------------------
[2024-05-19 13:25:31] 2024-05-19 11:25:08,845 | INFO     | 
[2024-05-19 13:25:31] 2024-05-19 11:25:08,846 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-19 13:25:31] 2024-05-19 11:25:08,870 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | job 6207269495 has completed (purged errors)
[2024-05-19 13:25:31] 2024-05-19 11:25:08,872 | INFO     | overall cleanup function is called
[2024-05-19 13:25:31] 2024-05-19 11:25:09,880 | INFO     | --- collectZombieJob: --- 10, [478949]
[2024-05-19 13:25:31] 2024-05-19 11:25:09,880 | INFO     | zombie collector waiting for pid 478949
[2024-05-19 13:25:31] 2024-05-19 11:25:09,880 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:25:31] 2024-05-19 11:25:10,885 | INFO     | collected zombie processes
[2024-05-19 13:25:31] 2024-05-19 11:25:10,886 | INFO     | will now attempt to kill all subprocesses of pid=478949
[2024-05-19 13:25:31] 2024-05-19 11:25:11,030 | INFO     | process IDs to be killed: [478949] (in reverse order)
[2024-05-19 13:25:31] 2024-05-19 11:25:11,135 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:25:31] 2024-05-19 11:25:11,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:25:31] 2024-05-19 11:25:11,146 | INFO     | did not find any defunct processes belonging to 478949
[2024-05-19 13:25:31] 2024-05-19 11:25:11,156 | INFO     | did not find any defunct processes belonging to 478949
[2024-05-19 13:25:31] 2024-05-19 11:25:11,156 | INFO     | ready for new job
[2024-05-19 13:25:31] 2024-05-19 11:25:11,156 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:25:31] 2024-05-19 11:25:11,158 | INFO     | *************************************
[2024-05-19 13:25:31] 2024-05-19 11:25:11,158 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:25:31] 2024-05-19 11:25:11,158 | INFO     | *************************************
[2024-05-19 13:25:31] 2024-05-19 11:25:11,158 | INFO     | 
[2024-05-19 13:25:31] 2024-05-19 11:25:11,162 | INFO     | architecture information:
[2024-05-19 13:25:31] 2024-05-19 11:25:11,163 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:25:31] 2024-05-19 11:25:11,177 | INFO     | cat /etc/os-release:
[2024-05-19 13:25:31] NAME="CentOS Linux"
[2024-05-19 13:25:31] VERSION="7 (Core)"
[2024-05-19 13:25:31] ID="centos"
[2024-05-19 13:25:31] ID_LIKE="rhel fedora"
[2024-05-19 13:25:31] VERSION_ID="7"
[2024-05-19 13:25:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:25:31] ANSI_COLOR="0;31"
[2024-05-19 13:25:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:25:31] HOME_URL="https://www.centos.org/"
[2024-05-19 13:25:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:25:31] 
[2024-05-19 13:25:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:25:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:25:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:25:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:25:31] 
[2024-05-19 13:25:31] 2024-05-19 11:25:11,178 | INFO     | *************************************
[2024-05-19 13:25:31] 2024-05-19 11:25:11,681 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-19 13:25:31] 2024-05-19 11:25:11,699 | INFO     | sufficient remaining disk space (577084850176 B)
[2024-05-19 13:25:31] 2024-05-19 11:25:11,699 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:25:31] 2024-05-19 11:25:11,699 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:25:31] 2024-05-19 11:25:11,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:25:31] 2024-05-19 11:25:11,699 | INFO     | aborting loop
[2024-05-19 13:25:31] 2024-05-19 11:25:11,828 | INFO     | all data control threads have been joined
[2024-05-19 13:25:31] 2024-05-19 11:25:12,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:25:31] 2024-05-19 11:25:12,554 | INFO     | all job control threads have been joined
[2024-05-19 13:25:31] 2024-05-19 11:25:12,563 | INFO     | all payload control threads have been joined
[2024-05-19 13:25:31] 2024-05-19 11:25:12,578 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:25:31] 2024-05-19 11:25:12,579 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:25:31] 2024-05-19 11:25:12,579 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:25:31] 2024-05-19 11:25:12,704 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:12,705 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:12,833 | INFO     | [data] control thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:12,915 | INFO     | [job] validate thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:12,916 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:12,937 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,182 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,559 | INFO     | [job] control thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,569 | INFO     | [payload] control thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,643 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:25:31] 2024-05-19 11:25:13,652 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:13,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:25:31] 2024-05-19 11:25:13,933 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:14,145 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:14,816 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:17,654 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:22,251 | INFO     | job.realtimelogging is not enabled
[2024-05-19 13:25:31] 2024-05-19 11:25:23,256 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:25:31] 2024-05-19 11:25:25,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47215530722368)>', '<ExcThread(monitor, started 47215701972736)>']
[2024-05-19 13:25:31] 2024-05-19 11:25:25,643 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:25:31] 2024-05-19 11:25:25,643 | INFO     | [monitor] control thread has ended
[2024-05-19 13:25:31] 2024-05-19 11:25:30,162 | INFO     | all workflow threads have been joined
[2024-05-19 13:25:31] 2024-05-19 11:25:30,162 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:25:31] 2024-05-19 11:25:30,162 | INFO     | traces error code: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:30,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:25:31] 2024-05-19 11:25:30,251 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:25:31] 2024-05-19 11:25:30,253 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:25:31] 2024-05-19 11:25:30,255 [wrapper] pilotpid: 471700
[2024-05-19 13:25:31] 2024-05-19 11:25:30,257 [wrapper] Pilot exit status: 0
[2024-05-19 13:25:31] 2024-05-19 11:25:30,265 [wrapper] pandaids: 6207269495
[2024-05-19 13:25:31] 2024-05-19 11:25:30,335 [wrapper] cleanup: SIGTERM to supervisor_pilot  802232 471701
[2024-05-19 13:25:31] 2024-05-19 11:25:30,337 [wrapper] Test setup, not cleaning
[2024-05-19 13:25:31] 2024-05-19 11:25:30,340 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:25:31] 2024-05-19 11:25:30,342 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:25:31] 2024-05-19 11:25:30,346 [wrapper] apfmon messages muted
[2024-05-19 13:25:31]  *** Error codes and diagnostics ***
[2024-05-19 13:25:31]     "exeErrorCode": 0,
[2024-05-19 13:25:31]     "exeErrorDiag": "",
[2024-05-19 13:25:31]     "pilotErrorCode": 0,
[2024-05-19 13:25:31]     "pilotErrorDiag": "",
[2024-05-19 13:25:31]  *** Listing of results directory ***
[2024-05-19 13:25:31] total 1096120
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc    467845 May 14 14:01 pilot3.tar.gz
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc      5633 May 14 14:05 queuedata.json
[2024-05-19 13:25:31] -rwx------ 1 boinc boinc     32251 May 14 14:07 runpilot2-wrapper.sh
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc       100 May 19 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:25:31] -rwxr-xr-x 1 boinc boinc      7986 May 19 04:06 run_atlas
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc       105 May 19 04:06 job.xml
[2024-05-19 13:25:31] -rw------- 2 boinc boinc 404488192 May 19 04:58 copy_wjGliG
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc      6662 May 19 10:39 init_data.xml
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc 519378893 May 19 10:39 EVNT.38207157._000266.pool.root.1
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc     17537 May 19 10:39 start_atlas.sh
[2024-05-19 13:25:31] drwxrwx--x 2 boinc boinc      4096 May 19 10:39 shared
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc    480033 May 19 10:39 input.tar.gz
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc         0 May 19 10:39 boinc_lockfile
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc      2650 May 19 10:39 pandaJob.out
[2024-05-19 13:25:31] -rw------- 1 boinc boinc       424 May 19 10:39 setup.sh.local
[2024-05-19 13:25:31] -rw------- 1 boinc boinc   1014045 May 19 10:39 agis_schedconf.cvmfs.json
[2024-05-19 13:25:31] -rw------- 1 boinc boinc         0 May 19 10:39 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:25:31] -rw------- 1 boinc boinc   1324701 May 19 10:39 cric_ddmendpoints.json
[2024-05-19 13:25:31] drwx------ 4 boinc boinc      4096 May 19 10:39 pilot3
[2024-05-19 13:25:31] -rw------- 1 boinc boinc        95 May 19 13:24 pilot_heartbeat.json
[2024-05-19 13:25:31] -rw------- 1 boinc boinc 192366281 May 19 13:24 HITS.38207159._012891.pool.root.1
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc       531 May 19 13:24 boinc_task_state.xml
[2024-05-19 13:25:31] -rw------- 1 boinc boinc      1050 May 19 13:24 memory_monitor_summary.json
[2024-05-19 13:25:31] -rw------- 1 boinc boinc    296763 May 19 13:25 log.38207159._012891.job.log.tgz.1
[2024-05-19 13:25:31] -rw------- 1 boinc boinc      7759 May 19 13:25 heartbeat.json
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc        27 May 19 13:25 wrapper_checkpoint.txt
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc      8192 May 19 13:25 boinc_mmap_file
[2024-05-19 13:25:31] -rw------- 1 boinc boinc      4293 May 19 13:25 pilotlog.txt
[2024-05-19 13:25:31] -rw------- 1 boinc boinc   1032065 May 19 13:25 log.38207159._012891.job.log.1
[2024-05-19 13:25:31] -rw------- 1 boinc boinc       357 May 19 13:25 output.list
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc       620 May 19 13:25 runtime_log
[2024-05-19 13:25:31] -rw------- 1 boinc boinc   1351680 May 19 13:25 result.tar.gz
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc     11409 May 19 13:25 runtime_log.err
[2024-05-19 13:25:31] -rw------- 1 boinc boinc       656 May 19 13:25 fNDMDmA75Q5n7Olcko1bjSoqABFKDmABFKDmOtvXDmS7XKDm4FnpIm.diag
[2024-05-19 13:25:31] -rw-r--r-- 1 boinc boinc     21255 May 19 13:25 stderr.txt
[2024-05-19 13:25:31] HITS file was successfully produced:
[2024-05-19 13:25:31] -rw------- 1 boinc boinc 192366281 May 19 13:24 shared/HITS.pool.root.1
[2024-05-19 13:25:31]  *** Contents of shared directory: ***
[2024-05-19 13:25:31] total 1091900
[2024-05-19 13:25:31] -rw------- 2 boinc boinc 404488192 May 19 04:58 copy_wjGliG
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc 519378893 May 19 10:39 ATLAS.root_0
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc     17537 May 19 10:39 start_atlas.sh
[2024-05-19 13:25:31] -rw-r--r-- 2 boinc boinc    480033 May 19 10:39 input.tar.gz
[2024-05-19 13:25:31] -rw------- 1 boinc boinc 192366281 May 19 13:24 HITS.pool.root.1
[2024-05-19 13:25:31] -rw------- 1 boinc boinc   1351680 May 19 13:25 result.tar.gz
13:25:32 (467361): run_atlas exited; CPU time 36721.432505
13:25:32 (467361): called boinc_finish(0)

</stderr_txt>
]]>

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