Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:59:07 (66905): wrapper (7.7.26015): starting
21:59:07 (66905): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 21:59:07] Arguments: --nthreads 4
[2024-05-16 21:59:07] Threads: 4
[2024-05-16 21:59:07] Checking for CVMFS
[2024-05-16 21:59:07] No cvmfs_config command found, will try listing directly
[2024-05-16 21:59:07] CVMFS is ok
[2024-05-16 21:59:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 21:59:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 21:59:07] Further information can be found at the LHC@home message board.
[2024-05-16 21:59:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 21:59:07] Checking for apptainer binary...
[2024-05-16 21:59:07] which: no apptainer in ((null))
[2024-05-16 21:59:07] apptainer is not installed, using version from CVMFS
[2024-05-16 21:59:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 21:59:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-16 21:59:08] apptainer works
[2024-05-16 21:59:08] Set ATHENA_PROC_NUMBER=4
[2024-05-16 21:59:08] Set ATHENA_CORE_NUMBER=4
[2024-05-16 21:59:08] Starting ATLAS job with PandaID=6206085561
[2024-05-16 21:59:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 00:27:45]  *** The last 200 lines of the pilot log: ***
[2024-05-17 00:27:45] 2024-05-16 22:27:24,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 00:27:45] 2024-05-16 22:27:24,124 | INFO     | fitting pss+swap vs Time
[2024-05-17 00:27:45] 2024-05-16 22:27:24,124 | INFO     | model: linear, x: [1715889585.0, 1715889646.0, 1715889707.0, 1715889768.0, 1715889829.0, 1715889890.0, 1715889951.0, 1715890012.0, 1715890073.0, 1715890134.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,124 | INFO     | sum of square deviations: 964976232.5
[2024-05-17 00:27:45] 2024-05-16 22:27:24,126 | INFO     | sum of deviations: 58542221550.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,126 | INFO     | mean x: 1715894007.5
[2024-05-17 00:27:45] 2024-05-16 22:27:24,126 | INFO     | mean y: 2214992.095890411
[2024-05-17 00:27:45] 2024-05-16 22:27:24,126 | INFO     | -- intersect: -104095941791.65926
[2024-05-17 00:27:45] 2024-05-16 22:27:24,126 | INFO     | intersect: -104095941791.65926
[2024-05-17 00:27:45] 2024-05-16 22:27:24,127 | INFO     | chi2: 4.952768614935103
[2024-05-17 00:27:45] 2024-05-16 22:27:24,127 | INFO     | model: linear, x: [1715889585.0, 1715889646.0, 1715889707.0, 1715889768.0, 1715889829.0, 1715889890.0, 1715889951.0, 1715890012.0, 1715890073.0, 1715890134.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,127 | INFO     | sum of square deviations: 869188390.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,128 | INFO     | sum of deviations: 65264504388.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,128 | INFO     | mean x: 1715893855.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | mean y: 2225288.780141844
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | -- intersect: -128838614415.70526
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | intersect: -128838614415.70526
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | chi2: 4.161457296560227
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | current chi2=4.161457296560227 (change=15.97715096135669 %)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,129 | INFO     | right removable region: 140
[2024-05-17 00:27:45] 2024-05-16 22:27:24,130 | INFO     | model: linear, x: [1715889890.0, 1715889951.0, 1715890012.0, 1715890073.0, 1715890134.0, 1715890195.0, 1715890256.0, 1715890317.0, 1715890378.0, 1715890439.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,130 | INFO     | sum of square deviations: 869188390.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,131 | INFO     | sum of deviations: 25271909600.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,131 | INFO     | mean x: 1715894160.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,131 | INFO     | mean y: 2267762.070921986
[2024-05-17 00:27:45] 2024-05-16 22:27:24,131 | INFO     | -- intersect: -49887862609.651985
[2024-05-17 00:27:45] 2024-05-16 22:27:24,132 | INFO     | intersect: -49887862609.651985
[2024-05-17 00:27:45] 2024-05-16 22:27:24,132 | INFO     | chi2: 2.399369856735934
[2024-05-17 00:27:45] 2024-05-16 22:27:24,132 | INFO     | current chi2=2.399369856735934 (change=51.554977765352895 %)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,132 | INFO     | model: linear, x: [1715890195.0, 1715890256.0, 1715890317.0, 1715890378.0, 1715890439.0, 1715890500.0, 1715890561.0, 1715890622.0, 1715890683.0, 1715890744.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,132 | INFO     | sum of square deviations: 779958810.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,133 | INFO     | sum of deviations: -1374946161.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,133 | INFO     | mean x: 1715894312.5
[2024-05-17 00:27:45] 2024-05-16 22:27:24,133 | INFO     | mean y: 2313316.632352941
[2024-05-17 00:27:45] 2024-05-16 22:27:24,133 | INFO     | -- intersect: 3027168305.6459513
[2024-05-17 00:27:45] 2024-05-16 22:27:24,133 | INFO     | intersect: 3027168305.6459513
[2024-05-17 00:27:45] 2024-05-16 22:27:24,134 | INFO     | chi2: 0.8995941514885801
[2024-05-17 00:27:45] 2024-05-16 22:27:24,134 | INFO     | current chi2=0.8995941514885801 (change=62.507066221446394 %)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,134 | INFO     | model: linear, x: [1715890500.0, 1715890561.0, 1715890622.0, 1715890683.0, 1715890744.0, 1715890805.0, 1715890866.0, 1715890927.0, 1715890988.0, 1715891049.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,134 | INFO     | sum of square deviations: 697054930.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | sum of deviations: -5159822189.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | mean x: 1715894465.0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | mean y: 2320131.4045801526
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | -- intersect: 12703916452.499798
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | intersect: 12703916452.499798
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | chi2: 0.8290502230770098
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | current chi2=0.8290502230770098 (change=7.841750448781773 %)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | left removable region: 30
[2024-05-17 00:27:45] 2024-05-16 22:27:24,135 | INFO     | model: linear, x: [1715891415.0, 1715891476.0, 1715891537.0, 1715891598.0, 1715891659.0, 1715891720.0, 1715891781.0, 1715891842.0, 1715891903.0, 1715891964.0, 1715
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | sum of square deviations: 412686807.5
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | sum of deviations: 1485404717.0000002
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | mean x: 1715894739.5
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | mean y: 2339207.8181818184
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | -- intersect: -6173768420.552726
[2024-05-17 00:27:45] 2024-05-16 22:27:24,136 | INFO     | intersect: -6173768420.552726
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | chi2: 0.00022669807489245124
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | -- intersect: -6173768420.552726
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | current memory leak: 3.60 B/s (using 110 data points, chi2=0.00)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | ..............................
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | . Timing measurements:
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | . get job = 0 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,137 | INFO     | . initial setup = 1 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | . payload setup = 5 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | . stage-in = 0 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | . payload execution = 8854 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | . stage-out = 0 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | . log creation = 0 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,138 | INFO     | ..............................
[2024-05-17 00:27:45] 2024-05-16 22:27:24,209 | INFO     | 
[2024-05-17 00:27:45] 2024-05-16 22:27:24,209 | INFO     | job summary report
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | --------------------------------------------------
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | PanDA job id: 6206085561
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | task id: 38776104
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | errors: (none)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | pilot state: finished 
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | transexitcode: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | exeerrorcode: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | exeerrordiag: 
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | exitcode: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | exitmsg: OK
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | cpuconsumptiontime: 32601 s
[2024-05-17 00:27:45] 2024-05-16 22:27:24,210 | INFO     | nevents: 400
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | neventsw: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | pid: 79047
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | pgrp: 79047
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | corecount: 4
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | event service: False
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | sizes: {0: 2392159, 5: 2392365, 11: 2392421, 8863: 2420509, 8864: 2429493, 8865: 2429549, 8869: 2429847}
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | --------------------------------------------------
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | 
[2024-05-17 00:27:45] 2024-05-16 22:27:24,211 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/1
[2024-05-17 00:27:45] 2024-05-16 22:27:24,228 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | job 6206085561 has completed (purged errors)
[2024-05-17 00:27:45] 2024-05-16 22:27:24,230 | INFO     | overall cleanup function is called
[2024-05-17 00:27:45] 2024-05-16 22:27:25,237 | INFO     | --- collectZombieJob: --- 10, [79047]
[2024-05-17 00:27:45] 2024-05-16 22:27:25,237 | INFO     | zombie collector waiting for pid 79047
[2024-05-17 00:27:45] 2024-05-16 22:27:25,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 00:27:45] 2024-05-16 22:27:26,242 | INFO     | collected zombie processes
[2024-05-17 00:27:45] 2024-05-16 22:27:26,242 | INFO     | will now attempt to kill all subprocesses of pid=79047
[2024-05-17 00:27:45] 2024-05-16 22:27:26,428 | INFO     | process IDs to be killed: [79047] (in reverse order)
[2024-05-17 00:27:45] 2024-05-16 22:27:26,581 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 00:27:45] 2024-05-16 22:27:26,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 00:27:45] 2024-05-16 22:27:26,599 | INFO     | did not find any defunct processes belonging to 79047
[2024-05-17 00:27:45] 2024-05-16 22:27:26,608 | INFO     | did not find any defunct processes belonging to 79047
[2024-05-17 00:27:45] 2024-05-16 22:27:26,608 | INFO     | ready for new job
[2024-05-17 00:27:45] 2024-05-16 22:27:26,608 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 00:27:45] 2024-05-16 22:27:26,609 | INFO     | *************************************
[2024-05-17 00:27:45] 2024-05-16 22:27:26,609 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 00:27:45] 2024-05-16 22:27:26,609 | INFO     | *************************************
[2024-05-17 00:27:45] 2024-05-16 22:27:26,609 | INFO     | 
[2024-05-17 00:27:45] 2024-05-16 22:27:26,614 | INFO     | architecture information:
[2024-05-17 00:27:45] 2024-05-16 22:27:26,614 | INFO     | executing command: cat /etc/os-release
[2024-05-17 00:27:45] 2024-05-16 22:27:26,628 | INFO     | cat /etc/os-release:
[2024-05-17 00:27:45] NAME="CentOS Linux"
[2024-05-17 00:27:45] VERSION="7 (Core)"
[2024-05-17 00:27:45] ID="centos"
[2024-05-17 00:27:45] ID_LIKE="rhel fedora"
[2024-05-17 00:27:45] VERSION_ID="7"
[2024-05-17 00:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 00:27:45] ANSI_COLOR="0;31"
[2024-05-17 00:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 00:27:45] HOME_URL="https://www.centos.org/"
[2024-05-17 00:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 00:27:45] 
[2024-05-17 00:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 00:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 00:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 00:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 00:27:45] 
[2024-05-17 00:27:45] 2024-05-16 22:27:26,628 | INFO     | *************************************
[2024-05-17 00:27:45] 2024-05-16 22:27:27,131 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/1
[2024-05-17 00:27:45] 2024-05-16 22:27:27,146 | INFO     | sufficient remaining disk space (2986263707648 B)
[2024-05-17 00:27:45] 2024-05-16 22:27:27,147 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 00:27:45] 2024-05-16 22:27:27,147 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 00:27:45] 2024-05-16 22:27:27,147 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 00:27:45] 2024-05-16 22:27:27,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 00:27:45] 2024-05-16 22:27:27,148 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 00:27:45] 2024-05-16 22:27:27,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 00:27:45] 2024-05-16 22:27:27,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 00:27:45] 2024-05-16 22:27:27,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 00:27:45] 2024-05-16 22:27:27,325 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 00:27:45] 2024-05-16 22:27:27,325 | INFO     | aborting loop
[2024-05-17 00:27:45] 2024-05-16 22:27:27,528 | INFO     | all job control threads have been joined
[2024-05-17 00:27:45] 2024-05-16 22:27:27,612 | INFO     | all data control threads have been joined
[2024-05-17 00:27:45] 2024-05-16 22:27:28,134 | INFO     | all payload control threads have been joined
[2024-05-17 00:27:45] 2024-05-16 22:27:28,152 | INFO     | [job] retrieve thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,205 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,278 | INFO     | [payload] failed_post thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,331 | INFO     | [job] job monitor thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,394 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,534 | INFO     | [job] control thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,617 | INFO     | [data] control thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:28,870 | INFO     | [payload] validate_post thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:29,061 | INFO     | [job] validate thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:29,140 | INFO     | [payload] control thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:29,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 00:27:45] 2024-05-16 22:27:29,248 | INFO     | [data] copytool_out thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:29,260 | INFO     | [data] copytool_in thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:29,476 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:30,225 | INFO     | [job] queue monitor thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:31,154 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:37,516 | INFO     | job.realtimelogging is not enabled
[2024-05-17 00:27:45] 2024-05-16 22:27:38,520 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 00:27:45] 2024-05-16 22:27:39,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47637240149056)>', '<ExcThread(monitor, started 47637411399424)>']
[2024-05-17 00:27:45] 2024-05-16 22:27:40,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 00:27:45] 2024-05-16 22:27:40,212 | INFO     | [monitor] control thread has ended
[2024-05-17 00:27:45] 2024-05-16 22:27:44,830 | INFO     | all workflow threads have been joined
[2024-05-17 00:27:45] 2024-05-16 22:27:44,830 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 00:27:45] 2024-05-16 22:27:44,830 | INFO     | traces error code: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:44,830 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 00:27:45] 2024-05-16 22:27:44,917 [wrapper] ==== pilot stdout END ====
[2024-05-17 00:27:45] 2024-05-16 22:27:44,920 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 00:27:45] 2024-05-16 22:27:44,922 [wrapper] pilotpid: 71541
[2024-05-17 00:27:45] 2024-05-16 22:27:44,924 [wrapper] Pilot exit status: 0
[2024-05-17 00:27:45] 2024-05-16 22:27:44,933 [wrapper] pandaids: 6206085561
[2024-05-17 00:27:45] 2024-05-16 22:27:45,028 [wrapper] cleanup: SIGTERM to supervisor_pilot  762901 71542
[2024-05-17 00:27:45] 2024-05-16 22:27:45,031 [wrapper] Test setup, not cleaning
[2024-05-17 00:27:45] 2024-05-16 22:27:45,033 [wrapper] ==== wrapper stdout END ====
[2024-05-17 00:27:45] 2024-05-16 22:27:45,035 [wrapper] ==== wrapper stderr END ====
[2024-05-17 00:27:45] 2024-05-16 22:27:45,040 [wrapper] apfmon messages muted
[2024-05-17 00:27:45]  *** Error codes and diagnostics ***
[2024-05-17 00:27:45]     "exeErrorCode": 0,
[2024-05-17 00:27:45]     "exeErrorDiag": "",
[2024-05-17 00:27:45]     "pilotErrorCode": 0,
[2024-05-17 00:27:45]     "pilotErrorDiag": "",
[2024-05-17 00:27:45]  *** Listing of results directory ***
[2024-05-17 00:27:45] total 820192
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc    467845 May 14 12:33 pilot3.tar.gz
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc      5633 May 14 12:41 queuedata.json
[2024-05-17 00:27:45] -rwx------ 1 boinc boinc     32251 May 14 12:44 runpilot2-wrapper.sh
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc       100 May 16 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 00:27:45] -rwxr-xr-x 1 boinc boinc      7986 May 16 21:59 run_atlas
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc       105 May 16 21:59 job.xml
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc      6644 May 16 21:59 init_data.xml
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc 601776077 May 16 21:59 EVNT.38776100._000042.pool.root.1
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc     17537 May 16 21:59 start_atlas.sh
[2024-05-17 00:27:45] drwxrwx--x 2 boinc boinc      4096 May 16 21:59 shared
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc    480000 May 16 21:59 input.tar.gz
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc         0 May 16 21:59 boinc_lockfile
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc      2638 May 16 21:59 pandaJob.out
[2024-05-17 00:27:45] -rw------- 1 boinc boinc       424 May 16 21:59 setup.sh.local
[2024-05-17 00:27:45] -rw------- 1 boinc boinc   1019286 May 16 21:59 agis_schedconf.cvmfs.json
[2024-05-17 00:27:45] -rw------- 1 boinc boinc         0 May 16 21:59 agis_ddmendpoints.agis.ALL.json
[2024-05-17 00:27:45] -rw------- 1 boinc boinc   1324701 May 16 21:59 cric_ddmendpoints.json
[2024-05-17 00:27:45] drwx------ 4 boinc boinc      4096 May 16 21:59 pilot3
[2024-05-17 00:27:45] -rw------- 1 boinc boinc        95 May 17 00:26 pilot_heartbeat.json
[2024-05-17 00:27:45] -rw------- 1 boinc boinc 232209345 May 17 00:26 HITS.38776104._001027.pool.root.1
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc       531 May 17 00:26 boinc_task_state.xml
[2024-05-17 00:27:45] -rw------- 1 boinc boinc      1040 May 17 00:27 memory_monitor_summary.json
[2024-05-17 00:27:45] -rw------- 1 boinc boinc    274516 May 17 00:27 log.38776104._001027.job.log.tgz.1
[2024-05-17 00:27:45] -rw------- 1 boinc boinc      7708 May 17 00:27 heartbeat.json
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc        27 May 17 00:27 wrapper_checkpoint.txt
[2024-05-17 00:27:45] -rw------- 1 boinc boinc      4418 May 17 00:27 pilotlog.txt
[2024-05-17 00:27:45] -rw------- 1 boinc boinc    902553 May 17 00:27 log.38776104._001027.job.log.1
[2024-05-17 00:27:45] -rw------- 1 boinc boinc       357 May 17 00:27 output.list
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc       620 May 17 00:27 runtime_log
[2024-05-17 00:27:45] -rw------- 1 boinc boinc   1198080 May 17 00:27 result.tar.gz
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc     11428 May 17 00:27 runtime_log.err
[2024-05-17 00:27:45] -rw------- 1 boinc boinc       655 May 17 00:27 n7fNDmlo4Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDmidMKDmOeGTYo.diag
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc      8192 May 17 00:27 boinc_mmap_file
[2024-05-17 00:27:45] -rw-r--r-- 1 boinc boinc     21287 May 17 00:27 stderr.txt
[2024-05-17 00:27:45] HITS file was successfully produced:
[2024-05-17 00:27:45] -rw------- 1 boinc boinc 232209345 May 17 00:26 shared/HITS.pool.root.1
[2024-05-17 00:27:45]  *** Contents of shared directory: ***
[2024-05-17 00:27:45] total 816112
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc 601776077 May 16 21:59 ATLAS.root_0
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc     17537 May 16 21:59 start_atlas.sh
[2024-05-17 00:27:45] -rw-r--r-- 2 boinc boinc    480000 May 16 21:59 input.tar.gz
[2024-05-17 00:27:45] -rw------- 1 boinc boinc 232209345 May 17 00:26 HITS.pool.root.1
[2024-05-17 00:27:45] -rw------- 1 boinc boinc   1198080 May 17 00:27 result.tar.gz
00:27:47 (66905): run_atlas exited; CPU time 32384.205880
00:27:47 (66905): called boinc_finish(0)

</stderr_txt>
]]>

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