Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:01 (3400527): wrapper (7.7.26015): starting
01:01:01 (3400527): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 01:01:01] Arguments: --nthreads 4
[2024-05-16 01:01:01] Threads: 4
[2024-05-16 01:01:01] Checking for CVMFS
[2024-05-16 01:01:01] No cvmfs_config command found, will try listing directly
[2024-05-16 01:01:01] CVMFS is ok
[2024-05-16 01:01:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 01:01:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 01:01:01] Further information can be found at the LHC@home message board.
[2024-05-16 01:01:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 01:01:01] Checking for apptainer binary...
[2024-05-16 01:01:01] which: no apptainer in ((null))
[2024-05-16 01:01:01] apptainer is not installed, using version from CVMFS
[2024-05-16 01:01:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 01:01:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-16 01:01:02] apptainer works
[2024-05-16 01:01:02] Set ATHENA_PROC_NUMBER=4
[2024-05-16 01:01:02] Set ATHENA_CORE_NUMBER=4
[2024-05-16 01:01:02] Starting ATLAS job with PandaID=6206084755
[2024-05-16 01:01:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 03:40:44]  *** The last 200 lines of the pilot log: ***
[2024-05-16 03:40:44] 2024-05-16 01:40:21,009 | INFO     | current chi2=0.0008194007550475246 (change=53.58407150793764 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,009 | INFO     | model: linear, x: [1715815623.0, 1715815684.0, 1715815745.0, 1715815806.0, 1715815867.0, 1715815928.0, 1715815989.0, 1715816050.0, 1715816111.0, 1715816172.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,009 | INFO     | sum of square deviations: 697054930.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | sum of deviations: 1363718562.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | mean x: 1715819588.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | mean y: 2345383.427480916
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | -- intersect: -3354484789.481263
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | intersect: -3354484789.481263
[2024-05-16 03:40:44] 2024-05-16 01:40:21,010 | INFO     | chi2: 0.0004590865392996537
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | current chi2=0.0004590865392996537 (change=43.97289281567393 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | model: linear, x: [1715815928.0, 1715815989.0, 1715816050.0, 1715816111.0, 1715816172.0, 1715816233.0, 1715816294.0, 1715816355.0, 1715816416.0, 1715816477.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | sum of square deviations: 620244187.5
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | sum of deviations: 932872451.0000001
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | mean x: 1715819740.5
[2024-05-16 03:40:44] 2024-05-16 01:40:21,011 | INFO     | mean y: 2346237.746031746
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | -- intersect: -2578316344.9152837
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | intersect: -2578316344.9152837
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | chi2: 0.00024628041403636615
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | current chi2=0.00024628041403636615 (change=46.3542506796056 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | model: linear, x: [1715816233.0, 1715816294.0, 1715816355.0, 1715816416.0, 1715816477.0, 1715816538.0, 1715816599.0, 1715816660.0, 1715816721.0, 1715816782.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,012 | INFO     | sum of square deviations: 549294020.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | sum of deviations: 618082134.0000001
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | mean x: 1715819893.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | mean y: 2346912.727272727
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | -- intersect: -1928345180.052277
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | intersect: -1928345180.052277
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | chi2: 0.00011620255162242634
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | current chi2=0.00011620255162242634 (change=52.816974067102365 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | model: linear, x: [1715816538.0, 1715816599.0, 1715816660.0, 1715816721.0, 1715816782.0, 1715816843.0, 1715816904.0, 1715816965.0, 1715817026.0, 1715817087.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,013 | INFO     | sum of square deviations: 483971865.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | sum of deviations: 419588683.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | mean x: 1715820045.5
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | mean y: 2347373.327586207
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | -- intersect: -1485215696.3899996
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | intersect: -1485215696.3899996
[2024-05-16 03:40:44] 2024-05-16 01:40:21,014 | INFO     | chi2: 5.69037969783157e-05
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | current chi2=5.69037969783157e-05 (change=51.030509929582614 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | model: linear, x: [1715816843.0, 1715816904.0, 1715816965.0, 1715817026.0, 1715817087.0, 1715817148.0, 1715817209.0, 1715817270.0, 1715817331.0, 1715817392.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | sum of square deviations: 424045160.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | sum of deviations: 387768216.00000006
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | mean x: 1715820198.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,015 | INFO     | mean y: 2347454.4234234234
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | -- intersect: -1566684808.9214213
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | intersect: -1566684808.9214213
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | chi2: 5.549327611379457e-05
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | current chi2=5.549327611379457e-05 (change=2.478781626924894 %)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | left removable region: 90
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | model: linear, x: [1715819588.0, 1715819649.0, 1715819710.0, 1715819771.0, 1715819832.0, 1715819893.0, 1715819954.0, 1715820015.0, 1715820076.0, 1715820137.0, 1715
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | sum of square deviations: 66959395.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | sum of deviations: 120693502.0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,016 | INFO     | mean x: 1715821387.5
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | mean y: 2347823.933333333
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | -- intersect: -3090399535.3263197
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | intersect: -3090399535.3263197
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | chi2: 2.2453544989843137e-05
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | -- intersect: -3090399535.3263197
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | current memory leak: 1.80 B/s (using 60 data points, chi2=0.00)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,017 | INFO     | ..............................
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . Timing measurements:
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . get job = 0 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . initial setup = 1 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . payload setup = 5 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . stage-in = 0 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . payload execution = 9519 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . stage-out = 0 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | . log creation = 0 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,018 | INFO     | ..............................
[2024-05-16 03:40:44] 2024-05-16 01:40:21,102 | INFO     | 
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | job summary report
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | --------------------------------------------------
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | PanDA job id: 6206084755
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | task id: 38776104
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | errors: (none)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | pilot state: finished 
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | transexitcode: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | exeerrorcode: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | exeerrordiag: 
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | exitcode: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | exitmsg: OK
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | cpuconsumptiontime: 35358 s
[2024-05-16 03:40:44] 2024-05-16 01:40:21,103 | INFO     | nevents: 400
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | neventsw: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | pid: 3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | pgrp: 3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | corecount: 4
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | event service: False
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | sizes: {0: 2392093, 1: 2392235, 5: 2392441, 11: 2392497, 9528: 2420865, 9529: 2430031, 9533: 2430145}
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | --------------------------------------------------
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | 
[2024-05-16 03:40:44] 2024-05-16 01:40:21,104 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/1
[2024-05-16 03:40:44] 2024-05-16 01:40:21,247 | WARNING  | process 3415175 is no longer using CPU - aborting
[2024-05-16 03:40:44] 2024-05-16 01:40:21,247 | INFO     | aborting job monitoring since job object (job id=6206084755) has expired
[2024-05-16 03:40:44] 2024-05-16 01:40:21,267 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,268 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | job 6206084755 has completed (purged errors)
[2024-05-16 03:40:44] 2024-05-16 01:40:21,269 | INFO     | overall cleanup function is called
[2024-05-16 03:40:44] 2024-05-16 01:40:22,274 | INFO     | --- collectZombieJob: --- 10, [3415175]
[2024-05-16 03:40:44] 2024-05-16 01:40:22,274 | INFO     | zombie collector waiting for pid 3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:22,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 03:40:44] 2024-05-16 01:40:23,279 | INFO     | collected zombie processes
[2024-05-16 03:40:44] 2024-05-16 01:40:23,279 | INFO     | will now attempt to kill all subprocesses of pid=3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:23,488 | INFO     | process IDs to be killed: [3415175] (in reverse order)
[2024-05-16 03:40:44] 2024-05-16 01:40:23,676 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 03:40:44] 2024-05-16 01:40:23,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 03:40:44] 2024-05-16 01:40:23,697 | INFO     | did not find any defunct processes belonging to 3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:23,713 | INFO     | did not find any defunct processes belonging to 3415175
[2024-05-16 03:40:44] 2024-05-16 01:40:23,714 | INFO     | ready for new job
[2024-05-16 03:40:44] 2024-05-16 01:40:23,714 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 03:40:44] 2024-05-16 01:40:23,716 | INFO     | *************************************
[2024-05-16 03:40:44] 2024-05-16 01:40:23,716 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 03:40:44] 2024-05-16 01:40:23,716 | INFO     | *************************************
[2024-05-16 03:40:44] 2024-05-16 01:40:23,716 | INFO     | 
[2024-05-16 03:40:44] 2024-05-16 01:40:23,729 | INFO     | architecture information:
[2024-05-16 03:40:44] 2024-05-16 01:40:23,730 | INFO     | executing command: cat /etc/os-release
[2024-05-16 03:40:44] 2024-05-16 01:40:23,751 | INFO     | cat /etc/os-release:
[2024-05-16 03:40:44] NAME="CentOS Linux"
[2024-05-16 03:40:44] VERSION="7 (Core)"
[2024-05-16 03:40:44] ID="centos"
[2024-05-16 03:40:44] ID_LIKE="rhel fedora"
[2024-05-16 03:40:44] VERSION_ID="7"
[2024-05-16 03:40:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 03:40:44] ANSI_COLOR="0;31"
[2024-05-16 03:40:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 03:40:44] HOME_URL="https://www.centos.org/"
[2024-05-16 03:40:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 03:40:44] 
[2024-05-16 03:40:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 03:40:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 03:40:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 03:40:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 03:40:44] 
[2024-05-16 03:40:44] 2024-05-16 01:40:23,751 | INFO     | *************************************
[2024-05-16 03:40:44] 2024-05-16 01:40:24,254 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/1
[2024-05-16 03:40:44] 2024-05-16 01:40:24,275 | INFO     | sufficient remaining disk space (3013585403904 B)
[2024-05-16 03:40:44] 2024-05-16 01:40:24,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 03:40:44] 2024-05-16 01:40:24,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 03:40:44] 2024-05-16 01:40:24,380 | INFO     | all job control threads have been joined
[2024-05-16 03:40:44] 2024-05-16 01:40:24,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 03:40:44] 2024-05-16 01:40:24,755 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:40:44] 2024-05-16 01:40:24,756 | INFO     | aborting loop
[2024-05-16 03:40:44] 2024-05-16 01:40:24,871 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 03:40:44] 2024-05-16 01:40:24,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 03:40:44] 2024-05-16 01:40:24,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 03:40:44] 2024-05-16 01:40:24,967 | INFO     | all data control threads have been joined
[2024-05-16 03:40:44] 2024-05-16 01:40:25,280 | INFO     | [job] retrieve thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,321 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,385 | INFO     | [job] control thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,415 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,684 | INFO     | all payload control threads have been joined
[2024-05-16 03:40:44] 2024-05-16 01:40:25,761 | INFO     | [job] job monitor thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,971 | INFO     | [data] control thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:25,982 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,113 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 03:40:44] 2024-05-16 01:40:26,363 | INFO     | [payload] failed_post thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,577 | INFO     | [data] copytool_in thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,639 | INFO     | [data] copytool_out thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,645 | INFO     | [payload] validate_post thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,689 | INFO     | [payload] control thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:26,694 | INFO     | [job] validate thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:27,118 | INFO     | [job] queue monitor thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:27,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 03:40:44] 2024-05-16 01:40:31,257 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:35,236 | INFO     | job.realtimelogging is not enabled
[2024-05-16 03:40:44] 2024-05-16 01:40:36,241 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 03:40:44] 2024-05-16 01:40:38,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47461553525824)>', '<ExcThread(monitor, started 47461731079936)>']
[2024-05-16 03:40:44] 2024-05-16 01:40:38,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 03:40:44] 2024-05-16 01:40:38,942 | INFO     | [monitor] control thread has ended
[2024-05-16 03:40:44] 2024-05-16 01:40:43,349 | INFO     | all workflow threads have been joined
[2024-05-16 03:40:44] 2024-05-16 01:40:43,349 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 03:40:44] 2024-05-16 01:40:43,350 | INFO     | traces error code: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:43,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 03:40:44] 2024-05-16 01:40:43,418 [wrapper] ==== pilot stdout END ====
[2024-05-16 03:40:44] 2024-05-16 01:40:43,421 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 03:40:44] 2024-05-16 01:40:43,424 [wrapper] pilotpid: 3405232
[2024-05-16 03:40:44] 2024-05-16 01:40:43,426 [wrapper] Pilot exit status: 0
[2024-05-16 03:40:44] 2024-05-16 01:40:43,435 [wrapper] pandaids: 6206084755
[2024-05-16 03:40:44] 2024-05-16 01:40:43,521 [wrapper] cleanup: SIGTERM to supervisor_pilot  118451 3405233
[2024-05-16 03:40:44] 2024-05-16 01:40:43,524 [wrapper] Test setup, not cleaning
[2024-05-16 03:40:44] 2024-05-16 01:40:43,525 [wrapper] ==== wrapper stdout END ====
[2024-05-16 03:40:44] 2024-05-16 01:40:43,527 [wrapper] ==== wrapper stderr END ====
[2024-05-16 03:40:44] 2024-05-16 01:40:43,532 [wrapper] apfmon messages muted
[2024-05-16 03:40:44]  *** Error codes and diagnostics ***
[2024-05-16 03:40:44]     "exeErrorCode": 0,
[2024-05-16 03:40:44]     "exeErrorDiag": "",
[2024-05-16 03:40:44]     "pilotErrorCode": 0,
[2024-05-16 03:40:44]     "pilotErrorDiag": "",
[2024-05-16 03:40:44]  *** Listing of results directory ***
[2024-05-16 03:40:44] total 816504
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc    467845 May 14 11:44 pilot3.tar.gz
[2024-05-16 03:40:44] -rwx------ 1 boinc boinc     32251 May 14 11:49 runpilot2-wrapper.sh
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc      5633 May 14 11:49 queuedata.json
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc       100 May 16 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 03:40:44] -rwxr-xr-x 1 boinc boinc      7986 May 16 00:26 run_atlas
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc       105 May 16 00:26 job.xml
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc      6644 May 16 01:01 init_data.xml
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc 598408915 May 16 01:01 EVNT.38776100._000028.pool.root.1
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc     17537 May 16 01:01 start_atlas.sh
[2024-05-16 03:40:44] drwxrwx--x 2 boinc boinc      4096 May 16 01:01 shared
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc    480000 May 16 01:01 input.tar.gz
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc         0 May 16 01:01 boinc_lockfile
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc      2638 May 16 01:01 pandaJob.out
[2024-05-16 03:40:44] -rw------- 1 boinc boinc       424 May 16 01:01 setup.sh.local
[2024-05-16 03:40:44] -rw------- 1 boinc boinc   1011339 May 16 01:01 agis_schedconf.cvmfs.json
[2024-05-16 03:40:44] -rw------- 1 boinc boinc         0 May 16 01:01 agis_ddmendpoints.agis.ALL.json
[2024-05-16 03:40:44] -rw------- 1 boinc boinc   1324701 May 16 01:01 cric_ddmendpoints.json
[2024-05-16 03:40:44] drwx------ 4 boinc boinc      4096 May 16 01:01 pilot3
[2024-05-16 03:40:44] -rw------- 1 boinc boinc        95 May 16 03:39 pilot_heartbeat.json
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc       531 May 16 03:39 boinc_task_state.xml
[2024-05-16 03:40:44] -rw------- 1 boinc boinc 231467612 May 16 03:39 HITS.38776104._000698.pool.root.1
[2024-05-16 03:40:44] -rw------- 1 boinc boinc      1038 May 16 03:40 memory_monitor_summary.json
[2024-05-16 03:40:44] -rw------- 1 boinc boinc    310690 May 16 03:40 log.38776104._000698.job.log.tgz.1
[2024-05-16 03:40:44] -rw------- 1 boinc boinc      7708 May 16 03:40 heartbeat.json
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc      8192 May 16 03:40 boinc_mmap_file
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc        27 May 16 03:40 wrapper_checkpoint.txt
[2024-05-16 03:40:44] -rw------- 1 boinc boinc      4294 May 16 03:40 pilotlog.txt
[2024-05-16 03:40:44] -rw------- 1 boinc boinc   1038427 May 16 03:40 log.38776104._000698.job.log.1
[2024-05-16 03:40:44] -rw------- 1 boinc boinc       357 May 16 03:40 output.list
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc       620 May 16 03:40 runtime_log
[2024-05-16 03:40:44] -rw------- 1 boinc boinc   1372160 May 16 03:40 result.tar.gz
[2024-05-16 03:40:44] -rw------- 1 boinc boinc       655 May 16 03:40 vk8NDmox3Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDmtYMKDmBnHIVn.diag
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc     11409 May 16 03:40 runtime_log.err
[2024-05-16 03:40:44] -rw-r--r-- 1 boinc boinc     21410 May 16 03:40 stderr.txt
[2024-05-16 03:40:44] HITS file was successfully produced:
[2024-05-16 03:40:44] -rw------- 1 boinc boinc 231467612 May 16 03:39 shared/HITS.pool.root.1
[2024-05-16 03:40:44]  *** Contents of shared directory: ***
[2024-05-16 03:40:44] total 812268
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc 598408915 May 16 01:01 ATLAS.root_0
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc     17537 May 16 01:01 start_atlas.sh
[2024-05-16 03:40:44] -rw-r--r-- 2 boinc boinc    480000 May 16 01:01 input.tar.gz
[2024-05-16 03:40:44] -rw------- 1 boinc boinc 231467612 May 16 03:39 HITS.pool.root.1
[2024-05-16 03:40:44] -rw------- 1 boinc boinc   1372160 May 16 03:40 result.tar.gz
03:40:45 (3400527): run_atlas exited; CPU time 34904.522842
03:40:45 (3400527): called boinc_finish(0)

</stderr_txt>
]]>

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