Stderr output

<core_client_version>7.22.1</core_client_version>
<![CDATA[
<stderr_txt>
10:52:41 (2097438): wrapper (7.7.26015): starting
10:52:41 (2097438): wrapper: running run_atlas (--nthreads 12)
[2024-05-15 10:52:42] Arguments: --nthreads 12
[2024-05-15 10:52:42] Threads: 12
[2024-05-15 10:52:42] Checking for CVMFS
[2024-05-15 10:52:42] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 10:52:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 10:52:42] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 10:52:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 10:52:42] 2.11.0.0 4134405 360 76508 132757 3 104 4987275 6144001 10036 130560 0 2735236 99.601 1075714 2069 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.145:3128 1
[2024-05-15 10:52:42] CVMFS is ok
[2024-05-15 10:52:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 10:52:42] Checking for apptainer binary...
[2024-05-15 10:52:42] apptainer is not installed, using version from CVMFS
[2024-05-15 10:52:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 10:52:42] radiat0r
[2024-05-15 10:52:42] apptainer works
[2024-05-15 10:52:42] Set ATHENA_PROC_NUMBER=12
[2024-05-15 10:52:42] Set ATHENA_CORE_NUMBER=12
[2024-05-15 10:52:42] Starting ATLAS job with PandaID=6206084634
[2024-05-15 10:52:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:58:29]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:58:29]  filesize=349000
[2024-05-15 11:58:29]  filetype=log
[2024-05-15 11:58:29]  guid=a58268b6-0880-43d5-a06c-e5007a655ca5
[2024-05-15 11:58:29]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-15 11:58:29]  is_tar=False
[2024-05-15 11:58:29]  lfn=log.38776104._000583.job.log.tgz.1
[2024-05-15 11:58:29]  mtime=0
[2024-05-15 11:58:29]  protocol_id=None
[2024-05-15 11:58:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-15 11:58:29]  replicas=None
[2024-05-15 11:58:29]  scope=mc23_13p6TeV
[2024-05-15 11:58:29]  status=None
[2024-05-15 11:58:29]  status_code=0
[2024-05-15 11:58:29]  storage_token=
[2024-05-15 11:58:29]  surl=/home/boinc/slots/3/PanDA_Pilot-6206084634/log.38776104._000583.job.log.tgz.1
[2024-05-15 11:58:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/bd/log.38776104._000583.job.log.tgz.1
[2024-05-15 11:58:29]  workdir=None
[2024-05-15 11:58:29] ]
[2024-05-15 11:58:29] 2024-05-15 11:57:58,726 | INFO     | transferring file log.38776104._000583.job.log.tgz.1 from /home/boinc/slots/3/PanDA_Pilot-6206084634/log.38776104._000583.job.log.tgz.1 to /home/boinc/slots/3/log.
[2024-05-15 11:58:29] 2024-05-15 11:57:58,726 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/3/PanDA_Pilot-6206084634/log.38776104._000583.job.log.tgz.1 /home/boinc/slots/3/log.38776104._000583.job.log.t
[2024-05-15 11:58:29] 2024-05-15 11:57:58,745 | INFO     | adding to output.list: log.38776104._000583.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/13/bd/log.38776104._000583.job.log.tg
[2024-05-15 11:58:29] 2024-05-15 11:57:58,746 | INFO     | summary of transferred files:
[2024-05-15 11:58:29] 2024-05-15 11:57:58,746 | INFO     |  -- lfn=log.38776104._000583.job.log.tgz.1, status_code=0, status=transferred
[2024-05-15 11:58:29] 2024-05-15 11:57:58,746 | INFO     | stage-out finished correctly
[2024-05-15 11:58:29] 2024-05-15 11:58:00,817 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-15 11:58:29] 2024-05-15 11:58:01,918 | WARNING  | process 2111670 is no longer using CPU - aborting
[2024-05-15 11:58:29] 2024-05-15 11:58:01,918 | INFO     | will not send any job update
[2024-05-15 11:58:29] 2024-05-15 11:58:02,545 | INFO     | job 6206084634 has state=finished
[2024-05-15 11:58:29] 2024-05-15 11:58:02,546 | INFO     | preparing for final server update for job 6206084634 in state='finished'
[2024-05-15 11:58:29] 2024-05-15 11:58:02,546 | INFO     | this job has now completed (state=finished)
[2024-05-15 11:58:29] 2024-05-15 11:58:02,547 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-15 11:58:29] 2024-05-15 11:58:02,547 | INFO     | job 6206084634 has finished - writing final server update
[2024-05-15 11:58:29] 2024-05-15 11:58:02,547 | INFO     | total number of processed events: 400 (read)
[2024-05-15 11:58:29] 2024-05-15 11:58:02,583 | INFO     | executing command: lscpu
[2024-05-15 11:58:29] 2024-05-15 11:58:02,711 | INFO     | found 128 cores (64 cores per socket, 2 sockets)
[2024-05-15 11:58:29] 2024-05-15 11:58:02,711 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-15 11:58:29] 2024-05-15 11:58:02,780 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-15 11:58:29] 2024-05-15 11:58:04,421 | INFO     | monitor loop #301: job 0:6206084634 is in state 'finished'
[2024-05-15 11:58:29] 2024-05-15 11:58:04,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 11:58:29] 2024-05-15 11:58:06,925 | INFO     | monitor loop #302: job 0:6206084634 is in state 'finished'
[2024-05-15 11:58:29] 2024-05-15 11:58:06,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,707 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-15 11:58:29] 2024-05-15 11:58:07,708 | INFO     | using path: /home/boinc/slots/3/PanDA_Pilot-6206084634/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,709 | INFO     | extracted standard info from prmon json
[2024-05-15 11:58:29] 2024-05-15 11:58:07,709 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 11:58:29] 2024-05-15 11:58:07,709 | WARNING  | GPU info not found in prmon json
[2024-05-15 11:58:29] 2024-05-15 11:58:07,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-15 11:58:29] 2024-05-15 11:58:07,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-15 11:58:29] 2024-05-15 11:58:07,711 | INFO     | fitting pss+swap vs Time
[2024-05-15 11:58:29] 2024-05-15 11:58:07,711 | INFO     | model: linear, x: [1715770706.0, 1715770767.0, 1715770828.0, 1715770889.0, 1715770950.0, 1715771011.0, 1715771072.0, 1715771133.0, 1715771194.0, 1715771255.0, 1715
[2024-05-15 11:58:29] 2024-05-15 11:58:07,711 | INFO     | sum of square deviations: 57407588.0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,711 | INFO     | sum of deviations: 16491841598.999998
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | mean x: 1715772414.0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | mean y: 2539437.192982456
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | -- intersect: -492898274852.755
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | intersect: -492898274852.755
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | chi2: 1.53730335663017
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | -- intersect: -492898274852.755
[2024-05-15 11:58:29] 2024-05-15 11:58:07,712 | INFO     | current memory leak: 287.28 B/s (using 57 data points, chi2=1.54)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | ..............................
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . Timing measurements:
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . get job = 0 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . initial setup = 1 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . payload setup = 6 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . stage-in = 0 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . payload execution = 3881 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . stage-out = 0 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | . log creation = 0 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,713 | INFO     | ..............................
[2024-05-15 11:58:29] 2024-05-15 11:58:07,946 | INFO     | 
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | job summary report
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | --------------------------------------------------
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | PanDA job id: 6206084634
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | task id: 38776104
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | errors: (none)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | pilot state: finished 
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | transexitcode: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | exeerrorcode: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,947 | INFO     | exeerrordiag: 
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | exitcode: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | exitmsg: OK
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | cpuconsumptiontime: 36193 s
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | nevents: 400
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | neventsw: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | pid: 2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | pgrp: 2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | corecount: 12
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | event service: False
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | sizes: {0: 2396526, 1: 2396668, 5: 2396874, 11: 2396930, 3887: 2422638, 3888: 2431775, 3891: 2431775, 3897: 2431945}
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | --------------------------------------------------
[2024-05-15 11:58:29] 2024-05-15 11:58:07,948 | INFO     | 
[2024-05-15 11:58:29] 2024-05-15 11:58:07,949 | INFO     | executing command: ls -lF /home/boinc/slots/3
[2024-05-15 11:58:29] 2024-05-15 11:58:07,976 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,976 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,976 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,976 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,977 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,978 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:58:29] 2024-05-15 11:58:07,978 | INFO     | job 6206084634 has completed (purged errors)
[2024-05-15 11:58:29] 2024-05-15 11:58:07,978 | INFO     | overall cleanup function is called
[2024-05-15 11:58:29] 2024-05-15 11:58:08,986 | INFO     | --- collectZombieJob: --- 10, [2111670]
[2024-05-15 11:58:29] 2024-05-15 11:58:08,986 | INFO     | zombie collector waiting for pid 2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:08,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:58:29] 2024-05-15 11:58:09,990 | INFO     | collected zombie processes
[2024-05-15 11:58:29] 2024-05-15 11:58:09,990 | INFO     | will now attempt to kill all subprocesses of pid=2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:10,211 | INFO     | process IDs to be killed: [2111670] (in reverse order)
[2024-05-15 11:58:29] 2024-05-15 11:58:10,432 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:58:29] 2024-05-15 11:58:10,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:58:29] 2024-05-15 11:58:10,464 | INFO     | did not find any defunct processes belonging to 2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:10,490 | INFO     | did not find any defunct processes belonging to 2111670
[2024-05-15 11:58:29] 2024-05-15 11:58:10,490 | INFO     | ready for new job
[2024-05-15 11:58:29] 2024-05-15 11:58:10,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:58:29] 2024-05-15 11:58:10,492 | INFO     | *************************************
[2024-05-15 11:58:29] 2024-05-15 11:58:10,492 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 11:58:29] 2024-05-15 11:58:10,492 | INFO     | *************************************
[2024-05-15 11:58:29] 2024-05-15 11:58:10,492 | INFO     | 
[2024-05-15 11:58:29] 2024-05-15 11:58:10,530 | INFO     | architecture information:
[2024-05-15 11:58:29] 2024-05-15 11:58:10,530 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:58:29] 2024-05-15 11:58:10,545 | INFO     | cat /etc/os-release:
[2024-05-15 11:58:29] NAME="CentOS Linux"
[2024-05-15 11:58:29] VERSION="7 (Core)"
[2024-05-15 11:58:29] ID="centos"
[2024-05-15 11:58:29] ID_LIKE="rhel fedora"
[2024-05-15 11:58:29] VERSION_ID="7"
[2024-05-15 11:58:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:58:29] ANSI_COLOR="0;31"
[2024-05-15 11:58:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:58:29] HOME_URL="https://www.centos.org/"
[2024-05-15 11:58:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:58:29] 
[2024-05-15 11:58:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:58:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:58:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:58:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:58:29] 
[2024-05-15 11:58:29] 2024-05-15 11:58:10,545 | INFO     | *************************************
[2024-05-15 11:58:29] 2024-05-15 11:58:11,046 | INFO     | executing command: df -mP /home/boinc/slots/3
[2024-05-15 11:58:29] 2024-05-15 11:58:11,065 | INFO     | sufficient remaining disk space (1702957678592 B)
[2024-05-15 11:58:29] 2024-05-15 11:58:11,066 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:58:29] 2024-05-15 11:58:11,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:58:29] 2024-05-15 11:58:11,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:58:29] 2024-05-15 11:58:11,067 | INFO     | aborting loop
[2024-05-15 11:58:29] 2024-05-15 11:58:11,119 | INFO     | all data control threads have been joined
[2024-05-15 11:58:29] 2024-05-15 11:58:11,283 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:58:29] 2024-05-15 11:58:11,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:58:29] 2024-05-15 11:58:11,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:58:29] 2024-05-15 11:58:11,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:58:29] 2024-05-15 11:58:11,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:58:29] 2024-05-15 11:58:12,071 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,072 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,089 | INFO     | all payload control threads have been joined
[2024-05-15 11:58:29] 2024-05-15 11:58:12,125 | INFO     | [data] control thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,173 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,219 | INFO     | all job control threads have been joined
[2024-05-15 11:58:29] 2024-05-15 11:58:12,403 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,489 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:12,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:58:29] 2024-05-15 11:58:12,853 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,094 | INFO     | [payload] control thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,222 | INFO     | [job] control thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,388 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,502 | INFO     | [job] validate thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,567 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,844 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:13,875 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:15,430 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:22,025 | INFO     | job.realtimelogging is not enabled
[2024-05-15 11:58:29] 2024-05-15 11:58:23,030 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:58:29] 2024-05-15 11:58:23,860 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057040308032)>', '<ExcThread(monitor, started 140056266274560)>']
[2024-05-15 11:58:29] 2024-05-15 11:58:24,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:58:29] 2024-05-15 11:58:24,349 | INFO     | [monitor] control thread has ended
[2024-05-15 11:58:29] 2024-05-15 11:58:28,885 | INFO     | all workflow threads have been joined
[2024-05-15 11:58:29] 2024-05-15 11:58:28,886 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:58:29] 2024-05-15 11:58:28,886 | INFO     | traces error code: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:28,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:58:29] 2024-05-15 11:58:28,999 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:58:29] 2024-05-15 11:58:29,001 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:58:29] 2024-05-15 11:58:29,004 [wrapper] pilotpid: 2102999
[2024-05-15 11:58:29] 2024-05-15 11:58:29,007 [wrapper] Pilot exit status: 0
[2024-05-15 11:58:29] 2024-05-15 11:58:29,017 [wrapper] pandaids: 6206084634
[2024-05-15 11:58:29] 2024-05-15 11:58:29,108 [wrapper] cleanup: SIGTERM to supervisor_pilot 2592265 2103000
[2024-05-15 11:58:29] 2024-05-15 11:58:29,115 [wrapper] Test setup, not cleaning
[2024-05-15 11:58:29] 2024-05-15 11:58:29,117 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:58:29] 2024-05-15 11:58:29,119 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:58:29] 2024-05-15 11:58:29,124 [wrapper] apfmon messages muted
[2024-05-15 11:58:29]  *** Error codes and diagnostics ***
[2024-05-15 11:58:29]     "exeErrorCode": 0,
[2024-05-15 11:58:29]     "exeErrorDiag": "",
[2024-05-15 11:58:29]     "pilotErrorCode": 0,
[2024-05-15 11:58:29]     "pilotErrorDiag": "",
[2024-05-15 11:58:29]  *** Listing of results directory ***
[2024-05-15 11:58:29] total 822044
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc    467845 May 14 09:14 pilot3.tar.gz
[2024-05-15 11:58:29] -rwx------ 1 boinc boinc     32251 May 14 09:39 runpilot2-wrapper.sh
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc      5633 May 14 09:39 queuedata.json
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc       100 May 15 10:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:58:29] -rwxr-xr-x 1 boinc boinc      7986 May 15 10:52 run_atlas
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc       105 May 15 10:52 job.xml
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc 601275885 May 15 10:52 EVNT.38776100._000024.pool.root.1
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc     17537 May 15 10:52 start_atlas.sh
[2024-05-15 11:58:29] drwxrwx--x 2 boinc boinc      4096 May 15 10:52 shared
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc    480001 May 15 10:52 input.tar.gz
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc      9893 May 15 10:52 init_data.xml
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc         0 May 15 10:52 boinc_lockfile
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc      2637 May 15 10:52 pandaJob.out
[2024-05-15 11:58:29] -rw------- 1 boinc boinc       424 May 15 10:52 setup.sh.local
[2024-05-15 11:58:29] -rw------- 1 boinc boinc   1010540 May 15 10:52 agis_schedconf.cvmfs.json
[2024-05-15 11:58:29] -rw------- 1 boinc boinc         0 May 15 10:52 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:58:29] -rw------- 1 boinc boinc   1325758 May 15 10:52 cric_ddmendpoints.json
[2024-05-15 11:58:29] drwx------ 4 boinc boinc      4096 May 15 10:52 pilot3
[2024-05-15 11:58:29] -rw------- 1 boinc boinc 235487496 May 15 11:57 HITS.38776104._000583.pool.root.1
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc       530 May 15 11:57 boinc_task_state.xml
[2024-05-15 11:58:29] -rw------- 1 boinc boinc      1023 May 15 11:57 memory_monitor_summary.json
[2024-05-15 11:58:29] -rw------- 1 boinc boinc    349000 May 15 11:57 log.38776104._000583.job.log.tgz.1
[2024-05-15 11:58:29] -rw------- 1 boinc boinc        95 May 15 11:58 pilot_heartbeat.json
[2024-05-15 11:58:29] -rw------- 1 boinc boinc      7643 May 15 11:58 heartbeat.json
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc      8192 May 15 11:58 boinc_mmap_file
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc        27 May 15 11:58 wrapper_checkpoint.txt
[2024-05-15 11:58:29] -rw------- 1 boinc boinc      4282 May 15 11:58 pilotlog.txt
[2024-05-15 11:58:29] -rw------- 1 boinc boinc    392552 May 15 11:58 log.38776104._000583.job.log.1
[2024-05-15 11:58:29] -rw------- 1 boinc boinc       357 May 15 11:58 output.list
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc       620 May 15 11:58 runtime_log
[2024-05-15 11:58:29] -rw------- 1 boinc boinc    757760 May 15 11:58 result.tar.gz
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc     10900 May 15 11:58 runtime_log.err
[2024-05-15 11:58:29] -rw------- 1 boinc boinc       631 May 15 11:58 1aLNDmAo3Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDmqXMKDmatLfWo.diag
[2024-05-15 11:58:29] -rw-r--r-- 1 boinc boinc     20954 May 15 11:58 stderr.txt
[2024-05-15 11:58:29] HITS file was successfully produced:
[2024-05-15 11:58:29] -rw------- 1 boinc boinc 235487496 May 15 11:57 shared/HITS.pool.root.1
[2024-05-15 11:58:29]  *** Contents of shared directory: ***
[2024-05-15 11:58:29] total 818396
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc 601275885 May 15 10:52 ATLAS.root_0
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc     17537 May 15 10:52 start_atlas.sh
[2024-05-15 11:58:29] -rw-r--r-- 2 boinc boinc    480001 May 15 10:52 input.tar.gz
[2024-05-15 11:58:29] -rw------- 1 boinc boinc 235487496 May 15 11:57 HITS.pool.root.1
[2024-05-15 11:58:29] -rw------- 1 boinc boinc    757760 May 15 11:58 result.tar.gz
11:58:30 (2097438): run_atlas exited; CPU time 36099.319962
11:58:30 (2097438): called boinc_finish(0)

</stderr_txt>
]]>

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