Name | V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm_0 |
Workunit | 222999661 |
Created | 14 May 2024, 8:29:47 UTC |
Sent | 14 May 2024, 11:40:11 UTC |
Report deadline | 22 May 2024, 11:40:11 UTC |
Received | 26 May 2024, 5:33:00 UTC |
Server state | Over |
Outcome | Computation error |
Client state | Compute error |
Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
Computer ID | 10691252 |
Run time | 1 hours 0 min 2 sec |
CPU time | 2 hours 2 min 28 sec |
Validate state | Invalid |
Credit | 0.00 |
Device peak FLOPS | 12.25 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.39 GB |
Peak swap size | 2.92 GB |
Peak disk usage | 1.98 GB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <message> process exited with code 195 (0xc3, -61)</message> <stderr_txt> 00:30:30 (544895): wrapper (7.7.26015): starting 00:30:30 (544895): wrapper: running run_atlas (--nthreads 4) [2024-05-20 00:30:30] Arguments: --nthreads 4 [2024-05-20 00:30:30] Threads: 4 [2024-05-20 00:30:30] Checking for CVMFS [2024-05-20 00:30:30] No cvmfs_config command found, will try listing directly [2024-05-20 00:30:30] CVMFS is ok [2024-05-20 00:30:30] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-20 00:30:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-20 00:30:30] Further information can be found at the LHC@home message board. [2024-05-20 00:30:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-20 00:30:30] Checking for apptainer binary... [2024-05-20 00:30:30] which: no apptainer in ((null)) [2024-05-20 00:30:30] apptainer is not installed, using version from CVMFS [2024-05-20 00:30:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-20 00:30:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz [2024-05-20 00:30:31] apptainer works [2024-05-20 00:30:31] Set ATHENA_PROC_NUMBER=4 [2024-05-20 00:30:31] Set ATHENA_CORE_NUMBER=4 [2024-05-20 00:30:31] Starting ATLAS job with PandaID=6206055791 [2024-05-20 00:30:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 05:51:46 (1435660): wrapper (7.7.26015): starting 05:51:46 (1435660): wrapper: running run_atlas (--nthreads 4) [2024-05-20 05:51:46] Arguments: --nthreads 4 [2024-05-20 05:51:46] Threads: 4 [2024-05-20 05:51:46] This job has been restarted, cleaning up previous attempt [2024-05-20 05:51:46] Checking for CVMFS [2024-05-20 05:51:46] No cvmfs_config command found, will try listing directly [2024-05-20 05:51:46] CVMFS is ok [2024-05-20 05:51:46] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-20 05:51:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-20 05:51:46] Further information can be found at the LHC@home message board. [2024-05-20 05:51:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-20 05:51:46] Checking for apptainer binary... [2024-05-20 05:51:46] which: no apptainer in ((null)) [2024-05-20 05:51:46] apptainer is not installed, using version from CVMFS [2024-05-20 05:51:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-20 05:51:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz [2024-05-20 05:51:47] apptainer works [2024-05-20 05:51:47] Set ATHENA_PROC_NUMBER=4 [2024-05-20 05:51:47] Set ATHENA_CORE_NUMBER=4 [2024-05-20 05:51:47] Starting ATLAS job with PandaID=6206055791 [2024-05-20 05:51:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 00:13:40 (4066939): wrapper (7.7.26015): starting 00:13:40 (4066939): wrapper: running run_atlas (--nthreads 4) [2024-05-21 00:13:40] Arguments: --nthreads 4 [2024-05-21 00:13:40] Threads: 4 [2024-05-21 00:13:40] This job has been restarted, cleaning up previous attempt [2024-05-21 00:13:40] Checking for CVMFS [2024-05-21 00:13:40] No cvmfs_config command found, will try listing directly [2024-05-21 00:13:40] CVMFS is ok [2024-05-21 00:13:40] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-21 00:13:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-21 00:13:40] Further information can be found at the LHC@home message board. [2024-05-21 00:13:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-21 00:13:40] Checking for apptainer binary... [2024-05-21 00:13:40] which: no apptainer in ((null)) [2024-05-21 00:13:40] apptainer is not installed, using version from CVMFS [2024-05-21 00:13:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-21 00:13:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz [2024-05-21 00:13:41] apptainer works [2024-05-21 00:13:41] Set ATHENA_PROC_NUMBER=4 [2024-05-21 00:13:41] Set ATHENA_CORE_NUMBER=4 [2024-05-21 00:13:41] Starting ATLAS job with PandaID=6206055791 [2024-05-21 00:13:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-05-21 00:16:49] Job failed [2024-05-21 00:16:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/ [2024-05-21 00:16:49] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/ [2024-05-21 00:16:49] + mv ATLAS.root_0 EVNT.38776140._000487.pool.root.1 [2024-05-21 00:16:49] mv: 'ATLAS.root_0' and 'EVNT.38776140._000487.pool.root.1' are the same file [2024-05-21 00:16:49] + tar --strip-components=5 -xvf input.tar.gz [2024-05-21 00:16:49] + umask 077 [2024-05-21 00:16:49] ++ date +%s [2024-05-21 00:16:49] + ACCOUNTING_STARTTIME=1716243221 [2024-05-21 00:16:49] + echo 'Detecting resource accounting method available for the job.' [2024-05-21 00:16:49] Detecting resource accounting method available for the job. [2024-05-21 00:16:49] + JOB_ACCOUNTING= [2024-05-21 00:16:49] + command -v arc-job-cgroup [2024-05-21 00:16:49] + '[' -z '' ']' [2024-05-21 00:16:49] + GNU_TIME=/usr/bin/time [2024-05-21 00:16:49] + echo 'Looking for /usr/bin/time tool for accounting measurements' [2024-05-21 00:16:49] Looking for /usr/bin/time tool for accounting measurements [2024-05-21 00:16:49] + '[' '!' -z /usr/bin/time ']' [2024-05-21 00:16:49] + /usr/bin/time --version [2024-05-21 00:16:49] + echo 'GNU time found and will be used for job accounting.' [2024-05-21 00:16:49] GNU time found and will be used for job accounting. [2024-05-21 00:16:49] + JOB_ACCOUNTING=gnutime [2024-05-21 00:16:49] + '[' -z gnutime ']' [2024-05-21 00:16:49] + export PANDA_JSID=harvester-CERN_central_ACTA [2024-05-21 00:16:49] + PANDA_JSID=harvester-CERN_central_ACTA [2024-05-21 00:16:49] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206055791.out [2024-05-21 00:16:49] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206055791.out [2024-05-21 00:16:49] + export PILOT_NOKILL=YES [2024-05-21 00:16:49] + PILOT_NOKILL=YES [2024-05-21 00:16:49] + export GRID_GLOBAL_JOBID=V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-21 00:16:49] + GRID_GLOBAL_JOBID=V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-21 00:16:49] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-21 00:16:49] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-21 00:16:49] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest [2024-05-21 00:16:49] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest [2024-05-21 00:16:49] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch [2024-05-21 00:16:49] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/1 [2024-05-21 00:16:49] + RUNTIME_JOB_STDIN=/dev/null [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/1/log.38776146._012492.job.log.1 [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/1/log.38776146._012492.job.log.1 [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1.diag [2024-05-21 00:16:49] + '[' '!' -z '' ']' [2024-05-21 00:16:49] + RUNTIME_LOCAL_SCRATCH_DIR= [2024-05-21 00:16:49] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv [2024-05-21 00:16:49] + RUNTIME_FRONTEND_SEES_NODE= [2024-05-21 00:16:49] + RUNTIME_NODE_SEES_FRONTEND=yes [2024-05-21 00:16:49] + '[' '!' -z '' ']' [2024-05-21 00:16:49] + '[' -z yes ']' [2024-05-21 00:16:49] ++ pwd [2024-05-21 00:16:49] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-21 00:16:49] + runtimeenvironments= [2024-05-21 00:16:49] + runtimeenvironments='APPS/HEP/ATLAS-SITE;' [2024-05-21 00:16:49] + RTE_function_0 1 [2024-05-21 00:16:49] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-21 00:16:49] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-21 00:16:49] + export BOINC_APP=ATLAS [2024-05-21 00:16:49] + BOINC_APP=ATLAS [2024-05-21 00:16:49] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-21 00:16:49] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-21 00:16:49] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-21 00:16:49] + RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-21 00:16:49] + '[' -z 1 ']' [2024-05-21 00:16:49] + '[' 1 == 1 ']' [2024-05-21 00:16:49] + shift [2024-05-21 00:16:49] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)' [2024-05-21 00:16:49] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-21 00:16:49] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)' [2024-05-21 00:16:49] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/ [2024-05-21 00:16:49] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/ [2024-05-21 00:16:49] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']' [2024-05-21 00:16:49] + grep '<use_http_proxy/>' /scratch/boinc/var/slot8/slots/1/init_data.xml [2024-05-21 00:16:49] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']' [2024-05-21 00:16:49] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot8/slots/1/init_data.xml [2024-05-21 00:16:49] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)' [2024-05-21 00:16:49] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-21 00:16:49] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"' [2024-05-21 00:16:49] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-21 00:16:49] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-21 00:16:49] + '[' 0 -ne 0 ']' [2024-05-21 00:16:49] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;' [2024-05-21 00:16:49] + '[' -f /etc/os-release ']' [2024-05-21 00:16:49] +++ cat /etc/os-release [2024-05-21 00:16:49] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"' [2024-05-21 00:16:49] +++ NAME='CentOS Linux' [2024-05-21 00:16:49] +++ VERSION='7 (Core)' [2024-05-21 00:16:49] +++ ID=centos [2024-05-21 00:16:49] +++ ID_LIKE='rhel fedora' [2024-05-21 00:16:49] +++ VERSION_ID=7 [2024-05-21 00:16:49] +++ PRETTY_NAME='CentOS Linux 7 (Core)' [2024-05-21 00:16:49] +++ ANSI_COLOR='0;31' [2024-05-21 00:16:49] +++ CPE_NAME=cpe:/o:centos:centos:7 [2024-05-21 00:16:49] +++ HOME_URL=https://www.centos.org/ [2024-05-21 00:16:49] +++ BUG_REPORT_URL=https://bugs.centos.org/ [2024-05-21 00:16:49] +++ CENTOS_MANTISBT_PROJECT=CentOS-7 [2024-05-21 00:16:49] +++ CENTOS_MANTISBT_PROJECT_VERSION=7 [2024-05-21 00:16:49] +++ REDHAT_SUPPORT_PRODUCT=centos [2024-05-21 00:16:49] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7 [2024-05-21 00:16:49] ++ echo 'CentOS Linux 7 (Core)' [2024-05-21 00:16:49] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)' [2024-05-21 00:16:49] + '[' -n 'CentOS Linux 7 (Core)' ']' [2024-05-21 00:16:49] + echo 'systemsoftware=CentOS Linux 7 (Core)' [2024-05-21 00:16:49] + HOME=/scratch/boinc/var/slot8/slots/1 [2024-05-21 00:16:49] + export HOME [2024-05-21 00:16:49] + cd /scratch/boinc/var/slot8/slots/1 [2024-05-21 00:16:49] + '[' '!' -z '' ']' [2024-05-21 00:16:49] + '[' -z '' ']' [2024-05-21 00:16:49] ++ /bin/hostname -f [2024-05-21 00:16:49] + nodename=skurut07.grid.cesnet.cz [2024-05-21 00:16:49] + echo nodename=skurut07.grid.cesnet.cz [2024-05-21 00:16:49] + echo Processors=1 [2024-05-21 00:16:49] + echo Benchmark=HEPSPEC:1.0 [2024-05-21 00:16:49] + executable=./runpilot2-wrapper.sh [2024-05-21 00:16:49] + '[' '!' -f ./runpilot2-wrapper.sh ']' [2024-05-21 00:16:49] ++ dd if=./runpilot2-wrapper.sh count=1 [2024-05-21 00:16:49] ++ head -n 1 [2024-05-21 00:16:49] ++ tr -d '\0' [2024-05-21 00:16:49] + line1='#!/bin/bash' [2024-05-21 00:16:49] ++ echo '#!/bin/bash' [2024-05-21 00:16:49] ++ sed -n 's/^#! *//p' [2024-05-21 00:16:49] + shebang=/bin/bash [2024-05-21 00:16:49] ++ echo /bin/bash [2024-05-21 00:16:49] ++ awk '{print $1}' [2024-05-21 00:16:49] + interpreter=/bin/bash [2024-05-21 00:16:49] + '[' /bin/bash = /usr/bin/env ']' [2024-05-21 00:16:49] + '[' x/bin/bash = x ']' [2024-05-21 00:16:49] + type /bin/bash [2024-05-21 00:16:49] + '[' xgnutime = xgnutime ']' [2024-05-21 00:16:49] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container [2024-05-21 00:16:49] + RESULT=2 [2024-05-21 00:16:49] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-21 00:16:49] ++ grep domain_name init_data.xml [2024-05-21 00:16:49] ++ awk -F '>' '{print $2}' [2024-05-21 00:16:49] ++ awk -F '<' '{print $1}' [2024-05-21 00:16:49] ++ sed -e 's# #_#g' [2024-05-21 00:16:49] + hostname=skurut07.grid.cesnet.cz [2024-05-21 00:16:49] ++ grep user_name init_data.xml [2024-05-21 00:16:49] ++ awk -F '>' '{print $2}' [2024-05-21 00:16:49] ++ awk -F '<' '{print $1}' [2024-05-21 00:16:49] ++ sed -e 's# #_#g' [2024-05-21 00:16:49] + username=praguelcg2 [2024-05-21 00:16:49] + nodename=praguelcg2@skurut07.grid.cesnet.cz [2024-05-21 00:16:49] + echo nodename=praguelcg2@skurut07.grid.cesnet.cz [2024-05-21 00:16:49] + '[' -n 4 ']' [2024-05-21 00:16:49] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-21 00:16:49] + echo exitcode=2 [2024-05-21 00:16:49] + runtimeenvironments= [2024-05-21 00:16:49] + runtimeenvironments='APPS/HEP/ATLAS-SITE;' [2024-05-21 00:16:49] + RTE_function_0 2 [2024-05-21 00:16:49] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-21 00:16:49] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-21 00:16:49] + export BOINC_APP=ATLAS [2024-05-21 00:16:49] + BOINC_APP=ATLAS [2024-05-21 00:16:49] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-21 00:16:49] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-21 00:16:49] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-21 00:16:49] + RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-21 00:16:49] + '[' -z 2 ']' [2024-05-21 00:16:49] + '[' 2 == 1 ']' [2024-05-21 00:16:49] + '[' 0 -ne 0 ']' [2024-05-21 00:16:49] + echo 'zip all output files' [2024-05-21 00:16:49] + flist='*.diag ' [2024-05-21 00:16:49] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-21 00:16:49] + '[' -e ./heartbeat.json ']' [2024-05-21 00:16:49] + flist='*.diag ./heartbeat.json' [2024-05-21 00:16:49] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-21 00:16:49] + '[' -e ./output.list ']' [2024-05-21 00:16:49] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-21 00:16:49] + '[' -e ./log.38776146._012492.job.log.1 ']' [2024-05-21 00:16:49] + flist='*.diag ./heartbeat.json ./log.38776146._012492.job.log.1' [2024-05-21 00:16:49] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-21 00:16:49] + '[' -e ./log.38776146._012492.job.log.1 ']' [2024-05-21 00:16:49] + flist='*.diag ./heartbeat.json ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1' [2024-05-21 00:16:49] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-21 00:16:49] + '[' -e ./gmlog/ ']' [2024-05-21 00:16:49] + '[' -f output.list ']' [2024-05-21 00:16:49] + tar cvf result.tar.gz V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag ./heartbeat.json ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 [2024-05-21 00:16:49] + '[' xgnutime = xcgroup ']' [2024-05-21 00:16:49] + '[' -n '' ']' [2024-05-21 00:16:49] + '[' -n '' ']' [2024-05-21 00:16:49] ++ date +%s [2024-05-21 00:16:49] + ACCOUNTING_ENDTIME=1716243408 [2024-05-21 00:16:49] ++ date -d '1970-01-01 UTC 1716243221 seconds' +%Y%m%d%H%M%SZ [2024-05-21 00:16:49] + echo LRMSStartTime=20240521001341Z [2024-05-21 00:16:49] ++ date -d '1970-01-01 UTC 1716243408 seconds' +%Y%m%d%H%M%SZ [2024-05-21 00:16:49] + echo LRMSEndTime=20240521001648Z [2024-05-21 00:16:49] + echo walltime=187 [2024-05-21 00:16:49] + echo exitcode=2 [2024-05-21 00:16:49] + exit 2 [2024-05-21 00:16:49] ./pilotlog.txt [2024-05-21 00:16:49] ./pilot3/pilot/util/realtimelogger.py [2024-05-21 00:16:49] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc [2024-05-21 00:16:49] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc [2024-05-21 00:16:49] ./pilot3/pilot/util/loggingsupport.py [2024-05-21 00:16:49] ./PanDA_Pilot-6206055791/pilotlog.txt [2024-05-21 00:16:49] ./PanDA_Pilot-6206055791/log.EVNTtoHITS [2024-05-21 00:16:49] ./PanDA_Pilot-6206055791/prmon.log [2024-05-21 00:16:49] ./PanDA_Pilot-6206055791/PoolFileCatalog.xml [2024-05-21 00:16:49] ./log.38776146._012492.job.log.1 [2024-05-21 00:16:49] ./runtime_log.err [2024-05-21 00:16:49] ./runtime_log 07:18:45 (1790194): wrapper (7.7.26015): starting 07:18:45 (1790194): wrapper: running run_atlas (--nthreads 4) [2024-05-26 07:18:45] Arguments: --nthreads 4 [2024-05-26 07:18:45] Threads: 4 [2024-05-26 07:18:45] This job has been restarted, cleaning up previous attempt [2024-05-26 07:18:45] Checking for CVMFS [2024-05-26 07:18:45] No cvmfs_config command found, will try listing directly [2024-05-26 07:18:45] CVMFS is ok [2024-05-26 07:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-26 07:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-26 07:18:45] Further information can be found at the LHC@home message board. [2024-05-26 07:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-26 07:18:45] Checking for apptainer binary... [2024-05-26 07:18:45] which: no apptainer in ((null)) [2024-05-26 07:18:45] apptainer is not installed, using version from CVMFS [2024-05-26 07:18:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-26 07:18:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz [2024-05-26 07:18:46] apptainer works [2024-05-26 07:18:46] Set ATHENA_PROC_NUMBER=4 [2024-05-26 07:18:46] Set ATHENA_CORE_NUMBER=4 [2024-05-26 07:18:46] Starting ATLAS job with PandaID=6206055791 [2024-05-26 07:18:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-05-26 07:21:54] Job failed [2024-05-26 07:21:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/ [2024-05-26 07:21:54] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/ [2024-05-26 07:21:54] + mv ATLAS.root_0 EVNT.38776140._000487.pool.root.1 [2024-05-26 07:21:54] mv: 'ATLAS.root_0' and 'EVNT.38776140._000487.pool.root.1' are the same file [2024-05-26 07:21:54] + tar --strip-components=5 -xvf input.tar.gz [2024-05-26 07:21:54] + umask 077 [2024-05-26 07:21:54] ++ date +%s [2024-05-26 07:21:54] + ACCOUNTING_STARTTIME=1716700726 [2024-05-26 07:21:54] + echo 'Detecting resource accounting method available for the job.' [2024-05-26 07:21:54] Detecting resource accounting method available for the job. [2024-05-26 07:21:54] + JOB_ACCOUNTING= [2024-05-26 07:21:54] + command -v arc-job-cgroup [2024-05-26 07:21:54] + '[' -z '' ']' [2024-05-26 07:21:54] + GNU_TIME=/usr/bin/time [2024-05-26 07:21:54] + echo 'Looking for /usr/bin/time tool for accounting measurements' [2024-05-26 07:21:54] Looking for /usr/bin/time tool for accounting measurements [2024-05-26 07:21:54] + '[' '!' -z /usr/bin/time ']' [2024-05-26 07:21:54] + /usr/bin/time --version [2024-05-26 07:21:54] + echo 'GNU time found and will be used for job accounting.' [2024-05-26 07:21:54] GNU time found and will be used for job accounting. [2024-05-26 07:21:54] + JOB_ACCOUNTING=gnutime [2024-05-26 07:21:54] + '[' -z gnutime ']' [2024-05-26 07:21:54] + export PANDA_JSID=harvester-CERN_central_ACTA [2024-05-26 07:21:54] + PANDA_JSID=harvester-CERN_central_ACTA [2024-05-26 07:21:54] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206055791.out [2024-05-26 07:21:54] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6206055791.out [2024-05-26 07:21:54] + export PILOT_NOKILL=YES [2024-05-26 07:21:54] + PILOT_NOKILL=YES [2024-05-26 07:21:54] + export GRID_GLOBAL_JOBID=V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-26 07:21:54] + GRID_GLOBAL_JOBID=V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-26 07:21:54] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-26 07:21:54] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm [2024-05-26 07:21:54] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest [2024-05-26 07:21:54] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest [2024-05-26 07:21:54] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch [2024-05-26 07:21:54] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/1 [2024-05-26 07:21:54] + RUNTIME_JOB_STDIN=/dev/null [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/1/log.38776146._012492.job.log.1 [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/1/log.38776146._012492.job.log.1 [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1.diag [2024-05-26 07:21:54] + '[' '!' -z '' ']' [2024-05-26 07:21:54] + RUNTIME_LOCAL_SCRATCH_DIR= [2024-05-26 07:21:54] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv [2024-05-26 07:21:54] + RUNTIME_FRONTEND_SEES_NODE= [2024-05-26 07:21:54] + RUNTIME_NODE_SEES_FRONTEND=yes [2024-05-26 07:21:54] + '[' '!' -z '' ']' [2024-05-26 07:21:54] + '[' -z yes ']' [2024-05-26 07:21:54] ++ pwd [2024-05-26 07:21:54] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-26 07:21:54] + runtimeenvironments= [2024-05-26 07:21:54] + runtimeenvironments='APPS/HEP/ATLAS-SITE;' [2024-05-26 07:21:54] + RTE_function_0 1 [2024-05-26 07:21:54] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-26 07:21:54] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-26 07:21:54] + export BOINC_APP=ATLAS [2024-05-26 07:21:54] + BOINC_APP=ATLAS [2024-05-26 07:21:54] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-26 07:21:54] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-26 07:21:54] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-26 07:21:54] + RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-26 07:21:54] + '[' -z 1 ']' [2024-05-26 07:21:54] + '[' 1 == 1 ']' [2024-05-26 07:21:54] + shift [2024-05-26 07:21:54] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)' [2024-05-26 07:21:54] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-26 07:21:54] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)' [2024-05-26 07:21:54] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/ [2024-05-26 07:21:54] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/ [2024-05-26 07:21:54] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']' [2024-05-26 07:21:54] + grep '<use_http_proxy/>' /scratch/boinc/var/slot8/slots/1/init_data.xml [2024-05-26 07:21:54] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']' [2024-05-26 07:21:54] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot8/slots/1/init_data.xml [2024-05-26 07:21:54] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)' [2024-05-26 07:21:54] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-26 07:21:54] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"' [2024-05-26 07:21:54] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-26 07:21:54] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)' [2024-05-26 07:21:54] + '[' 0 -ne 0 ']' [2024-05-26 07:21:54] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;' [2024-05-26 07:21:54] + '[' -f /etc/os-release ']' [2024-05-26 07:21:54] +++ cat /etc/os-release [2024-05-26 07:21:54] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"' [2024-05-26 07:21:54] +++ NAME='CentOS Linux' [2024-05-26 07:21:54] +++ VERSION='7 (Core)' [2024-05-26 07:21:54] +++ ID=centos [2024-05-26 07:21:54] +++ ID_LIKE='rhel fedora' [2024-05-26 07:21:54] +++ VERSION_ID=7 [2024-05-26 07:21:54] +++ PRETTY_NAME='CentOS Linux 7 (Core)' [2024-05-26 07:21:54] +++ ANSI_COLOR='0;31' [2024-05-26 07:21:54] +++ CPE_NAME=cpe:/o:centos:centos:7 [2024-05-26 07:21:54] +++ HOME_URL=https://www.centos.org/ [2024-05-26 07:21:54] +++ BUG_REPORT_URL=https://bugs.centos.org/ [2024-05-26 07:21:54] +++ CENTOS_MANTISBT_PROJECT=CentOS-7 [2024-05-26 07:21:54] +++ CENTOS_MANTISBT_PROJECT_VERSION=7 [2024-05-26 07:21:54] +++ REDHAT_SUPPORT_PRODUCT=centos [2024-05-26 07:21:54] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7 [2024-05-26 07:21:54] ++ echo 'CentOS Linux 7 (Core)' [2024-05-26 07:21:54] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)' [2024-05-26 07:21:54] + '[' -n 'CentOS Linux 7 (Core)' ']' [2024-05-26 07:21:54] + echo 'systemsoftware=CentOS Linux 7 (Core)' [2024-05-26 07:21:54] + HOME=/scratch/boinc/var/slot8/slots/1 [2024-05-26 07:21:54] + export HOME [2024-05-26 07:21:54] + cd /scratch/boinc/var/slot8/slots/1 [2024-05-26 07:21:54] + '[' '!' -z '' ']' [2024-05-26 07:21:54] + '[' -z '' ']' [2024-05-26 07:21:54] ++ /bin/hostname -f [2024-05-26 07:21:54] + nodename=skurut07.grid.cesnet.cz [2024-05-26 07:21:54] + echo nodename=skurut07.grid.cesnet.cz [2024-05-26 07:21:54] + echo Processors=1 [2024-05-26 07:21:54] + echo Benchmark=HEPSPEC:1.0 [2024-05-26 07:21:54] + executable=./runpilot2-wrapper.sh [2024-05-26 07:21:54] + '[' '!' -f ./runpilot2-wrapper.sh ']' [2024-05-26 07:21:54] ++ dd if=./runpilot2-wrapper.sh count=1 [2024-05-26 07:21:54] ++ head -n 1 [2024-05-26 07:21:54] ++ tr -d '\0' [2024-05-26 07:21:54] + line1='#!/bin/bash' [2024-05-26 07:21:54] ++ echo '#!/bin/bash' [2024-05-26 07:21:54] ++ sed -n 's/^#! *//p' [2024-05-26 07:21:54] + shebang=/bin/bash [2024-05-26 07:21:54] ++ echo /bin/bash [2024-05-26 07:21:54] ++ awk '{print $1}' [2024-05-26 07:21:54] + interpreter=/bin/bash [2024-05-26 07:21:54] + '[' /bin/bash = /usr/bin/env ']' [2024-05-26 07:21:54] + '[' x/bin/bash = x ']' [2024-05-26 07:21:54] + type /bin/bash [2024-05-26 07:21:54] + '[' xgnutime = xgnutime ']' [2024-05-26 07:21:54] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container [2024-05-26 07:21:54] + RESULT=2 [2024-05-26 07:21:54] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-26 07:21:54] ++ grep domain_name init_data.xml [2024-05-26 07:21:54] ++ awk -F '>' '{print $2}' [2024-05-26 07:21:54] ++ awk -F '<' '{print $1}' [2024-05-26 07:21:54] ++ sed -e 's# #_#g' [2024-05-26 07:21:54] + hostname=skurut07.grid.cesnet.cz [2024-05-26 07:21:54] ++ grep user_name init_data.xml [2024-05-26 07:21:54] ++ awk -F '>' '{print $2}' [2024-05-26 07:21:54] ++ awk -F '<' '{print $1}' [2024-05-26 07:21:54] ++ sed -e 's# #_#g' [2024-05-26 07:21:54] + username=praguelcg2 [2024-05-26 07:21:54] + nodename=praguelcg2@skurut07.grid.cesnet.cz [2024-05-26 07:21:54] + echo nodename=praguelcg2@skurut07.grid.cesnet.cz [2024-05-26 07:21:54] + '[' -n 4 ']' [2024-05-26 07:21:54] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/1/V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag [2024-05-26 07:21:54] + echo exitcode=2 [2024-05-26 07:21:54] + runtimeenvironments= [2024-05-26 07:21:54] + runtimeenvironments='APPS/HEP/ATLAS-SITE;' [2024-05-26 07:21:54] + RTE_function_0 2 [2024-05-26 07:21:54] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-26 07:21:54] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-05-26 07:21:54] + export BOINC_APP=ATLAS [2024-05-26 07:21:54] + BOINC_APP=ATLAS [2024-05-26 07:21:54] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-26 07:21:54] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-05-26 07:21:54] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-26 07:21:54] + RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-05-26 07:21:54] + '[' -z 2 ']' [2024-05-26 07:21:54] + '[' 2 == 1 ']' [2024-05-26 07:21:54] + '[' 0 -ne 0 ']' [2024-05-26 07:21:54] + echo 'zip all output files' [2024-05-26 07:21:54] + flist='*.diag ' [2024-05-26 07:21:54] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-26 07:21:54] + '[' -e ./heartbeat.json ']' [2024-05-26 07:21:54] + flist='*.diag ./heartbeat.json' [2024-05-26 07:21:54] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-26 07:21:54] + '[' -e ./output.list ']' [2024-05-26 07:21:54] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-26 07:21:54] + '[' -e ./log.38776146._012492.job.log.1 ']' [2024-05-26 07:21:54] + flist='*.diag ./heartbeat.json ./log.38776146._012492.job.log.1' [2024-05-26 07:21:54] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-26 07:21:54] + '[' -e ./log.38776146._012492.job.log.1 ']' [2024-05-26 07:21:54] + flist='*.diag ./heartbeat.json ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1' [2024-05-26 07:21:54] + for f in ./heartbeat.json ./output.list ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 ./gmlog/ [2024-05-26 07:21:54] + '[' -e ./gmlog/ ']' [2024-05-26 07:21:54] + '[' -f output.list ']' [2024-05-26 07:21:54] + tar cvf result.tar.gz V1XKDmfi2Q5nsSi4apGgGQJmABFKDmABFKDm4ySLDm7QMKDm5Bhbcm.diag ./heartbeat.json ./log.38776146._012492.job.log.1 ./log.38776146._012492.job.log.1 [2024-05-26 07:21:54] + '[' xgnutime = xcgroup ']' [2024-05-26 07:21:54] + '[' -n '' ']' [2024-05-26 07:21:54] + '[' -n '' ']' [2024-05-26 07:21:54] ++ date +%s [2024-05-26 07:21:54] + ACCOUNTING_ENDTIME=1716700913 [2024-05-26 07:21:54] ++ date -d '1970-01-01 UTC 1716700726 seconds' +%Y%m%d%H%M%SZ [2024-05-26 07:21:54] + echo LRMSStartTime=20240526071846Z [2024-05-26 07:21:54] ++ date -d '1970-01-01 UTC 1716700913 seconds' +%Y%m%d%H%M%SZ [2024-05-26 07:21:54] + echo LRMSEndTime=20240526072153Z [2024-05-26 07:21:54] + echo walltime=187 [2024-05-26 07:21:54] + echo exitcode=2 [2024-05-26 07:21:54] + exit 2 [2024-05-26 07:21:54] ./pilotlog.txt [2024-05-26 07:21:54] ./pilot3/pilot/util/realtimelogger.py [2024-05-26 07:21:54] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc [2024-05-26 07:21:54] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc [2024-05-26 07:21:54] ./pilot3/pilot/util/loggingsupport.py [2024-05-26 07:21:54] ./PanDA_Pilot-6206055791/pilotlog.txt [2024-05-26 07:21:54] ./PanDA_Pilot-6206055791/log.EVNTtoHITS [2024-05-26 07:21:54] ./PanDA_Pilot-6206055791/prmon.log [2024-05-26 07:21:54] ./PanDA_Pilot-6206055791/PoolFileCatalog.xml [2024-05-26 07:21:54] ./log.38776146._012492.job.log.1 [2024-05-26 07:21:54] ./runtime_log.err [2024-05-26 07:21:54] ./runtime_log 07:31:54 (1790194): run_atlas exited; CPU time 13.821527 07:31:54 (1790194): app exit status: 0x1 07:31:54 (1790194): called boinc_finish(195) </stderr_txt> ]]>
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