Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:26:51 (1781393): wrapper (7.7.26015): starting
07:26:51 (1781393): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 07:26:51] Arguments: --nthreads 4
[2024-05-17 07:26:51] Threads: 4
[2024-05-17 07:26:51] Checking for CVMFS
[2024-05-17 07:26:51] No cvmfs_config command found, will try listing directly
[2024-05-17 07:26:51] CVMFS is ok
[2024-05-17 07:26:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 07:26:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 07:26:51] Further information can be found at the LHC@home message board.
[2024-05-17 07:26:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 07:26:51] Checking for apptainer binary...
[2024-05-17 07:26:51] which: no apptainer in ((null))
[2024-05-17 07:26:51] apptainer is not installed, using version from CVMFS
[2024-05-17 07:26:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 07:26:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-17 07:26:52] apptainer works
[2024-05-17 07:26:52] Set ATHENA_PROC_NUMBER=4
[2024-05-17 07:26:52] Set ATHENA_CORE_NUMBER=4
[2024-05-17 07:26:52] Starting ATLAS job with PandaID=6206042624
[2024-05-17 07:26:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 11:32:15]  *** The last 200 lines of the pilot log: ***
[2024-05-17 11:32:15] 2024-05-17 09:32:00,186 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 11:32:15] 2024-05-17 09:32:00,186 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 11:32:15] 2024-05-17 09:32:00,191 | INFO     | fitting pss+swap vs Time
[2024-05-17 11:32:15] 2024-05-17 09:32:00,191 | INFO     | model: linear, x: [1715923646.0, 1715923707.0, 1715923768.0, 1715923829.0, 1715923890.0, 1715923951.0, 1715924012.0, 1715924073.0, 1715924134.0, 1715924195.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,191 | INFO     | sum of square deviations: 4340323240.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,193 | INFO     | sum of deviations: 85314790807.99995
[2024-05-17 11:32:15] 2024-05-17 09:32:00,193 | INFO     | mean x: 1715930966.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,193 | INFO     | mean y: 2297054.4937759335
[2024-05-17 11:32:15] 2024-05-17 09:32:00,193 | INFO     | -- intersect: -33726594392.139423
[2024-05-17 11:32:15] 2024-05-17 09:32:00,193 | INFO     | intersect: -33726594392.139423
[2024-05-17 11:32:15] 2024-05-17 09:32:00,194 | INFO     | chi2: 4.670600618418944
[2024-05-17 11:32:15] 2024-05-17 09:32:00,194 | INFO     | model: linear, x: [1715923646.0, 1715923707.0, 1715923768.0, 1715923829.0, 1715923890.0, 1715923951.0, 1715924012.0, 1715924073.0, 1715924134.0, 1715924195.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,194 | INFO     | sum of square deviations: 4075741535.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,196 | INFO     | sum of deviations: 98573707589.50002
[2024-05-17 11:32:15] 2024-05-17 09:32:00,196 | INFO     | mean x: 1715930813.5
[2024-05-17 11:32:15] 2024-05-17 09:32:00,196 | INFO     | mean y: 2304547.995762712
[2024-05-17 11:32:15] 2024-05-17 09:32:00,196 | INFO     | -- intersect: -41498281492.910255
[2024-05-17 11:32:15] 2024-05-17 09:32:00,196 | INFO     | intersect: -41498281492.910255
[2024-05-17 11:32:15] 2024-05-17 09:32:00,197 | INFO     | chi2: 3.889305281112114
[2024-05-17 11:32:15] 2024-05-17 09:32:00,197 | INFO     | current chi2=3.889305281112114 (change=16.72794146058475 %)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,197 | INFO     | right removable region: 235
[2024-05-17 11:32:15] 2024-05-17 09:32:00,197 | INFO     | model: linear, x: [1715923951.0, 1715924012.0, 1715924073.0, 1715924134.0, 1715924195.0, 1715924256.0, 1715924317.0, 1715924378.0, 1715924439.0, 1715924500.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,197 | INFO     | sum of square deviations: 4075741535.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,199 | INFO     | sum of deviations: 30228671847.499992
[2024-05-17 11:32:15] 2024-05-17 09:32:00,199 | INFO     | mean x: 1715931118.5
[2024-05-17 11:32:15] 2024-05-17 09:32:00,199 | INFO     | mean y: 2328725.970338983
[2024-05-17 11:32:15] 2024-05-17 09:32:00,199 | INFO     | -- intersect: -12724267955.5462
[2024-05-17 11:32:15] 2024-05-17 09:32:00,199 | INFO     | intersect: -12724267955.5462
[2024-05-17 11:32:15] 2024-05-17 09:32:00,200 | INFO     | chi2: 2.262886087828456
[2024-05-17 11:32:15] 2024-05-17 09:32:00,200 | INFO     | current chi2=2.262886087828456 (change=51.550426321947626 %)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,200 | INFO     | model: linear, x: [1715924256.0, 1715924317.0, 1715924378.0, 1715924439.0, 1715924500.0, 1715924561.0, 1715924622.0, 1715924683.0, 1715924744.0, 1715924805.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,200 | INFO     | sum of square deviations: 3822136780.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,201 | INFO     | sum of deviations: -13563321513.000002
[2024-05-17 11:32:15] 2024-05-17 09:32:00,201 | INFO     | mean x: 1715931271.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,201 | INFO     | mean y: 2355060.930735931
[2024-05-17 11:32:15] 2024-05-17 09:32:00,201 | INFO     | -- intersect: 6091547798.502973
[2024-05-17 11:32:15] 2024-05-17 09:32:00,201 | INFO     | intersect: 6091547798.502973
[2024-05-17 11:32:15] 2024-05-17 09:32:00,202 | INFO     | chi2: 0.8721176146444466
[2024-05-17 11:32:15] 2024-05-17 09:32:00,202 | INFO     | current chi2=0.8721176146444466 (change=61.45994182670675 %)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,202 | INFO     | model: linear, x: [1715924561.0, 1715924622.0, 1715924683.0, 1715924744.0, 1715924805.0, 1715924866.0, 1715924927.0, 1715924988.0, 1715925049.0, 1715925110.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,202 | INFO     | sum of square deviations: 3579276412.5
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | sum of deviations: -18192834498.5
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | mean x: 1715931423.5
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | mean y: 2357933.0221238937
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | -- intersect: 8724136527.569551
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | intersect: 8724136527.569551
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | chi2: 0.8338303545890032
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | current chi2=0.8338303545890032 (change=4.390148692393134 %)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,203 | INFO     | left removable region: 30
[2024-05-17 11:32:15] 2024-05-17 09:32:00,204 | INFO     | model: linear, x: [1715925476.0, 1715925537.0, 1715925598.0, 1715925659.0, 1715925720.0, 1715925781.0, 1715925842.0, 1715925903.0, 1715925964.0, 1715926025.0, 1715
[2024-05-17 11:32:15] 2024-05-17 09:32:00,204 | INFO     | sum of square deviations: 2671343110.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,204 | INFO     | sum of deviations: 435543294.0000006
[2024-05-17 11:32:15] 2024-05-17 09:32:00,204 | INFO     | mean x: 1715931698.0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,204 | INFO     | mean y: 2364278.5414634147
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | -- intersect: -277406051.68239695
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | intersect: -277406051.68239695
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | chi2: 0.010232881058195392
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | -- intersect: -277406051.68239695
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | current memory leak: 0.16 B/s (using 205 data points, chi2=0.01)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | ..............................
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | . Timing measurements:
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | . get job = 0 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | . initial setup = 1 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,205 | INFO     | . payload setup = 5 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,206 | INFO     | . stage-in = 0 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,206 | INFO     | . payload execution = 14663 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,206 | INFO     | . stage-out = 0 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,206 | INFO     | . log creation = 0 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,206 | INFO     | ..............................
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | 
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | job summary report
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | --------------------------------------------------
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | PanDA job id: 6206042624
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | task id: 38920982
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | errors: (none)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,420 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | pilot state: finished 
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | transexitcode: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | exeerrorcode: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | exeerrordiag: 
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | exitcode: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | exitmsg: OK
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | cpuconsumptiontime: 55694 s
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | nevents: 400
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | neventsw: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | pid: 1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | pgrp: 1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | corecount: 4
[2024-05-17 11:32:15] 2024-05-17 09:32:00,421 | INFO     | event service: False
[2024-05-17 11:32:15] 2024-05-17 09:32:00,422 | INFO     | sizes: {0: 2392020, 1: 2392219, 5: 2392425, 11: 2392481, 14672: 2423350, 14673: 2432332, 14677: 2432516, 14683: 2432686}
[2024-05-17 11:32:15] 2024-05-17 09:32:00,422 | INFO     | --------------------------------------------------
[2024-05-17 11:32:15] 2024-05-17 09:32:00,422 | INFO     | 
[2024-05-17 11:32:15] 2024-05-17 09:32:00,422 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/1
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 11:32:15] 2024-05-17 09:32:00,447 | INFO     | job 6206042624 has completed (purged errors)
[2024-05-17 11:32:15] 2024-05-17 09:32:00,448 | INFO     | overall cleanup function is called
[2024-05-17 11:32:15] 2024-05-17 09:32:01,455 | INFO     | --- collectZombieJob: --- 10, [1792865]
[2024-05-17 11:32:15] 2024-05-17 09:32:01,455 | INFO     | zombie collector waiting for pid 1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:01,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 11:32:15] 2024-05-17 09:32:02,456 | INFO     | collected zombie processes
[2024-05-17 11:32:15] 2024-05-17 09:32:02,457 | INFO     | will now attempt to kill all subprocesses of pid=1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:02,616 | INFO     | process IDs to be killed: [1792865] (in reverse order)
[2024-05-17 11:32:15] 2024-05-17 09:32:02,721 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 11:32:15] 2024-05-17 09:32:02,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 11:32:15] 2024-05-17 09:32:02,728 | INFO     | did not find any defunct processes belonging to 1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:02,735 | INFO     | did not find any defunct processes belonging to 1792865
[2024-05-17 11:32:15] 2024-05-17 09:32:02,735 | INFO     | ready for new job
[2024-05-17 11:32:15] 2024-05-17 09:32:02,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 11:32:15] 2024-05-17 09:32:02,736 | INFO     | *************************************
[2024-05-17 11:32:15] 2024-05-17 09:32:02,736 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 11:32:15] 2024-05-17 09:32:02,737 | INFO     | *************************************
[2024-05-17 11:32:15] 2024-05-17 09:32:02,737 | INFO     | 
[2024-05-17 11:32:15] 2024-05-17 09:32:02,739 | INFO     | architecture information:
[2024-05-17 11:32:15] 2024-05-17 09:32:02,740 | INFO     | executing command: cat /etc/os-release
[2024-05-17 11:32:15] 2024-05-17 09:32:02,755 | INFO     | cat /etc/os-release:
[2024-05-17 11:32:15] NAME="CentOS Linux"
[2024-05-17 11:32:15] VERSION="7 (Core)"
[2024-05-17 11:32:15] ID="centos"
[2024-05-17 11:32:15] ID_LIKE="rhel fedora"
[2024-05-17 11:32:15] VERSION_ID="7"
[2024-05-17 11:32:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 11:32:15] ANSI_COLOR="0;31"
[2024-05-17 11:32:15] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 11:32:15] HOME_URL="https://www.centos.org/"
[2024-05-17 11:32:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 11:32:15] 
[2024-05-17 11:32:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 11:32:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 11:32:15] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 11:32:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 11:32:15] 
[2024-05-17 11:32:15] 2024-05-17 09:32:02,755 | INFO     | *************************************
[2024-05-17 11:32:15] 2024-05-17 09:32:03,258 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/1
[2024-05-17 11:32:15] 2024-05-17 09:32:03,278 | INFO     | sufficient remaining disk space (570785005568 B)
[2024-05-17 11:32:15] 2024-05-17 09:32:03,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 11:32:15] 2024-05-17 09:32:03,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 11:32:15] 2024-05-17 09:32:03,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:32:15] 2024-05-17 09:32:03,279 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 11:32:15] 2024-05-17 09:32:03,279 | INFO     | aborting loop
[2024-05-17 11:32:15] 2024-05-17 09:32:03,280 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 11:32:15] 2024-05-17 09:32:03,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 11:32:15] 2024-05-17 09:32:03,280 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 11:32:15] 2024-05-17 09:32:03,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 11:32:15] 2024-05-17 09:32:03,756 | INFO     | all payload control threads have been joined
[2024-05-17 11:32:15] 2024-05-17 09:32:03,900 | INFO     | all data control threads have been joined
[2024-05-17 11:32:15] 2024-05-17 09:32:04,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 11:32:15] 2024-05-17 09:32:04,284 | INFO     | [job] retrieve thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,285 | INFO     | [job] job monitor thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,358 | INFO     | [job] validate thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,554 | INFO     | [payload] validate_post thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,578 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,593 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,708 | INFO     | all job control threads have been joined
[2024-05-17 11:32:15] 2024-05-17 09:32:04,757 | INFO     | [data] copytool_in thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,762 | INFO     | [payload] control thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,902 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:04,905 | INFO     | [data] control thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:05,070 | INFO     | [payload] failed_post thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:05,093 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:05,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 11:32:15] 2024-05-17 09:32:05,505 | INFO     | [data] copytool_out thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:05,710 | INFO     | [job] control thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:06,273 | INFO     | [job] queue monitor thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:08,268 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 11:32:15] 2024-05-17 09:32:09,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47567022797888)>', '<ExcThread(monitor, started 47567194048256)>']
[2024-05-17 11:32:15] 2024-05-17 09:32:09,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 11:32:15] 2024-05-17 09:32:09,306 | INFO     | [monitor] control thread has ended
[2024-05-17 11:32:15] 2024-05-17 09:32:14,161 | INFO     | all workflow threads have been joined
[2024-05-17 11:32:15] 2024-05-17 09:32:14,161 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 11:32:15] 2024-05-17 09:32:14,162 | INFO     | traces error code: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:14,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 11:32:15] 2024-05-17 09:32:14,235 [wrapper] ==== pilot stdout END ====
[2024-05-17 11:32:15] 2024-05-17 09:32:14,242 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 11:32:15] 2024-05-17 09:32:14,244 [wrapper] pilotpid: 1785729
[2024-05-17 11:32:15] 2024-05-17 09:32:14,246 [wrapper] Pilot exit status: 0
[2024-05-17 11:32:15] 2024-05-17 09:32:14,254 [wrapper] pandaids: 6206042624
[2024-05-17 11:32:15] 2024-05-17 09:32:14,342 [wrapper] cleanup: SIGTERM to supervisor_pilot 2377843 1785730
[2024-05-17 11:32:15] 2024-05-17 09:32:14,345 [wrapper] Test setup, not cleaning
[2024-05-17 11:32:15] 2024-05-17 09:32:14,347 [wrapper] ==== wrapper stdout END ====
[2024-05-17 11:32:15] 2024-05-17 09:32:14,350 [wrapper] ==== wrapper stderr END ====
[2024-05-17 11:32:15] 2024-05-17 09:32:14,358 [wrapper] apfmon messages muted
[2024-05-17 11:32:15]  *** Error codes and diagnostics ***
[2024-05-17 11:32:15]     "exeErrorCode": 0,
[2024-05-17 11:32:15]     "exeErrorDiag": "",
[2024-05-17 11:32:15]     "pilotErrorCode": 0,
[2024-05-17 11:32:15]     "pilotErrorDiag": "",
[2024-05-17 11:32:15]  *** Listing of results directory ***
[2024-05-17 11:32:15] total 933992
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc    467845 May 14 08:22 pilot3.tar.gz
[2024-05-17 11:32:15] -rwx------ 1 boinc boinc     32251 May 14 08:25 runpilot2-wrapper.sh
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc      5633 May 14 08:25 queuedata.json
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc       100 May 17 07:26 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 11:32:15] -rwxr-xr-x 1 boinc boinc      7986 May 17 07:26 run_atlas
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc       105 May 17 07:26 job.xml
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc 628616868 May 17 07:26 EVNT.38776160._000038.pool.root.1
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc      6663 May 17 07:26 init_data.xml
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc     17537 May 17 07:26 start_atlas.sh
[2024-05-17 11:32:15] drwxrwx--x 2 boinc boinc      4096 May 17 07:26 shared
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc    479994 May 17 07:26 input.tar.gz
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc         0 May 17 07:26 boinc_lockfile
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc      2622 May 17 07:26 pandaJob.out
[2024-05-17 11:32:15] -rw------- 1 boinc boinc       424 May 17 07:26 setup.sh.local
[2024-05-17 11:32:15] -rw------- 1 boinc boinc   1019364 May 17 07:27 agis_schedconf.cvmfs.json
[2024-05-17 11:32:15] -rw------- 1 boinc boinc   1324701 May 17 07:27 cric_ddmendpoints.json
[2024-05-17 11:32:15] drwx------ 4 boinc boinc      4096 May 17 07:27 pilot3
[2024-05-17 11:32:15] -rw------- 1 boinc boinc 320343324 May 17 11:31 HITS.38920982._000817.pool.root.1
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc       531 May 17 11:31 boinc_task_state.xml
[2024-05-17 11:32:15] -rw------- 1 boinc boinc        95 May 17 11:31 pilot_heartbeat.json
[2024-05-17 11:32:15] -rw------- 1 boinc boinc      1051 May 17 11:31 memory_monitor_summary.json
[2024-05-17 11:32:15] -rw------- 1 boinc boinc         0 May 17 11:31 agis_ddmendpoints.agis.ALL.json
[2024-05-17 11:32:15] -rw------- 1 boinc boinc    360189 May 17 11:31 log.38920982._000817.job.log.tgz.1
[2024-05-17 11:32:15] -rw------- 1 boinc boinc      7762 May 17 11:32 heartbeat.json
[2024-05-17 11:32:15] -rw------- 1 boinc boinc      4344 May 17 11:32 pilotlog.txt
[2024-05-17 11:32:15] -rw------- 1 boinc boinc   1598492 May 17 11:32 log.38920982._000817.job.log.1
[2024-05-17 11:32:15] -rw------- 1 boinc boinc       357 May 17 11:32 output.list
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc       620 May 17 11:32 runtime_log
[2024-05-17 11:32:15] -rw------- 1 boinc boinc   1976320 May 17 11:32 result.tar.gz
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc     11410 May 17 11:32 runtime_log.err
[2024-05-17 11:32:15] -rw------- 1 boinc boinc       658 May 17 11:32 PXLKDm7l0Q5n7Olcko1bjSoqABFKDmABFKDmOtvXDmzvXKDmbCEehn.diag
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc        28 May 17 11:32 wrapper_checkpoint.txt
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc      8192 May 17 11:32 boinc_mmap_file
[2024-05-17 11:32:15] -rw-r--r-- 1 boinc boinc     21348 May 17 11:32 stderr.txt
[2024-05-17 11:32:15] HITS file was successfully produced:
[2024-05-17 11:32:15] -rw------- 1 boinc boinc 320343324 May 17 11:31 shared/HITS.pool.root.1
[2024-05-17 11:32:15]  *** Contents of shared directory: ***
[2024-05-17 11:32:15] total 929152
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc 628616868 May 17 07:26 ATLAS.root_0
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc     17537 May 17 07:26 start_atlas.sh
[2024-05-17 11:32:15] -rw-r--r-- 2 boinc boinc    479994 May 17 07:26 input.tar.gz
[2024-05-17 11:32:15] -rw------- 1 boinc boinc 320343324 May 17 11:31 HITS.pool.root.1
[2024-05-17 11:32:15] -rw------- 1 boinc boinc   1976320 May 17 11:32 result.tar.gz
11:32:16 (1781393): run_atlas exited; CPU time 55361.300781
11:32:16 (1781393): called boinc_finish(0)

</stderr_txt>
]]>

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