Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:50:35 (550946): wrapper (7.7.26015): starting
16:50:35 (550946): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 16:50:35] Arguments: --nthreads 4
[2024-05-16 16:50:35] Threads: 4
[2024-05-16 16:50:35] Checking for CVMFS
[2024-05-16 16:50:35] No cvmfs_config command found, will try listing directly
[2024-05-16 16:50:35] CVMFS is ok
[2024-05-16 16:50:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 16:50:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 16:50:35] Further information can be found at the LHC@home message board.
[2024-05-16 16:50:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 16:50:35] Checking for apptainer binary...
[2024-05-16 16:50:35] which: no apptainer in ((null))
[2024-05-16 16:50:35] apptainer is not installed, using version from CVMFS
[2024-05-16 16:50:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 16:50:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-16 16:50:36] apptainer works
[2024-05-16 16:50:36] Set ATHENA_PROC_NUMBER=4
[2024-05-16 16:50:36] Set ATHENA_CORE_NUMBER=4
[2024-05-16 16:50:36] Starting ATLAS job with PandaID=6206042587
[2024-05-16 16:50:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 21:15:40]  *** The last 200 lines of the pilot log: ***
[2024-05-16 21:15:40] 2024-05-16 19:15:19,895 | INFO     | chi2: 0.6040323864920376
[2024-05-16 21:15:40] 2024-05-16 19:15:19,895 | INFO     | current chi2=0.6040323864920376 (change=70.77699238961112 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,896 | INFO     | model: linear, x: [1715871989.0, 1715872050.0, 1715872111.0, 1715872172.0, 1715872233.0, 1715872294.0, 1715872355.0, 1715872416.0, 1715872477.0, 1715872538.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,896 | INFO     | sum of square deviations: 4560048290.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | sum of deviations: 10358445929.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | mean x: 1715879431.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | mean y: 2353546.567346939
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | -- intersect: -3895378051.0725513
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | intersect: -3895378051.0725513
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | chi2: 0.005734068867434791
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | current chi2=0.005734068867434791 (change=99.05070175115348 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | model: linear, x: [1715872294.0, 1715872355.0, 1715872416.0, 1715872477.0, 1715872538.0, 1715872599.0, 1715872660.0, 1715872721.0, 1715872782.0, 1715872843.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,897 | INFO     | sum of square deviations: 4286517580.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | sum of deviations: 8856475838.5
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | mean x: 1715879583.5
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | mean y: 2354372.0875
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | -- intersect: -3542865212.2080564
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | intersect: -3542865212.2080564
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | chi2: 0.0019855258760564263
[2024-05-16 21:15:40] 2024-05-16 19:15:19,898 | INFO     | current chi2=0.0019855258760564263 (change=65.37317702386304 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,899 | INFO     | model: linear, x: [1715872599.0, 1715872660.0, 1715872721.0, 1715872782.0, 1715872843.0, 1715872904.0, 1715872965.0, 1715873026.0, 1715873087.0, 1715873148.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,899 | INFO     | sum of square deviations: 4024149870.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,899 | INFO     | sum of deviations: 9144102458.999998
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | mean x: 1715879736.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | mean y: 2354204.910638298
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | -- intersect: -3896650707.971959
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | intersect: -3896650707.971959
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | chi2: 0.0014641338285964899
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | current chi2=0.0014641338285964899 (change=26.259645051592322 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | model: linear, x: [1715872904.0, 1715872965.0, 1715873026.0, 1715873087.0, 1715873148.0, 1715873209.0, 1715873270.0, 1715873331.0, 1715873392.0, 1715873453.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,900 | INFO     | sum of square deviations: 3772712597.5
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | sum of deviations: 8208716350.499999
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | mean x: 1715879888.5
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | mean y: 2354775.065217391
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | -- intersect: -3731078645.1104007
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | intersect: -3731078645.1104007
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | chi2: 0.0009677052123252428
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | current chi2=0.0009677052123252428 (change=33.90595904386149 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,901 | INFO     | model: linear, x: [1715873209.0, 1715873270.0, 1715873331.0, 1715873392.0, 1715873453.0, 1715873514.0, 1715873575.0, 1715873636.0, 1715873697.0, 1715873758.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | sum of square deviations: 3531973200.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | sum of deviations: 7204778747.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | mean x: 1715880041.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | mean y: 2355410.671111111
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | -- intersect: -3497822917.9182134
[2024-05-16 21:15:40] 2024-05-16 19:15:19,902 | INFO     | intersect: -3497822917.9182134
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | chi2: 0.0007797764527490269
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | current chi2=0.0007797764527490269 (change=19.42004209367156 %)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | left removable region: 70
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | model: linear, x: [1715875344.0, 1715875405.0, 1715875466.0, 1715875527.0, 1715875588.0, 1715875649.0, 1715875710.0, 1715875771.0, 1715875832.0, 1715875893.0, 1715
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | sum of square deviations: 1931608310.0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | sum of deviations: 3031208888.9999995
[2024-05-16 21:15:40] 2024-05-16 19:15:19,903 | INFO     | mean x: 1715880925.5
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | mean y: 2358320.1304347827
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | -- intersect: -2690316735.632369
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | intersect: -2690316735.632369
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | chi2: 0.000427594419523568
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | -- intersect: -2690316735.632369
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | current memory leak: 1.57 B/s (using 184 data points, chi2=0.00)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | ..............................
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . Timing measurements:
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . get job = 0 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . initial setup = 1 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . payload setup = 6 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . stage-in = 0 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . payload execution = 15839 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . stage-out = 0 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | . log creation = 0 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,904 | INFO     | ..............................
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | 
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | job summary report
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | --------------------------------------------------
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | PanDA job id: 6206042587
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | task id: 38920982
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | errors: (none)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 21:15:40] 2024-05-16 19:15:19,966 | INFO     | pilot state: finished 
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | transexitcode: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | exeerrorcode: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | exeerrordiag: 
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | exitcode: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | exitmsg: OK
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | cpuconsumptiontime: 59754 s
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | nevents: 400
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | neventsw: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | pid: 563243
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | pgrp: 563243
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | corecount: 4
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | event service: False
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | sizes: {0: 2391970, 1: 2392169, 6: 2392375, 11: 2392403, 15850: 2423924, 15851: 2432906, 15853: 2433090, 15858: 2433260}
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | --------------------------------------------------
[2024-05-16 21:15:40] 2024-05-16 19:15:19,967 | INFO     | 
[2024-05-16 21:15:40] 2024-05-16 19:15:19,968 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-16 21:15:40] 2024-05-16 19:15:19,988 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,988 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,988 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,988 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,990 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 21:15:40] 2024-05-16 19:15:19,990 | INFO     | job 6206042587 has completed (purged errors)
[2024-05-16 21:15:40] 2024-05-16 19:15:19,990 | INFO     | overall cleanup function is called
[2024-05-16 21:15:40] 2024-05-16 19:15:20,997 | INFO     | --- collectZombieJob: --- 10, [563243]
[2024-05-16 21:15:40] 2024-05-16 19:15:20,997 | INFO     | zombie collector waiting for pid 563243
[2024-05-16 21:15:40] 2024-05-16 19:15:20,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 21:15:40] 2024-05-16 19:15:22,003 | INFO     | collected zombie processes
[2024-05-16 21:15:40] 2024-05-16 19:15:22,003 | INFO     | will now attempt to kill all subprocesses of pid=563243
[2024-05-16 21:15:40] 2024-05-16 19:15:22,173 | INFO     | process IDs to be killed: [563243] (in reverse order)
[2024-05-16 21:15:40] 2024-05-16 19:15:22,322 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 21:15:40] 2024-05-16 19:15:22,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 21:15:40] 2024-05-16 19:15:22,333 | INFO     | did not find any defunct processes belonging to 563243
[2024-05-16 21:15:40] 2024-05-16 19:15:22,341 | INFO     | did not find any defunct processes belonging to 563243
[2024-05-16 21:15:40] 2024-05-16 19:15:22,342 | INFO     | ready for new job
[2024-05-16 21:15:40] 2024-05-16 19:15:22,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 21:15:40] 2024-05-16 19:15:22,343 | INFO     | *************************************
[2024-05-16 21:15:40] 2024-05-16 19:15:22,343 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 21:15:40] 2024-05-16 19:15:22,344 | INFO     | *************************************
[2024-05-16 21:15:40] 2024-05-16 19:15:22,344 | INFO     | 
[2024-05-16 21:15:40] 2024-05-16 19:15:22,348 | INFO     | architecture information:
[2024-05-16 21:15:40] 2024-05-16 19:15:22,348 | INFO     | executing command: cat /etc/os-release
[2024-05-16 21:15:40] 2024-05-16 19:15:22,366 | INFO     | cat /etc/os-release:
[2024-05-16 21:15:40] NAME="CentOS Linux"
[2024-05-16 21:15:40] VERSION="7 (Core)"
[2024-05-16 21:15:40] ID="centos"
[2024-05-16 21:15:40] ID_LIKE="rhel fedora"
[2024-05-16 21:15:40] VERSION_ID="7"
[2024-05-16 21:15:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 21:15:40] ANSI_COLOR="0;31"
[2024-05-16 21:15:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 21:15:40] HOME_URL="https://www.centos.org/"
[2024-05-16 21:15:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 21:15:40] 
[2024-05-16 21:15:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 21:15:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 21:15:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 21:15:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 21:15:40] 
[2024-05-16 21:15:40] 2024-05-16 19:15:22,366 | INFO     | *************************************
[2024-05-16 21:15:40] 2024-05-16 19:15:22,869 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-16 21:15:40] 2024-05-16 19:15:22,893 | INFO     | sufficient remaining disk space (3019584307200 B)
[2024-05-16 21:15:40] 2024-05-16 19:15:22,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 21:15:40] 2024-05-16 19:15:22,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 21:15:40] 2024-05-16 19:15:22,894 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 21:15:40] 2024-05-16 19:15:22,894 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 21:15:40] 2024-05-16 19:15:22,894 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 21:15:40] 2024-05-16 19:15:22,895 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 21:15:40] 2024-05-16 19:15:23,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 21:15:40] 2024-05-16 19:15:23,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:15:40] 2024-05-16 19:15:23,189 | INFO     | aborting loop
[2024-05-16 21:15:40] 2024-05-16 19:15:23,856 | INFO     | all data control threads have been joined
[2024-05-16 21:15:40] 2024-05-16 19:15:23,899 | INFO     | [job] retrieve thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:23,902 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,024 | INFO     | [payload] validate_post thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,078 | INFO     | all payload control threads have been joined
[2024-05-16 21:15:40] 2024-05-16 19:15:24,079 | INFO     | all job control threads have been joined
[2024-05-16 21:15:40] 2024-05-16 19:15:24,144 | INFO     | [data] copytool_in thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,194 | INFO     | [job] job monitor thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,729 | INFO     | [job] validate thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,739 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,862 | INFO     | [data] control thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,874 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:24,975 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:15:40] 2024-05-16 19:15:25,083 | INFO     | [payload] control thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:25,085 | INFO     | [job] control thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:25,184 | INFO     | [data] copytool_out thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:25,439 | INFO     | [payload] failed_post thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:25,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 21:15:40] 2024-05-16 19:15:25,980 | INFO     | [job] queue monitor thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:29,922 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:33,400 | INFO     | job.realtimelogging is not enabled
[2024-05-16 21:15:40] 2024-05-16 19:15:34,407 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 21:15:40] 2024-05-16 19:15:35,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47412821673024)>', '<ExcThread(monitor, started 47412990822144)>']
[2024-05-16 21:15:40] 2024-05-16 19:15:35,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 21:15:40] 2024-05-16 19:15:35,959 | INFO     | [monitor] control thread has ended
[2024-05-16 21:15:40] 2024-05-16 19:15:40,057 | INFO     | all workflow threads have been joined
[2024-05-16 21:15:40] 2024-05-16 19:15:40,057 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 21:15:40] 2024-05-16 19:15:40,058 | INFO     | traces error code: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:40,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 21:15:40] 2024-05-16 19:15:40,126 [wrapper] ==== pilot stdout END ====
[2024-05-16 21:15:40] 2024-05-16 19:15:40,128 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 21:15:40] 2024-05-16 19:15:40,129 [wrapper] pilotpid: 555619
[2024-05-16 21:15:40] 2024-05-16 19:15:40,131 [wrapper] Pilot exit status: 0
[2024-05-16 21:15:40] 2024-05-16 19:15:40,143 [wrapper] pandaids: 6206042587
[2024-05-16 21:15:40] 2024-05-16 19:15:40,219 [wrapper] cleanup: SIGTERM to supervisor_pilot 2061841 555620
[2024-05-16 21:15:40] 2024-05-16 19:15:40,222 [wrapper] Test setup, not cleaning
[2024-05-16 21:15:40] 2024-05-16 19:15:40,225 [wrapper] ==== wrapper stdout END ====
[2024-05-16 21:15:40] 2024-05-16 19:15:40,228 [wrapper] ==== wrapper stderr END ====
[2024-05-16 21:15:40] 2024-05-16 19:15:40,236 [wrapper] apfmon messages muted
[2024-05-16 21:15:40]  *** Error codes and diagnostics ***
[2024-05-16 21:15:40]     "exeErrorCode": 0,
[2024-05-16 21:15:40]     "exeErrorDiag": "",
[2024-05-16 21:15:40]     "pilotErrorCode": 0,
[2024-05-16 21:15:40]     "pilotErrorDiag": "",
[2024-05-16 21:15:40]  *** Listing of results directory ***
[2024-05-16 21:15:40] total 919164
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc    467845 May 14 08:06 pilot3.tar.gz
[2024-05-16 21:15:40] -rwx------ 1 boinc boinc     32251 May 14 08:21 runpilot2-wrapper.sh
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc      5633 May 14 08:21 queuedata.json
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc       100 May 16 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 21:15:40] -rwxr-xr-x 1 boinc boinc      7986 May 16 16:50 run_atlas
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc       105 May 16 16:50 job.xml
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc     17537 May 16 16:50 start_atlas.sh
[2024-05-16 21:15:40] drwxrwx--x 2 boinc boinc      4096 May 16 16:50 shared
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc    479993 May 16 16:50 input.tar.gz
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc      6644 May 16 16:50 init_data.xml
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc 628666041 May 16 16:50 EVNT.38776160._000037.pool.root.1
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc         0 May 16 16:50 boinc_lockfile
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc      2622 May 16 16:50 pandaJob.out
[2024-05-16 21:15:40] -rw------- 1 boinc boinc       424 May 16 16:50 setup.sh.local
[2024-05-16 21:15:40] -rw------- 1 boinc boinc   1018974 May 16 16:50 agis_schedconf.cvmfs.json
[2024-05-16 21:15:40] -rw------- 1 boinc boinc   1324701 May 16 16:50 cric_ddmendpoints.json
[2024-05-16 21:15:40] drwx------ 4 boinc boinc      4096 May 16 16:50 pilot3
[2024-05-16 21:15:40] -rw------- 1 boinc boinc        95 May 16 21:14 pilot_heartbeat.json
[2024-05-16 21:15:40] -rw------- 1 boinc boinc 304739491 May 16 21:14 HITS.38920982._000780.pool.root.1
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc       531 May 16 21:14 boinc_task_state.xml
[2024-05-16 21:15:40] -rw------- 1 boinc boinc      1042 May 16 21:15 memory_monitor_summary.json
[2024-05-16 21:15:40] -rw------- 1 boinc boinc         0 May 16 21:15 agis_ddmendpoints.agis.ALL.json
[2024-05-16 21:15:40] -rw------- 1 boinc boinc    357907 May 16 21:15 log.38920982._000780.job.log.tgz.1
[2024-05-16 21:15:40] -rw------- 1 boinc boinc      7716 May 16 21:15 heartbeat.json
[2024-05-16 21:15:40] -rw------- 1 boinc boinc      4417 May 16 21:15 pilotlog.txt
[2024-05-16 21:15:40] -rw------- 1 boinc boinc   1782182 May 16 21:15 log.38920982._000780.job.log.1
[2024-05-16 21:15:40] -rw------- 1 boinc boinc       357 May 16 21:15 output.list
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc       620 May 16 21:15 runtime_log
[2024-05-16 21:15:40] -rw------- 1 boinc boinc   2160640 May 16 21:15 result.tar.gz
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc     11410 May 16 21:15 runtime_log.err
[2024-05-16 21:15:40] -rw------- 1 boinc boinc       658 May 16 21:15 ddCLDmHi0Q5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmM0HKDmJ1U97m.diag
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc      8192 May 16 21:15 boinc_mmap_file
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc        28 May 16 21:15 wrapper_checkpoint.txt
[2024-05-16 21:15:40] -rw-r--r-- 1 boinc boinc     21402 May 16 21:15 stderr.txt
[2024-05-16 21:15:40] HITS file was successfully produced:
[2024-05-16 21:15:40] -rw------- 1 boinc boinc 304739491 May 16 21:14 shared/HITS.pool.root.1
[2024-05-16 21:15:40]  *** Contents of shared directory: ***
[2024-05-16 21:15:40] total 914144
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc     17537 May 16 16:50 start_atlas.sh
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc    479993 May 16 16:50 input.tar.gz
[2024-05-16 21:15:40] -rw-r--r-- 2 boinc boinc 628666041 May 16 16:50 ATLAS.root_0
[2024-05-16 21:15:40] -rw------- 1 boinc boinc 304739491 May 16 21:14 HITS.pool.root.1
[2024-05-16 21:15:40] -rw------- 1 boinc boinc   2160640 May 16 21:15 result.tar.gz
21:15:42 (550946): run_atlas exited; CPU time 59138.823256
21:15:42 (550946): called boinc_finish(0)

</stderr_txt>
]]>

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