Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:41:39 (1090227): wrapper (7.7.26015): starting
03:41:39 (1090227): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 03:41:39] Arguments: --nthreads 4
[2024-05-18 03:41:39] Threads: 4
[2024-05-18 03:41:39] Checking for CVMFS
[2024-05-18 03:41:39] No cvmfs_config command found, will try listing directly
[2024-05-18 03:41:39] CVMFS is ok
[2024-05-18 03:41:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 03:41:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 03:41:39] Further information can be found at the LHC@home message board.
[2024-05-18 03:41:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 03:41:39] Checking for apptainer binary...
[2024-05-18 03:41:39] which: no apptainer in ((null))
[2024-05-18 03:41:39] apptainer is not installed, using version from CVMFS
[2024-05-18 03:41:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 03:41:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-18 03:41:40] apptainer works
[2024-05-18 03:41:40] Set ATHENA_PROC_NUMBER=4
[2024-05-18 03:41:40] Set ATHENA_CORE_NUMBER=4
[2024-05-18 03:41:40] Starting ATLAS job with PandaID=6206018269
[2024-05-18 03:41:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 05:59:14]  *** The last 200 lines of the pilot log: ***
[2024-05-18 05:59:14] 2024-05-18 03:58:52,073 | INFO     | fitting pss+swap vs Time
[2024-05-18 05:59:14] 2024-05-18 03:58:52,073 | INFO     | model: linear, x: [1715996536.0, 1715996597.0, 1715996658.0, 1715996719.0, 1715996780.0, 1715996841.0, 1715996902.0, 1715996963.0, 1715997024.0, 1715997085.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,073 | INFO     | sum of square deviations: 762879420.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | sum of deviations: 36532158545.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | mean x: 1716000623.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | mean y: 2254073.3333333335
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | -- intersect: -82172209123.9499
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | intersect: -82172209123.9499
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | chi2: 4.225201769755568
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | model: linear, x: [1715996536.0, 1715996597.0, 1715996658.0, 1715996719.0, 1715996780.0, 1715996841.0, 1715996902.0, 1715996963.0, 1715997024.0, 1715997085.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,074 | INFO     | sum of square deviations: 681212772.5
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | sum of deviations: 43122709900.50001
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | mean x: 1716000470.5
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | mean y: 2265916.176923077
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | -- intersect: -108625454328.88501
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | intersect: -108625454328.88501
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | chi2: 3.4925170461257995
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | current chi2=3.4925170461257995 (change=17.340822132434045 %)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | right removable region: 129
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | model: linear, x: [1715996841.0, 1715996902.0, 1715996963.0, 1715997024.0, 1715997085.0, 1715997146.0, 1715997207.0, 1715997268.0, 1715997329.0, 1715997390.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,075 | INFO     | sum of square deviations: 681212772.5
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | sum of deviations: 7760963906.500003
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | mean x: 1716000775.5
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | mean y: 2307501.6384615386
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | -- intersect: -19547854532.620102
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | intersect: -19547854532.620102
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | chi2: 1.9287988465715333
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | current chi2=1.9287988465715333 (change=54.35013635613628 %)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | model: linear, x: [1715997146.0, 1715997207.0, 1715997268.0, 1715997329.0, 1715997390.0, 1715997451.0, 1715997512.0, 1715997573.0, 1715997634.0, 1715997695.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,076 | INFO     | sum of square deviations: 605592750.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | sum of deviations: -12866335574.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | mean x: 1716000928.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | mean y: 2349111.464
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | -- intersect: 36460255493.17582
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | intersect: 36460255493.17582
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | chi2: 0.8452332592064893
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | current chi2=0.8452332592064893 (change=56.178257742692914 %)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | model: linear, x: [1715997451.0, 1715997512.0, 1715997573.0, 1715997634.0, 1715997695.0, 1715997756.0, 1715997817.0, 1715997878.0, 1715997939.0, 1715998000.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,077 | INFO     | sum of square deviations: 535786790.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | sum of deviations: -10989571662.499998
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | mean x: 1716001080.5
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | mean y: 2344842.091666667
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | -- intersect: 35199399340.35987
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | intersect: 35199399340.35987
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | chi2: 0.8080603435898379
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | current chi2=0.8080603435898379 (change=4.397947573850745 %)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | left removable region: 30
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | model: linear, x: [1715998366.0, 1715998427.0, 1715998488.0, 1715998549.0, 1715998610.0, 1715998671.0, 1715998732.0, 1715998793.0, 1715998854.0, 1715998915.0, 1715
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | sum of square deviations: 300842850.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | sum of deviations: 1031164801.0000001
[2024-05-18 05:59:14] 2024-05-18 03:58:52,078 | INFO     | mean x: 1716001355.0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | mean y: 2349805.292929293
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | -- intersect: -5879392758.122839
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | intersect: -5879392758.122839
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | chi2: 7.407730098530625e-05
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | -- intersect: -5879392758.122839
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | current memory leak: 3.43 B/s (using 99 data points, chi2=0.00)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | ..............................
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | . Timing measurements:
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | . get job = 0 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | . initial setup = 1 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | . payload setup = 5 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,079 | INFO     | . stage-in = 0 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,080 | INFO     | . payload execution = 8188 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,080 | INFO     | . stage-out = 0 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,080 | INFO     | . log creation = 0 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,080 | INFO     | ..............................
[2024-05-18 05:59:14] 2024-05-18 03:58:52,133 | INFO     | 
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | job summary report
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | --------------------------------------------------
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | PanDA job id: 6206018269
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | task id: 38776125
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | errors: (none)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | pilot state: finished 
[2024-05-18 05:59:14] 2024-05-18 03:58:52,134 | INFO     | transexitcode: 0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,137 | INFO     | exeerrorcode: 0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,137 | INFO     | exeerrordiag: 
[2024-05-18 05:59:14] 2024-05-18 03:58:52,137 | INFO     | exitcode: 0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,137 | INFO     | exitmsg: OK
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | cpuconsumptiontime: 30233 s
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | nevents: 400
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | neventsw: 0
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | pid: 1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | pgrp: 1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | corecount: 4
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | event service: False
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | sizes: {0: 2392206, 4: 2392412, 11: 2392440, 8197: 2420246, 8198: 2420245, 8199: 2429283, 8201: 2429467, 8206: 2429637}
[2024-05-18 05:59:14] 2024-05-18 03:58:52,138 | INFO     | --------------------------------------------------
[2024-05-18 05:59:14] 2024-05-18 03:58:52,139 | INFO     | 
[2024-05-18 05:59:14] 2024-05-18 03:58:52,139 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 05:59:14] 2024-05-18 03:58:52,164 | INFO     | job 6206018269 has completed (purged errors)
[2024-05-18 05:59:14] 2024-05-18 03:58:52,165 | INFO     | overall cleanup function is called
[2024-05-18 05:59:14] 2024-05-18 03:58:53,172 | INFO     | --- collectZombieJob: --- 10, [1101615]
[2024-05-18 05:59:14] 2024-05-18 03:58:53,172 | INFO     | zombie collector waiting for pid 1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:53,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 05:59:14] 2024-05-18 03:58:54,178 | INFO     | collected zombie processes
[2024-05-18 05:59:14] 2024-05-18 03:58:54,178 | INFO     | will now attempt to kill all subprocesses of pid=1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:54,372 | INFO     | process IDs to be killed: [1101615] (in reverse order)
[2024-05-18 05:59:14] 2024-05-18 03:58:54,513 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 05:59:14] 2024-05-18 03:58:54,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 05:59:14] 2024-05-18 03:58:54,521 | INFO     | did not find any defunct processes belonging to 1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:54,528 | INFO     | did not find any defunct processes belonging to 1101615
[2024-05-18 05:59:14] 2024-05-18 03:58:54,528 | INFO     | ready for new job
[2024-05-18 05:59:14] 2024-05-18 03:58:54,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 05:59:14] 2024-05-18 03:58:54,530 | INFO     | *************************************
[2024-05-18 05:59:14] 2024-05-18 03:58:54,530 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 05:59:14] 2024-05-18 03:58:54,530 | INFO     | *************************************
[2024-05-18 05:59:14] 2024-05-18 03:58:54,530 | INFO     | 
[2024-05-18 05:59:14] 2024-05-18 03:58:54,534 | INFO     | architecture information:
[2024-05-18 05:59:14] 2024-05-18 03:58:54,534 | INFO     | executing command: cat /etc/os-release
[2024-05-18 05:59:14] 2024-05-18 03:58:54,555 | INFO     | cat /etc/os-release:
[2024-05-18 05:59:14] NAME="CentOS Linux"
[2024-05-18 05:59:14] VERSION="7 (Core)"
[2024-05-18 05:59:14] ID="centos"
[2024-05-18 05:59:14] ID_LIKE="rhel fedora"
[2024-05-18 05:59:14] VERSION_ID="7"
[2024-05-18 05:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 05:59:14] ANSI_COLOR="0;31"
[2024-05-18 05:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 05:59:14] HOME_URL="https://www.centos.org/"
[2024-05-18 05:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 05:59:14] 
[2024-05-18 05:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 05:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 05:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 05:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 05:59:14] 
[2024-05-18 05:59:14] 2024-05-18 03:58:54,556 | INFO     | *************************************
[2024-05-18 05:59:14] 2024-05-18 03:58:55,059 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-18 05:59:14] 2024-05-18 03:58:55,086 | INFO     | sufficient remaining disk space (581521375232 B)
[2024-05-18 05:59:14] 2024-05-18 03:58:55,087 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 05:59:14] 2024-05-18 03:58:55,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 05:59:14] 2024-05-18 03:58:55,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 05:59:14] 2024-05-18 03:58:55,497 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 05:59:14] 2024-05-18 03:58:55,497 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 05:59:14] 2024-05-18 03:58:55,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:59:14] 2024-05-18 03:58:55,498 | INFO     | will abort loop
[2024-05-18 05:59:14] 2024-05-18 03:58:55,748 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 05:59:14] 2024-05-18 03:58:55,749 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 05:59:14] 2024-05-18 03:58:55,749 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 05:59:14] 2024-05-18 03:58:55,949 | INFO     | all data control threads have been joined
[2024-05-18 05:59:14] 2024-05-18 03:58:56,051 | INFO     | all payload control threads have been joined
[2024-05-18 05:59:14] 2024-05-18 03:58:56,093 | INFO     | [job] retrieve thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,100 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,127 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,187 | INFO     | [payload] validate_post thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,441 | INFO     | [data] copytool_in thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,503 | INFO     | [job] job monitor thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,530 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:56,765 | INFO     | all job control threads have been joined
[2024-05-18 05:59:14] 2024-05-18 03:58:56,955 | INFO     | [data] control thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:57,056 | INFO     | [payload] control thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:57,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 05:59:14] 2024-05-18 03:58:57,178 | INFO     | [payload] failed_post thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:57,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 05:59:14] 2024-05-18 03:58:57,265 | INFO     | [job] validate thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:57,421 | INFO     | [data] copytool_out thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:57,772 | INFO     | [job] control thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:58:58,150 | INFO     | [job] queue monitor thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:59:01,203 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:59:05,929 | INFO     | job.realtimelogging is not enabled
[2024-05-18 05:59:14] 2024-05-18 03:59:06,935 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 05:59:14] 2024-05-18 03:59:08,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47278835385408)>', '<ExcThread(monitor, started 47279209723648)>']
[2024-05-18 05:59:14] 2024-05-18 03:59:09,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 05:59:14] 2024-05-18 03:59:09,816 | INFO     | [monitor] control thread has ended
[2024-05-18 05:59:14] 2024-05-18 03:59:13,976 | INFO     | all workflow threads have been joined
[2024-05-18 05:59:14] 2024-05-18 03:59:13,977 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 05:59:14] 2024-05-18 03:59:13,977 | INFO     | traces error code: 0
[2024-05-18 05:59:14] 2024-05-18 03:59:13,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 05:59:14] 2024-05-18 03:59:14,089 [wrapper] ==== pilot stdout END ====
[2024-05-18 05:59:14] 2024-05-18 03:59:14,093 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 05:59:14] 2024-05-18 03:59:14,097 [wrapper] pilotpid: 1094571
[2024-05-18 05:59:14] 2024-05-18 03:59:14,101 [wrapper] Pilot exit status: 0
[2024-05-18 05:59:14] 2024-05-18 03:59:14,113 [wrapper] pandaids: 6206018269
[2024-05-18 05:59:14] 2024-05-18 03:59:14,200 [wrapper] cleanup: SIGTERM to supervisor_pilot 1323519 1094572
[2024-05-18 05:59:14] 2024-05-18 03:59:14,204 [wrapper] Test setup, not cleaning
[2024-05-18 05:59:14] 2024-05-18 03:59:14,207 [wrapper] ==== wrapper stdout END ====
[2024-05-18 05:59:14] 2024-05-18 03:59:14,210 [wrapper] ==== wrapper stderr END ====
[2024-05-18 05:59:14] 2024-05-18 03:59:14,215 [wrapper] apfmon messages muted
[2024-05-18 05:59:14]  *** Error codes and diagnostics ***
[2024-05-18 05:59:14]     "exeErrorCode": 0,
[2024-05-18 05:59:14]     "exeErrorDiag": "",
[2024-05-18 05:59:14]     "pilotErrorCode": 0,
[2024-05-18 05:59:14]     "pilotErrorDiag": "",
[2024-05-18 05:59:14]  *** Listing of results directory ***
[2024-05-18 05:59:14] total 830852
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc    467845 May 14 06:43 pilot3.tar.gz
[2024-05-18 05:59:14] -rwx------ 1 boinc boinc     32251 May 14 06:46 runpilot2-wrapper.sh
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc      5633 May 14 06:46 queuedata.json
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc       100 May 18 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 05:59:14] -rwxr-xr-x 1 boinc boinc      7986 May 18 03:41 run_atlas
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc       105 May 18 03:41 job.xml
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc      6663 May 18 03:41 init_data.xml
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc 600483159 May 18 03:41 EVNT.38776119._000326.pool.root.1
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc     17537 May 18 03:41 start_atlas.sh
[2024-05-18 05:59:14] drwxrwx--x 2 boinc boinc      4096 May 18 03:41 shared
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc    480009 May 18 03:41 input.tar.gz
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc         0 May 18 03:41 boinc_lockfile
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc      2637 May 18 03:41 pandaJob.out
[2024-05-18 05:59:14] -rw------- 1 boinc boinc       424 May 18 03:41 setup.sh.local
[2024-05-18 05:59:14] -rw------- 1 boinc boinc   1019073 May 18 03:41 agis_schedconf.cvmfs.json
[2024-05-18 05:59:14] -rw------- 1 boinc boinc         0 May 18 03:41 agis_ddmendpoints.agis.ALL.json
[2024-05-18 05:59:14] -rw------- 1 boinc boinc   1324701 May 18 03:41 cric_ddmendpoints.json
[2024-05-18 05:59:14] drwx------ 4 boinc boinc      4096 May 18 03:41 pilot3
[2024-05-18 05:59:14] -rw------- 1 boinc boinc        95 May 18 05:58 pilot_heartbeat.json
[2024-05-18 05:59:14] -rw------- 1 boinc boinc 244515494 May 18 05:58 HITS.38776125._009304.pool.root.1
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc       530 May 18 05:58 boinc_task_state.xml
[2024-05-18 05:59:14] -rw------- 1 boinc boinc      1049 May 18 05:58 memory_monitor_summary.json
[2024-05-18 05:59:14] -rw------- 1 boinc boinc    266924 May 18 05:58 log.38776125._009304.job.log.tgz.1
[2024-05-18 05:59:14] -rw------- 1 boinc boinc      7768 May 18 05:58 heartbeat.json
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc        27 May 18 05:59 wrapper_checkpoint.txt
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc      8192 May 18 05:59 boinc_mmap_file
[2024-05-18 05:59:14] -rw------- 1 boinc boinc      4479 May 18 05:59 pilotlog.txt
[2024-05-18 05:59:14] -rw------- 1 boinc boinc    860215 May 18 05:59 log.38776125._009304.job.log.1
[2024-05-18 05:59:14] -rw------- 1 boinc boinc       357 May 18 05:59 output.list
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc       620 May 18 05:59 runtime_log
[2024-05-18 05:59:14] -rw------- 1 boinc boinc   1146880 May 18 05:59 result.tar.gz
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc     11409 May 18 05:59 runtime_log.err
[2024-05-18 05:59:14] -rw------- 1 boinc boinc       653 May 18 05:59 8w6MDmWEzQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmi9LKDmHww67n.diag
[2024-05-18 05:59:14] -rw-r--r-- 1 boinc boinc     21308 May 18 05:59 stderr.txt
[2024-05-18 05:59:14] HITS file was successfully produced:
[2024-05-18 05:59:14] -rw------- 1 boinc boinc 244515494 May 18 05:58 shared/HITS.pool.root.1
[2024-05-18 05:59:14]  *** Contents of shared directory: ***
[2024-05-18 05:59:14] total 826820
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc 600483159 May 18 03:41 ATLAS.root_0
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc     17537 May 18 03:41 start_atlas.sh
[2024-05-18 05:59:14] -rw-r--r-- 2 boinc boinc    480009 May 18 03:41 input.tar.gz
[2024-05-18 05:59:14] -rw------- 1 boinc boinc 244515494 May 18 05:58 HITS.pool.root.1
[2024-05-18 05:59:14] -rw------- 1 boinc boinc   1146880 May 18 05:59 result.tar.gz
05:59:16 (1090227): run_atlas exited; CPU time 30055.981386
05:59:16 (1090227): called boinc_finish(0)

</stderr_txt>
]]>

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