Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:38 (1309644): wrapper (7.7.26015): starting
13:30:38 (1309644): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 13:30:38] Arguments: --nthreads 4
[2024-05-16 13:30:38] Threads: 4
[2024-05-16 13:30:38] Checking for CVMFS
[2024-05-16 13:30:38] No cvmfs_config command found, will try listing directly
[2024-05-16 13:30:38] CVMFS is ok
[2024-05-16 13:30:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 13:30:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 13:30:38] Further information can be found at the LHC@home message board.
[2024-05-16 13:30:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 13:30:38] Checking for apptainer binary...
[2024-05-16 13:30:38] which: no apptainer in ((null))
[2024-05-16 13:30:38] apptainer is not installed, using version from CVMFS
[2024-05-16 13:30:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 13:30:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-16 13:30:39] apptainer works
[2024-05-16 13:30:39] Set ATHENA_PROC_NUMBER=4
[2024-05-16 13:30:39] Set ATHENA_CORE_NUMBER=4
[2024-05-16 13:30:39] Starting ATLAS job with PandaID=6206009688
[2024-05-16 13:30:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:25:25]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:25:25] 2024-05-16 15:25:11,705 | INFO     | -- intersect: -47922985357.162346
[2024-05-16 17:25:25] 2024-05-16 15:25:11,705 | INFO     | intersect: -47922985357.162346
[2024-05-16 17:25:25] 2024-05-16 15:25:11,705 | INFO     | chi2: 4.132399163710512
[2024-05-16 17:25:25] 2024-05-16 15:25:11,705 | INFO     | model: linear, x: [1715859077.0, 1715859138.0, 1715859199.0, 1715859260.0, 1715859321.0, 1715859382.0, 1715859443.0, 1715859504.0, 1715859565.0, 1715859626.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,705 | INFO     | sum of square deviations: 3531973200.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,706 | INFO     | sum of deviations: 102878864176.99998
[2024-05-16 17:25:25] 2024-05-16 15:25:11,706 | INFO     | mean x: 1715865909.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,706 | INFO     | mean y: 2285680.1022222224
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | -- intersect: -49977237323.627144
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | intersect: -49977237323.627144
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | chi2: 4.132603980578675
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | current chi2=4.132603980578675 (change=-0.004956366992839864 %)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | right removable region: 224
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | model: linear, x: [1715859382.0, 1715859443.0, 1715859504.0, 1715859565.0, 1715859626.0, 1715859687.0, 1715859748.0, 1715859809.0, 1715859870.0, 1715859931.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,707 | INFO     | sum of square deviations: 3531973200.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,708 | INFO     | sum of deviations: 51500865646.00001
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | mean x: 1715866214.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | mean y: 2321308.8711111112
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | -- intersect: -25017289642.232563
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | intersect: -25017289642.232563
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | chi2: 1.6049382200359372
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | current chi2=1.6049382200359372 (change=61.16207180250102 %)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,709 | INFO     | model: linear, x: [1715859687.0, 1715859748.0, 1715859809.0, 1715859870.0, 1715859931.0, 1715859992.0, 1715860053.0, 1715860114.0, 1715860175.0, 1715860236.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,710 | INFO     | sum of square deviations: 3301699115.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,711 | INFO     | sum of deviations: 7594005411.999999
[2024-05-16 17:25:25] 2024-05-16 15:25:11,711 | INFO     | mean x: 1715866366.5
[2024-05-16 17:25:25] 2024-05-16 15:25:11,711 | INFO     | mean y: 2350389.381818182
[2024-05-16 17:25:25] 2024-05-16 15:25:11,711 | INFO     | -- intersect: -3944192896.246973
[2024-05-16 17:25:25] 2024-05-16 15:25:11,711 | INFO     | intersect: -3944192896.246973
[2024-05-16 17:25:25] 2024-05-16 15:25:11,712 | INFO     | chi2: 0.060990905893035526
[2024-05-16 17:25:25] 2024-05-16 15:25:11,712 | INFO     | current chi2=0.060990905893035526 (change=96.19979727994328 %)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,712 | INFO     | model: linear, x: [1715859992.0, 1715860053.0, 1715860114.0, 1715860175.0, 1715860236.0, 1715860297.0, 1715860358.0, 1715860419.0, 1715860480.0, 1715860541.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,712 | INFO     | sum of square deviations: 3081657780.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,713 | INFO     | sum of deviations: 671516547.9999996
[2024-05-16 17:25:25] 2024-05-16 15:25:11,713 | INFO     | mean x: 1715866519.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | mean y: 2355147.6790697672
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | -- intersect: -371545150.12351614
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | intersect: -371545150.12351614
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | chi2: 0.0038062420852039754
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | current chi2=0.0038062420852039754 (change=93.75932849418686 %)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | model: linear, x: [1715860297.0, 1715860358.0, 1715860419.0, 1715860480.0, 1715860541.0, 1715860602.0, 1715860663.0, 1715860724.0, 1715860785.0, 1715860846.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,714 | INFO     | sum of square deviations: 2871616632.5
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | sum of deviations: -7128612.500000171
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | mean x: 1715866671.5
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | mean y: 2355636.776190476
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | -- intersect: 6615170.748919891
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | intersect: 6615170.748919891
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | chi2: 0.0033040656633594946
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | current chi2=0.0033040656633594946 (change=13.193496645854289 %)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,716 | INFO     | left removable region: 40
[2024-05-16 17:25:25] 2024-05-16 15:25:11,717 | INFO     | model: linear, x: [1715861517.0, 1715861578.0, 1715861639.0, 1715861700.0, 1715861761.0, 1715861822.0, 1715861883.0, 1715861944.0, 1715862005.0, 1715862066.0, 1715
[2024-05-16 17:25:25] 2024-05-16 15:25:11,717 | INFO     | sum of square deviations: 1931608310.0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | sum of deviations: 1271989293.5
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | mean x: 1715867098.5
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | mean y: 2354276.2989130435
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | -- intersect: -1127566612.4556553
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | intersect: -1127566612.4556553
[2024-05-16 17:25:25] 2024-05-16 15:25:11,718 | INFO     | chi2: 0.0021253715483826874
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | -- intersect: -1127566612.4556553
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | current memory leak: 0.66 B/s (using 184 data points, chi2=0.00)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | ..............................
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . Timing measurements:
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . get job = 0 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . initial setup = 1 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . payload setup = 6 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . stage-in = 0 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . payload execution = 14027 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . stage-out = 0 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,719 | INFO     | . log creation = 0 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,720 | INFO     | ..............................
[2024-05-16 17:25:25] 2024-05-16 15:25:11,794 | INFO     | 
[2024-05-16 17:25:25] 2024-05-16 15:25:11,794 | INFO     | job summary report
[2024-05-16 17:25:25] 2024-05-16 15:25:11,794 | INFO     | --------------------------------------------------
[2024-05-16 17:25:25] 2024-05-16 15:25:11,794 | INFO     | PanDA job id: 6206009688
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | task id: 38776146
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | errors: (none)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | pilot state: finished 
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | transexitcode: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | exeerrorcode: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | exeerrordiag: 
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | exitcode: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | exitmsg: OK
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | cpuconsumptiontime: 53345 s
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | nevents: 400
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | neventsw: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | pid: 1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:11,795 | INFO     | pgrp: 1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | corecount: 4
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | event service: False
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | sizes: {0: 2392020, 1: 2392219, 5: 2392425, 11: 2392481, 14037: 2423049, 14038: 2432033, 14040: 2432217, 14047: 2432387}
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | --------------------------------------------------
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | 
[2024-05-16 17:25:25] 2024-05-16 15:25:11,796 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/1
[2024-05-16 17:25:25] 2024-05-16 15:25:11,814 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,814 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,814 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,814 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | job 6206009688 has completed (purged errors)
[2024-05-16 17:25:25] 2024-05-16 15:25:11,816 | INFO     | overall cleanup function is called
[2024-05-16 17:25:25] 2024-05-16 15:25:12,823 | INFO     | --- collectZombieJob: --- 10, [1322281]
[2024-05-16 17:25:25] 2024-05-16 15:25:12,823 | INFO     | zombie collector waiting for pid 1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:12,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:25:25] 2024-05-16 15:25:13,828 | INFO     | collected zombie processes
[2024-05-16 17:25:25] 2024-05-16 15:25:13,828 | INFO     | will now attempt to kill all subprocesses of pid=1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:14,153 | INFO     | process IDs to be killed: [1322281] (in reverse order)
[2024-05-16 17:25:25] 2024-05-16 15:25:14,363 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:25:25] 2024-05-16 15:25:14,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:25:25] 2024-05-16 15:25:14,385 | INFO     | did not find any defunct processes belonging to 1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:14,404 | INFO     | did not find any defunct processes belonging to 1322281
[2024-05-16 17:25:25] 2024-05-16 15:25:14,404 | INFO     | ready for new job
[2024-05-16 17:25:25] 2024-05-16 15:25:14,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:25:25] 2024-05-16 15:25:14,406 | INFO     | *************************************
[2024-05-16 17:25:25] 2024-05-16 15:25:14,406 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:25:25] 2024-05-16 15:25:14,406 | INFO     | *************************************
[2024-05-16 17:25:25] 2024-05-16 15:25:14,406 | INFO     | 
[2024-05-16 17:25:25] 2024-05-16 15:25:14,411 | INFO     | architecture information:
[2024-05-16 17:25:25] 2024-05-16 15:25:14,411 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:25:25] 2024-05-16 15:25:14,429 | INFO     | cat /etc/os-release:
[2024-05-16 17:25:25] NAME="CentOS Linux"
[2024-05-16 17:25:25] VERSION="7 (Core)"
[2024-05-16 17:25:25] ID="centos"
[2024-05-16 17:25:25] ID_LIKE="rhel fedora"
[2024-05-16 17:25:25] VERSION_ID="7"
[2024-05-16 17:25:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:25:25] ANSI_COLOR="0;31"
[2024-05-16 17:25:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:25:25] HOME_URL="https://www.centos.org/"
[2024-05-16 17:25:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:25:25] 
[2024-05-16 17:25:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:25:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:25:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:25:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:25:25] 
[2024-05-16 17:25:25] 2024-05-16 15:25:14,430 | INFO     | *************************************
[2024-05-16 17:25:25] 2024-05-16 15:25:14,932 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/1
[2024-05-16 17:25:25] 2024-05-16 15:25:14,955 | INFO     | sufficient remaining disk space (2971354005504 B)
[2024-05-16 17:25:25] 2024-05-16 15:25:14,955 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:25:25] 2024-05-16 15:25:14,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:25:25] 2024-05-16 15:25:15,160 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:25:25] 2024-05-16 15:25:15,160 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:25:25] 2024-05-16 15:25:15,160 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:25:25] 2024-05-16 15:25:15,195 | INFO     | all data control threads have been joined
[2024-05-16 17:25:25] 2024-05-16 15:25:15,737 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:25:25] 2024-05-16 15:25:15,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:25:25] 2024-05-16 15:25:15,751 | INFO     | aborting loop
[2024-05-16 17:25:25] 2024-05-16 15:25:15,877 | INFO     | all payload control threads have been joined
[2024-05-16 17:25:25] 2024-05-16 15:25:15,888 | INFO     | all job control threads have been joined
[2024-05-16 17:25:25] 2024-05-16 15:25:15,961 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:25:25] 2024-05-16 15:25:16,200 | INFO     | [data] control thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,276 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,292 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,382 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,515 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,672 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,676 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,756 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,802 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:25:25] 2024-05-16 15:25:16,882 | INFO     | [payload] control thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:16,893 | INFO     | [job] control thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:17,445 | INFO     | [job] validate thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:17,524 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:17,807 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:18,061 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:19,742 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:25:25] 2024-05-16 15:25:19,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47531744232512)>', '<ExcThread(monitor, started 47531915482880)>']
[2024-05-16 17:25:25] 2024-05-16 15:25:20,185 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:25:25] 2024-05-16 15:25:20,185 | INFO     | [monitor] control thread has ended
[2024-05-16 17:25:25] 2024-05-16 15:25:24,803 | INFO     | all workflow threads have been joined
[2024-05-16 17:25:25] 2024-05-16 15:25:24,803 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:25:25] 2024-05-16 15:25:24,803 | INFO     | traces error code: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:24,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:25:25] 2024-05-16 15:25:24,873 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:25:25] 2024-05-16 15:25:24,879 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:25:25] 2024-05-16 15:25:24,881 [wrapper] pilotpid: 1314256
[2024-05-16 17:25:25] 2024-05-16 15:25:24,883 [wrapper] Pilot exit status: 0
[2024-05-16 17:25:25] 2024-05-16 15:25:24,890 [wrapper] pandaids: 6206009688
[2024-05-16 17:25:25] 2024-05-16 15:25:24,986 [wrapper] cleanup: SIGTERM to supervisor_pilot 2582635 1314257
[2024-05-16 17:25:25] 2024-05-16 15:25:24,988 [wrapper] Test setup, not cleaning
[2024-05-16 17:25:25] 2024-05-16 15:25:24,990 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:25:25] 2024-05-16 15:25:24,992 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:25:25] 2024-05-16 15:25:24,996 [wrapper] apfmon messages muted
[2024-05-16 17:25:25]  *** Error codes and diagnostics ***
[2024-05-16 17:25:25]     "exeErrorCode": 0,
[2024-05-16 17:25:25]     "exeErrorDiag": "",
[2024-05-16 17:25:25]     "pilotErrorCode": 0,
[2024-05-16 17:25:25]     "pilotErrorDiag": "",
[2024-05-16 17:25:25]  *** Listing of results directory ***
[2024-05-16 17:25:25] total 871088
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc    467845 May 14 06:03 pilot3.tar.gz
[2024-05-16 17:25:25] -rwx------ 1 boinc boinc     32251 May 14 06:14 runpilot2-wrapper.sh
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc      5633 May 14 06:14 queuedata.json
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc       100 May 16 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:25:25] -rwxr-xr-x 1 boinc boinc      7986 May 16 13:30 run_atlas
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc       105 May 16 13:30 job.xml
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc      6644 May 16 13:30 init_data.xml
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc 614030182 May 16 13:30 EVNT.38776140._000469.pool.root.1
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc     17537 May 16 13:30 start_atlas.sh
[2024-05-16 17:25:25] drwxrwx--x 2 boinc boinc      4096 May 16 13:30 shared
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc    479996 May 16 13:30 input.tar.gz
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc         0 May 16 13:30 boinc_lockfile
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc      2616 May 16 13:30 pandaJob.out
[2024-05-16 17:25:25] -rw------- 1 boinc boinc       424 May 16 13:30 setup.sh.local
[2024-05-16 17:25:25] -rw------- 1 boinc boinc   1010319 May 16 13:30 agis_schedconf.cvmfs.json
[2024-05-16 17:25:25] -rw------- 1 boinc boinc   1324701 May 16 13:30 cric_ddmendpoints.json
[2024-05-16 17:25:25] drwx------ 4 boinc boinc      4096 May 16 13:30 pilot3
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc       531 May 16 17:24 boinc_task_state.xml
[2024-05-16 17:25:25] -rw------- 1 boinc boinc 270810675 May 16 17:24 HITS.38776146._011836.pool.root.1
[2024-05-16 17:25:25] -rw------- 1 boinc boinc        95 May 16 17:24 pilot_heartbeat.json
[2024-05-16 17:25:25] -rw------- 1 boinc boinc      1040 May 16 17:24 memory_monitor_summary.json
[2024-05-16 17:25:25] -rw------- 1 boinc boinc         0 May 16 17:25 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:25:25] -rw------- 1 boinc boinc    338221 May 16 17:25 log.38776146._011836.job.log.tgz.1
[2024-05-16 17:25:25] -rw------- 1 boinc boinc      7718 May 16 17:25 heartbeat.json
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc      8192 May 16 17:25 boinc_mmap_file
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc        28 May 16 17:25 wrapper_checkpoint.txt
[2024-05-16 17:25:25] -rw------- 1 boinc boinc      4223 May 16 17:25 pilotlog.txt
[2024-05-16 17:25:25] -rw------- 1 boinc boinc   1476882 May 16 17:25 log.38776146._011836.job.log.1
[2024-05-16 17:25:25] -rw------- 1 boinc boinc       357 May 16 17:25 output.list
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc       620 May 16 17:25 runtime_log
[2024-05-16 17:25:25] -rw------- 1 boinc boinc   1832960 May 16 17:25 result.tar.gz
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc     11429 May 16 17:25 runtime_log.err
[2024-05-16 17:25:25] -rw------- 1 boinc boinc       658 May 16 17:25 C8fNDmXjyQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmAuHKDmEO96Fm.diag
[2024-05-16 17:25:25] -rw-r--r-- 1 boinc boinc     21336 May 16 17:25 stderr.txt
[2024-05-16 17:25:25] HITS file was successfully produced:
[2024-05-16 17:25:25] -rw------- 1 boinc boinc 270810675 May 16 17:24 shared/HITS.pool.root.1
[2024-05-16 17:25:25]  *** Contents of shared directory: ***
[2024-05-16 17:25:25] total 866396
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc 614030182 May 16 13:30 ATLAS.root_0
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc     17537 May 16 13:30 start_atlas.sh
[2024-05-16 17:25:25] -rw-r--r-- 2 boinc boinc    479996 May 16 13:30 input.tar.gz
[2024-05-16 17:25:25] -rw------- 1 boinc boinc 270810675 May 16 17:24 HITS.pool.root.1
[2024-05-16 17:25:25] -rw------- 1 boinc boinc   1832960 May 16 17:25 result.tar.gz
17:25:27 (1309644): run_atlas exited; CPU time 53012.906660
17:25:27 (1309644): called boinc_finish(0)

</stderr_txt>
]]>

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