Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:11:25 (3079353): wrapper (7.7.26015): starting
13:11:25 (3079353): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 13:11:25] Arguments: --nthreads 4
[2024-05-16 13:11:25] Threads: 4
[2024-05-16 13:11:25] Checking for CVMFS
[2024-05-16 13:11:25] No cvmfs_config command found, will try listing directly
[2024-05-16 13:11:25] CVMFS is ok
[2024-05-16 13:11:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 13:11:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 13:11:25] Further information can be found at the LHC@home message board.
[2024-05-16 13:11:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 13:11:25] Checking for apptainer binary...
[2024-05-16 13:11:25] which: no apptainer in ((null))
[2024-05-16 13:11:25] apptainer is not installed, using version from CVMFS
[2024-05-16 13:11:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 13:11:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 13:11:26] apptainer works
[2024-05-16 13:11:26] Set ATHENA_PROC_NUMBER=4
[2024-05-16 13:11:26] Set ATHENA_CORE_NUMBER=4
[2024-05-16 13:11:26] Starting ATLAS job with PandaID=6206008178
[2024-05-16 13:11:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:25:22]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:25:22] 2024-05-16 15:25:08,168 | INFO     | model: linear, x: [1715857930.0, 1715857991.0, 1715858052.0, 1715858113.0, 1715858174.0, 1715858235.0, 1715858296.0, 1715858357.0, 1715858418.0, 1715858479.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,168 | INFO     | sum of square deviations: 4504437945.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,170 | INFO     | sum of deviations: 98917146831.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,170 | INFO     | mean x: 1715865341.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,170 | INFO     | mean y: 2300742.0901639345
[2024-05-16 17:25:22] 2024-05-16 15:25:08,170 | INFO     | -- intersect: -37677983901.58683
[2024-05-16 17:25:22] 2024-05-16 15:25:08,171 | INFO     | intersect: -37677983901.58683
[2024-05-16 17:25:22] 2024-05-16 15:25:08,171 | INFO     | chi2: 4.058566139725749
[2024-05-16 17:25:22] 2024-05-16 15:25:08,171 | INFO     | current chi2=4.058566139725749 (change=-0.03906801563585657 %)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,171 | INFO     | right removable region: 243
[2024-05-16 17:25:22] 2024-05-16 15:25:08,171 | INFO     | model: linear, x: [1715858235.0, 1715858296.0, 1715858357.0, 1715858418.0, 1715858479.0, 1715858540.0, 1715858601.0, 1715858662.0, 1715858723.0, 1715858784.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,172 | INFO     | sum of square deviations: 4504437945.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,173 | INFO     | sum of deviations: 45728316360.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,173 | INFO     | mean x: 1715865646.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | mean y: 2331643.848360656
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | -- intersect: -17416855405.306526
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | intersect: -17416855405.306526
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | chi2: 1.7326802108041977
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | current chi2=1.7326802108041977 (change=57.291391222787794 %)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,174 | INFO     | model: linear, x: [1715858540.0, 1715858601.0, 1715858662.0, 1715858723.0, 1715858784.0, 1715858845.0, 1715858906.0, 1715858967.0, 1715859028.0, 1715859089.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,175 | INFO     | sum of square deviations: 4233158440.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,176 | INFO     | sum of deviations: -3182433500.9999995
[2024-05-16 17:25:22] 2024-05-16 15:25:08,176 | INFO     | mean x: 1715865799.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,176 | INFO     | mean y: 2359139.949790795
[2024-05-16 17:25:22] 2024-05-16 15:25:08,176 | INFO     | -- intersect: 1292324748.2197545
[2024-05-16 17:25:22] 2024-05-16 15:25:08,177 | INFO     | intersect: 1292324748.2197545
[2024-05-16 17:25:22] 2024-05-16 15:25:08,177 | INFO     | chi2: 0.08900199033460772
[2024-05-16 17:25:22] 2024-05-16 15:25:08,177 | INFO     | current chi2=0.08900199033460772 (change=94.8633342852517 %)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,177 | INFO     | model: linear, x: [1715858845.0, 1715858906.0, 1715858967.0, 1715859028.0, 1715859089.0, 1715859150.0, 1715859211.0, 1715859272.0, 1715859333.0, 1715859394.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,177 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | sum of deviations: -9251339330.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | mean x: 1715865951.5
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | mean y: 2362645.106837607
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | -- intersect: 3997851306.6540575
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | intersect: 3997851306.6540575
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | chi2: 0.006833375544540656
[2024-05-16 17:25:22] 2024-05-16 15:25:08,179 | INFO     | current chi2=0.006833375544540656 (change=92.32222165049319 %)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,180 | INFO     | model: linear, x: [1715859150.0, 1715859211.0, 1715859272.0, 1715859333.0, 1715859394.0, 1715859455.0, 1715859516.0, 1715859577.0, 1715859638.0, 1715859699.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,180 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,181 | INFO     | sum of deviations: -8399815839.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,181 | INFO     | mean x: 1715866104.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,181 | INFO     | mean y: 2362123.3318777294
[2024-05-16 17:25:22] 2024-05-16 15:25:08,181 | INFO     | -- intersect: 3872946776.0523014
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | intersect: 3872946776.0523014
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | chi2: 0.006766813899019725
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | current chi2=0.006766813899019725 (change=0.974066844227643 %)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | left removable region: 40
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | model: linear, x: [1715860370.0, 1715860431.0, 1715860492.0, 1715860553.0, 1715860614.0, 1715860675.0, 1715860736.0, 1715860797.0, 1715860858.0, 1715860919.0, 1715
[2024-05-16 17:25:22] 2024-05-16 15:25:08,182 | INFO     | sum of square deviations: 2593916542.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | sum of deviations: -2726895444.0000005
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | mean x: 1715866531.0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | mean y: 2358361.0443349755
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | -- intersect: 1806189960.9185245
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | intersect: 1806189960.9185245
[2024-05-16 17:25:22] 2024-05-16 15:25:08,184 | INFO     | chi2: 0.0025283494612175937
[2024-05-16 17:25:22] 2024-05-16 15:25:08,185 | INFO     | -- intersect: 1806189960.9185245
[2024-05-16 17:25:22] 2024-05-16 15:25:08,185 | INFO     | current memory leak: -1.05 B/s (using 203 data points, chi2=0.00)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,185 | INFO     | ..............................
[2024-05-16 17:25:22] 2024-05-16 15:25:08,185 | INFO     | . Timing measurements:
[2024-05-16 17:25:22] 2024-05-16 15:25:08,185 | INFO     | . get job = 0 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . initial setup = 1 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . payload setup = 8 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . stage-in = 0 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . payload execution = 15170 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . stage-out = 1 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | . log creation = 0 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,186 | INFO     | ..............................
[2024-05-16 17:25:22] 2024-05-16 15:25:08,368 | WARNING  | process 3091923 is no longer using CPU - aborting
[2024-05-16 17:25:22] 2024-05-16 15:25:08,368 | INFO     | aborting job monitoring since job object (job id=6206008178) has expired
[2024-05-16 17:25:22] 2024-05-16 15:25:08,672 | INFO     | 
[2024-05-16 17:25:22] 2024-05-16 15:25:08,672 | INFO     | job summary report
[2024-05-16 17:25:22] 2024-05-16 15:25:08,672 | INFO     | --------------------------------------------------
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | PanDA job id: 6206008178
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | task id: 38776146
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | errors: (none)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | pilot state: finished 
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | transexitcode: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | exeerrorcode: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | exeerrordiag: 
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | exitcode: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | exitmsg: OK
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | cpuconsumptiontime: 58074 s
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | nevents: 400
[2024-05-16 17:25:22] 2024-05-16 15:25:08,673 | INFO     | neventsw: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | pid: 3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | pgrp: 3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | corecount: 4
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | event service: False
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | sizes: {0: 2392019, 1: 2392218, 7: 2392424, 11: 2392452, 15182: 2423243, 15185: 2432409, 15192: 2432523}
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | --------------------------------------------------
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | 
[2024-05-16 17:25:22] 2024-05-16 15:25:08,674 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/1
[2024-05-16 17:25:22] 2024-05-16 15:25:08,702 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,703 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:25:22] 2024-05-16 15:25:08,704 | INFO     | job 6206008178 has completed (purged errors)
[2024-05-16 17:25:22] 2024-05-16 15:25:08,705 | INFO     | overall cleanup function is called
[2024-05-16 17:25:22] 2024-05-16 15:25:09,712 | INFO     | --- collectZombieJob: --- 10, [3091923]
[2024-05-16 17:25:22] 2024-05-16 15:25:09,712 | INFO     | zombie collector waiting for pid 3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:09,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:25:22] 2024-05-16 15:25:10,717 | INFO     | collected zombie processes
[2024-05-16 17:25:22] 2024-05-16 15:25:10,717 | INFO     | will now attempt to kill all subprocesses of pid=3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:10,937 | INFO     | process IDs to be killed: [3091923] (in reverse order)
[2024-05-16 17:25:22] 2024-05-16 15:25:11,138 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:25:22] 2024-05-16 15:25:11,138 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:25:22] 2024-05-16 15:25:11,154 | INFO     | did not find any defunct processes belonging to 3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:11,170 | INFO     | did not find any defunct processes belonging to 3091923
[2024-05-16 17:25:22] 2024-05-16 15:25:11,171 | INFO     | ready for new job
[2024-05-16 17:25:22] 2024-05-16 15:25:11,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:25:22] 2024-05-16 15:25:11,173 | INFO     | *************************************
[2024-05-16 17:25:22] 2024-05-16 15:25:11,173 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:25:22] 2024-05-16 15:25:11,173 | INFO     | *************************************
[2024-05-16 17:25:22] 2024-05-16 15:25:11,173 | INFO     | 
[2024-05-16 17:25:22] 2024-05-16 15:25:11,179 | INFO     | architecture information:
[2024-05-16 17:25:22] 2024-05-16 15:25:11,180 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:25:22] 2024-05-16 15:25:11,199 | INFO     | cat /etc/os-release:
[2024-05-16 17:25:22] NAME="CentOS Linux"
[2024-05-16 17:25:22] VERSION="7 (Core)"
[2024-05-16 17:25:22] ID="centos"
[2024-05-16 17:25:22] ID_LIKE="rhel fedora"
[2024-05-16 17:25:22] VERSION_ID="7"
[2024-05-16 17:25:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:25:22] ANSI_COLOR="0;31"
[2024-05-16 17:25:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:25:22] HOME_URL="https://www.centos.org/"
[2024-05-16 17:25:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:25:22] 
[2024-05-16 17:25:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:25:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:25:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:25:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:25:22] 
[2024-05-16 17:25:22] 2024-05-16 15:25:11,200 | INFO     | *************************************
[2024-05-16 17:25:22] 2024-05-16 15:25:11,702 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/1
[2024-05-16 17:25:22] 2024-05-16 15:25:11,727 | INFO     | sufficient remaining disk space (3070431854592 B)
[2024-05-16 17:25:22] 2024-05-16 15:25:11,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:25:22] 2024-05-16 15:25:11,727 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:25:22] 2024-05-16 15:25:11,728 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 17:25:22] 2024-05-16 15:25:11,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:25:22] 2024-05-16 15:25:11,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:25:22] 2024-05-16 15:25:11,729 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:25:22] 2024-05-16 15:25:11,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:25:22] 2024-05-16 15:25:11,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:25:22] 2024-05-16 15:25:11,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:25:22] 2024-05-16 15:25:11,876 | INFO     | aborting loop
[2024-05-16 17:25:22] 2024-05-16 15:25:12,071 | INFO     | all data control threads have been joined
[2024-05-16 17:25:22] 2024-05-16 15:25:12,112 | INFO     | all job control threads have been joined
[2024-05-16 17:25:22] 2024-05-16 15:25:12,183 | INFO     | all payload control threads have been joined
[2024-05-16 17:25:22] 2024-05-16 15:25:12,733 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:12,818 | INFO     | [job] validate thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:12,881 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,077 | INFO     | [data] control thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,117 | INFO     | [job] control thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,188 | INFO     | [payload] control thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,199 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,243 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,298 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:25:22] 2024-05-16 15:25:13,323 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,377 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,703 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,735 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:13,778 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:14,115 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:14,303 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:15,735 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:25:22] 2024-05-16 15:25:16,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47065592689728)>', '<ExcThread(monitor, started 47065770243840)>']
[2024-05-16 17:25:22] 2024-05-16 15:25:17,752 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:25:22] 2024-05-16 15:25:17,752 | INFO     | [monitor] control thread has ended
[2024-05-16 17:25:22] 2024-05-16 15:25:21,956 | INFO     | all workflow threads have been joined
[2024-05-16 17:25:22] 2024-05-16 15:25:21,956 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:25:22] 2024-05-16 15:25:21,957 | INFO     | traces error code: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:21,957 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:25:22] 2024-05-16 15:25:22,022 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:25:22] 2024-05-16 15:25:22,026 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:25:22] 2024-05-16 15:25:22,028 [wrapper] pilotpid: 3084095
[2024-05-16 17:25:22] 2024-05-16 15:25:22,031 [wrapper] Pilot exit status: 0
[2024-05-16 17:25:22] 2024-05-16 15:25:22,041 [wrapper] pandaids: 6206008178
[2024-05-16 17:25:22] 2024-05-16 15:25:22,131 [wrapper] cleanup: SIGTERM to supervisor_pilot  296248 3084096
[2024-05-16 17:25:22] 2024-05-16 15:25:22,134 [wrapper] Test setup, not cleaning
[2024-05-16 17:25:22] 2024-05-16 15:25:22,136 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:25:22] 2024-05-16 15:25:22,138 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:25:22] 2024-05-16 15:25:22,142 [wrapper] apfmon messages muted
[2024-05-16 17:25:22]  *** Error codes and diagnostics ***
[2024-05-16 17:25:22]     "exeErrorCode": 0,
[2024-05-16 17:25:22]     "exeErrorDiag": "",
[2024-05-16 17:25:22]     "pilotErrorCode": 0,
[2024-05-16 17:25:22]     "pilotErrorDiag": "",
[2024-05-16 17:25:22]  *** Listing of results directory ***
[2024-05-16 17:25:22] total 870828
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc    467845 May 14 05:28 pilot3.tar.gz
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc      5633 May 14 05:43 queuedata.json
[2024-05-16 17:25:22] -rwx------ 1 boinc boinc     32251 May 14 05:44 runpilot2-wrapper.sh
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc       100 May 16 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:25:22] -rwxr-xr-x 1 boinc boinc      7986 May 16 13:11 run_atlas
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc       105 May 16 13:11 job.xml
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc      6643 May 16 13:11 init_data.xml
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc 611296025 May 16 13:11 EVNT.38776140._000456.pool.root.1
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc     17537 May 16 13:11 start_atlas.sh
[2024-05-16 17:25:22] drwxrwx--x 2 boinc boinc      4096 May 16 13:11 shared
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc    479998 May 16 13:11 input.tar.gz
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc         0 May 16 13:11 boinc_lockfile
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc      2616 May 16 13:11 pandaJob.out
[2024-05-16 17:25:22] -rw------- 1 boinc boinc       424 May 16 13:11 setup.sh.local
[2024-05-16 17:25:22] -rw------- 1 boinc boinc   1010327 May 16 13:11 agis_schedconf.cvmfs.json
[2024-05-16 17:25:22] -rw------- 1 boinc boinc   1324701 May 16 13:11 cric_ddmendpoints.json
[2024-05-16 17:25:22] drwx------ 4 boinc boinc      4096 May 16 13:11 pilot3
[2024-05-16 17:25:22] -rw------- 1 boinc boinc 272971752 May 16 17:24 HITS.38776146._011507.pool.root.1
[2024-05-16 17:25:22] -rw------- 1 boinc boinc        95 May 16 17:24 pilot_heartbeat.json
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc       532 May 16 17:24 boinc_task_state.xml
[2024-05-16 17:25:22] -rw------- 1 boinc boinc      1040 May 16 17:24 memory_monitor_summary.json
[2024-05-16 17:25:22] -rw------- 1 boinc boinc         0 May 16 17:25 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:25:22] -rw------- 1 boinc boinc    348681 May 16 17:25 log.38776146._011507.job.log.tgz.1
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc      8192 May 16 17:25 boinc_mmap_file
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc        28 May 16 17:25 wrapper_checkpoint.txt
[2024-05-16 17:25:22] -rw------- 1 boinc boinc      7724 May 16 17:25 heartbeat.json
[2024-05-16 17:25:22] -rw------- 1 boinc boinc      4345 May 16 17:25 pilotlog.txt
[2024-05-16 17:25:22] -rw------- 1 boinc boinc   1617538 May 16 17:25 log.38776146._011507.job.log.1
[2024-05-16 17:25:22] -rw------- 1 boinc boinc       357 May 16 17:25 output.list
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc       620 May 16 17:25 runtime_log
[2024-05-16 17:25:22] -rw------- 1 boinc boinc   1986560 May 16 17:25 result.tar.gz
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc     11410 May 16 17:25 runtime_log.err
[2024-05-16 17:25:22] -rw------- 1 boinc boinc       659 May 16 17:25 QheLDm1GyQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmC2LKDmhN6NTo.diag
[2024-05-16 17:25:22] -rw-r--r-- 1 boinc boinc     21414 May 16 17:25 stderr.txt
[2024-05-16 17:25:22] HITS file was successfully produced:
[2024-05-16 17:25:22] -rw------- 1 boinc boinc 272971752 May 16 17:24 shared/HITS.pool.root.1
[2024-05-16 17:25:22]  *** Contents of shared directory: ***
[2024-05-16 17:25:22] total 865988
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc 611296025 May 16 13:11 ATLAS.root_0
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc     17537 May 16 13:11 start_atlas.sh
[2024-05-16 17:25:22] -rw-r--r-- 2 boinc boinc    479998 May 16 13:11 input.tar.gz
[2024-05-16 17:25:22] -rw------- 1 boinc boinc 272971752 May 16 17:24 HITS.pool.root.1
[2024-05-16 17:25:22] -rw------- 1 boinc boinc   1986560 May 16 17:25 result.tar.gz
17:25:23 (3079353): run_atlas exited; CPU time 57722.913105
17:25:23 (3079353): called boinc_finish(0)

</stderr_txt>
]]>

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