| Name | VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo_0 |
| Workunit | 222992412 |
| Created | 14 May 2024, 2:05:48 UTC |
| Sent | 14 May 2024, 4:48:10 UTC |
| Report deadline | 22 May 2024, 4:48:10 UTC |
| Received | 22 May 2024, 20:09:23 UTC |
| Server state | Over |
| Outcome | No reply |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10691181 |
| Run time | 5 hours 13 min 55 sec |
| CPU time | 18 hours 42 min 11 sec |
| Validate state | Initial |
| Credit | 0.00 |
| Device peak FLOPS | 15.63 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.34 GB |
| Peak swap size | 35.51 GB |
| Peak disk usage | 1.72 GB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
02:55:05 (2783060): wrapper (7.7.26015): starting
02:55:05 (2783060): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 02:55:05] Arguments: --nthreads 4
[2024-05-16 02:55:05] Threads: 4
[2024-05-16 02:55:05] Checking for CVMFS
[2024-05-16 02:55:05] No cvmfs_config command found, will try listing directly
[2024-05-16 02:55:05] CVMFS is ok
[2024-05-16 02:55:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 02:55:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 02:55:05] Further information can be found at the LHC@home message board.
[2024-05-16 02:55:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 02:55:05] Checking for apptainer binary...
[2024-05-16 02:55:05] which: no apptainer in ((null))
[2024-05-16 02:55:05] apptainer is not installed, using version from CVMFS
[2024-05-16 02:55:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 02:55:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-16 02:55:06] apptainer works
[2024-05-16 02:55:06] Set ATHENA_PROC_NUMBER=4
[2024-05-16 02:55:06] Set ATHENA_CORE_NUMBER=4
[2024-05-16 02:55:06] Starting ATLAS job with PandaID=6205991928
[2024-05-16 02:55:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:35:12 (3785363): wrapper (7.7.26015): starting
19:35:12 (3785363): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 19:35:12] Arguments: --nthreads 4
[2024-05-17 19:35:12] Threads: 4
[2024-05-17 19:35:12] This job has been restarted, cleaning up previous attempt
[2024-05-17 19:35:12] Checking for CVMFS
[2024-05-17 19:35:12] No cvmfs_config command found, will try listing directly
[2024-05-17 19:35:12] CVMFS is ok
[2024-05-17 19:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 19:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 19:35:12] Further information can be found at the LHC@home message board.
[2024-05-17 19:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 19:35:12] Checking for apptainer binary...
[2024-05-17 19:35:12] which: no apptainer in ((null))
[2024-05-17 19:35:12] apptainer is not installed, using version from CVMFS
[2024-05-17 19:35:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 19:35:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-17 19:35:13] apptainer works
[2024-05-17 19:35:13] Set ATHENA_PROC_NUMBER=4
[2024-05-17 19:35:13] Set ATHENA_CORE_NUMBER=4
[2024-05-17 19:35:13] Starting ATLAS job with PandaID=6205991928
[2024-05-17 19:35:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 19:38:21] Job failed
[2024-05-17 19:38:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-17 19:38:21] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-17 19:38:21] + mv ATLAS.root_0 EVNT.38776140._000416.pool.root.1
[2024-05-17 19:38:21] mv: 'ATLAS.root_0' and 'EVNT.38776140._000416.pool.root.1' are the same file
[2024-05-17 19:38:21] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-17 19:38:21] + umask 077
[2024-05-17 19:38:21] ++ date +%s
[2024-05-17 19:38:21] + ACCOUNTING_STARTTIME=1715967313
[2024-05-17 19:38:21] + echo 'Detecting resource accounting method available for the job.'
[2024-05-17 19:38:21] Detecting resource accounting method available for the job.
[2024-05-17 19:38:21] + JOB_ACCOUNTING=
[2024-05-17 19:38:21] + command -v arc-job-cgroup
[2024-05-17 19:38:21] + '[' -z '' ']'
[2024-05-17 19:38:21] + GNU_TIME=/usr/bin/time
[2024-05-17 19:38:21] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-17 19:38:21] Looking for /usr/bin/time tool for accounting measurements
[2024-05-17 19:38:21] + '[' '!' -z /usr/bin/time ']'
[2024-05-17 19:38:21] + /usr/bin/time --version
[2024-05-17 19:38:21] + echo 'GNU time found and will be used for job accounting.'
[2024-05-17 19:38:21] GNU time found and will be used for job accounting.
[2024-05-17 19:38:21] + JOB_ACCOUNTING=gnutime
[2024-05-17 19:38:21] + '[' -z gnutime ']'
[2024-05-17 19:38:21] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-17 19:38:21] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-17 19:38:21] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-17 19:38:21] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-17 19:38:21] + export PILOT_NOKILL=YES
[2024-05-17 19:38:21] + PILOT_NOKILL=YES
[2024-05-17 19:38:21] + export GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-17 19:38:21] + GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-17 19:38:21] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-17 19:38:21] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-17 19:38:21] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-17 19:38:21] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-17 19:38:21] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-17 19:38:21] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/1
[2024-05-17 19:38:21] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1.diag
[2024-05-17 19:38:21] + '[' '!' -z '' ']'
[2024-05-17 19:38:21] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-17 19:38:21] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-17 19:38:21] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-17 19:38:21] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-17 19:38:21] + '[' '!' -z '' ']'
[2024-05-17 19:38:21] + '[' -z yes ']'
[2024-05-17 19:38:21] ++ pwd
[2024-05-17 19:38:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-17 19:38:21] + runtimeenvironments=
[2024-05-17 19:38:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-17 19:38:21] + RTE_function_0 1
[2024-05-17 19:38:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 19:38:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 19:38:21] + export BOINC_APP=ATLAS
[2024-05-17 19:38:21] + BOINC_APP=ATLAS
[2024-05-17 19:38:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 19:38:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 19:38:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 19:38:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 19:38:21] + '[' -z 1 ']'
[2024-05-17 19:38:21] + '[' 1 == 1 ']'
[2024-05-17 19:38:21] + shift
[2024-05-17 19:38:21] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-17 19:38:21] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 19:38:21] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-17 19:38:21] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-17 19:38:21] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-17 19:38:21] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-17 19:38:21] + grep '<use_http_proxy/>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-17 19:38:21] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-17 19:38:21] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-17 19:38:21] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-17 19:38:21] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 19:38:21] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-17 19:38:21] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 19:38:21] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 19:38:21] + '[' 0 -ne 0 ']'
[2024-05-17 19:38:21] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-17 19:38:21] + '[' -f /etc/os-release ']'
[2024-05-17 19:38:21] +++ cat /etc/os-release
[2024-05-17 19:38:21] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-17 19:38:21] +++ NAME='CentOS Linux'
[2024-05-17 19:38:21] +++ VERSION='7 (Core)'
[2024-05-17 19:38:21] +++ ID=centos
[2024-05-17 19:38:21] +++ ID_LIKE='rhel fedora'
[2024-05-17 19:38:21] +++ VERSION_ID=7
[2024-05-17 19:38:21] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-17 19:38:21] +++ ANSI_COLOR='0;31'
[2024-05-17 19:38:21] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-17 19:38:21] +++ HOME_URL=https://www.centos.org/
[2024-05-17 19:38:21] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-17 19:38:21] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-17 19:38:21] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-17 19:38:21] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-17 19:38:21] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-17 19:38:21] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-17 19:38:21] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-17 19:38:21] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-17 19:38:21] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-17 19:38:21] + HOME=/scratch/boinc/var/slot8/slots/1
[2024-05-17 19:38:21] + export HOME
[2024-05-17 19:38:21] + cd /scratch/boinc/var/slot8/slots/1
[2024-05-17 19:38:21] + '[' '!' -z '' ']'
[2024-05-17 19:38:21] + '[' -z '' ']'
[2024-05-17 19:38:21] ++ /bin/hostname -f
[2024-05-17 19:38:21] + nodename=skurut09.grid.cesnet.cz
[2024-05-17 19:38:21] + echo nodename=skurut09.grid.cesnet.cz
[2024-05-17 19:38:21] + echo Processors=1
[2024-05-17 19:38:21] + echo Benchmark=HEPSPEC:1.0
[2024-05-17 19:38:21] + executable=./runpilot2-wrapper.sh
[2024-05-17 19:38:21] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-17 19:38:21] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-17 19:38:21] ++ head -n 1
[2024-05-17 19:38:21] ++ tr -d '\0'
[2024-05-17 19:38:21] + line1='#!/bin/bash'
[2024-05-17 19:38:21] ++ echo '#!/bin/bash'
[2024-05-17 19:38:21] ++ sed -n 's/^#! *//p'
[2024-05-17 19:38:21] + shebang=/bin/bash
[2024-05-17 19:38:21] ++ echo /bin/bash
[2024-05-17 19:38:21] ++ awk '{print $1}'
[2024-05-17 19:38:21] + interpreter=/bin/bash
[2024-05-17 19:38:21] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-17 19:38:21] + '[' x/bin/bash = x ']'
[2024-05-17 19:38:21] + type /bin/bash
[2024-05-17 19:38:21] + '[' xgnutime = xgnutime ']'
[2024-05-17 19:38:21] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-17 19:38:21] + RESULT=2
[2024-05-17 19:38:21] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-17 19:38:21] ++ grep domain_name init_data.xml
[2024-05-17 19:38:21] ++ awk -F '>' '{print $2}'
[2024-05-17 19:38:21] ++ sed -e 's# #_#g'
[2024-05-17 19:38:21] ++ awk -F '<' '{print $1}'
[2024-05-17 19:38:21] + hostname=skurut09.grid.cesnet.cz
[2024-05-17 19:38:21] ++ grep user_name init_data.xml
[2024-05-17 19:38:21] ++ awk -F '>' '{print $2}'
[2024-05-17 19:38:21] ++ awk -F '<' '{print $1}'
[2024-05-17 19:38:21] ++ sed -e 's# #_#g'
[2024-05-17 19:38:21] + username=praguelcg2
[2024-05-17 19:38:21] + nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-17 19:38:21] + echo nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-17 19:38:21] + '[' -n 4 ']'
[2024-05-17 19:38:21] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-17 19:38:21] + echo exitcode=2
[2024-05-17 19:38:21] + runtimeenvironments=
[2024-05-17 19:38:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-17 19:38:21] + RTE_function_0 2
[2024-05-17 19:38:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 19:38:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 19:38:21] + export BOINC_APP=ATLAS
[2024-05-17 19:38:21] + BOINC_APP=ATLAS
[2024-05-17 19:38:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 19:38:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 19:38:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 19:38:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 19:38:21] + '[' -z 2 ']'
[2024-05-17 19:38:21] + '[' 2 == 1 ']'
[2024-05-17 19:38:21] + '[' 0 -ne 0 ']'
[2024-05-17 19:38:21] + echo 'zip all output files'
[2024-05-17 19:38:21] + flist='*.diag '
[2024-05-17 19:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-17 19:38:21] + '[' -e ./heartbeat.json ']'
[2024-05-17 19:38:21] + flist='*.diag ./heartbeat.json'
[2024-05-17 19:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-17 19:38:21] + '[' -e ./output.list ']'
[2024-05-17 19:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-17 19:38:21] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-17 19:38:21] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1'
[2024-05-17 19:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-17 19:38:21] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-17 19:38:21] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1'
[2024-05-17 19:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-17 19:38:21] + '[' -e ./gmlog/ ']'
[2024-05-17 19:38:21] + '[' -f output.list ']'
[2024-05-17 19:38:21] + tar cvf result.tar.gz VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1
[2024-05-17 19:38:21] + '[' xgnutime = xcgroup ']'
[2024-05-17 19:38:21] + '[' -n '' ']'
[2024-05-17 19:38:21] + '[' -n '' ']'
[2024-05-17 19:38:21] ++ date +%s
[2024-05-17 19:38:21] + ACCOUNTING_ENDTIME=1715967500
[2024-05-17 19:38:21] ++ date -d '1970-01-01 UTC 1715967313 seconds' +%Y%m%d%H%M%SZ
[2024-05-17 19:38:21] + echo LRMSStartTime=20240517193513Z
[2024-05-17 19:38:21] ++ date -d '1970-01-01 UTC 1715967500 seconds' +%Y%m%d%H%M%SZ
[2024-05-17 19:38:21] + echo LRMSEndTime=20240517193820Z
[2024-05-17 19:38:21] + echo walltime=187
[2024-05-17 19:38:21] + echo exitcode=2
[2024-05-17 19:38:21] + exit 2
[2024-05-17 19:38:21] ./log.38776146._010305.job.log.1
[2024-05-17 19:38:21] ./PanDA_Pilot-6205991928/prmon.log
[2024-05-17 19:38:21] ./PanDA_Pilot-6205991928/log.EVNTtoHITS
[2024-05-17 19:38:21] ./PanDA_Pilot-6205991928/PoolFileCatalog.xml
[2024-05-17 19:38:21] ./PanDA_Pilot-6205991928/pilotlog.txt
[2024-05-17 19:38:21] ./pilot3/pilot/util/loggingsupport.py
[2024-05-17 19:38:21] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-17 19:38:21] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-17 19:38:21] ./pilot3/pilot/util/realtimelogger.py
[2024-05-17 19:38:21] ./runtime_log
[2024-05-17 19:38:21] ./runtime_log.err
[2024-05-17 19:38:21] ./pilotlog.txt
07:37:05 (3215974): wrapper (7.7.26015): starting
07:37:05 (3215974): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 07:37:05] Arguments: --nthreads 4
[2024-05-19 07:37:05] Threads: 4
[2024-05-19 07:37:05] This job has been restarted, cleaning up previous attempt
[2024-05-19 07:37:05] Checking for CVMFS
[2024-05-19 07:37:05] No cvmfs_config command found, will try listing directly
[2024-05-19 07:37:05] CVMFS is ok
[2024-05-19 07:37:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 07:37:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 07:37:05] Further information can be found at the LHC@home message board.
[2024-05-19 07:37:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 07:37:05] Checking for apptainer binary...
[2024-05-19 07:37:05] which: no apptainer in ((null))
[2024-05-19 07:37:05] apptainer is not installed, using version from CVMFS
[2024-05-19 07:37:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 07:37:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-19 07:37:06] apptainer works
[2024-05-19 07:37:06] Set ATHENA_PROC_NUMBER=4
[2024-05-19 07:37:06] Set ATHENA_CORE_NUMBER=4
[2024-05-19 07:37:06] Starting ATLAS job with PandaID=6205991928
[2024-05-19 07:37:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 07:40:14] Job failed
[2024-05-19 07:40:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-19 07:40:14] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-19 07:40:14] + mv ATLAS.root_0 EVNT.38776140._000416.pool.root.1
[2024-05-19 07:40:14] mv: 'ATLAS.root_0' and 'EVNT.38776140._000416.pool.root.1' are the same file
[2024-05-19 07:40:14] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-19 07:40:14] + umask 077
[2024-05-19 07:40:14] ++ date +%s
[2024-05-19 07:40:14] + ACCOUNTING_STARTTIME=1716097026
[2024-05-19 07:40:14] + echo 'Detecting resource accounting method available for the job.'
[2024-05-19 07:40:14] Detecting resource accounting method available for the job.
[2024-05-19 07:40:14] + JOB_ACCOUNTING=
[2024-05-19 07:40:14] + command -v arc-job-cgroup
[2024-05-19 07:40:14] + '[' -z '' ']'
[2024-05-19 07:40:14] + GNU_TIME=/usr/bin/time
[2024-05-19 07:40:14] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-19 07:40:14] Looking for /usr/bin/time tool for accounting measurements
[2024-05-19 07:40:14] + '[' '!' -z /usr/bin/time ']'
[2024-05-19 07:40:14] + /usr/bin/time --version
[2024-05-19 07:40:14] + echo 'GNU time found and will be used for job accounting.'
[2024-05-19 07:40:14] GNU time found and will be used for job accounting.
[2024-05-19 07:40:14] + JOB_ACCOUNTING=gnutime
[2024-05-19 07:40:14] + '[' -z gnutime ']'
[2024-05-19 07:40:14] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 07:40:14] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 07:40:14] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-19 07:40:14] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-19 07:40:14] + export PILOT_NOKILL=YES
[2024-05-19 07:40:14] + PILOT_NOKILL=YES
[2024-05-19 07:40:14] + export GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-19 07:40:14] + GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-19 07:40:14] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-19 07:40:14] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-19 07:40:14] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 07:40:14] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 07:40:14] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-19 07:40:14] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/1
[2024-05-19 07:40:14] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1.diag
[2024-05-19 07:40:14] + '[' '!' -z '' ']'
[2024-05-19 07:40:14] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-19 07:40:14] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-19 07:40:14] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-19 07:40:14] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-19 07:40:14] + '[' '!' -z '' ']'
[2024-05-19 07:40:14] + '[' -z yes ']'
[2024-05-19 07:40:14] ++ pwd
[2024-05-19 07:40:14] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-19 07:40:14] + runtimeenvironments=
[2024-05-19 07:40:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 07:40:14] + RTE_function_0 1
[2024-05-19 07:40:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 07:40:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 07:40:14] + export BOINC_APP=ATLAS
[2024-05-19 07:40:14] + BOINC_APP=ATLAS
[2024-05-19 07:40:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 07:40:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 07:40:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 07:40:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 07:40:14] + '[' -z 1 ']'
[2024-05-19 07:40:14] + '[' 1 == 1 ']'
[2024-05-19 07:40:14] + shift
[2024-05-19 07:40:14] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-19 07:40:14] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 07:40:14] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-19 07:40:14] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-19 07:40:14] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-19 07:40:14] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-19 07:40:14] + grep '<use_http_proxy/>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-19 07:40:14] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-19 07:40:14] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-19 07:40:14] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-19 07:40:14] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 07:40:14] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-19 07:40:14] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 07:40:14] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 07:40:14] + '[' 0 -ne 0 ']'
[2024-05-19 07:40:14] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-19 07:40:14] + '[' -f /etc/os-release ']'
[2024-05-19 07:40:14] +++ cat /etc/os-release
[2024-05-19 07:40:14] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-19 07:40:14] +++ NAME='CentOS Linux'
[2024-05-19 07:40:14] +++ VERSION='7 (Core)'
[2024-05-19 07:40:14] +++ ID=centos
[2024-05-19 07:40:14] +++ ID_LIKE='rhel fedora'
[2024-05-19 07:40:14] +++ VERSION_ID=7
[2024-05-19 07:40:14] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-19 07:40:14] +++ ANSI_COLOR='0;31'
[2024-05-19 07:40:14] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-19 07:40:14] +++ HOME_URL=https://www.centos.org/
[2024-05-19 07:40:14] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-19 07:40:14] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-19 07:40:14] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-19 07:40:14] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-19 07:40:14] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-19 07:40:14] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-19 07:40:14] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-19 07:40:14] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-19 07:40:14] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-19 07:40:14] + HOME=/scratch/boinc/var/slot8/slots/1
[2024-05-19 07:40:14] + export HOME
[2024-05-19 07:40:14] + cd /scratch/boinc/var/slot8/slots/1
[2024-05-19 07:40:14] + '[' '!' -z '' ']'
[2024-05-19 07:40:14] + '[' -z '' ']'
[2024-05-19 07:40:14] ++ /bin/hostname -f
[2024-05-19 07:40:14] + nodename=skurut09.grid.cesnet.cz
[2024-05-19 07:40:14] + echo nodename=skurut09.grid.cesnet.cz
[2024-05-19 07:40:14] + echo Processors=1
[2024-05-19 07:40:14] + echo Benchmark=HEPSPEC:1.0
[2024-05-19 07:40:14] + executable=./runpilot2-wrapper.sh
[2024-05-19 07:40:14] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-19 07:40:14] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-19 07:40:14] ++ head -n 1
[2024-05-19 07:40:14] ++ tr -d '\0'
[2024-05-19 07:40:14] + line1='#!/bin/bash'
[2024-05-19 07:40:14] ++ echo '#!/bin/bash'
[2024-05-19 07:40:14] ++ sed -n 's/^#! *//p'
[2024-05-19 07:40:14] + shebang=/bin/bash
[2024-05-19 07:40:14] ++ echo /bin/bash
[2024-05-19 07:40:14] ++ awk '{print $1}'
[2024-05-19 07:40:14] + interpreter=/bin/bash
[2024-05-19 07:40:14] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-19 07:40:14] + '[' x/bin/bash = x ']'
[2024-05-19 07:40:14] + type /bin/bash
[2024-05-19 07:40:14] + '[' xgnutime = xgnutime ']'
[2024-05-19 07:40:14] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-19 07:40:14] + RESULT=2
[2024-05-19 07:40:14] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-19 07:40:14] ++ grep domain_name init_data.xml
[2024-05-19 07:40:14] ++ awk -F '>' '{print $2}'
[2024-05-19 07:40:14] ++ awk -F '<' '{print $1}'
[2024-05-19 07:40:14] ++ sed -e 's# #_#g'
[2024-05-19 07:40:14] + hostname=skurut09.grid.cesnet.cz
[2024-05-19 07:40:14] ++ grep user_name init_data.xml
[2024-05-19 07:40:14] ++ awk -F '>' '{print $2}'
[2024-05-19 07:40:14] ++ awk -F '<' '{print $1}'
[2024-05-19 07:40:14] ++ sed -e 's# #_#g'
[2024-05-19 07:40:14] + username=praguelcg2
[2024-05-19 07:40:14] + nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-19 07:40:14] + echo nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-19 07:40:14] + '[' -n 4 ']'
[2024-05-19 07:40:14] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-19 07:40:14] + echo exitcode=2
[2024-05-19 07:40:14] + runtimeenvironments=
[2024-05-19 07:40:14] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 07:40:14] + RTE_function_0 2
[2024-05-19 07:40:14] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 07:40:14] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 07:40:14] + export BOINC_APP=ATLAS
[2024-05-19 07:40:14] + BOINC_APP=ATLAS
[2024-05-19 07:40:14] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 07:40:14] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 07:40:14] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 07:40:14] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 07:40:14] + '[' -z 2 ']'
[2024-05-19 07:40:14] + '[' 2 == 1 ']'
[2024-05-19 07:40:14] + '[' 0 -ne 0 ']'
[2024-05-19 07:40:14] + echo 'zip all output files'
[2024-05-19 07:40:14] + flist='*.diag '
[2024-05-19 07:40:14] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-19 07:40:14] + '[' -e ./heartbeat.json ']'
[2024-05-19 07:40:14] + flist='*.diag ./heartbeat.json'
[2024-05-19 07:40:14] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-19 07:40:14] + '[' -e ./output.list ']'
[2024-05-19 07:40:14] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-19 07:40:14] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-19 07:40:14] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1'
[2024-05-19 07:40:14] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-19 07:40:14] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-19 07:40:14] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1'
[2024-05-19 07:40:14] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-19 07:40:14] + '[' -e ./gmlog/ ']'
[2024-05-19 07:40:14] + '[' -f output.list ']'
[2024-05-19 07:40:14] + tar cvf result.tar.gz VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1
[2024-05-19 07:40:14] + '[' xgnutime = xcgroup ']'
[2024-05-19 07:40:14] + '[' -n '' ']'
[2024-05-19 07:40:14] + '[' -n '' ']'
[2024-05-19 07:40:14] ++ date +%s
[2024-05-19 07:40:14] + ACCOUNTING_ENDTIME=1716097213
[2024-05-19 07:40:14] ++ date -d '1970-01-01 UTC 1716097026 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 07:40:14] + echo LRMSStartTime=20240519073706Z
[2024-05-19 07:40:14] ++ date -d '1970-01-01 UTC 1716097213 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 07:40:14] + echo LRMSEndTime=20240519074013Z
[2024-05-19 07:40:14] + echo walltime=187
[2024-05-19 07:40:14] + echo exitcode=2
[2024-05-19 07:40:14] + exit 2
[2024-05-19 07:40:14] ./log.38776146._010305.job.log.1
[2024-05-19 07:40:14] ./PanDA_Pilot-6205991928/prmon.log
[2024-05-19 07:40:14] ./PanDA_Pilot-6205991928/log.EVNTtoHITS
[2024-05-19 07:40:14] ./PanDA_Pilot-6205991928/PoolFileCatalog.xml
[2024-05-19 07:40:14] ./PanDA_Pilot-6205991928/pilotlog.txt
[2024-05-19 07:40:14] ./pilot3/pilot/util/loggingsupport.py
[2024-05-19 07:40:14] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-19 07:40:14] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-19 07:40:14] ./pilot3/pilot/util/realtimelogger.py
[2024-05-19 07:40:14] ./runtime_log
[2024-05-19 07:40:14] ./runtime_log.err
[2024-05-19 07:40:14] ./pilotlog.txt
06:14:24 (2166092): wrapper (7.7.26015): starting
06:14:24 (2166092): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 06:14:24] Arguments: --nthreads 4
[2024-05-20 06:14:24] Threads: 4
[2024-05-20 06:14:24] This job has been restarted, cleaning up previous attempt
[2024-05-20 06:14:24] Checking for CVMFS
[2024-05-20 06:14:24] No cvmfs_config command found, will try listing directly
[2024-05-20 06:14:24] CVMFS is ok
[2024-05-20 06:14:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 06:14:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 06:14:24] Further information can be found at the LHC@home message board.
[2024-05-20 06:14:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 06:14:24] Checking for apptainer binary...
[2024-05-20 06:14:24] which: no apptainer in ((null))
[2024-05-20 06:14:24] apptainer is not installed, using version from CVMFS
[2024-05-20 06:14:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 06:14:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-20 06:14:26] apptainer works
[2024-05-20 06:14:26] Set ATHENA_PROC_NUMBER=4
[2024-05-20 06:14:26] Set ATHENA_CORE_NUMBER=4
[2024-05-20 06:14:26] Starting ATLAS job with PandaID=6205991928
[2024-05-20 06:14:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 06:17:33] Job failed
[2024-05-20 06:17:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-20 06:17:33] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/1/
[2024-05-20 06:17:33] + mv ATLAS.root_0 EVNT.38776140._000416.pool.root.1
[2024-05-20 06:17:33] mv: 'ATLAS.root_0' and 'EVNT.38776140._000416.pool.root.1' are the same file
[2024-05-20 06:17:33] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-20 06:17:33] + umask 077
[2024-05-20 06:17:33] ++ date +%s
[2024-05-20 06:17:33] + ACCOUNTING_STARTTIME=1716178466
[2024-05-20 06:17:33] + echo 'Detecting resource accounting method available for the job.'
[2024-05-20 06:17:33] Detecting resource accounting method available for the job.
[2024-05-20 06:17:33] + JOB_ACCOUNTING=
[2024-05-20 06:17:33] + command -v arc-job-cgroup
[2024-05-20 06:17:33] + '[' -z '' ']'
[2024-05-20 06:17:33] + GNU_TIME=/usr/bin/time
[2024-05-20 06:17:33] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-20 06:17:33] Looking for /usr/bin/time tool for accounting measurements
[2024-05-20 06:17:33] + '[' '!' -z /usr/bin/time ']'
[2024-05-20 06:17:33] + /usr/bin/time --version
[2024-05-20 06:17:33] + echo 'GNU time found and will be used for job accounting.'
[2024-05-20 06:17:33] GNU time found and will be used for job accounting.
[2024-05-20 06:17:33] + JOB_ACCOUNTING=gnutime
[2024-05-20 06:17:33] + '[' -z gnutime ']'
[2024-05-20 06:17:33] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 06:17:33] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-20 06:17:33] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-20 06:17:33] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-14/BOINC_MCORE/6205991928.out
[2024-05-20 06:17:33] + export PILOT_NOKILL=YES
[2024-05-20 06:17:33] + PILOT_NOKILL=YES
[2024-05-20 06:17:33] + export GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-20 06:17:33] + GRID_GLOBAL_JOBID=VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-20 06:17:33] + export GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-20 06:17:33] + GRID_GLOBAL_JOBURL=https://arc-boinc-03.cern.ch:443/arex/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo
[2024-05-20 06:17:33] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 06:17:33] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-20 06:17:33] + export GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-20 06:17:33] + GRID_GLOBAL_JOBHOST=arc-boinc-03.cern.ch
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/1
[2024-05-20 06:17:33] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/1/log.38776146._010305.job.log.1
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1.diag
[2024-05-20 06:17:33] + '[' '!' -z '' ']'
[2024-05-20 06:17:33] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-20 06:17:33] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-20 06:17:33] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-20 06:17:33] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-20 06:17:33] + '[' '!' -z '' ']'
[2024-05-20 06:17:33] + '[' -z yes ']'
[2024-05-20 06:17:33] ++ pwd
[2024-05-20 06:17:33] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-20 06:17:33] + runtimeenvironments=
[2024-05-20 06:17:33] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 06:17:33] + RTE_function_0 1
[2024-05-20 06:17:33] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 06:17:33] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 06:17:33] + export BOINC_APP=ATLAS
[2024-05-20 06:17:33] + BOINC_APP=ATLAS
[2024-05-20 06:17:33] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 06:17:33] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 06:17:33] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 06:17:33] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 06:17:33] + '[' -z 1 ']'
[2024-05-20 06:17:33] + '[' 1 == 1 ']'
[2024-05-20 06:17:33] + shift
[2024-05-20 06:17:33] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-20 06:17:33] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 06:17:33] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-20 06:17:33] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-20 06:17:33] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/1/
[2024-05-20 06:17:33] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-20 06:17:33] + grep '<use_http_proxy/>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-20 06:17:33] + '[' -e /scratch/boinc/var/slot8/slots/1/init_data.xml ']'
[2024-05-20 06:17:33] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot8/slots/1/init_data.xml
[2024-05-20 06:17:33] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-20 06:17:33] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 06:17:33] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-20 06:17:33] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 06:17:33] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-20 06:17:33] + '[' 0 -ne 0 ']'
[2024-05-20 06:17:33] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-20 06:17:33] + '[' -f /etc/os-release ']'
[2024-05-20 06:17:33] +++ cat /etc/os-release
[2024-05-20 06:17:33] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-20 06:17:33] +++ NAME='CentOS Linux'
[2024-05-20 06:17:33] +++ VERSION='7 (Core)'
[2024-05-20 06:17:33] +++ ID=centos
[2024-05-20 06:17:33] +++ ID_LIKE='rhel fedora'
[2024-05-20 06:17:33] +++ VERSION_ID=7
[2024-05-20 06:17:33] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-20 06:17:33] +++ ANSI_COLOR='0;31'
[2024-05-20 06:17:33] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-20 06:17:33] +++ HOME_URL=https://www.centos.org/
[2024-05-20 06:17:33] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-20 06:17:33] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-20 06:17:33] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-20 06:17:33] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-20 06:17:33] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-20 06:17:33] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-20 06:17:33] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-20 06:17:33] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-20 06:17:33] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-20 06:17:33] + HOME=/scratch/boinc/var/slot8/slots/1
[2024-05-20 06:17:33] + export HOME
[2024-05-20 06:17:33] + cd /scratch/boinc/var/slot8/slots/1
[2024-05-20 06:17:33] + '[' '!' -z '' ']'
[2024-05-20 06:17:33] + '[' -z '' ']'
[2024-05-20 06:17:33] ++ /bin/hostname -f
[2024-05-20 06:17:33] + nodename=skurut09.grid.cesnet.cz
[2024-05-20 06:17:33] + echo nodename=skurut09.grid.cesnet.cz
[2024-05-20 06:17:33] + echo Processors=1
[2024-05-20 06:17:33] + echo Benchmark=HEPSPEC:1.0
[2024-05-20 06:17:33] + executable=./runpilot2-wrapper.sh
[2024-05-20 06:17:33] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-20 06:17:33] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-20 06:17:33] ++ head -n 1
[2024-05-20 06:17:33] ++ tr -d '\0'
[2024-05-20 06:17:33] + line1='#!/bin/bash'
[2024-05-20 06:17:33] ++ echo '#!/bin/bash'
[2024-05-20 06:17:33] ++ sed -n 's/^#! *//p'
[2024-05-20 06:17:33] + shebang=/bin/bash
[2024-05-20 06:17:33] ++ echo /bin/bash
[2024-05-20 06:17:33] ++ awk '{print $1}'
[2024-05-20 06:17:33] + interpreter=/bin/bash
[2024-05-20 06:17:33] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-20 06:17:33] + '[' x/bin/bash = x ']'
[2024-05-20 06:17:33] + type /bin/bash
[2024-05-20 06:17:33] + '[' xgnutime = xgnutime ']'
[2024-05-20 06:17:33] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-20 06:17:33] + RESULT=2
[2024-05-20 06:17:33] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-20 06:17:33] ++ grep domain_name init_data.xml
[2024-05-20 06:17:33] ++ awk -F '>' '{print $2}'
[2024-05-20 06:17:33] ++ awk -F '<' '{print $1}'
[2024-05-20 06:17:33] ++ sed -e 's# #_#g'
[2024-05-20 06:17:33] + hostname=skurut09.grid.cesnet.cz
[2024-05-20 06:17:33] ++ grep user_name init_data.xml
[2024-05-20 06:17:33] ++ awk -F '>' '{print $2}'
[2024-05-20 06:17:33] ++ awk -F '<' '{print $1}'
[2024-05-20 06:17:33] ++ sed -e 's# #_#g'
[2024-05-20 06:17:33] + username=praguelcg2
[2024-05-20 06:17:33] + nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-20 06:17:33] + echo nodename=praguelcg2@skurut09.grid.cesnet.cz
[2024-05-20 06:17:33] + '[' -n 4 ']'
[2024-05-20 06:17:33] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/1/VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag
[2024-05-20 06:17:33] + echo exitcode=2
[2024-05-20 06:17:33] + runtimeenvironments=
[2024-05-20 06:17:33] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-20 06:17:33] + RTE_function_0 2
[2024-05-20 06:17:33] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 06:17:33] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-20 06:17:33] + export BOINC_APP=ATLAS
[2024-05-20 06:17:33] + BOINC_APP=ATLAS
[2024-05-20 06:17:33] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 06:17:33] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-20 06:17:33] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 06:17:33] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-20 06:17:33] + '[' -z 2 ']'
[2024-05-20 06:17:33] + '[' 2 == 1 ']'
[2024-05-20 06:17:33] + '[' 0 -ne 0 ']'
[2024-05-20 06:17:33] + echo 'zip all output files'
[2024-05-20 06:17:33] + flist='*.diag '
[2024-05-20 06:17:33] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-20 06:17:33] + '[' -e ./heartbeat.json ']'
[2024-05-20 06:17:33] + flist='*.diag ./heartbeat.json'
[2024-05-20 06:17:33] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-20 06:17:33] + '[' -e ./output.list ']'
[2024-05-20 06:17:33] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-20 06:17:33] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-20 06:17:33] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1'
[2024-05-20 06:17:33] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-20 06:17:33] + '[' -e ./log.38776146._010305.job.log.1 ']'
[2024-05-20 06:17:33] + flist='*.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1'
[2024-05-20 06:17:33] + for f in ./heartbeat.json ./output.list ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1 ./gmlog/
[2024-05-20 06:17:33] + '[' -e ./gmlog/ ']'
[2024-05-20 06:17:33] + '[' -f output.list ']'
[2024-05-20 06:17:33] + tar cvf result.tar.gz VOCLDm0iwQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmFmHKDm1P1NFo.diag ./heartbeat.json ./log.38776146._010305.job.log.1 ./log.38776146._010305.job.log.1
[2024-05-20 06:17:33] + '[' xgnutime = xcgroup ']'
[2024-05-20 06:17:33] + '[' -n '' ']'
[2024-05-20 06:17:33] + '[' -n '' ']'
[2024-05-20 06:17:33] ++ date +%s
[2024-05-20 06:17:33] + ACCOUNTING_ENDTIME=1716178652
[2024-05-20 06:17:33] ++ date -d '1970-01-01 UTC 1716178466 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 06:17:33] + echo LRMSStartTime=20240520061426Z
[2024-05-20 06:17:33] ++ date -d '1970-01-01 UTC 1716178652 seconds' +%Y%m%d%H%M%SZ
[2024-05-20 06:17:33] + echo LRMSEndTime=20240520061732Z
[2024-05-20 06:17:33] + echo walltime=186
[2024-05-20 06:17:33] + echo exitcode=2
[2024-05-20 06:17:33] + exit 2
[2024-05-20 06:17:33] ./log.38776146._010305.job.log.1
[2024-05-20 06:17:33] ./PanDA_Pilot-6205991928/prmon.log
[2024-05-20 06:17:33] ./PanDA_Pilot-6205991928/log.EVNTtoHITS
[2024-05-20 06:17:33] ./PanDA_Pilot-6205991928/PoolFileCatalog.xml
[2024-05-20 06:17:33] ./PanDA_Pilot-6205991928/pilotlog.txt
[2024-05-20 06:17:33] ./pilot3/pilot/util/loggingsupport.py
[2024-05-20 06:17:33] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-20 06:17:33] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-20 06:17:33] ./pilot3/pilot/util/realtimelogger.py
[2024-05-20 06:17:33] ./runtime_log
[2024-05-20 06:17:33] ./runtime_log.err
[2024-05-20 06:17:33] ./pilotlog.txt
06:27:33 (2166092): run_atlas exited; CPU time 12.500419
06:27:33 (2166092): app exit status: 0x1
06:27:33 (2166092): called boinc_finish(195)
</stderr_txt>
]]>
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