Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:34:28 (2728410): wrapper (7.7.26015): starting
09:34:28 (2728410): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 09:34:28] Arguments: --nthreads 4
[2024-05-19 09:34:28] Threads: 4
[2024-05-19 09:34:28] Checking for CVMFS
[2024-05-19 09:34:28] No cvmfs_config command found, will try listing directly
[2024-05-19 09:34:28] CVMFS is ok
[2024-05-19 09:34:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:34:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:34:28] Further information can be found at the LHC@home message board.
[2024-05-19 09:34:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:34:28] Checking for apptainer binary...
[2024-05-19 09:34:28] which: no apptainer in ((null))
[2024-05-19 09:34:28] apptainer is not installed, using version from CVMFS
[2024-05-19 09:34:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:34:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-19 09:34:29] apptainer works
[2024-05-19 09:34:29] Set ATHENA_PROC_NUMBER=4
[2024-05-19 09:34:29] Set ATHENA_CORE_NUMBER=4
[2024-05-19 09:34:29] Starting ATLAS job with PandaID=6205933587
[2024-05-19 09:34:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:04:12]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:04:12] 2024-05-19 11:03:57,681 | INFO     | fitting pss+swap vs Time
[2024-05-19 13:04:12] 2024-05-19 11:03:57,681 | INFO     | model: linear, x: [1716104100.0, 1716104161.0, 1716104222.0, 1716104283.0, 1716104344.0, 1716104405.0, 1716104466.0, 1716104527.0, 1716104588.0, 1716104649.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,681 | INFO     | sum of square deviations: 2710627567.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,682 | INFO     | sum of deviations: 69210795718.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,682 | INFO     | mean x: 1716110352.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,682 | INFO     | mean y: 2267710.276699029
[2024-05-19 13:04:12] 2024-05-19 11:03:57,682 | INFO     | -- intersect: -43815394465.58049
[2024-05-19 13:04:12] 2024-05-19 11:03:57,682 | INFO     | intersect: -43815394465.58049
[2024-05-19 13:04:12] 2024-05-19 11:03:57,683 | INFO     | chi2: 4.686567717327264
[2024-05-19 13:04:12] 2024-05-19 11:03:57,683 | INFO     | model: linear, x: [1716104100.0, 1716104161.0, 1716104222.0, 1716104283.0, 1716104344.0, 1716104405.0, 1716104466.0, 1716104527.0, 1716104588.0, 1716104649.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,683 | INFO     | sum of square deviations: 2518000700.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | sum of deviations: 80218045974.00002
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | mean x: 1716110200.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | mean y: 2276220.895522388
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | -- intersect: -54669276062.64847
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | intersect: -54669276062.64847
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | chi2: 3.8987784572941226
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | current chi2=3.8987784572941226 (change=16.80951407403147 %)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | right removable region: 200
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | model: linear, x: [1716104405.0, 1716104466.0, 1716104527.0, 1716104588.0, 1716104649.0, 1716104710.0, 1716104771.0, 1716104832.0, 1716104893.0, 1716104954.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,684 | INFO     | sum of square deviations: 2518000700.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | sum of deviations: 22912820427.000023
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | mean x: 1716110505.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | mean y: 2304256.6666666665
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | -- intersect: -15613629382.253023
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | intersect: -15613629382.253023
[2024-05-19 13:04:12] 2024-05-19 11:03:57,685 | INFO     | chi2: 2.2739685508713006
[2024-05-19 13:04:12] 2024-05-19 11:03:57,686 | INFO     | current chi2=2.2739685508713006 (change=51.47902072418709 %)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,686 | INFO     | model: linear, x: [1716104710.0, 1716104771.0, 1716104832.0, 1716104893.0, 1716104954.0, 1716105015.0, 1716105076.0, 1716105137.0, 1716105198.0, 1716105259.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,686 | INFO     | sum of square deviations: 2334722845.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | sum of deviations: -13848360300.000002
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | mean x: 1716110657.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | mean y: 2334847.775510204
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | -- intersect: 10181409743.378334
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | intersect: 10181409743.378334
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | chi2: 0.8834047460083103
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | current chi2=0.8834047460083103 (change=61.15140881478671 %)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | model: linear, x: [1716105015.0, 1716105076.0, 1716105137.0, 1716105198.0, 1716105259.0, 1716105320.0, 1716105381.0, 1716105442.0, 1716105503.0, 1716105564.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,687 | INFO     | sum of square deviations: 2160561440.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | sum of deviations: -17483365001.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | mean x: 1716110810.0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | mean y: 2337977.884816754
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | -- intersect: 13889187533.707567
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | intersect: 13889187533.707567
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | chi2: 0.8439753128836791
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | current chi2=0.8439753128836791 (change=4.463348572983588 %)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | left removable region: 30
[2024-05-19 13:04:12] 2024-05-19 11:03:57,688 | INFO     | model: linear, x: [1716105930.0, 1716105991.0, 1716106052.0, 1716106113.0, 1716106174.0, 1716106235.0, 1716106296.0, 1716106357.0, 1716106418.0, 1716106479.0, 1716
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | sum of square deviations: 1523386702.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | sum of deviations: -245284598.99999896
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | mean x: 1716111084.5
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | mean y: 2343847.3411764707
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | -- intersect: 278659518.542879
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | intersect: 278659518.542879
[2024-05-19 13:04:12] 2024-05-19 11:03:57,689 | INFO     | chi2: 0.005136443917812609
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | -- intersect: 278659518.542879
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | current memory leak: -0.16 B/s (using 170 data points, chi2=0.01)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | ..............................
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | . Timing measurements:
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | . get job = 0 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | . initial setup = 1 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,690 | INFO     | . payload setup = 4 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,691 | INFO     | . stage-in = 0 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,691 | INFO     | . payload execution = 12528 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,691 | INFO     | . stage-out = 0 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,691 | INFO     | . log creation = 0 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,691 | INFO     | ..............................
[2024-05-19 13:04:12] 2024-05-19 11:03:57,792 | INFO     | 
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | job summary report
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | --------------------------------------------------
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | PanDA job id: 6205933587
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | task id: 38776125
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | errors: (none)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | pilot state: finished 
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | transexitcode: 0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | exeerrorcode: 0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | exeerrordiag: 
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | exitcode: 0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | exitmsg: OK
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | cpuconsumptiontime: 47292 s
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | nevents: 400
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | neventsw: 0
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | pid: 2740438
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | pgrp: 2740438
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | corecount: 4
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | event service: False
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | sizes: {0: 2392099, 1: 2392213, 4: 2392447, 11: 2392475, 12536: 2422335, 12538: 2431317, 12540: 2431501, 12547: 2431671}
[2024-05-19 13:04:12] 2024-05-19 11:03:57,793 | INFO     | --------------------------------------------------
[2024-05-19 13:04:12] 2024-05-19 11:03:57,794 | INFO     | 
[2024-05-19 13:04:12] 2024-05-19 11:03:57,794 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-05-19 13:04:12] 2024-05-19 11:03:57,811 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | job 6205933587 has completed (purged errors)
[2024-05-19 13:04:12] 2024-05-19 11:03:57,813 | INFO     | overall cleanup function is called
[2024-05-19 13:04:12] 2024-05-19 11:03:58,819 | INFO     | --- collectZombieJob: --- 10, [2740438]
[2024-05-19 13:04:12] 2024-05-19 11:03:58,819 | INFO     | zombie collector waiting for pid 2740438
[2024-05-19 13:04:12] 2024-05-19 11:03:58,819 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:04:12] 2024-05-19 11:03:59,823 | INFO     | collected zombie processes
[2024-05-19 13:04:12] 2024-05-19 11:03:59,824 | INFO     | will now attempt to kill all subprocesses of pid=2740438
[2024-05-19 13:04:12] 2024-05-19 11:03:59,998 | INFO     | process IDs to be killed: [2740438] (in reverse order)
[2024-05-19 13:04:12] 2024-05-19 11:04:00,121 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:04:12] 2024-05-19 11:04:00,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:04:12] 2024-05-19 11:04:00,131 | INFO     | did not find any defunct processes belonging to 2740438
[2024-05-19 13:04:12] 2024-05-19 11:04:00,139 | INFO     | did not find any defunct processes belonging to 2740438
[2024-05-19 13:04:12] 2024-05-19 11:04:00,139 | INFO     | ready for new job
[2024-05-19 13:04:12] 2024-05-19 11:04:00,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:04:12] 2024-05-19 11:04:00,140 | INFO     | *************************************
[2024-05-19 13:04:12] 2024-05-19 11:04:00,141 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:04:12] 2024-05-19 11:04:00,141 | INFO     | *************************************
[2024-05-19 13:04:12] 2024-05-19 11:04:00,141 | INFO     | 
[2024-05-19 13:04:12] 2024-05-19 11:04:00,143 | INFO     | architecture information:
[2024-05-19 13:04:12] 2024-05-19 11:04:00,144 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:04:12] 2024-05-19 11:04:00,163 | INFO     | cat /etc/os-release:
[2024-05-19 13:04:12] NAME="CentOS Linux"
[2024-05-19 13:04:12] VERSION="7 (Core)"
[2024-05-19 13:04:12] ID="centos"
[2024-05-19 13:04:12] ID_LIKE="rhel fedora"
[2024-05-19 13:04:12] VERSION_ID="7"
[2024-05-19 13:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:04:12] ANSI_COLOR="0;31"
[2024-05-19 13:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:04:12] HOME_URL="https://www.centos.org/"
[2024-05-19 13:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:04:12] 
[2024-05-19 13:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:04:12] 
[2024-05-19 13:04:12] 2024-05-19 11:04:00,163 | INFO     | *************************************
[2024-05-19 13:04:12] 2024-05-19 11:04:00,666 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-05-19 13:04:12] 2024-05-19 11:04:00,689 | INFO     | sufficient remaining disk space (575607406592 B)
[2024-05-19 13:04:12] 2024-05-19 11:04:00,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:04:12] 2024-05-19 11:04:00,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:04:12] 2024-05-19 11:04:00,690 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 13:04:12] 2024-05-19 11:04:00,690 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:04:12] 2024-05-19 11:04:00,690 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:04:12] 2024-05-19 11:04:00,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:04:12] 2024-05-19 11:04:00,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:04:12] 2024-05-19 11:04:00,940 | INFO     | all data control threads have been joined
[2024-05-19 13:04:12] 2024-05-19 11:04:01,051 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 13:04:12] 2024-05-19 11:04:01,052 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 13:04:12] 2024-05-19 11:04:01,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:04:12] 2024-05-19 11:04:01,052 | INFO     | will abort loop
[2024-05-19 13:04:12] 2024-05-19 11:04:01,152 | INFO     | all job control threads have been joined
[2024-05-19 13:04:12] 2024-05-19 11:04:01,518 | INFO     | all payload control threads have been joined
[2024-05-19 13:04:12] 2024-05-19 11:04:01,537 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:04:12] 2024-05-19 11:04:01,695 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:01,853 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:01,929 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:01,946 | INFO     | [data] control thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,058 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,123 | INFO     | [job] validate thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,157 | INFO     | [job] control thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,253 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,361 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,509 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,524 | INFO     | [payload] control thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,540 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,696 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:02,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:04:12] 2024-05-19 11:04:03,069 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:03,762 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:05,542 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:04:12] 2024-05-19 11:04:06,731 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47817291220032)>', '<ExcThread(monitor, started 47817462470400)>']
[2024-05-19 13:04:12] 2024-05-19 11:04:07,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:04:12] 2024-05-19 11:04:07,718 | INFO     | [monitor] control thread has ended
[2024-05-19 13:04:12] 2024-05-19 11:04:11,756 | INFO     | all workflow threads have been joined
[2024-05-19 13:04:12] 2024-05-19 11:04:11,756 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:04:12] 2024-05-19 11:04:11,757 | INFO     | traces error code: 0
[2024-05-19 13:04:12] 2024-05-19 11:04:11,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:04:12] 2024-05-19 11:04:11,833 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:04:12] 2024-05-19 11:04:11,835 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:04:12] 2024-05-19 11:04:11,837 [wrapper] pilotpid: 2733368
[2024-05-19 13:04:12] 2024-05-19 11:04:11,839 [wrapper] Pilot exit status: 0
[2024-05-19 13:04:12] 2024-05-19 11:04:11,848 [wrapper] pandaids: 6205933587
[2024-05-19 13:04:12] 2024-05-19 11:04:11,917 [wrapper] cleanup: SIGTERM to supervisor_pilot 3217926 2733369
[2024-05-19 13:04:12] 2024-05-19 11:04:11,919 [wrapper] Test setup, not cleaning
[2024-05-19 13:04:12] 2024-05-19 11:04:11,921 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:04:12] 2024-05-19 11:04:11,923 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:04:12] 2024-05-19 11:04:11,927 [wrapper] apfmon messages muted
[2024-05-19 13:04:12]  *** Error codes and diagnostics ***
[2024-05-19 13:04:12]     "exeErrorCode": 0,
[2024-05-19 13:04:12]     "exeErrorDiag": "",
[2024-05-19 13:04:12]     "pilotErrorCode": 0,
[2024-05-19 13:04:12]     "pilotErrorDiag": "",
[2024-05-19 13:04:12]  *** Listing of results directory ***
[2024-05-19 13:04:12] total 831228
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc    467845 May 14 02:26 pilot3.tar.gz
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc      5633 May 14 02:35 queuedata.json
[2024-05-19 13:04:12] -rwx------ 1 boinc boinc     32251 May 14 02:36 runpilot2-wrapper.sh
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc       100 May 19 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:04:12] -rwxr-xr-x 1 boinc boinc      7986 May 19 08:47 run_atlas
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc       105 May 19 08:47 job.xml
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc      6663 May 19 09:34 init_data.xml
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc 598483592 May 19 09:34 EVNT.38776119._000358.pool.root.1
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc     17537 May 19 09:34 start_atlas.sh
[2024-05-19 13:04:12] drwxrwx--x 2 boinc boinc      4096 May 19 09:34 shared
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc    480008 May 19 09:34 input.tar.gz
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc         0 May 19 09:34 boinc_lockfile
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc      2641 May 19 09:34 pandaJob.out
[2024-05-19 13:04:12] -rw------- 1 boinc boinc       424 May 19 09:34 setup.sh.local
[2024-05-19 13:04:12] -rw------- 1 boinc boinc   1013987 May 19 09:34 agis_schedconf.cvmfs.json
[2024-05-19 13:04:12] -rw------- 1 boinc boinc   1324701 May 19 09:34 cric_ddmendpoints.json
[2024-05-19 13:04:12] drwx------ 4 boinc boinc      4096 May 19 09:34 pilot3
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc       531 May 19 13:03 boinc_task_state.xml
[2024-05-19 13:04:12] -rw------- 1 boinc boinc        95 May 19 13:03 pilot_heartbeat.json
[2024-05-19 13:04:12] -rw------- 1 boinc boinc 245883360 May 19 13:03 HITS.38776125._008574.pool.root.1
[2024-05-19 13:04:12] -rw------- 1 boinc boinc      1062 May 19 13:03 memory_monitor_summary.json
[2024-05-19 13:04:12] -rw------- 1 boinc boinc         0 May 19 13:03 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:04:12] -rw------- 1 boinc boinc    324114 May 19 13:03 log.38776125._008574.job.log.tgz.1
[2024-05-19 13:04:12] -rw------- 1 boinc boinc      7760 May 19 13:03 heartbeat.json
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc        28 May 19 13:03 wrapper_checkpoint.txt
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc      8192 May 19 13:03 boinc_mmap_file
[2024-05-19 13:04:12] -rw------- 1 boinc boinc      4530 May 19 13:04 pilotlog.txt
[2024-05-19 13:04:12] -rw------- 1 boinc boinc   1311783 May 19 13:04 log.38776125._008574.job.log.1
[2024-05-19 13:04:12] -rw------- 1 boinc boinc       357 May 19 13:04 output.list
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc       620 May 19 13:04 runtime_log
[2024-05-19 13:04:12] -rw------- 1 boinc boinc   1658880 May 19 13:04 result.tar.gz
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc     11410 May 19 13:04 runtime_log.err
[2024-05-19 13:04:12] -rw------- 1 boinc boinc       657 May 19 13:04 VCGODmZKvQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmCgHKDmPBbttn.diag
[2024-05-19 13:04:12] -rw-r--r-- 1 boinc boinc     21372 May 19 13:04 stderr.txt
[2024-05-19 13:04:12] HITS file was successfully produced:
[2024-05-19 13:04:12] -rw------- 1 boinc boinc 245883360 May 19 13:03 shared/HITS.pool.root.1
[2024-05-19 13:04:12]  *** Contents of shared directory: ***
[2024-05-19 13:04:12] total 826704
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc 598483592 May 19 09:34 ATLAS.root_0
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc     17537 May 19 09:34 start_atlas.sh
[2024-05-19 13:04:12] -rw-r--r-- 2 boinc boinc    480008 May 19 09:34 input.tar.gz
[2024-05-19 13:04:12] -rw------- 1 boinc boinc 245883360 May 19 13:03 HITS.pool.root.1
[2024-05-19 13:04:12] -rw------- 1 boinc boinc   1658880 May 19 13:04 result.tar.gz
13:04:14 (2728410): run_atlas exited; CPU time 47002.197534
13:04:14 (2728410): called boinc_finish(0)

</stderr_txt>
]]>

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