Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:45:47 (1246914): wrapper (7.7.26015): starting
10:45:47 (1246914): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 10:45:47] Arguments: --nthreads 4
[2024-05-16 10:45:47] Threads: 4
[2024-05-16 10:45:47] Checking for CVMFS
[2024-05-16 10:45:47] No cvmfs_config command found, will try listing directly
[2024-05-16 10:45:47] CVMFS is ok
[2024-05-16 10:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 10:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 10:45:47] Further information can be found at the LHC@home message board.
[2024-05-16 10:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 10:45:47] Checking for apptainer binary...
[2024-05-16 10:45:47] which: no apptainer in ((null))
[2024-05-16 10:45:47] apptainer is not installed, using version from CVMFS
[2024-05-16 10:45:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 10:45:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-16 10:45:48] apptainer works
[2024-05-16 10:45:48] Set ATHENA_PROC_NUMBER=4
[2024-05-16 10:45:48] Set ATHENA_CORE_NUMBER=4
[2024-05-16 10:45:48] Starting ATLAS job with PandaID=6205932584
[2024-05-16 10:45:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 14:05:45]  *** The last 200 lines of the pilot log: ***
[2024-05-16 14:05:45] 2024-05-16 12:05:24,123 | INFO     | chi2: 4.1984139370752045
[2024-05-16 14:05:45] 2024-05-16 12:05:24,123 | INFO     | model: linear, x: [1715849185.0, 1715849246.0, 1715849307.0, 1715849368.0, 1715849429.0, 1715849490.0, 1715849551.0, 1715849612.0, 1715849673.0, 1715849734.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,123 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,124 | INFO     | sum of deviations: 89347230334.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | mean x: 1715854980.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | mean y: 2263468.67539267
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | -- intersect: -70954705067.15155
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | intersect: -70954705067.15155
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | chi2: 4.198482298405497
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | current chi2=4.198482298405497 (change=-0.001628265609754425 %)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | right removable region: 190
[2024-05-16 14:05:45] 2024-05-16 12:05:24,125 | INFO     | model: linear, x: [1715849490.0, 1715849551.0, 1715849612.0, 1715849673.0, 1715849734.0, 1715849795.0, 1715849856.0, 1715849917.0, 1715849978.0, 1715850039.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,126 | INFO     | sum of square deviations: 2160561440.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | sum of deviations: 46408568627.00001
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | mean x: 1715855285.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | mean y: 2305868.994764398
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | -- intersect: -36854034466.28547
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | intersect: -36854034466.28547
[2024-05-16 14:05:45] 2024-05-16 12:05:24,127 | INFO     | chi2: 1.6286371582213295
[2024-05-16 14:05:45] 2024-05-16 12:05:24,128 | INFO     | current chi2=1.6286371582213295 (change=61.208275729098105 %)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,128 | INFO     | model: linear, x: [1715849795.0, 1715849856.0, 1715849917.0, 1715849978.0, 1715850039.0, 1715850100.0, 1715850161.0, 1715850222.0, 1715850283.0, 1715850344.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,128 | INFO     | sum of square deviations: 1995283922.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,129 | INFO     | sum of deviations: 9136125885.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,129 | INFO     | mean x: 1715855437.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,129 | INFO     | mean y: 2340265.85483871
[2024-05-16 14:05:45] 2024-05-16 12:05:24,129 | INFO     | -- intersect: -7854321686.634621
[2024-05-16 14:05:45] 2024-05-16 12:05:24,129 | INFO     | intersect: -7854321686.634621
[2024-05-16 14:05:45] 2024-05-16 12:05:24,130 | INFO     | chi2: 0.0687839318143977
[2024-05-16 14:05:45] 2024-05-16 12:05:24,130 | INFO     | current chi2=0.0687839318143977 (change=95.77659569737939 %)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,130 | INFO     | model: linear, x: [1715850100.0, 1715850161.0, 1715850222.0, 1715850283.0, 1715850344.0, 1715850405.0, 1715850466.0, 1715850527.0, 1715850588.0, 1715850649.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,130 | INFO     | sum of square deviations: 1838657730.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,131 | INFO     | sum of deviations: 4207940368.9999995
[2024-05-16 14:05:45] 2024-05-16 12:05:24,131 | INFO     | mean x: 1715855590.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,131 | INFO     | mean y: 2344987.193370166
[2024-05-16 14:05:45] 2024-05-16 12:05:24,131 | INFO     | -- intersect: -3924551186.427433
[2024-05-16 14:05:45] 2024-05-16 12:05:24,132 | INFO     | intersect: -3924551186.427433
[2024-05-16 14:05:45] 2024-05-16 12:05:24,132 | INFO     | chi2: 0.0018130118564731595
[2024-05-16 14:05:45] 2024-05-16 12:05:24,132 | INFO     | current chi2=0.0018130118564731595 (change=97.36419275745202 %)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,132 | INFO     | model: linear, x: [1715850405.0, 1715850466.0, 1715850527.0, 1715850588.0, 1715850649.0, 1715850710.0, 1715850771.0, 1715850832.0, 1715850893.0, 1715850954.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,132 | INFO     | sum of square deviations: 1690450300.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,133 | INFO     | sum of deviations: 4034391007.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,133 | INFO     | mean x: 1715855742.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,133 | INFO     | mean y: 2345163.8011363638
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | -- intersect: -4092677906.506956
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | intersect: -4092677906.506956
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | chi2: 0.0017568826277373968
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | current chi2=0.0017568826277373968 (change=3.0959107374482713 %)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | left removable region: 40
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | model: linear, x: [1715851625.0, 1715851686.0, 1715851747.0, 1715851808.0, 1715851869.0, 1715851930.0, 1715851991.0, 1715852052.0, 1715852113.0, 1715852174.0, 1715
[2024-05-16 14:05:45] 2024-05-16 12:05:24,134 | INFO     | sum of square deviations: 1046484737.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,135 | INFO     | sum of deviations: 3205917647.0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,135 | INFO     | mean x: 1715856169.5
[2024-05-16 14:05:45] 2024-05-16 12:05:24,135 | INFO     | mean y: 2345234.1733333333
[2024-05-16 14:05:45] 2024-05-16 12:05:24,135 | INFO     | -- intersect: -5254199248.888345
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | intersect: -5254199248.888345
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | chi2: 0.0003374612968051183
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | -- intersect: -5254199248.888345
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | current memory leak: 3.06 B/s (using 150 data points, chi2=0.00)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | ..............................
[2024-05-16 14:05:45] 2024-05-16 12:05:24,136 | INFO     | . Timing measurements:
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . get job = 0 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . initial setup = 1 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . payload setup = 6 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . stage-in = 0 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . payload execution = 11932 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . stage-out = 0 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | . log creation = 0 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,137 | INFO     | ..............................
[2024-05-16 14:05:45] 2024-05-16 12:05:24,232 | INFO     | 
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | job summary report
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | --------------------------------------------------
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | PanDA job id: 6205932584
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | task id: 38776125
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | errors: (none)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | pilot state: finished 
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | transexitcode: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | exeerrorcode: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,233 | INFO     | exeerrordiag: 
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | exitcode: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | exitmsg: OK
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | cpuconsumptiontime: 45089 s
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | nevents: 400
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | neventsw: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | pid: 1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | pgrp: 1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | corecount: 4
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | event service: False
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | sizes: {0: 2392034, 1: 2392233, 6: 2392439, 12: 2392467, 11942: 2422052, 11943: 2431034, 11944: 2431218, 11950: 2431388}
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | --------------------------------------------------
[2024-05-16 14:05:45] 2024-05-16 12:05:24,234 | INFO     | 
[2024-05-16 14:05:45] 2024-05-16 12:05:24,235 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 14:05:45] 2024-05-16 12:05:24,261 | INFO     | job 6205932584 has completed (purged errors)
[2024-05-16 14:05:45] 2024-05-16 12:05:24,262 | INFO     | overall cleanup function is called
[2024-05-16 14:05:45] 2024-05-16 12:05:25,269 | INFO     | --- collectZombieJob: --- 10, [1266168]
[2024-05-16 14:05:45] 2024-05-16 12:05:25,270 | INFO     | zombie collector waiting for pid 1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:25,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 14:05:45] 2024-05-16 12:05:26,274 | INFO     | collected zombie processes
[2024-05-16 14:05:45] 2024-05-16 12:05:26,274 | INFO     | will now attempt to kill all subprocesses of pid=1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:26,488 | INFO     | process IDs to be killed: [1266168] (in reverse order)
[2024-05-16 14:05:45] 2024-05-16 12:05:26,650 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 14:05:45] 2024-05-16 12:05:26,650 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 14:05:45] 2024-05-16 12:05:26,669 | INFO     | did not find any defunct processes belonging to 1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:26,684 | INFO     | did not find any defunct processes belonging to 1266168
[2024-05-16 14:05:45] 2024-05-16 12:05:26,684 | INFO     | ready for new job
[2024-05-16 14:05:45] 2024-05-16 12:05:26,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 14:05:45] 2024-05-16 12:05:26,686 | INFO     | *************************************
[2024-05-16 14:05:45] 2024-05-16 12:05:26,686 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 14:05:45] 2024-05-16 12:05:26,686 | INFO     | *************************************
[2024-05-16 14:05:45] 2024-05-16 12:05:26,686 | INFO     | 
[2024-05-16 14:05:45] 2024-05-16 12:05:26,691 | INFO     | architecture information:
[2024-05-16 14:05:45] 2024-05-16 12:05:26,691 | INFO     | executing command: cat /etc/os-release
[2024-05-16 14:05:45] 2024-05-16 12:05:26,710 | INFO     | cat /etc/os-release:
[2024-05-16 14:05:45] NAME="CentOS Linux"
[2024-05-16 14:05:45] VERSION="7 (Core)"
[2024-05-16 14:05:45] ID="centos"
[2024-05-16 14:05:45] ID_LIKE="rhel fedora"
[2024-05-16 14:05:45] VERSION_ID="7"
[2024-05-16 14:05:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 14:05:45] ANSI_COLOR="0;31"
[2024-05-16 14:05:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 14:05:45] HOME_URL="https://www.centos.org/"
[2024-05-16 14:05:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 14:05:45] 
[2024-05-16 14:05:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 14:05:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 14:05:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 14:05:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 14:05:45] 
[2024-05-16 14:05:45] 2024-05-16 12:05:26,710 | INFO     | *************************************
[2024-05-16 14:05:45] 2024-05-16 12:05:27,212 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-16 14:05:45] 2024-05-16 12:05:27,235 | INFO     | sufficient remaining disk space (2979183722496 B)
[2024-05-16 14:05:45] 2024-05-16 12:05:27,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 14:05:45] 2024-05-16 12:05:27,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 14:05:45] 2024-05-16 12:05:27,236 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 14:05:45] 2024-05-16 12:05:27,236 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 14:05:45] 2024-05-16 12:05:27,236 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 14:05:45] 2024-05-16 12:05:27,236 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 14:05:45] 2024-05-16 12:05:27,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:05:45] 2024-05-16 12:05:27,448 | INFO     | aborting loop
[2024-05-16 14:05:45] 2024-05-16 12:05:27,536 | INFO     | all data control threads have been joined
[2024-05-16 14:05:45] 2024-05-16 12:05:27,557 | INFO     | all job control threads have been joined
[2024-05-16 14:05:45] 2024-05-16 12:05:27,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 14:05:45] 2024-05-16 12:05:28,061 | INFO     | all payload control threads have been joined
[2024-05-16 14:05:45] 2024-05-16 12:05:28,240 | INFO     | [job] retrieve thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:28,321 | INFO     | [payload] validate_post thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:28,452 | INFO     | [job] job monitor thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:28,541 | INFO     | [data] control thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:28,562 | INFO     | [job] control thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:28,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 14:05:45] 2024-05-16 12:05:29,000 | INFO     | [data] copytool_in thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,013 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,066 | INFO     | [payload] control thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,105 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,150 | INFO     | [payload] failed_post thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,198 | INFO     | [job] validate thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:05:45] 2024-05-16 12:05:29,517 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:29,574 | INFO     | [data] copytool_out thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:30,247 | INFO     | [job] queue monitor thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:32,602 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:37,575 | INFO     | job.realtimelogging is not enabled
[2024-05-16 14:05:45] 2024-05-16 12:05:38,580 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 14:05:45] 2024-05-16 12:05:39,278 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47514969936960)>', '<ExcThread(monitor, started 47515147491072)>']
[2024-05-16 14:05:45] 2024-05-16 12:05:39,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 14:05:45] 2024-05-16 12:05:39,298 | INFO     | [monitor] control thread has ended
[2024-05-16 14:05:45] 2024-05-16 12:05:44,303 | INFO     | all workflow threads have been joined
[2024-05-16 14:05:45] 2024-05-16 12:05:44,303 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 14:05:45] 2024-05-16 12:05:44,304 | INFO     | traces error code: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:44,304 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 14:05:45] 2024-05-16 12:05:44,377 [wrapper] ==== pilot stdout END ====
[2024-05-16 14:05:45] 2024-05-16 12:05:44,380 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 14:05:45] 2024-05-16 12:05:44,383 [wrapper] pilotpid: 1251635
[2024-05-16 14:05:45] 2024-05-16 12:05:44,385 [wrapper] Pilot exit status: 0
[2024-05-16 14:05:45] 2024-05-16 12:05:44,395 [wrapper] pandaids: 6205932584
[2024-05-16 14:05:45] 2024-05-16 12:05:44,524 [wrapper] cleanup: SIGTERM to supervisor_pilot 2405494 1251636
[2024-05-16 14:05:45] 2024-05-16 12:05:44,527 [wrapper] Test setup, not cleaning
[2024-05-16 14:05:45] 2024-05-16 12:05:44,530 [wrapper] ==== wrapper stdout END ====
[2024-05-16 14:05:45] 2024-05-16 12:05:44,532 [wrapper] ==== wrapper stderr END ====
[2024-05-16 14:05:45] 2024-05-16 12:05:44,536 [wrapper] apfmon messages muted
[2024-05-16 14:05:45]  *** Error codes and diagnostics ***
[2024-05-16 14:05:45]     "exeErrorCode": 0,
[2024-05-16 14:05:45]     "exeErrorDiag": "",
[2024-05-16 14:05:45]     "pilotErrorCode": 0,
[2024-05-16 14:05:45]     "pilotErrorDiag": "",
[2024-05-16 14:05:45]  *** Listing of results directory ***
[2024-05-16 14:05:45] total 833148
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc    467845 May 14 00:54 pilot3.tar.gz
[2024-05-16 14:05:45] -rwx------ 1 boinc boinc     32251 May 14 01:19 runpilot2-wrapper.sh
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc      5633 May 14 01:19 queuedata.json
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc       100 May 16 10:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 14:05:45] -rwxr-xr-x 1 boinc boinc      7986 May 16 10:45 run_atlas
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc       105 May 16 10:45 job.xml
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc      6644 May 16 10:45 init_data.xml
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc 603065235 May 16 10:45 EVNT.38776119._000305.pool.root.1
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc     17537 May 16 10:45 start_atlas.sh
[2024-05-16 14:05:45] drwxrwx--x 2 boinc boinc      4096 May 16 10:45 shared
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc    480007 May 16 10:45 input.tar.gz
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc         0 May 16 10:45 boinc_lockfile
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc      2633 May 16 10:45 pandaJob.out
[2024-05-16 14:05:45] -rw------- 1 boinc boinc       424 May 16 10:45 setup.sh.local
[2024-05-16 14:05:45] -rw------- 1 boinc boinc   1010257 May 16 10:45 agis_schedconf.cvmfs.json
[2024-05-16 14:05:45] -rw------- 1 boinc boinc   1324701 May 16 10:45 cric_ddmendpoints.json
[2024-05-16 14:05:45] drwx------ 4 boinc boinc      4096 May 16 10:45 pilot3
[2024-05-16 14:05:45] -rw------- 1 boinc boinc        95 May 16 14:04 pilot_heartbeat.json
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc       531 May 16 14:04 boinc_task_state.xml
[2024-05-16 14:05:45] -rw------- 1 boinc boinc 243436666 May 16 14:04 HITS.38776125._007718.pool.root.1
[2024-05-16 14:05:45] -rw------- 1 boinc boinc      1037 May 16 14:05 memory_monitor_summary.json
[2024-05-16 14:05:45] -rw------- 1 boinc boinc         0 May 16 14:05 agis_ddmendpoints.agis.ALL.json
[2024-05-16 14:05:45] -rw------- 1 boinc boinc    318473 May 16 14:05 log.38776125._007718.job.log.tgz.1
[2024-05-16 14:05:45] -rw------- 1 boinc boinc      7713 May 16 14:05 heartbeat.json
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc        28 May 16 14:05 wrapper_checkpoint.txt
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc      8192 May 16 14:05 boinc_mmap_file
[2024-05-16 14:05:45] -rw------- 1 boinc boinc      4417 May 16 14:05 pilotlog.txt
[2024-05-16 14:05:45] -rw------- 1 boinc boinc   1243659 May 16 14:05 log.38776125._007718.job.log.1
[2024-05-16 14:05:45] -rw------- 1 boinc boinc       357 May 16 14:05 output.list
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc       620 May 16 14:05 runtime_log
[2024-05-16 14:05:45] -rw------- 1 boinc boinc   1576960 May 16 14:05 result.tar.gz
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc     11410 May 16 14:05 runtime_log.err
[2024-05-16 14:05:45] -rw------- 1 boinc boinc       658 May 16 14:05 MpNKDmx7tQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmygXKDm1GFfVn.diag
[2024-05-16 14:05:45] -rw-r--r-- 1 boinc boinc     21360 May 16 14:05 stderr.txt
[2024-05-16 14:05:45] HITS file was successfully produced:
[2024-05-16 14:05:45] -rw------- 1 boinc boinc 243436666 May 16 14:04 shared/HITS.pool.root.1
[2024-05-16 14:05:45]  *** Contents of shared directory: ***
[2024-05-16 14:05:45] total 828704
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc 603065235 May 16 10:45 ATLAS.root_0
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc     17537 May 16 10:45 start_atlas.sh
[2024-05-16 14:05:45] -rw-r--r-- 2 boinc boinc    480007 May 16 10:45 input.tar.gz
[2024-05-16 14:05:45] -rw------- 1 boinc boinc 243436666 May 16 14:04 HITS.pool.root.1
[2024-05-16 14:05:45] -rw------- 1 boinc boinc   1576960 May 16 14:05 result.tar.gz
14:05:47 (1246914): run_atlas exited; CPU time 44783.293151
14:05:47 (1246914): called boinc_finish(0)

</stderr_txt>
]]>

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