Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:48:04 (1455480): wrapper (7.7.26015): starting
13:48:04 (1455480): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 13:48:04] Arguments: --nthreads 4
[2024-05-16 13:48:04] Threads: 4
[2024-05-16 13:48:04] Checking for CVMFS
[2024-05-16 13:48:04] No cvmfs_config command found, will try listing directly
[2024-05-16 13:48:04] CVMFS is ok
[2024-05-16 13:48:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 13:48:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 13:48:04] Further information can be found at the LHC@home message board.
[2024-05-16 13:48:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 13:48:04] Checking for apptainer binary...
[2024-05-16 13:48:04] which: no apptainer in ((null))
[2024-05-16 13:48:04] apptainer is not installed, using version from CVMFS
[2024-05-16 13:48:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 13:48:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-16 13:48:05] apptainer works
[2024-05-16 13:48:05] Set ATHENA_PROC_NUMBER=4
[2024-05-16 13:48:05] Set ATHENA_CORE_NUMBER=4
[2024-05-16 13:48:05] Starting ATLAS job with PandaID=6205932527
[2024-05-16 13:48:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:05:12]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:05:12] 2024-05-16 15:04:56,326 | INFO     | intersect: -68113319134.02534
[2024-05-16 17:05:12] 2024-05-16 15:04:56,326 | INFO     | chi2: 4.298452071654986
[2024-05-16 17:05:12] 2024-05-16 15:04:56,326 | INFO     | model: linear, x: [1715860126.0, 1715860187.0, 1715860248.0, 1715860309.0, 1715860370.0, 1715860431.0, 1715860492.0, 1715860553.0, 1715860614.0, 1715860675.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,326 | INFO     | sum of square deviations: 2060343747.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,327 | INFO     | sum of deviations: 85963340245.99998
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | mean x: 1715865829.5
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | mean y: 2258263.5319148935
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | -- intersect: -71588493683.83888
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | intersect: -71588493683.83888
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | chi2: 4.298296038916789
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | current chi2=4.298296038916789 (change=0.0036299750607072766 %)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,328 | INFO     | right removable region: 187
[2024-05-16 17:05:12] 2024-05-16 15:04:56,329 | INFO     | model: linear, x: [1715860431.0, 1715860492.0, 1715860553.0, 1715860614.0, 1715860675.0, 1715860736.0, 1715860797.0, 1715860858.0, 1715860919.0, 1715860980.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,329 | INFO     | sum of square deviations: 2060343747.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,330 | INFO     | sum of deviations: 43028032929.00001
[2024-05-16 17:05:12] 2024-05-16 15:04:56,330 | INFO     | mean x: 1715866134.5
[2024-05-16 17:05:12] 2024-05-16 15:04:56,330 | INFO     | mean y: 2301506.85106383
[2024-05-16 17:05:12] 2024-05-16 15:04:56,330 | INFO     | -- intersect: -35831692041.32454
[2024-05-16 17:05:12] 2024-05-16 15:04:56,330 | INFO     | intersect: -35831692041.32454
[2024-05-16 17:05:12] 2024-05-16 15:04:56,331 | INFO     | chi2: 1.6591103627911015
[2024-05-16 17:05:12] 2024-05-16 15:04:56,331 | INFO     | current chi2=1.6591103627911015 (change=61.402143489474525 %)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,331 | INFO     | model: linear, x: [1715860736.0, 1715860797.0, 1715860858.0, 1715860919.0, 1715860980.0, 1715861041.0, 1715861102.0, 1715861163.0, 1715861224.0, 1715861285.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,331 | INFO     | sum of square deviations: 1900284932.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,332 | INFO     | sum of deviations: 6223239032.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,332 | INFO     | mean x: 1715866287.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,332 | INFO     | mean y: 2336578.180327869
[2024-05-16 17:05:12] 2024-05-16 15:04:56,332 | INFO     | -- intersect: -5616950230.410393
[2024-05-16 17:05:12] 2024-05-16 15:04:56,332 | INFO     | intersect: -5616950230.410393
[2024-05-16 17:05:12] 2024-05-16 15:04:56,333 | INFO     | chi2: 0.07217468395431338
[2024-05-16 17:05:12] 2024-05-16 15:04:56,333 | INFO     | current chi2=0.07217468395431338 (change=95.6497960851203 %)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,333 | INFO     | model: linear, x: [1715861041.0, 1715861102.0, 1715861163.0, 1715861224.0, 1715861285.0, 1715861346.0, 1715861407.0, 1715861468.0, 1715861529.0, 1715861590.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,333 | INFO     | sum of square deviations: 1748737904.5
[2024-05-16 17:05:12] 2024-05-16 15:04:56,334 | INFO     | sum of deviations: 580438332.5000001
[2024-05-16 17:05:12] 2024-05-16 15:04:56,334 | INFO     | mean x: 1715866439.5
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | mean y: 2342181.095505618
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | -- intersect: -567185506.4860455
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | intersect: -567185506.4860455
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | chi2: 0.0015715286460989595
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | current chi2=0.0015715286460989595 (change=97.82260404895749 %)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | model: linear, x: [1715861346.0, 1715861407.0, 1715861468.0, 1715861529.0, 1715861590.0, 1715861651.0, 1715861712.0, 1715861773.0, 1715861834.0, 1715861895.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,335 | INFO     | sum of square deviations: 1605470102.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,336 | INFO     | sum of deviations: 441207632.00000006
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | mean x: 1715866592.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | mean y: 2342324.9132947978
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | -- intersect: -469203943.6476318
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | intersect: -469203943.6476318
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | chi2: 0.0014690339426409863
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | current chi2=0.0014690339426409863 (change=6.52197487537997 %)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | left removable region: 40
[2024-05-16 17:05:12] 2024-05-16 15:04:56,337 | INFO     | model: linear, x: [1715862566.0, 1715862627.0, 1715862688.0, 1715862749.0, 1715862810.0, 1715862871.0, 1715862932.0, 1715862993.0, 1715863054.0, 1715863115.0, 1715
[2024-05-16 17:05:12] 2024-05-16 15:04:56,338 | INFO     | sum of square deviations: 984941258.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,338 | INFO     | sum of deviations: 1134837472.999999
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | mean x: 1715867019.0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | mean y: 2341186.0816326533
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | -- intersect: -1974660158.9528968
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | intersect: -1974660158.9528968
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | chi2: 2.9807794121938327e-05
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | -- intersect: -1974660158.9528968
[2024-05-16 17:05:12] 2024-05-16 15:04:56,339 | INFO     | current memory leak: 1.15 B/s (using 147 data points, chi2=0.00)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | ..............................
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . Timing measurements:
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . get job = 0 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . initial setup = 1 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . payload setup = 6 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . stage-in = 0 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . payload execution = 11762 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . stage-out = 0 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | . log creation = 0 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,340 | INFO     | ..............................
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | 
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | job summary report
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | --------------------------------------------------
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | PanDA job id: 6205932527
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | task id: 38776125
[2024-05-16 17:05:12] 2024-05-16 15:04:56,405 | INFO     | errors: (none)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | pilot state: finished 
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | transexitcode: 0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | exeerrorcode: 0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | exeerrordiag: 
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | exitcode: 0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | exitmsg: OK
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | cpuconsumptiontime: 44324 s
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | nevents: 400
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | neventsw: 0
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | pid: 1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | pgrp: 1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | corecount: 4
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | event service: False
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | sizes: {0: 2392032, 1: 2392231, 6: 2392437, 12: 2392465, 11772: 2421737, 11774: 2430719, 11778: 2430903, 11782: 2431073}
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | --------------------------------------------------
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | 
[2024-05-16 17:05:12] 2024-05-16 15:04:56,406 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,432 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | job 6205932527 has completed (purged errors)
[2024-05-16 17:05:12] 2024-05-16 15:04:56,433 | INFO     | overall cleanup function is called
[2024-05-16 17:05:12] 2024-05-16 15:04:56,525 | INFO     | 11799s have passed since pilot start
[2024-05-16 17:05:12] 2024-05-16 15:04:57,440 | INFO     | --- collectZombieJob: --- 10, [1467743]
[2024-05-16 17:05:12] 2024-05-16 15:04:57,440 | INFO     | zombie collector waiting for pid 1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:57,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:05:12] 2024-05-16 15:04:58,446 | INFO     | collected zombie processes
[2024-05-16 17:05:12] 2024-05-16 15:04:58,446 | INFO     | will now attempt to kill all subprocesses of pid=1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:58,716 | INFO     | process IDs to be killed: [1467743] (in reverse order)
[2024-05-16 17:05:12] 2024-05-16 15:04:58,921 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:05:12] 2024-05-16 15:04:58,921 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:05:12] 2024-05-16 15:04:58,936 | INFO     | did not find any defunct processes belonging to 1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:58,945 | INFO     | did not find any defunct processes belonging to 1467743
[2024-05-16 17:05:12] 2024-05-16 15:04:58,946 | INFO     | ready for new job
[2024-05-16 17:05:12] 2024-05-16 15:04:58,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:05:12] 2024-05-16 15:04:58,947 | INFO     | *************************************
[2024-05-16 17:05:12] 2024-05-16 15:04:58,947 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:05:12] 2024-05-16 15:04:58,947 | INFO     | *************************************
[2024-05-16 17:05:12] 2024-05-16 15:04:58,947 | INFO     | 
[2024-05-16 17:05:12] 2024-05-16 15:04:58,952 | INFO     | architecture information:
[2024-05-16 17:05:12] 2024-05-16 15:04:58,953 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:05:12] 2024-05-16 15:04:58,969 | INFO     | cat /etc/os-release:
[2024-05-16 17:05:12] NAME="CentOS Linux"
[2024-05-16 17:05:12] VERSION="7 (Core)"
[2024-05-16 17:05:12] ID="centos"
[2024-05-16 17:05:12] ID_LIKE="rhel fedora"
[2024-05-16 17:05:12] VERSION_ID="7"
[2024-05-16 17:05:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:05:12] ANSI_COLOR="0;31"
[2024-05-16 17:05:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:05:12] HOME_URL="https://www.centos.org/"
[2024-05-16 17:05:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:05:12] 
[2024-05-16 17:05:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:05:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:05:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:05:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:05:12] 
[2024-05-16 17:05:12] 2024-05-16 15:04:58,969 | INFO     | *************************************
[2024-05-16 17:05:12] 2024-05-16 15:04:59,472 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-16 17:05:12] 2024-05-16 15:04:59,490 | INFO     | sufficient remaining disk space (2974053040128 B)
[2024-05-16 17:05:12] 2024-05-16 15:04:59,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:05:12] 2024-05-16 15:04:59,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:05:12] 2024-05-16 15:04:59,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:05:12] 2024-05-16 15:04:59,491 | INFO     | aborting loop
[2024-05-16 17:05:12] 2024-05-16 15:04:59,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:05:12] 2024-05-16 15:04:59,535 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:05:12] 2024-05-16 15:04:59,535 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:05:12] 2024-05-16 15:04:59,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:05:12] 2024-05-16 15:04:59,829 | INFO     | all job control threads have been joined
[2024-05-16 17:05:12] 2024-05-16 15:05:00,469 | INFO     | all payload control threads have been joined
[2024-05-16 17:05:12] 2024-05-16 15:05:00,496 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:00,497 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:00,520 | INFO     | all data control threads have been joined
[2024-05-16 17:05:12] 2024-05-16 15:05:00,618 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:00,673 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:00,745 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:00,835 | INFO     | [job] control thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,033 | INFO     | [job] validate thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,226 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:05:12] 2024-05-16 15:05:01,428 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,474 | INFO     | [payload] control thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,497 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,525 | INFO     | [data] control thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,720 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:01,887 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:02,200 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:05:12] 2024-05-16 15:05:02,420 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:06,206 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:05:12] 2024-05-16 15:05:06,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47221751288896)>', '<ExcThread(monitor, started 47221928843008)>']
[2024-05-16 17:05:12] 2024-05-16 15:05:07,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:05:12] 2024-05-16 15:05:07,575 | INFO     | [monitor] control thread has ended
[2024-05-16 17:05:12] 2024-05-16 15:05:11,876 | INFO     | all workflow threads have been joined
[2024-05-16 17:05:12] 2024-05-16 15:05:11,876 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:05:12] 2024-05-16 15:05:11,877 | INFO     | traces error code: 0
[2024-05-16 17:05:12] 2024-05-16 15:05:11,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:05:12] 2024-05-16 15:05:12,010 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:05:12] 2024-05-16 15:05:12,032 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:05:12] 2024-05-16 15:05:12,052 [wrapper] pilotpid: 1460140
[2024-05-16 17:05:12] 2024-05-16 15:05:12,067 [wrapper] Pilot exit status: 0
[2024-05-16 17:05:12] 2024-05-16 15:05:12,101 [wrapper] pandaids: 6205932527
[2024-05-16 17:05:12] 2024-05-16 15:05:12,205 [wrapper] cleanup: SIGTERM to supervisor_pilot 2519717 1460141
[2024-05-16 17:05:12] 2024-05-16 15:05:12,207 [wrapper] Test setup, not cleaning
[2024-05-16 17:05:12] 2024-05-16 15:05:12,211 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:05:12] 2024-05-16 15:05:12,213 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:05:12] 2024-05-16 15:05:12,219 [wrapper] apfmon messages muted
[2024-05-16 17:05:12]  *** Error codes and diagnostics ***
[2024-05-16 17:05:12]     "exeErrorCode": 0,
[2024-05-16 17:05:12]     "exeErrorDiag": "",
[2024-05-16 17:05:12]     "pilotErrorCode": 0,
[2024-05-16 17:05:12]     "pilotErrorDiag": "",
[2024-05-16 17:05:12]  *** Listing of results directory ***
[2024-05-16 17:05:12] total 837316
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc    467845 May 14 00:54 pilot3.tar.gz
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc      5633 May 14 01:11 queuedata.json
[2024-05-16 17:05:12] -rwx------ 1 boinc boinc     32251 May 14 01:14 runpilot2-wrapper.sh
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc       100 May 16 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:05:12] -rwxr-xr-x 1 boinc boinc      7986 May 16 13:47 run_atlas
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc       105 May 16 13:47 job.xml
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc      6643 May 16 13:48 init_data.xml
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc 600856332 May 16 13:48 EVNT.38776119._000303.pool.root.1
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc     17537 May 16 13:48 start_atlas.sh
[2024-05-16 17:05:12] drwxrwx--x 2 boinc boinc      4096 May 16 13:48 shared
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc    480011 May 16 13:48 input.tar.gz
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc         0 May 16 13:48 boinc_lockfile
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc      2632 May 16 13:48 pandaJob.out
[2024-05-16 17:05:12] -rw------- 1 boinc boinc       424 May 16 13:48 setup.sh.local
[2024-05-16 17:05:12] -rw------- 1 boinc boinc   1010319 May 16 13:48 agis_schedconf.cvmfs.json
[2024-05-16 17:05:12] -rw------- 1 boinc boinc   1324701 May 16 13:48 cric_ddmendpoints.json
[2024-05-16 17:05:12] drwx------ 4 boinc boinc      4096 May 16 13:48 pilot3
[2024-05-16 17:05:12] -rw------- 1 boinc boinc 249972965 May 16 17:04 HITS.38776125._007661.pool.root.1
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc       532 May 16 17:04 boinc_task_state.xml
[2024-05-16 17:05:12] -rw------- 1 boinc boinc      1037 May 16 17:04 memory_monitor_summary.json
[2024-05-16 17:05:12] -rw------- 1 boinc boinc         0 May 16 17:04 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:05:12] -rw------- 1 boinc boinc    305688 May 16 17:04 log.38776125._007661.job.log.tgz.1
[2024-05-16 17:05:12] -rw------- 1 boinc boinc        95 May 16 17:04 pilot_heartbeat.json
[2024-05-16 17:05:12] -rw------- 1 boinc boinc      7711 May 16 17:04 heartbeat.json
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc      8192 May 16 17:04 boinc_mmap_file
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc        28 May 16 17:04 wrapper_checkpoint.txt
[2024-05-16 17:05:12] -rw------- 1 boinc boinc      4222 May 16 17:05 pilotlog.txt
[2024-05-16 17:05:12] -rw------- 1 boinc boinc   1223707 May 16 17:05 log.38776125._007661.job.log.1
[2024-05-16 17:05:12] -rw------- 1 boinc boinc       357 May 16 17:05 output.list
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc       620 May 16 17:05 runtime_log
[2024-05-16 17:05:12] -rw------- 1 boinc boinc   1546240 May 16 17:05 result.tar.gz
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc     11410 May 16 17:05 runtime_log.err
[2024-05-16 17:05:12] -rw------- 1 boinc boinc       657 May 16 17:05 joNMDmy2tQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmLdLKDm8dvvNm.diag
[2024-05-16 17:05:12] -rw-r--r-- 1 boinc boinc     21323 May 16 17:05 stderr.txt
[2024-05-16 17:05:12] HITS file was successfully produced:
[2024-05-16 17:05:12] -rw------- 1 boinc boinc 249972965 May 16 17:04 shared/HITS.pool.root.1
[2024-05-16 17:05:12]  *** Contents of shared directory: ***
[2024-05-16 17:05:12] total 832904
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc 600856332 May 16 13:48 ATLAS.root_0
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc     17537 May 16 13:48 start_atlas.sh
[2024-05-16 17:05:12] -rw-r--r-- 2 boinc boinc    480011 May 16 13:48 input.tar.gz
[2024-05-16 17:05:12] -rw------- 1 boinc boinc 249972965 May 16 17:04 HITS.pool.root.1
[2024-05-16 17:05:12] -rw------- 1 boinc boinc   1546240 May 16 17:05 result.tar.gz
17:05:13 (1455480): run_atlas exited; CPU time 44038.528818
17:05:13 (1455480): called boinc_finish(0)

</stderr_txt>
]]>

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