Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:42:12 (1968048): wrapper (7.7.26015): starting
08:42:12 (1968048): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 08:42:12] Arguments: --nthreads 4
[2024-05-20 08:42:12] Threads: 4
[2024-05-20 08:42:12] Checking for CVMFS
[2024-05-20 08:42:12] No cvmfs_config command found, will try listing directly
[2024-05-20 08:42:12] CVMFS is ok
[2024-05-20 08:42:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 08:42:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 08:42:12] Further information can be found at the LHC@home message board.
[2024-05-20 08:42:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 08:42:12] Checking for apptainer binary...
[2024-05-20 08:42:12] which: no apptainer in ((null))
[2024-05-20 08:42:12] apptainer is not installed, using version from CVMFS
[2024-05-20 08:42:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 08:42:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-20 08:42:13] apptainer works
[2024-05-20 08:42:13] Set ATHENA_PROC_NUMBER=4
[2024-05-20 08:42:13] Set ATHENA_CORE_NUMBER=4
[2024-05-20 08:42:13] Starting ATLAS job with PandaID=6205931213
[2024-05-20 08:42:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 11:22:04]  *** The last 200 lines of the pilot log: ***
[2024-05-20 11:22:04] 2024-05-20 09:21:41,821 | INFO     | fitting pss+swap vs Time
[2024-05-20 11:22:04] 2024-05-20 09:21:41,821 | INFO     | model: linear, x: [1716187365.0, 1716187426.0, 1716187487.0, 1716187548.0, 1716187609.0, 1716187670.0, 1716187731.0, 1716187792.0, 1716187853.0, 1716187914.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,821 | INFO     | sum of square deviations: 1199940638.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,822 | INFO     | sum of deviations: 52754374288.00001
[2024-05-20 11:22:04] 2024-05-20 09:21:41,822 | INFO     | mean x: 1716192123.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,822 | INFO     | mean y: 2247010.993630573
[2024-05-20 11:22:04] 2024-05-20 09:21:41,822 | INFO     | -- intersect: -75448686759.99791
[2024-05-20 11:22:04] 2024-05-20 09:21:41,822 | INFO     | intersect: -75448686759.99791
[2024-05-20 11:22:04] 2024-05-20 09:21:41,823 | INFO     | chi2: 4.605649872056757
[2024-05-20 11:22:04] 2024-05-20 09:21:41,823 | INFO     | model: linear, x: [1716187365.0, 1716187426.0, 1716187487.0, 1716187548.0, 1716187609.0, 1716187670.0, 1716187731.0, 1716187792.0, 1716187853.0, 1716187914.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,823 | INFO     | sum of square deviations: 1088905998.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | sum of deviations: 60352883604.49999
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | mean x: 1716191970.5
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | mean y: 2257106.4671052634
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | -- intersect: -95118106293.86746
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | intersect: -95118106293.86746
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | chi2: 3.8674264060144363
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | current chi2=3.8674264060144363 (change=16.028649301399252 %)
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | right removable region: 151
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | model: linear, x: [1716187670.0, 1716187731.0, 1716187792.0, 1716187853.0, 1716187914.0, 1716187975.0, 1716188036.0, 1716188097.0, 1716188158.0, 1716188219.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,824 | INFO     | sum of square deviations: 1088905998.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | sum of deviations: 18137800023.999996
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | mean x: 1716192275.5
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | mean y: 2294370.302631579
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | -- intersect: -28584151432.113186
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | intersect: -28584151432.113186
[2024-05-20 11:22:04] 2024-05-20 09:21:41,825 | INFO     | chi2: 2.214027375278407
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | current chi2=2.214027375278407 (change=51.92801370526928 %)
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | model: linear, x: [1716187975.0, 1716188036.0, 1716188097.0, 1716188158.0, 1716188219.0, 1716188280.0, 1716188341.0, 1716188402.0, 1716188463.0, 1716188524.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | sum of square deviations: 984941258.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | sum of deviations: -9101509575.000002
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | mean x: 1716192428.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | mean y: 2334334.7346938774
[2024-05-20 11:22:04] 2024-05-20 09:21:41,826 | INFO     | -- intersect: 15861089046.362888
[2024-05-20 11:22:04] 2024-05-20 09:21:41,827 | INFO     | intersect: 15861089046.362888
[2024-05-20 11:22:04] 2024-05-20 09:21:41,827 | INFO     | chi2: 0.8578414809448852
[2024-05-20 11:22:04] 2024-05-20 09:21:41,827 | INFO     | current chi2=0.8578414809448852 (change=61.25425139167422 %)
[2024-05-20 11:22:04] 2024-05-20 09:21:41,827 | INFO     | model: linear, x: [1716188280.0, 1716188341.0, 1716188402.0, 1716188463.0, 1716188524.0, 1716188585.0, 1716188646.0, 1716188707.0, 1716188768.0, 1716188829.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,827 | INFO     | sum of square deviations: 887813855.5
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | sum of deviations: -12443784243.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | mean x: 1716192580.5
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | mean y: 2339456.23943662
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | -- intersect: 24056852751.880844
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | intersect: 24056852751.880844
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | chi2: 0.7896600780630001
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | current chi2=0.7896600780630001 (change=7.948018881855126 %)
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | left removable region: 30
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | model: linear, x: [1716189195.0, 1716189256.0, 1716189317.0, 1716189378.0, 1716189439.0, 1716189500.0, 1716189561.0, 1716189622.0, 1716189683.0, 1716189744.0, 1716
[2024-05-20 11:22:04] 2024-05-20 09:21:41,828 | INFO     | sum of square deviations: 549294020.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | sum of deviations: 18829846.000000067
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | mean x: 1716192855.0
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | mean y: 2346912.1983471075
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | -- intersect: -56484325.698527224
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | intersect: -56484325.698527224
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | chi2: 0.004600192988908883
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | -- intersect: -56484325.698527224
[2024-05-20 11:22:04] 2024-05-20 09:21:41,829 | INFO     | current memory leak: 0.03 B/s (using 121 data points, chi2=0.00)
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | ..............................
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . Timing measurements:
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . get job = 0 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . initial setup = 1 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . payload setup = 4 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . stage-in = 0 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . payload execution = 9529 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . stage-out = 0 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | . log creation = 0 s
[2024-05-20 11:22:04] 2024-05-20 09:21:41,830 | INFO     | ..............................
[2024-05-20 11:22:04] 2024-05-20 09:21:41,955 | WARNING  | process 1979418 is no longer using CPU - aborting
[2024-05-20 11:22:04] 2024-05-20 09:21:41,956 | INFO     | aborting job monitoring since job object (job id=6205931213) has expired
[2024-05-20 11:22:04] 2024-05-20 09:21:42,196 | INFO     | 
[2024-05-20 11:22:04] 2024-05-20 09:21:42,196 | INFO     | job summary report
[2024-05-20 11:22:04] 2024-05-20 09:21:42,196 | INFO     | --------------------------------------------------
[2024-05-20 11:22:04] 2024-05-20 09:21:42,196 | INFO     | PanDA job id: 6205931213
[2024-05-20 11:22:04] 2024-05-20 09:21:42,196 | INFO     | task id: 38776125
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | errors: (none)
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | pilot state: finished 
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | transexitcode: 0
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | exeerrorcode: 0
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | exeerrordiag: 
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | exitcode: 0
[2024-05-20 11:22:04] 2024-05-20 09:21:42,197 | INFO     | exitmsg: OK
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | cpuconsumptiontime: 35190 s
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | nevents: 400
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | neventsw: 0
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | pid: 1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | pgrp: 1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | corecount: 4
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | event service: False
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | sizes: {0: 2392213, 4: 2392419, 11: 2392447, 9537: 2420892, 9538: 2429929, 9539: 2429929, 9546: 2430227}
[2024-05-20 11:22:04] 2024-05-20 09:21:42,198 | INFO     | --------------------------------------------------
[2024-05-20 11:22:04] 2024-05-20 09:21:42,199 | INFO     | 
[2024-05-20 11:22:04] 2024-05-20 09:21:42,199 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-20 11:22:04] 2024-05-20 09:21:42,229 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,229 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,229 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,229 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | job 6205931213 has completed (purged errors)
[2024-05-20 11:22:04] 2024-05-20 09:21:42,231 | INFO     | overall cleanup function is called
[2024-05-20 11:22:04] 2024-05-20 09:21:43,236 | INFO     | --- collectZombieJob: --- 10, [1979418]
[2024-05-20 11:22:04] 2024-05-20 09:21:43,236 | INFO     | zombie collector waiting for pid 1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:43,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 11:22:04] 2024-05-20 09:21:44,241 | INFO     | collected zombie processes
[2024-05-20 11:22:04] 2024-05-20 09:21:44,241 | INFO     | will now attempt to kill all subprocesses of pid=1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:44,450 | INFO     | process IDs to be killed: [1979418] (in reverse order)
[2024-05-20 11:22:04] 2024-05-20 09:21:44,559 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 11:22:04] 2024-05-20 09:21:44,560 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 11:22:04] 2024-05-20 09:21:44,567 | INFO     | did not find any defunct processes belonging to 1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:44,572 | INFO     | did not find any defunct processes belonging to 1979418
[2024-05-20 11:22:04] 2024-05-20 09:21:44,573 | INFO     | ready for new job
[2024-05-20 11:22:04] 2024-05-20 09:21:44,573 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 11:22:04] 2024-05-20 09:21:44,574 | INFO     | *************************************
[2024-05-20 11:22:04] 2024-05-20 09:21:44,574 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 11:22:04] 2024-05-20 09:21:44,574 | INFO     | *************************************
[2024-05-20 11:22:04] 2024-05-20 09:21:44,574 | INFO     | 
[2024-05-20 11:22:04] 2024-05-20 09:21:44,577 | INFO     | architecture information:
[2024-05-20 11:22:04] 2024-05-20 09:21:44,577 | INFO     | executing command: cat /etc/os-release
[2024-05-20 11:22:04] 2024-05-20 09:21:44,591 | INFO     | cat /etc/os-release:
[2024-05-20 11:22:04] NAME="CentOS Linux"
[2024-05-20 11:22:04] VERSION="7 (Core)"
[2024-05-20 11:22:04] ID="centos"
[2024-05-20 11:22:04] ID_LIKE="rhel fedora"
[2024-05-20 11:22:04] VERSION_ID="7"
[2024-05-20 11:22:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 11:22:04] ANSI_COLOR="0;31"
[2024-05-20 11:22:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 11:22:04] HOME_URL="https://www.centos.org/"
[2024-05-20 11:22:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 11:22:04] 
[2024-05-20 11:22:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 11:22:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 11:22:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 11:22:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 11:22:04] 
[2024-05-20 11:22:04] 2024-05-20 09:21:44,591 | INFO     | *************************************
[2024-05-20 11:22:04] 2024-05-20 09:21:45,094 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-20 11:22:04] 2024-05-20 09:21:45,120 | INFO     | sufficient remaining disk space (592401399808 B)
[2024-05-20 11:22:04] 2024-05-20 09:21:45,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 11:22:04] 2024-05-20 09:21:45,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 11:22:04] 2024-05-20 09:21:45,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 11:22:04] 2024-05-20 09:21:45,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:22:04] 2024-05-20 09:21:45,464 | INFO     | aborting loop
[2024-05-20 11:22:04] 2024-05-20 09:21:45,535 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 11:22:04] 2024-05-20 09:21:45,591 | INFO     | all data control threads have been joined
[2024-05-20 11:22:04] 2024-05-20 09:21:45,603 | INFO     | all job control threads have been joined
[2024-05-20 11:22:04] 2024-05-20 09:21:45,655 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 11:22:04] 2024-05-20 09:21:45,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 11:22:04] 2024-05-20 09:21:45,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 11:22:04] 2024-05-20 09:21:46,127 | INFO     | [job] retrieve thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,393 | INFO     | [payload] failed_post thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,467 | INFO     | all payload control threads have been joined
[2024-05-20 11:22:04] 2024-05-20 09:21:46,470 | INFO     | [job] job monitor thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,489 | INFO     | [job] validate thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,585 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,596 | INFO     | [data] control thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,609 | INFO     | [job] control thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,636 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,794 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:46,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 11:22:04] 2024-05-20 09:21:47,127 | INFO     | [data] copytool_out thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:47,338 | INFO     | [data] copytool_in thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:47,435 | INFO     | [payload] validate_post thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:47,472 | INFO     | [payload] control thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:47,904 | INFO     | [job] queue monitor thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:49,541 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:55,782 | INFO     | job.realtimelogging is not enabled
[2024-05-20 11:22:04] 2024-05-20 09:21:56,788 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 11:22:04] 2024-05-20 09:21:58,377 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47076133463104)>', '<ExcThread(monitor, started 47076308915968)>']
[2024-05-20 11:22:04] 2024-05-20 09:21:58,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 11:22:04] 2024-05-20 09:21:58,708 | INFO     | [monitor] control thread has ended
[2024-05-20 11:22:04] 2024-05-20 09:22:03,403 | INFO     | all workflow threads have been joined
[2024-05-20 11:22:04] 2024-05-20 09:22:03,403 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 11:22:04] 2024-05-20 09:22:03,404 | INFO     | traces error code: 0
[2024-05-20 11:22:04] 2024-05-20 09:22:03,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 11:22:04] 2024-05-20 09:22:03,505 [wrapper] ==== pilot stdout END ====
[2024-05-20 11:22:04] 2024-05-20 09:22:03,509 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 11:22:04] 2024-05-20 09:22:03,513 [wrapper] pilotpid: 1972362
[2024-05-20 11:22:04] 2024-05-20 09:22:03,516 [wrapper] Pilot exit status: 0
[2024-05-20 11:22:04] 2024-05-20 09:22:03,527 [wrapper] pandaids: 6205931213
[2024-05-20 11:22:04] 2024-05-20 09:22:03,624 [wrapper] cleanup: SIGTERM to supervisor_pilot 2421812 1972363
[2024-05-20 11:22:04] 2024-05-20 09:22:03,627 [wrapper] Test setup, not cleaning
[2024-05-20 11:22:04] 2024-05-20 09:22:03,630 [wrapper] ==== wrapper stdout END ====
[2024-05-20 11:22:04] 2024-05-20 09:22:03,632 [wrapper] ==== wrapper stderr END ====
[2024-05-20 11:22:04] 2024-05-20 09:22:03,637 [wrapper] apfmon messages muted
[2024-05-20 11:22:04]  *** Error codes and diagnostics ***
[2024-05-20 11:22:04]     "exeErrorCode": 0,
[2024-05-20 11:22:04]     "exeErrorDiag": "",
[2024-05-20 11:22:04]     "pilotErrorCode": 0,
[2024-05-20 11:22:04]     "pilotErrorDiag": "",
[2024-05-20 11:22:04]  *** Listing of results directory ***
[2024-05-20 11:22:04] total 836428
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc      5633 May 14 00:54 queuedata.json
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc    467845 May 14 00:54 pilot3.tar.gz
[2024-05-20 11:22:04] -rwx------ 1 boinc boinc     32251 May 14 00:55 runpilot2-wrapper.sh
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc       100 May 20 08:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 11:22:04] -rwxr-xr-x 1 boinc boinc      7986 May 20 08:42 run_atlas
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc       105 May 20 08:42 job.xml
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc      6663 May 20 08:42 init_data.xml
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc 600720310 May 20 08:42 EVNT.38776119._000292.pool.root.1
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc     17537 May 20 08:42 start_atlas.sh
[2024-05-20 11:22:04] drwxrwx--x 2 boinc boinc      4096 May 20 08:42 shared
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc    480004 May 20 08:42 input.tar.gz
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc         0 May 20 08:42 boinc_lockfile
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc      2641 May 20 08:42 pandaJob.out
[2024-05-20 11:22:04] -rw------- 1 boinc boinc       424 May 20 08:42 setup.sh.local
[2024-05-20 11:22:04] -rw------- 1 boinc boinc   1013883 May 20 08:42 agis_schedconf.cvmfs.json
[2024-05-20 11:22:04] -rw------- 1 boinc boinc         0 May 20 08:42 agis_ddmendpoints.agis.ALL.json
[2024-05-20 11:22:04] -rw------- 1 boinc boinc   1324701 May 20 08:42 cric_ddmendpoints.json
[2024-05-20 11:22:04] drwx------ 4 boinc boinc      4096 May 20 08:42 pilot3
[2024-05-20 11:22:04] -rw------- 1 boinc boinc 249644679 May 20 11:21 HITS.38776125._007470.pool.root.1
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc       530 May 20 11:21 boinc_task_state.xml
[2024-05-20 11:22:04] -rw------- 1 boinc boinc      1049 May 20 11:21 memory_monitor_summary.json
[2024-05-20 11:22:04] -rw------- 1 boinc boinc    295870 May 20 11:21 log.38776125._007470.job.log.tgz.1
[2024-05-20 11:22:04] -rw------- 1 boinc boinc      7760 May 20 11:21 heartbeat.json
[2024-05-20 11:22:04] -rw------- 1 boinc boinc        95 May 20 11:21 pilot_heartbeat.json
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc      8192 May 20 11:21 boinc_mmap_file
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc        27 May 20 11:21 wrapper_checkpoint.txt
[2024-05-20 11:22:04] -rw------- 1 boinc boinc      4293 May 20 11:22 pilotlog.txt
[2024-05-20 11:22:04] -rw------- 1 boinc boinc   1004241 May 20 11:22 log.38776125._007470.job.log.1
[2024-05-20 11:22:04] -rw------- 1 boinc boinc       357 May 20 11:22 output.list
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc       620 May 20 11:22 runtime_log
[2024-05-20 11:22:04] -rw------- 1 boinc boinc   1320960 May 20 11:22 result.tar.gz
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc     11409 May 20 11:22 runtime_log.err
[2024-05-20 11:22:04] -rw------- 1 boinc boinc       655 May 20 11:22 nlZMDmKltQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmeaLKDm21nOWm.diag
[2024-05-20 11:22:04] -rw-r--r-- 1 boinc boinc     21321 May 20 11:22 stderr.txt
[2024-05-20 11:22:04] HITS file was successfully produced:
[2024-05-20 11:22:04] -rw------- 1 boinc boinc 249644679 May 20 11:21 shared/HITS.pool.root.1
[2024-05-20 11:22:04]  *** Contents of shared directory: ***
[2024-05-20 11:22:04] total 832232
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc 600720310 May 20 08:42 ATLAS.root_0
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc     17537 May 20 08:42 start_atlas.sh
[2024-05-20 11:22:04] -rw-r--r-- 2 boinc boinc    480004 May 20 08:42 input.tar.gz
[2024-05-20 11:22:04] -rw------- 1 boinc boinc 249644679 May 20 11:21 HITS.pool.root.1
[2024-05-20 11:22:04] -rw------- 1 boinc boinc   1320960 May 20 11:22 result.tar.gz
11:22:05 (1968048): run_atlas exited; CPU time 34961.548408
11:22:05 (1968048): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN