Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:05:20 (3660321): wrapper (7.7.26015): starting
08:05:20 (3660321): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 08:05:20] Arguments: --nthreads 4
[2024-05-16 08:05:20] Threads: 4
[2024-05-16 08:05:20] Checking for CVMFS
[2024-05-16 08:05:20] No cvmfs_config command found, will try listing directly
[2024-05-16 08:05:20] CVMFS is ok
[2024-05-16 08:05:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 08:05:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 08:05:20] Further information can be found at the LHC@home message board.
[2024-05-16 08:05:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 08:05:20] Checking for apptainer binary...
[2024-05-16 08:05:20] which: no apptainer in ((null))
[2024-05-16 08:05:20] apptainer is not installed, using version from CVMFS
[2024-05-16 08:05:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 08:05:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-16 08:05:21] apptainer works
[2024-05-16 08:05:21] Set ATHENA_PROC_NUMBER=4
[2024-05-16 08:05:21] Set ATHENA_CORE_NUMBER=4
[2024-05-16 08:05:21] Starting ATLAS job with PandaID=6205915307
[2024-05-16 08:05:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 12:21:26]  *** The last 200 lines of the pilot log: ***
[2024-05-16 12:21:26] 2024-05-16 10:21:05,500 | INFO     | chi2: 3.88068861648495
[2024-05-16 12:21:26] 2024-05-16 10:21:05,500 | INFO     | model: linear, x: [1715839565.0, 1715839626.0, 1715839687.0, 1715839748.0, 1715839809.0, 1715839870.0, 1715839931.0, 1715839992.0, 1715840053.0, 1715840114.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,501 | INFO     | sum of square deviations: 4616114457.5
[2024-05-16 12:21:26] 2024-05-16 10:21:05,502 | INFO     | sum of deviations: 112369914963.50002
[2024-05-16 12:21:26] 2024-05-16 10:21:05,502 | INFO     | mean x: 1715847037.5
[2024-05-16 12:21:26] 2024-05-16 10:21:05,502 | INFO     | mean y: 2291159.68699187
[2024-05-16 12:21:26] 2024-05-16 10:21:05,502 | INFO     | -- intersect: -41766514070.21418
[2024-05-16 12:21:26] 2024-05-16 10:21:05,502 | INFO     | intersect: -41766514070.21418
[2024-05-16 12:21:26] 2024-05-16 10:21:05,503 | INFO     | chi2: 3.8805249657570684
[2024-05-16 12:21:26] 2024-05-16 10:21:05,503 | INFO     | current chi2=3.8805249657570684 (change=0.00421705382870229 %)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,503 | INFO     | right removable region: 245
[2024-05-16 12:21:26] 2024-05-16 10:21:05,504 | INFO     | model: linear, x: [1715839870.0, 1715839931.0, 1715839992.0, 1715840053.0, 1715840114.0, 1715840175.0, 1715840236.0, 1715840297.0, 1715840358.0, 1715840419.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,504 | INFO     | sum of square deviations: 4616114457.5
[2024-05-16 12:21:26] 2024-05-16 10:21:05,505 | INFO     | sum of deviations: 57868232672.00001
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | mean x: 1715847342.5
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | mean y: 2322729.9593495936
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | -- intersect: -21507770695.92986
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | intersect: -21507770695.92986
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | chi2: 1.4969307834301953
[2024-05-16 12:21:26] 2024-05-16 10:21:05,506 | INFO     | current chi2=1.4969307834301953 (change=61.426155732482215 %)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,507 | INFO     | model: linear, x: [1715840175.0, 1715840236.0, 1715840297.0, 1715840358.0, 1715840419.0, 1715840480.0, 1715840541.0, 1715840602.0, 1715840663.0, 1715840724.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,507 | INFO     | sum of square deviations: 4340323240.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | sum of deviations: 11858518401.000006
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | mean x: 1715847495.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | mean y: 2348183.734439834
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | -- intersect: -4685645766.865254
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | intersect: -4685645766.865254
[2024-05-16 12:21:26] 2024-05-16 10:21:05,509 | INFO     | chi2: 0.08794622626746877
[2024-05-16 12:21:26] 2024-05-16 10:21:05,510 | INFO     | current chi2=0.08794622626746877 (change=94.12489693972748 %)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,510 | INFO     | model: linear, x: [1715840480.0, 1715840541.0, 1715840602.0, 1715840663.0, 1715840724.0, 1715840785.0, 1715840846.0, 1715840907.0, 1715840968.0, 1715841029.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,510 | INFO     | sum of square deviations: 4075741535.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | sum of deviations: 4204778922.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | mean x: 1715847647.5
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | mean y: 2352544.533898305
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | -- intersect: -1767818591.1024752
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | intersect: -1767818591.1024752
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | chi2: 0.0014198940000158366
[2024-05-16 12:21:26] 2024-05-16 10:21:05,512 | INFO     | current chi2=0.0014198940000158366 (change=98.38549752470612 %)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,513 | INFO     | model: linear, x: [1715840785.0, 1715840846.0, 1715840907.0, 1715840968.0, 1715841029.0, 1715841090.0, 1715841151.0, 1715841212.0, 1715841273.0, 1715841334.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,513 | INFO     | sum of square deviations: 3822136780.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | sum of deviations: 4450804732.000001
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | mean x: 1715847800.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | mean y: 2352394.701298701
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | -- intersect: -1995719350.8189628
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | intersect: -1995719350.8189628
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | chi2: 0.001172764802109727
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | current chi2=0.001172764802109727 (change=17.404763869933486 %)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | left removable region: 40
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | model: linear, x: [1715842005.0, 1715842066.0, 1715842127.0, 1715842188.0, 1715842249.0, 1715842310.0, 1715842371.0, 1715842432.0, 1715842493.0, 1715842554.0, 1715
[2024-05-16 12:21:26] 2024-05-16 10:21:05,514 | INFO     | sum of square deviations: 2671343110.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,515 | INFO     | sum of deviations: 3834851924.999998
[2024-05-16 12:21:26] 2024-05-16 10:21:05,515 | INFO     | mean x: 1715848227.0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,515 | INFO     | mean y: 2352496.717073171
[2024-05-16 12:21:26] 2024-05-16 10:21:05,515 | INFO     | -- intersect: -2460836844.88674
[2024-05-16 12:21:26] 2024-05-16 10:21:05,515 | INFO     | intersect: -2460836844.88674
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | chi2: 0.0005538429529934681
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | -- intersect: -2460836844.88674
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | current memory leak: 1.44 B/s (using 205 data points, chi2=0.00)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | ..............................
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . Timing measurements:
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . get job = 0 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . initial setup = 1 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . payload setup = 8 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . stage-in = 0 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . payload execution = 15295 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . stage-out = 0 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | . log creation = 0 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,516 | INFO     | ..............................
[2024-05-16 12:21:26] 2024-05-16 10:21:05,579 | INFO     | 
[2024-05-16 12:21:26] 2024-05-16 10:21:05,579 | INFO     | job summary report
[2024-05-16 12:21:26] 2024-05-16 10:21:05,579 | INFO     | --------------------------------------------------
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | PanDA job id: 6205915307
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | task id: 38776146
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | errors: (none)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | pilot state: finished 
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | transexitcode: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | exeerrorcode: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | exeerrordiag: 
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | exitcode: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | exitmsg: OK
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | cpuconsumptiontime: 58354 s
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | nevents: 400
[2024-05-16 12:21:26] 2024-05-16 10:21:05,580 | INFO     | neventsw: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | pid: 3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | pgrp: 3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | corecount: 4
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | event service: False
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | sizes: {0: 2391287, 1: 2392222, 7: 2392428, 12: 2392456, 15306: 2423301, 15308: 2432467, 15314: 2432581}
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | --------------------------------------------------
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | 
[2024-05-16 12:21:26] 2024-05-16 10:21:05,581 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/1
[2024-05-16 12:21:26] 2024-05-16 10:21:05,604 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,604 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,604 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,604 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,606 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,606 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,606 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 12:21:26] 2024-05-16 10:21:05,606 | INFO     | job 6205915307 has completed (purged errors)
[2024-05-16 12:21:26] 2024-05-16 10:21:05,606 | INFO     | overall cleanup function is called
[2024-05-16 12:21:26] 2024-05-16 10:21:06,614 | INFO     | --- collectZombieJob: --- 10, [3672616]
[2024-05-16 12:21:26] 2024-05-16 10:21:06,614 | INFO     | zombie collector waiting for pid 3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:06,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 12:21:26] 2024-05-16 10:21:07,619 | INFO     | collected zombie processes
[2024-05-16 12:21:26] 2024-05-16 10:21:07,619 | INFO     | will now attempt to kill all subprocesses of pid=3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:07,851 | INFO     | process IDs to be killed: [3672616] (in reverse order)
[2024-05-16 12:21:26] 2024-05-16 10:21:08,021 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 12:21:26] 2024-05-16 10:21:08,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 12:21:26] 2024-05-16 10:21:08,039 | INFO     | did not find any defunct processes belonging to 3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:08,052 | INFO     | did not find any defunct processes belonging to 3672616
[2024-05-16 12:21:26] 2024-05-16 10:21:08,053 | INFO     | ready for new job
[2024-05-16 12:21:26] 2024-05-16 10:21:08,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 12:21:26] 2024-05-16 10:21:08,055 | INFO     | *************************************
[2024-05-16 12:21:26] 2024-05-16 10:21:08,055 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 12:21:26] 2024-05-16 10:21:08,055 | INFO     | *************************************
[2024-05-16 12:21:26] 2024-05-16 10:21:08,055 | INFO     | 
[2024-05-16 12:21:26] 2024-05-16 10:21:08,062 | INFO     | architecture information:
[2024-05-16 12:21:26] 2024-05-16 10:21:08,062 | INFO     | executing command: cat /etc/os-release
[2024-05-16 12:21:26] 2024-05-16 10:21:08,081 | INFO     | cat /etc/os-release:
[2024-05-16 12:21:26] NAME="CentOS Linux"
[2024-05-16 12:21:26] VERSION="7 (Core)"
[2024-05-16 12:21:26] ID="centos"
[2024-05-16 12:21:26] ID_LIKE="rhel fedora"
[2024-05-16 12:21:26] VERSION_ID="7"
[2024-05-16 12:21:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 12:21:26] ANSI_COLOR="0;31"
[2024-05-16 12:21:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 12:21:26] HOME_URL="https://www.centos.org/"
[2024-05-16 12:21:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 12:21:26] 
[2024-05-16 12:21:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 12:21:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 12:21:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 12:21:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 12:21:26] 
[2024-05-16 12:21:26] 2024-05-16 10:21:08,081 | INFO     | *************************************
[2024-05-16 12:21:26] 2024-05-16 10:21:08,585 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/1
[2024-05-16 12:21:26] 2024-05-16 10:21:08,607 | INFO     | sufficient remaining disk space (2959270215680 B)
[2024-05-16 12:21:26] 2024-05-16 10:21:08,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 12:21:26] 2024-05-16 10:21:08,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 12:21:26] 2024-05-16 10:21:08,608 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 12:21:26] 2024-05-16 10:21:08,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 12:21:26] 2024-05-16 10:21:08,609 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 12:21:26] 2024-05-16 10:21:08,609 | INFO     | aborting loop
[2024-05-16 12:21:26] 2024-05-16 10:21:08,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 12:21:26] 2024-05-16 10:21:08,610 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 12:21:26] 2024-05-16 10:21:08,759 | INFO     | all data control threads have been joined
[2024-05-16 12:21:26] 2024-05-16 10:21:09,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 12:21:26] 2024-05-16 10:21:09,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 12:21:26] 2024-05-16 10:21:09,611 | INFO     | [job] retrieve thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:09,612 | INFO     | [job] job monitor thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:09,764 | INFO     | [data] control thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:09,859 | INFO     | all payload control threads have been joined
[2024-05-16 12:21:26] 2024-05-16 10:21:09,914 | INFO     | [job] validate thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:09,949 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:10,065 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:10,090 | INFO     | [data] copytool_in thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:10,164 | INFO     | all job control threads have been joined
[2024-05-16 12:21:26] 2024-05-16 10:21:10,266 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:10,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 12:21:26] 2024-05-16 10:21:10,864 | INFO     | [payload] control thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:10,974 | INFO     | [payload] validate_post thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:11,026 | INFO     | [payload] failed_post thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:11,169 | INFO     | [job] control thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:11,435 | INFO     | [data] copytool_out thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:11,594 | INFO     | [job] queue monitor thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:13,498 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:19,258 | INFO     | job.realtimelogging is not enabled
[2024-05-16 12:21:26] 2024-05-16 10:21:20,263 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 12:21:26] 2024-05-16 10:21:20,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46996471309376)>', '<ExcThread(monitor, started 46996644660992)>']
[2024-05-16 12:21:26] 2024-05-16 10:21:21,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 12:21:26] 2024-05-16 10:21:21,674 | INFO     | [monitor] control thread has ended
[2024-05-16 12:21:26] 2024-05-16 10:21:25,903 | INFO     | all workflow threads have been joined
[2024-05-16 12:21:26] 2024-05-16 10:21:25,903 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 12:21:26] 2024-05-16 10:21:25,903 | INFO     | traces error code: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:25,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 12:21:26] 2024-05-16 10:21:25,996 [wrapper] ==== pilot stdout END ====
[2024-05-16 12:21:26] 2024-05-16 10:21:25,999 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 12:21:26] 2024-05-16 10:21:26,001 [wrapper] pilotpid: 3665001
[2024-05-16 12:21:26] 2024-05-16 10:21:26,004 [wrapper] Pilot exit status: 0
[2024-05-16 12:21:26] 2024-05-16 10:21:26,026 [wrapper] pandaids: 6205915307
[2024-05-16 12:21:26] 2024-05-16 10:21:26,149 [wrapper] cleanup: SIGTERM to supervisor_pilot  898651 3665002
[2024-05-16 12:21:26] 2024-05-16 10:21:26,153 [wrapper] Test setup, not cleaning
[2024-05-16 12:21:26] 2024-05-16 10:21:26,155 [wrapper] ==== wrapper stdout END ====
[2024-05-16 12:21:26] 2024-05-16 10:21:26,156 [wrapper] ==== wrapper stderr END ====
[2024-05-16 12:21:26] 2024-05-16 10:21:26,162 [wrapper] apfmon messages muted
[2024-05-16 12:21:26]  *** Error codes and diagnostics ***
[2024-05-16 12:21:26]     "exeErrorCode": 0,
[2024-05-16 12:21:26]     "exeErrorDiag": "",
[2024-05-16 12:21:26]     "pilotErrorCode": 0,
[2024-05-16 12:21:26]     "pilotErrorDiag": "",
[2024-05-16 12:21:26]  *** Listing of results directory ***
[2024-05-16 12:21:26] total 863804
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc    467845 May 13 22:54 pilot3.tar.gz
[2024-05-16 12:21:26] -rwx------ 1 boinc boinc     32251 May 13 23:22 runpilot2-wrapper.sh
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc      5633 May 13 23:22 queuedata.json
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc       100 May 16 08:05 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 12:21:26] -rwxr-xr-x 1 boinc boinc      7986 May 16 08:05 run_atlas
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc       105 May 16 08:05 job.xml
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc 610075645 May 16 08:05 EVNT.38776140._000377.pool.root.1
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc     17537 May 16 08:05 start_atlas.sh
[2024-05-16 12:21:26] drwxrwx--x 2 boinc boinc      4096 May 16 08:05 shared
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc    479992 May 16 08:05 input.tar.gz
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc      6642 May 16 08:05 init_data.xml
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc         0 May 16 08:05 boinc_lockfile
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc      2622 May 16 08:05 pandaJob.out
[2024-05-16 12:21:26] -rw------- 1 boinc boinc       424 May 16 08:05 setup.sh.local
[2024-05-16 12:21:26] -rw------- 1 boinc boinc   1010627 May 16 08:05 agis_schedconf.cvmfs.json
[2024-05-16 12:21:26] -rw------- 1 boinc boinc   1324701 May 16 08:05 cric_ddmendpoints.json
[2024-05-16 12:21:26] drwx------ 4 boinc boinc      4096 May 16 08:05 pilot3
[2024-05-16 12:21:26] -rw------- 1 boinc boinc 266979342 May 16 12:20 HITS.38776146._009428.pool.root.1
[2024-05-16 12:21:26] -rw------- 1 boinc boinc        95 May 16 12:20 pilot_heartbeat.json
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc       531 May 16 12:20 boinc_task_state.xml
[2024-05-16 12:21:26] -rw------- 1 boinc boinc      1057 May 16 12:20 memory_monitor_summary.json
[2024-05-16 12:21:26] -rw------- 1 boinc boinc         0 May 16 12:20 agis_ddmendpoints.agis.ALL.json
[2024-05-16 12:21:26] -rw------- 1 boinc boinc    351782 May 16 12:20 log.38776146._009428.job.log.tgz.1
[2024-05-16 12:21:26] -rw------- 1 boinc boinc      7724 May 16 12:21 heartbeat.json
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc        28 May 16 12:21 wrapper_checkpoint.txt
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc      8192 May 16 12:21 boinc_mmap_file
[2024-05-16 12:21:26] -rw------- 1 boinc boinc      4417 May 16 12:21 pilotlog.txt
[2024-05-16 12:21:26] -rw------- 1 boinc boinc   1623954 May 16 12:21 log.38776146._009428.job.log.1
[2024-05-16 12:21:26] -rw------- 1 boinc boinc       357 May 16 12:21 output.list
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc       620 May 16 12:21 runtime_log
[2024-05-16 12:21:26] -rw------- 1 boinc boinc   1996800 May 16 12:21 result.tar.gz
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc     11410 May 16 12:21 runtime_log.err
[2024-05-16 12:21:26] -rw------- 1 boinc boinc       659 May 16 12:21 lgaNDmWJsQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmoVHKDmyDN6Zm.diag
[2024-05-16 12:21:26] -rw-r--r-- 1 boinc boinc     21358 May 16 12:21 stderr.txt
[2024-05-16 12:21:26] HITS file was successfully produced:
[2024-05-16 12:21:26] -rw------- 1 boinc boinc 266979342 May 16 12:20 shared/HITS.pool.root.1
[2024-05-16 12:21:26]  *** Contents of shared directory: ***
[2024-05-16 12:21:26] total 858956
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc 610075645 May 16 08:05 ATLAS.root_0
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc     17537 May 16 08:05 start_atlas.sh
[2024-05-16 12:21:26] -rw-r--r-- 2 boinc boinc    479992 May 16 08:05 input.tar.gz
[2024-05-16 12:21:26] -rw------- 1 boinc boinc 266979342 May 16 12:20 HITS.pool.root.1
[2024-05-16 12:21:26] -rw------- 1 boinc boinc   1996800 May 16 12:21 result.tar.gz
12:21:28 (3660321): run_atlas exited; CPU time 57953.296652
12:21:28 (3660321): called boinc_finish(0)

</stderr_txt>
]]>

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