Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:03:08 (2712029): wrapper (7.7.26015): starting
15:03:08 (2712029): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 15:03:08] Arguments: --nthreads 4
[2024-05-17 15:03:08] Threads: 4
[2024-05-17 15:03:08] Checking for CVMFS
[2024-05-17 15:03:08] No cvmfs_config command found, will try listing directly
[2024-05-17 15:03:08] CVMFS is ok
[2024-05-17 15:03:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 15:03:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 15:03:08] Further information can be found at the LHC@home message board.
[2024-05-17 15:03:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 15:03:08] Checking for apptainer binary...
[2024-05-17 15:03:08] which: no apptainer in ((null))
[2024-05-17 15:03:08] apptainer is not installed, using version from CVMFS
[2024-05-17 15:03:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 15:03:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-17 15:03:09] apptainer works
[2024-05-17 15:03:09] Set ATHENA_PROC_NUMBER=4
[2024-05-17 15:03:09] Set ATHENA_CORE_NUMBER=4
[2024-05-17 15:03:09] Starting ATLAS job with PandaID=6205915171
[2024-05-17 15:03:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 18:00:58]  *** The last 200 lines of the pilot log: ***
[2024-05-17 18:00:58] 2024-05-17 16:00:43,682 | INFO     | intersect: -6560634077.106912
[2024-05-17 18:00:58] 2024-05-17 16:00:43,682 | INFO     | chi2: 0.0015020295757365845
[2024-05-17 18:00:58] 2024-05-17 16:00:43,682 | INFO     | current chi2=0.0015020295757365845 (change=96.56112619319542 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,683 | INFO     | model: linear, x: [1715952252.0, 1715952313.0, 1715952374.0, 1715952435.0, 1715952496.0, 1715952557.0, 1715952618.0, 1715952679.0, 1715952740.0, 1715952801.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,683 | INFO     | sum of square deviations: 1132458442.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | sum of deviations: 3660957974.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | mean x: 1715956918.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | mean y: 2346409.383116883
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | -- intersect: -5544917780.561779
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | intersect: -5544917780.561779
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | chi2: 0.0006801668053288525
[2024-05-17 18:00:58] 2024-05-17 16:00:43,684 | INFO     | current chi2=0.0006801668053288525 (change=54.71681674474994 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,685 | INFO     | model: linear, x: [1715952557.0, 1715952618.0, 1715952679.0, 1715952740.0, 1715952801.0, 1715952862.0, 1715952923.0, 1715952984.0, 1715953045.0, 1715953106.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,685 | INFO     | sum of square deviations: 1025693650.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | sum of deviations: 2901820020.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | mean x: 1715957071.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | mean y: 2347490.986577181
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | -- intersect: -4852317039.780832
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | intersect: -4852317039.780832
[2024-05-17 18:00:58] 2024-05-17 16:00:43,686 | INFO     | chi2: 0.00033237985099934374
[2024-05-17 18:00:58] 2024-05-17 16:00:43,687 | INFO     | current chi2=0.00033237985099934374 (change=51.13259741650549 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,687 | INFO     | model: linear, x: [1715952862.0, 1715952923.0, 1715952984.0, 1715953045.0, 1715953106.0, 1715953167.0, 1715953228.0, 1715953289.0, 1715953350.0, 1715953411.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,687 | INFO     | sum of square deviations: 925859220.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | sum of deviations: 2367690874.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | mean x: 1715957223.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | mean y: 2348306.4791666665
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | -- intersect: -4385852589.887461
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | intersect: -4385852589.887461
[2024-05-17 18:00:58] 2024-05-17 16:00:43,688 | INFO     | chi2: 0.00020314246185213928
[2024-05-17 18:00:58] 2024-05-17 16:00:43,689 | INFO     | current chi2=0.00020314246185213928 (change=38.88243789707326 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,689 | INFO     | model: linear, x: [1715953167.0, 1715953228.0, 1715953289.0, 1715953350.0, 1715953411.0, 1715953472.0, 1715953533.0, 1715953594.0, 1715953655.0, 1715953716.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,689 | INFO     | sum of square deviations: 832722590.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | sum of deviations: 1912074158.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | mean x: 1715957376.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | mean y: 2349051.654676259
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | -- intersect: -3937783946.15326
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | intersect: -3937783946.15326
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | chi2: 9.790801279956734e-05
[2024-05-17 18:00:58] 2024-05-17 16:00:43,690 | INFO     | current chi2=9.790801279956734e-05 (change=51.80327544182695 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,691 | INFO     | model: linear, x: [1715953472.0, 1715953533.0, 1715953594.0, 1715953655.0, 1715953716.0, 1715953777.0, 1715953838.0, 1715953899.0, 1715953960.0, 1715954021.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,691 | INFO     | sum of square deviations: 746051197.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | sum of deviations: 1638088082.9999993
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | mean x: 1715957528.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | mean y: 2349532.0447761193
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | -- intersect: -3765340390.294611
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | intersect: -3765340390.294611
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | chi2: 7.688205293420375e-05
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | current chi2=7.688205293420375e-05 (change=21.475218691658 %)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,692 | INFO     | left removable region: 80
[2024-05-17 18:00:58] 2024-05-17 16:00:43,693 | INFO     | model: linear, x: [1715955912.0, 1715955973.0, 1715956034.0, 1715956095.0, 1715956156.0, 1715956217.0, 1715956278.0, 1715956339.0, 1715956400.0, 1715956461.0, 1715
[2024-05-17 18:00:58] 2024-05-17 16:00:43,693 | INFO     | sum of square deviations: 211285822.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,693 | INFO     | sum of deviations: 329049738.0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | mean x: 1715958565.5
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | mean y: 2352157.6818181816
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | -- intersect: -2670026476.397239
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | intersect: -2670026476.397239
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | chi2: 4.7390242469577665e-05
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | -- intersect: -2670026476.397239
[2024-05-17 18:00:58] 2024-05-17 16:00:43,694 | INFO     | current memory leak: 1.56 B/s (using 88 data points, chi2=0.00)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | ..............................
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . Timing measurements:
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . get job = 0 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . initial setup = 0 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . payload setup = 7 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . stage-in = 0 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . payload execution = 10606 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . stage-out = 0 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | . log creation = 0 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,695 | INFO     | ..............................
[2024-05-17 18:00:58] 2024-05-17 16:00:43,787 | INFO     | 
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | job summary report
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | --------------------------------------------------
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | PanDA job id: 6205915171
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | task id: 38776146
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | errors: (none)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | pilot state: finished 
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | transexitcode: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | exeerrorcode: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,788 | INFO     | exeerrordiag: 
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | exitcode: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | exitmsg: OK
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | cpuconsumptiontime: 39629 s
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | nevents: 400
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | neventsw: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | pid: 2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | pgrp: 2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | corecount: 4
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | event service: False
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | sizes: {0: 2391280, 1: 2392215, 6: 2392421, 12: 2392449, 10617: 2421424, 10618: 2430591, 10619: 2430591, 10625: 2430761}
[2024-05-17 18:00:58] 2024-05-17 16:00:43,789 | INFO     | --------------------------------------------------
[2024-05-17 18:00:58] 2024-05-17 16:00:43,790 | INFO     | 
[2024-05-17 18:00:58] 2024-05-17 16:00:43,790 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-17 18:00:58] 2024-05-17 16:00:43,810 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,810 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,810 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,810 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | job 6205915171 has completed (purged errors)
[2024-05-17 18:00:58] 2024-05-17 16:00:43,812 | INFO     | overall cleanup function is called
[2024-05-17 18:00:58] 2024-05-17 16:00:44,820 | INFO     | --- collectZombieJob: --- 10, [2725118]
[2024-05-17 18:00:58] 2024-05-17 16:00:44,820 | INFO     | zombie collector waiting for pid 2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:44,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 18:00:58] 2024-05-17 16:00:45,825 | INFO     | collected zombie processes
[2024-05-17 18:00:58] 2024-05-17 16:00:45,825 | INFO     | will now attempt to kill all subprocesses of pid=2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:46,005 | INFO     | process IDs to be killed: [2725118] (in reverse order)
[2024-05-17 18:00:58] 2024-05-17 16:00:46,122 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 18:00:58] 2024-05-17 16:00:46,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 18:00:58] 2024-05-17 16:00:46,136 | INFO     | did not find any defunct processes belonging to 2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:46,147 | INFO     | did not find any defunct processes belonging to 2725118
[2024-05-17 18:00:58] 2024-05-17 16:00:46,147 | INFO     | ready for new job
[2024-05-17 18:00:58] 2024-05-17 16:00:46,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 18:00:58] 2024-05-17 16:00:46,148 | INFO     | *************************************
[2024-05-17 18:00:58] 2024-05-17 16:00:46,148 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 18:00:58] 2024-05-17 16:00:46,148 | INFO     | *************************************
[2024-05-17 18:00:58] 2024-05-17 16:00:46,148 | INFO     | 
[2024-05-17 18:00:58] 2024-05-17 16:00:46,153 | INFO     | architecture information:
[2024-05-17 18:00:58] 2024-05-17 16:00:46,154 | INFO     | executing command: cat /etc/os-release
[2024-05-17 18:00:58] 2024-05-17 16:00:46,164 | INFO     | cat /etc/os-release:
[2024-05-17 18:00:58] NAME="CentOS Linux"
[2024-05-17 18:00:58] VERSION="7 (Core)"
[2024-05-17 18:00:58] ID="centos"
[2024-05-17 18:00:58] ID_LIKE="rhel fedora"
[2024-05-17 18:00:58] VERSION_ID="7"
[2024-05-17 18:00:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 18:00:58] ANSI_COLOR="0;31"
[2024-05-17 18:00:58] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 18:00:58] HOME_URL="https://www.centos.org/"
[2024-05-17 18:00:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 18:00:58] 
[2024-05-17 18:00:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 18:00:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 18:00:58] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 18:00:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 18:00:58] 
[2024-05-17 18:00:58] 2024-05-17 16:00:46,164 | INFO     | *************************************
[2024-05-17 18:00:58] 2024-05-17 16:00:46,665 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | INFO     | sufficient remaining disk space (2985990029312 B)
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 18:00:58] 2024-05-17 16:00:46,683 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 18:00:58] 2024-05-17 16:00:46,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 18:00:58] 2024-05-17 16:00:47,017 | INFO     | all data control threads have been joined
[2024-05-17 18:00:58] 2024-05-17 16:00:47,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:00:58] 2024-05-17 16:00:47,306 | INFO     | aborting loop
[2024-05-17 18:00:58] 2024-05-17 16:00:47,673 | INFO     | all payload control threads have been joined
[2024-05-17 18:00:58] 2024-05-17 16:00:47,688 | INFO     | [job] retrieve thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:47,774 | INFO     | all job control threads have been joined
[2024-05-17 18:00:58] 2024-05-17 16:00:47,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 18:00:58] 2024-05-17 16:00:48,023 | INFO     | [data] control thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 18:00:58] 2024-05-17 16:00:48,196 | INFO     | [payload] failed_post thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,311 | INFO     | [job] job monitor thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,355 | INFO     | [data] copytool_in thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,418 | INFO     | [job] validate thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,547 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,678 | INFO     | [payload] control thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,697 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,779 | INFO     | [job] control thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,791 | INFO     | [payload] validate_post thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:48,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 18:00:58] 2024-05-17 16:00:48,881 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:49,023 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:49,798 | INFO     | [job] queue monitor thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:49,864 | INFO     | [data] copytool_out thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:52,198 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 18:00:58] 2024-05-17 16:00:52,206 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47640672130112)>', '<ExcThread(monitor, started 47640847845120)>']
[2024-05-17 18:00:58] 2024-05-17 16:00:52,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 18:00:58] 2024-05-17 16:00:52,713 | INFO     | [monitor] control thread has ended
[2024-05-17 18:00:58] 2024-05-17 16:00:57,231 | INFO     | all workflow threads have been joined
[2024-05-17 18:00:58] 2024-05-17 16:00:57,231 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 18:00:58] 2024-05-17 16:00:57,232 | INFO     | traces error code: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:57,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 18:00:58] 2024-05-17 16:00:57,314 [wrapper] ==== pilot stdout END ====
[2024-05-17 18:00:58] 2024-05-17 16:00:57,316 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 18:00:58] 2024-05-17 16:00:57,318 [wrapper] pilotpid: 2716987
[2024-05-17 18:00:58] 2024-05-17 16:00:57,320 [wrapper] Pilot exit status: 0
[2024-05-17 18:00:58] 2024-05-17 16:00:57,330 [wrapper] pandaids: 6205915171
[2024-05-17 18:00:58] 2024-05-17 16:00:57,420 [wrapper] cleanup: SIGTERM to supervisor_pilot 3477723 2716988
[2024-05-17 18:00:58] 2024-05-17 16:00:57,422 [wrapper] Test setup, not cleaning
[2024-05-17 18:00:58] 2024-05-17 16:00:57,424 [wrapper] ==== wrapper stdout END ====
[2024-05-17 18:00:58] 2024-05-17 16:00:57,426 [wrapper] ==== wrapper stderr END ====
[2024-05-17 18:00:58] 2024-05-17 16:00:57,430 [wrapper] apfmon messages muted
[2024-05-17 18:00:58]  *** Error codes and diagnostics ***
[2024-05-17 18:00:58]     "exeErrorCode": 0,
[2024-05-17 18:00:58]     "exeErrorDiag": "",
[2024-05-17 18:00:58]     "pilotErrorCode": 0,
[2024-05-17 18:00:58]     "pilotErrorDiag": "",
[2024-05-17 18:00:58]  *** Listing of results directory ***
[2024-05-17 18:00:58] total 874208
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc    467845 May 13 22:54 pilot3.tar.gz
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc      5633 May 13 23:09 queuedata.json
[2024-05-17 18:00:58] -rwx------ 1 boinc boinc     32251 May 13 23:11 runpilot2-wrapper.sh
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc       100 May 17 15:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 18:00:58] -rwxr-xr-x 1 boinc boinc      7986 May 17 15:03 run_atlas
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc       105 May 17 15:03 job.xml
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc      6646 May 17 15:03 init_data.xml
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc 615394546 May 17 15:03 EVNT.38776140._000371.pool.root.1
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc     17537 May 17 15:03 start_atlas.sh
[2024-05-17 18:00:58] drwxrwx--x 2 boinc boinc      4096 May 17 15:03 shared
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc    479996 May 17 15:03 input.tar.gz
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc         0 May 17 15:03 boinc_lockfile
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc      2614 May 17 15:03 pandaJob.out
[2024-05-17 18:00:58] -rw------- 1 boinc boinc       424 May 17 15:03 setup.sh.local
[2024-05-17 18:00:58] -rw------- 1 boinc boinc   1019370 May 17 15:03 agis_schedconf.cvmfs.json
[2024-05-17 18:00:58] -rw------- 1 boinc boinc         0 May 17 15:03 agis_ddmendpoints.agis.ALL.json
[2024-05-17 18:00:58] -rw------- 1 boinc boinc   1324701 May 17 15:03 cric_ddmendpoints.json
[2024-05-17 18:00:58] drwx------ 4 boinc boinc      4096 May 17 15:03 pilot3
[2024-05-17 18:00:58] -rw------- 1 boinc boinc        95 May 17 17:59 pilot_heartbeat.json
[2024-05-17 18:00:58] -rw------- 1 boinc boinc 273337585 May 17 18:00 HITS.38776146._009292.pool.root.1
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc       531 May 17 18:00 boinc_task_state.xml
[2024-05-17 18:00:58] -rw------- 1 boinc boinc      1044 May 17 18:00 memory_monitor_summary.json
[2024-05-17 18:00:58] -rw------- 1 boinc boinc    318815 May 17 18:00 log.38776146._009292.job.log.tgz.1
[2024-05-17 18:00:58] -rw------- 1 boinc boinc      7723 May 17 18:00 heartbeat.json
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc      8192 May 17 18:00 boinc_mmap_file
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc        28 May 17 18:00 wrapper_checkpoint.txt
[2024-05-17 18:00:58] -rw------- 1 boinc boinc      4346 May 17 18:00 pilotlog.txt
[2024-05-17 18:00:58] -rw------- 1 boinc boinc   1142328 May 17 18:00 log.38776146._009292.job.log.1
[2024-05-17 18:00:58] -rw------- 1 boinc boinc       357 May 17 18:00 output.list
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc       620 May 17 18:00 runtime_log
[2024-05-17 18:00:58] -rw------- 1 boinc boinc   1484800 May 17 18:00 result.tar.gz
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc     11429 May 17 18:00 runtime_log.err
[2024-05-17 18:00:58] -rw------- 1 boinc boinc       658 May 17 18:00 MtSMDmW8rQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmASLKDmdZjVPn.diag
[2024-05-17 18:00:58] -rw-r--r-- 1 boinc boinc     21404 May 17 18:00 stderr.txt
[2024-05-17 18:00:58] HITS file was successfully produced:
[2024-05-17 18:00:58] -rw------- 1 boinc boinc 273337585 May 17 18:00 shared/HITS.pool.root.1
[2024-05-17 18:00:58]  *** Contents of shared directory: ***
[2024-05-17 18:00:58] total 869856
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc 615394546 May 17 15:03 ATLAS.root_0
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc     17537 May 17 15:03 start_atlas.sh
[2024-05-17 18:00:58] -rw-r--r-- 2 boinc boinc    479996 May 17 15:03 input.tar.gz
[2024-05-17 18:00:58] -rw------- 1 boinc boinc 273337585 May 17 18:00 HITS.pool.root.1
[2024-05-17 18:00:58] -rw------- 1 boinc boinc   1484800 May 17 18:00 result.tar.gz
18:00:59 (2712029): run_atlas exited; CPU time 39349.699203
18:00:59 (2712029): called boinc_finish(0)

</stderr_txt>
]]>

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