Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:11:38 (107942): wrapper (7.7.26015): starting
21:11:38 (107942): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 21:11:38] Arguments: --nthreads 4
[2024-05-17 21:11:38] Threads: 4
[2024-05-17 21:11:38] Checking for CVMFS
[2024-05-17 21:11:38] No cvmfs_config command found, will try listing directly
[2024-05-17 21:11:38] CVMFS is ok
[2024-05-17 21:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 21:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 21:11:38] Further information can be found at the LHC@home message board.
[2024-05-17 21:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 21:11:38] Checking for apptainer binary...
[2024-05-17 21:11:38] which: no apptainer in ((null))
[2024-05-17 21:11:38] apptainer is not installed, using version from CVMFS
[2024-05-17 21:11:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 21:11:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-17 21:11:39] apptainer works
[2024-05-17 21:11:39] Set ATHENA_PROC_NUMBER=4
[2024-05-17 21:11:39] Set ATHENA_CORE_NUMBER=4
[2024-05-17 21:11:39] Starting ATLAS job with PandaID=6205914274
[2024-05-17 21:11:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 23:55:55]  *** The last 200 lines of the pilot log: ***
[2024-05-17 23:55:55] 2024-05-17 21:55:33,600 | INFO     | model: linear, x: [1715973439.0, 1715973500.0, 1715973561.0, 1715973622.0, 1715973683.0, 1715973744.0, 1715973805.0, 1715973866.0, 1715973927.0, 1715973988.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,600 | INFO     | sum of square deviations: 1177156955.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,601 | INFO     | sum of deviations: 34356766205.500004
[2024-05-17 23:55:55] 2024-05-17 21:55:33,601 | INFO     | mean x: 1715978166.5
[2024-05-17 23:55:55] 2024-05-17 21:55:33,601 | INFO     | mean y: 2313912.5705128205
[2024-05-17 23:55:55] 2024-05-17 21:55:33,601 | INFO     | -- intersect: -50080608700.05854
[2024-05-17 23:55:55] 2024-05-17 21:55:33,601 | INFO     | intersect: -50080608700.05854
[2024-05-17 23:55:55] 2024-05-17 21:55:33,602 | INFO     | chi2: 1.6975814330163397
[2024-05-17 23:55:55] 2024-05-17 21:55:33,602 | INFO     | current chi2=1.6975814330163397 (change=60.168439587479625 %)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,602 | INFO     | model: linear, x: [1715973744.0, 1715973805.0, 1715973866.0, 1715973927.0, 1715973988.0, 1715974049.0, 1715974110.0, 1715974171.0, 1715974232.0, 1715974293.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,602 | INFO     | sum of square deviations: 1067554900.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,603 | INFO     | sum of deviations: 3195584185.999999
[2024-05-17 23:55:55] 2024-05-17 21:55:33,603 | INFO     | mean x: 1715978319.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | mean y: 2357276.5894039734
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | -- intersect: -5134196524.732909
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | intersect: -5134196524.732909
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | chi2: 0.04851375761921422
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | current chi2=0.04851375761921422 (change=97.14218377536017 %)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,604 | INFO     | model: linear, x: [1715974049.0, 1715974110.0, 1715974171.0, 1715974232.0, 1715974293.0, 1715974354.0, 1715974415.0, 1715974476.0, 1715974537.0, 1715974598.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,605 | INFO     | sum of square deviations: 964976232.5
[2024-05-17 23:55:55] 2024-05-17 21:55:33,605 | INFO     | sum of deviations: -504423335.00000024
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | mean x: 1715978471.5
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | mean y: 2362680.5342465756
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | -- intersect: 899358434.657375
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | intersect: 899358434.657375
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | chi2: 0.0008650812986634521
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | current chi2=0.0008650812986634521 (change=98.21683303640691 %)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,606 | INFO     | model: linear, x: [1715974354.0, 1715974415.0, 1715974476.0, 1715974537.0, 1715974598.0, 1715974659.0, 1715974720.0, 1715974781.0, 1715974842.0, 1715974903.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,607 | INFO     | sum of square deviations: 869188390.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,607 | INFO     | sum of deviations: -162604832.9999999
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | mean x: 1715978624.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | mean y: 2362137.609929078
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | -- intersect: 323381632.114555
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | intersect: 323381632.114555
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | chi2: 0.0005533187945906932
[2024-05-17 23:55:55] 2024-05-17 21:55:33,608 | INFO     | current chi2=0.0005533187945906932 (change=36.038520836646335 %)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,609 | INFO     | model: linear, x: [1715974659.0, 1715974720.0, 1715974781.0, 1715974842.0, 1715974903.0, 1715974964.0, 1715975025.0, 1715975086.0, 1715975147.0, 1715975208.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,609 | INFO     | sum of square deviations: 779958810.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | sum of deviations: 86322563.99999999
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | mean x: 1715978776.5
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | mean y: 2361711.2352941176
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | -- intersect: -187555609.85639653
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | intersect: -187555609.85639653
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | chi2: 0.0004293426053275814
[2024-05-17 23:55:55] 2024-05-17 21:55:33,610 | INFO     | current chi2=0.0004293426053275814 (change=22.40592412097998 %)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,611 | INFO     | left removable region: 50
[2024-05-17 23:55:55] 2024-05-17 21:55:33,611 | INFO     | model: linear, x: [1715976184.0, 1715976245.0, 1715976306.0, 1715976367.0, 1715976428.0, 1715976489.0, 1715976550.0, 1715976611.0, 1715976672.0, 1715976733.0, 1715
[2024-05-17 23:55:55] 2024-05-17 21:55:33,611 | INFO     | sum of square deviations: 358927660.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | sum of deviations: 267613039.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | mean x: 1715979356.0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | mean y: 2360725.2952380953
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | -- intersect: -1277057111.4923277
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | intersect: -1277057111.4923277
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | chi2: 0.00020840298709596676
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | -- intersect: -1277057111.4923277
[2024-05-17 23:55:55] 2024-05-17 21:55:33,612 | INFO     | current memory leak: 0.75 B/s (using 105 data points, chi2=0.00)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | ..............................
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . Timing measurements:
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . get job = 0 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . initial setup = 1 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . payload setup = 5 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . stage-in = 0 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . payload execution = 9792 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,613 | INFO     | . stage-out = 0 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,614 | INFO     | . log creation = 0 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,614 | INFO     | ..............................
[2024-05-17 23:55:55] 2024-05-17 21:55:33,723 | INFO     | 
[2024-05-17 23:55:55] 2024-05-17 21:55:33,723 | INFO     | job summary report
[2024-05-17 23:55:55] 2024-05-17 21:55:33,723 | INFO     | --------------------------------------------------
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | PanDA job id: 6205914274
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | task id: 38776146
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | errors: (none)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | pilot state: finished 
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | transexitcode: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | exeerrorcode: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | exeerrordiag: 
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | exitcode: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | exitmsg: OK
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | cpuconsumptiontime: 36304 s
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | nevents: 400
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | neventsw: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:33,724 | INFO     | pid: 120329
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | pgrp: 120329
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | corecount: 4
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | event service: False
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | sizes: {0: 2392136, 5: 2392342, 11: 2392398, 9801: 2420903, 9803: 2429887, 9805: 2429943, 9810: 2430241}
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | --------------------------------------------------
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | 
[2024-05-17 23:55:55] 2024-05-17 21:55:33,725 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/1
[2024-05-17 23:55:55] 2024-05-17 21:55:33,744 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | job 6205914274 has completed (purged errors)
[2024-05-17 23:55:55] 2024-05-17 21:55:33,746 | INFO     | overall cleanup function is called
[2024-05-17 23:55:55] 2024-05-17 21:55:34,754 | INFO     | --- collectZombieJob: --- 10, [120329]
[2024-05-17 23:55:55] 2024-05-17 21:55:34,754 | INFO     | zombie collector waiting for pid 120329
[2024-05-17 23:55:55] 2024-05-17 21:55:34,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 23:55:55] 2024-05-17 21:55:35,759 | INFO     | collected zombie processes
[2024-05-17 23:55:55] 2024-05-17 21:55:35,760 | INFO     | will now attempt to kill all subprocesses of pid=120329
[2024-05-17 23:55:55] 2024-05-17 21:55:35,997 | INFO     | process IDs to be killed: [120329] (in reverse order)
[2024-05-17 23:55:55] 2024-05-17 21:55:36,160 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 23:55:55] 2024-05-17 21:55:36,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 23:55:55] 2024-05-17 21:55:36,177 | INFO     | did not find any defunct processes belonging to 120329
[2024-05-17 23:55:55] 2024-05-17 21:55:36,190 | INFO     | did not find any defunct processes belonging to 120329
[2024-05-17 23:55:55] 2024-05-17 21:55:36,190 | INFO     | ready for new job
[2024-05-17 23:55:55] 2024-05-17 21:55:36,190 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 23:55:55] 2024-05-17 21:55:36,192 | INFO     | *************************************
[2024-05-17 23:55:55] 2024-05-17 21:55:36,192 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 23:55:55] 2024-05-17 21:55:36,192 | INFO     | *************************************
[2024-05-17 23:55:55] 2024-05-17 21:55:36,192 | INFO     | 
[2024-05-17 23:55:55] 2024-05-17 21:55:36,200 | INFO     | architecture information:
[2024-05-17 23:55:55] 2024-05-17 21:55:36,200 | INFO     | executing command: cat /etc/os-release
[2024-05-17 23:55:55] 2024-05-17 21:55:36,217 | INFO     | cat /etc/os-release:
[2024-05-17 23:55:55] NAME="CentOS Linux"
[2024-05-17 23:55:55] VERSION="7 (Core)"
[2024-05-17 23:55:55] ID="centos"
[2024-05-17 23:55:55] ID_LIKE="rhel fedora"
[2024-05-17 23:55:55] VERSION_ID="7"
[2024-05-17 23:55:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 23:55:55] ANSI_COLOR="0;31"
[2024-05-17 23:55:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 23:55:55] HOME_URL="https://www.centos.org/"
[2024-05-17 23:55:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 23:55:55] 
[2024-05-17 23:55:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 23:55:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 23:55:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 23:55:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 23:55:55] 
[2024-05-17 23:55:55] 2024-05-17 21:55:36,218 | INFO     | *************************************
[2024-05-17 23:55:55] 2024-05-17 21:55:36,721 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/1
[2024-05-17 23:55:55] 2024-05-17 21:55:36,739 | INFO     | sufficient remaining disk space (3083556880384 B)
[2024-05-17 23:55:55] 2024-05-17 21:55:36,739 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 23:55:55] 2024-05-17 21:55:36,739 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 23:55:55] 2024-05-17 21:55:36,739 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 23:55:55] 2024-05-17 21:55:36,740 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 23:55:55] 2024-05-17 21:55:36,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 23:55:55] 2024-05-17 21:55:36,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 23:55:55] 2024-05-17 21:55:37,117 | INFO     | all data control threads have been joined
[2024-05-17 23:55:55] 2024-05-17 21:55:37,187 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-17 23:55:55] 2024-05-17 21:55:37,187 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-17 23:55:55] 2024-05-17 21:55:37,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 23:55:55] 2024-05-17 21:55:37,187 | INFO     | will abort loop
[2024-05-17 23:55:55] 2024-05-17 21:55:37,610 | INFO     | all job control threads have been joined
[2024-05-17 23:55:55] 2024-05-17 21:55:37,683 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 23:55:55] 2024-05-17 21:55:37,745 | INFO     | [job] retrieve thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:37,814 | INFO     | [payload] validate_post thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:37,965 | INFO     | [payload] failed_post thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:37,974 | INFO     | [data] copytool_in thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,080 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,122 | INFO     | [data] control thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,131 | INFO     | all payload control threads have been joined
[2024-05-17 23:55:55] 2024-05-17 21:55:38,174 | INFO     | [job] validate thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,193 | INFO     | [job] job monitor thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,509 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,552 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,616 | INFO     | [job] control thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:38,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 23:55:55] 2024-05-17 21:55:39,136 | INFO     | [payload] control thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:39,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 23:55:55] 2024-05-17 21:55:39,688 | INFO     | [data] copytool_out thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:39,739 | INFO     | [job] queue monitor thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:43,195 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:46,990 | INFO     | job.realtimelogging is not enabled
[2024-05-17 23:55:55] 2024-05-17 21:55:47,992 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 23:55:55] 2024-05-17 21:55:49,549 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47899267204160)>', '<ExcThread(monitor, started 47899438716672)>']
[2024-05-17 23:55:55] 2024-05-17 21:55:49,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 23:55:55] 2024-05-17 21:55:49,804 | INFO     | [monitor] control thread has ended
[2024-05-17 23:55:55] 2024-05-17 21:55:54,575 | INFO     | all workflow threads have been joined
[2024-05-17 23:55:55] 2024-05-17 21:55:54,575 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 23:55:55] 2024-05-17 21:55:54,575 | INFO     | traces error code: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:54,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 23:55:55] 2024-05-17 21:55:54,637 [wrapper] ==== pilot stdout END ====
[2024-05-17 23:55:55] 2024-05-17 21:55:54,639 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 23:55:55] 2024-05-17 21:55:54,642 [wrapper] pilotpid: 112615
[2024-05-17 23:55:55] 2024-05-17 21:55:54,644 [wrapper] Pilot exit status: 0
[2024-05-17 23:55:55] 2024-05-17 21:55:54,651 [wrapper] pandaids: 6205914274
[2024-05-17 23:55:55] 2024-05-17 21:55:54,776 [wrapper] cleanup: SIGTERM to supervisor_pilot  657698 112616
[2024-05-17 23:55:55] 2024-05-17 21:55:54,778 [wrapper] Test setup, not cleaning
[2024-05-17 23:55:55] 2024-05-17 21:55:54,780 [wrapper] ==== wrapper stdout END ====
[2024-05-17 23:55:55] 2024-05-17 21:55:54,781 [wrapper] ==== wrapper stderr END ====
[2024-05-17 23:55:55] 2024-05-17 21:55:54,784 [wrapper] apfmon messages muted
[2024-05-17 23:55:55]  *** Error codes and diagnostics ***
[2024-05-17 23:55:55]     "exeErrorCode": 0,
[2024-05-17 23:55:55]     "exeErrorDiag": "",
[2024-05-17 23:55:55]     "pilotErrorCode": 0,
[2024-05-17 23:55:55]     "pilotErrorDiag": "",
[2024-05-17 23:55:55]  *** Listing of results directory ***
[2024-05-17 23:55:55] total 878028
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc      5633 May 13 22:18 queuedata.json
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc    467845 May 13 22:18 pilot3.tar.gz
[2024-05-17 23:55:55] -rwx------ 1 boinc boinc     32251 May 13 22:18 runpilot2-wrapper.sh
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc       100 May 17 21:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 23:55:55] -rwxr-xr-x 1 boinc boinc      7986 May 17 21:11 run_atlas
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc       105 May 17 21:11 job.xml
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc      6644 May 17 21:11 init_data.xml
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc 616090712 May 17 21:11 EVNT.38776140._000346.pool.root.1
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc     17537 May 17 21:11 start_atlas.sh
[2024-05-17 23:55:55] drwxrwx--x 2 boinc boinc      4096 May 17 21:11 shared
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc    479989 May 17 21:11 input.tar.gz
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc         0 May 17 21:11 boinc_lockfile
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc      2613 May 17 21:11 pandaJob.out
[2024-05-17 23:55:55] -rw------- 1 boinc boinc       424 May 17 21:11 setup.sh.local
[2024-05-17 23:55:55] -rw------- 1 boinc boinc   1019073 May 17 21:11 agis_schedconf.cvmfs.json
[2024-05-17 23:55:55] -rw------- 1 boinc boinc         0 May 17 21:11 agis_ddmendpoints.agis.ALL.json
[2024-05-17 23:55:55] -rw------- 1 boinc boinc   1324701 May 17 21:11 cric_ddmendpoints.json
[2024-05-17 23:55:55] drwx------ 4 boinc boinc      4096 May 17 21:11 pilot3
[2024-05-17 23:55:55] -rw------- 1 boinc boinc 276783784 May 17 23:54 HITS.38776146._008661.pool.root.1
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc       531 May 17 23:55 boinc_task_state.xml
[2024-05-17 23:55:55] -rw------- 1 boinc boinc        95 May 17 23:55 pilot_heartbeat.json
[2024-05-17 23:55:55] -rw------- 1 boinc boinc      1042 May 17 23:55 memory_monitor_summary.json
[2024-05-17 23:55:55] -rw------- 1 boinc boinc    307292 May 17 23:55 log.38776146._008661.job.log.tgz.1
[2024-05-17 23:55:55] -rw------- 1 boinc boinc      7722 May 17 23:55 heartbeat.json
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc      8192 May 17 23:55 boinc_mmap_file
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc        27 May 17 23:55 wrapper_checkpoint.txt
[2024-05-17 23:55:55] -rw------- 1 boinc boinc      4604 May 17 23:55 pilotlog.txt
[2024-05-17 23:55:55] -rw------- 1 boinc boinc   1036966 May 17 23:55 log.38776146._008661.job.log.1
[2024-05-17 23:55:55] -rw------- 1 boinc boinc       357 May 17 23:55 output.list
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc       620 May 17 23:55 runtime_log
[2024-05-17 23:55:55] -rw------- 1 boinc boinc   1361920 May 17 23:55 result.tar.gz
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc     11428 May 17 23:55 runtime_log.err
[2024-05-17 23:55:55] -rw------- 1 boinc boinc       657 May 17 23:55 N4EMDmXJrQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmESHKDmiGXiLn.diag
[2024-05-17 23:55:55] -rw-r--r-- 1 boinc boinc     21415 May 17 23:55 stderr.txt
[2024-05-17 23:55:55] HITS file was successfully produced:
[2024-05-17 23:55:55] -rw------- 1 boinc boinc 276783784 May 17 23:54 shared/HITS.pool.root.1
[2024-05-17 23:55:55]  *** Contents of shared directory: ***
[2024-05-17 23:55:55] total 873784
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc 616090712 May 17 21:11 ATLAS.root_0
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc     17537 May 17 21:11 start_atlas.sh
[2024-05-17 23:55:55] -rw-r--r-- 2 boinc boinc    479989 May 17 21:11 input.tar.gz
[2024-05-17 23:55:55] -rw------- 1 boinc boinc 276783784 May 17 23:54 HITS.pool.root.1
[2024-05-17 23:55:55] -rw------- 1 boinc boinc   1361920 May 17 23:55 result.tar.gz
23:55:56 (107942): run_atlas exited; CPU time 35982.771790
23:55:56 (107942): called boinc_finish(0)

</stderr_txt>
]]>

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