Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:18:01 (3941184): wrapper (7.7.26015): starting
06:18:01 (3941184): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 06:18:01] Arguments: --nthreads 4
[2024-05-16 06:18:01] Threads: 4
[2024-05-16 06:18:01] Checking for CVMFS
[2024-05-16 06:18:01] No cvmfs_config command found, will try listing directly
[2024-05-16 06:18:01] CVMFS is ok
[2024-05-16 06:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 06:18:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 06:18:01] Further information can be found at the LHC@home message board.
[2024-05-16 06:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 06:18:01] Checking for apptainer binary...
[2024-05-16 06:18:01] which: no apptainer in ((null))
[2024-05-16 06:18:01] apptainer is not installed, using version from CVMFS
[2024-05-16 06:18:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 06:18:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-16 06:18:01] apptainer works
[2024-05-16 06:18:02] Set ATHENA_PROC_NUMBER=4
[2024-05-16 06:18:02] Set ATHENA_CORE_NUMBER=4
[2024-05-16 06:18:02] Starting ATLAS job with PandaID=6205914257
[2024-05-16 06:18:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 10:45:35]  *** The last 200 lines of the pilot log: ***
[2024-05-16 10:45:35] 2024-05-16 08:45:14,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 10:45:35] 2024-05-16 08:45:14,573 | INFO     | fitting pss+swap vs Time
[2024-05-16 10:45:35] 2024-05-16 08:45:14,573 | INFO     | model: linear, x: [1715833118.0, 1715833179.0, 1715833240.0, 1715833301.0, 1715833362.0, 1715833423.0, 1715833484.0, 1715833545.0, 1715833606.0, 1715833667.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,573 | INFO     | sum of square deviations: 5640782972.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,575 | INFO     | sum of deviations: 117939036935.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,575 | INFO     | mean x: 1715841109.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,575 | INFO     | mean y: 2276015.425855513
[2024-05-16 10:45:35] 2024-05-16 08:45:14,575 | INFO     | -- intersect: -35873000330.68604
[2024-05-16 10:45:35] 2024-05-16 08:45:14,575 | INFO     | intersect: -35873000330.68604
[2024-05-16 10:45:35] 2024-05-16 08:45:14,576 | INFO     | chi2: 5.093011398133925
[2024-05-16 10:45:35] 2024-05-16 08:45:14,576 | INFO     | model: linear, x: [1715833118.0, 1715833179.0, 1715833240.0, 1715833301.0, 1715833362.0, 1715833423.0, 1715833484.0, 1715833545.0, 1715833606.0, 1715833667.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,576 | INFO     | sum of square deviations: 5325139844.5
[2024-05-16 10:45:35] 2024-05-16 08:45:14,578 | INFO     | sum of deviations: 132100180530.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,578 | INFO     | mean x: 1715840956.5
[2024-05-16 10:45:35] 2024-05-16 08:45:14,578 | INFO     | mean y: 2282731.9457364343
[2024-05-16 10:45:35] 2024-05-16 08:45:14,578 | INFO     | -- intersect: -42562402277.880554
[2024-05-16 10:45:35] 2024-05-16 08:45:14,579 | INFO     | intersect: -42562402277.880554
[2024-05-16 10:45:35] 2024-05-16 08:45:14,579 | INFO     | chi2: 4.293472316702288
[2024-05-16 10:45:35] 2024-05-16 08:45:14,579 | INFO     | current chi2=4.293472316702288 (change=15.698749107936166 %)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,579 | INFO     | right removable region: 257
[2024-05-16 10:45:35] 2024-05-16 08:45:14,579 | INFO     | model: linear, x: [1715833423.0, 1715833484.0, 1715833545.0, 1715833606.0, 1715833667.0, 1715833728.0, 1715833789.0, 1715833850.0, 1715833911.0, 1715833972.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,580 | INFO     | sum of square deviations: 5325139844.5
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | sum of deviations: 55476315007.00002
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | mean x: 1715841261.5
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | mean y: 2306134.465116279
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | -- intersect: -17873008524.791492
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | intersect: -17873008524.791492
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | chi2: 2.5164589193243074
[2024-05-16 10:45:35] 2024-05-16 08:45:14,582 | INFO     | current chi2=2.5164589193243074 (change=50.589960975812154 %)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,583 | INFO     | model: linear, x: [1715833728.0, 1715833789.0, 1715833850.0, 1715833911.0, 1715833972.0, 1715834033.0, 1715834094.0, 1715834155.0, 1715834216.0, 1715834277.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,583 | INFO     | sum of square deviations: 5021496942.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | sum of deviations: 3939568978.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | mean x: 1715841414.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | mean y: 2332021.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | -- intersect: -1343815489.1625292
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | intersect: -1343815489.1625292
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | chi2: 0.9033420452900304
[2024-05-16 10:45:35] 2024-05-16 08:45:14,585 | INFO     | current chi2=0.9033420452900304 (change=64.10265081805564 %)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,586 | INFO     | model: linear, x: [1715834033.0, 1715834094.0, 1715834155.0, 1715834216.0, 1715834277.0, 1715834338.0, 1715834399.0, 1715834460.0, 1715834521.0, 1715834582.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,586 | INFO     | sum of square deviations: 4729621702.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | sum of deviations: -4392258335.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | mean x: 1715841566.5
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | mean y: 2336339.4516129033
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | -- intersect: 1595787126.184129
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | intersect: 1595787126.184129
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | chi2: 0.8372857392189297
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | current chi2=0.8372857392189297 (change=7.312435684302994 %)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,588 | INFO     | left removable region: 30
[2024-05-16 10:45:35] 2024-05-16 08:45:14,589 | INFO     | model: linear, x: [1715834948.0, 1715835009.0, 1715835070.0, 1715835131.0, 1715835192.0, 1715835253.0, 1715835314.0, 1715835375.0, 1715835436.0, 1715835497.0, 1715
[2024-05-16 10:45:35] 2024-05-16 08:45:14,589 | INFO     | sum of square deviations: 3627000098.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,590 | INFO     | sum of deviations: 6875664776.00001
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | mean x: 1715841841.0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | mean y: 2347192.625550661
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | -- intersect: -3250355588.8979774
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | intersect: -3250355588.8979774
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | chi2: 0.00048239433272517725
[2024-05-16 10:45:35] 2024-05-16 08:45:14,591 | INFO     | -- intersect: -3250355588.8979774
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | current memory leak: 1.90 B/s (using 227 data points, chi2=0.00)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | ..............................
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . Timing measurements:
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . get job = 0 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . initial setup = 1 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . payload setup = 5 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . stage-in = 0 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . payload execution = 15991 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . stage-out = 0 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | . log creation = 0 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,592 | INFO     | ..............................
[2024-05-16 10:45:35] 2024-05-16 08:45:14,847 | INFO     | 
[2024-05-16 10:45:35] 2024-05-16 08:45:14,847 | INFO     | job summary report
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | --------------------------------------------------
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | PanDA job id: 6205914257
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | task id: 38776146
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | errors: (none)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | pilot state: finished 
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | transexitcode: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | exeerrorcode: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | exeerrordiag: 
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | exitcode: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | exitmsg: OK
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | cpuconsumptiontime: 61013 s
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | nevents: 400
[2024-05-16 10:45:35] 2024-05-16 08:45:14,848 | INFO     | neventsw: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | pid: 3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | pgrp: 3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | corecount: 4
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | event service: False
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | sizes: {0: 2392012, 1: 2392211, 5: 2392417, 11: 2392473, 16000: 2423969, 16001: 2433135, 16007: 2433249}
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | --------------------------------------------------
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | 
[2024-05-16 10:45:35] 2024-05-16 08:45:14,849 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,879 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,879 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 10:45:35] 2024-05-16 08:45:14,879 | INFO     | job 6205914257 has completed (purged errors)
[2024-05-16 10:45:35] 2024-05-16 08:45:14,879 | INFO     | overall cleanup function is called
[2024-05-16 10:45:35] 2024-05-16 08:45:15,887 | INFO     | --- collectZombieJob: --- 10, [3965361]
[2024-05-16 10:45:35] 2024-05-16 08:45:15,887 | INFO     | zombie collector waiting for pid 3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:15,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 10:45:35] 2024-05-16 08:45:16,892 | INFO     | collected zombie processes
[2024-05-16 10:45:35] 2024-05-16 08:45:16,892 | INFO     | will now attempt to kill all subprocesses of pid=3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:17,099 | INFO     | process IDs to be killed: [3965361] (in reverse order)
[2024-05-16 10:45:35] 2024-05-16 08:45:17,284 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 10:45:35] 2024-05-16 08:45:17,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 10:45:35] 2024-05-16 08:45:17,302 | INFO     | did not find any defunct processes belonging to 3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:17,316 | INFO     | did not find any defunct processes belonging to 3965361
[2024-05-16 10:45:35] 2024-05-16 08:45:17,316 | INFO     | ready for new job
[2024-05-16 10:45:35] 2024-05-16 08:45:17,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 10:45:35] 2024-05-16 08:45:17,318 | INFO     | *************************************
[2024-05-16 10:45:35] 2024-05-16 08:45:17,318 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 10:45:35] 2024-05-16 08:45:17,319 | INFO     | *************************************
[2024-05-16 10:45:35] 2024-05-16 08:45:17,319 | INFO     | 
[2024-05-16 10:45:35] 2024-05-16 08:45:17,325 | INFO     | architecture information:
[2024-05-16 10:45:35] 2024-05-16 08:45:17,325 | INFO     | executing command: cat /etc/os-release
[2024-05-16 10:45:35] 2024-05-16 08:45:17,341 | INFO     | cat /etc/os-release:
[2024-05-16 10:45:35] NAME="CentOS Linux"
[2024-05-16 10:45:35] VERSION="7 (Core)"
[2024-05-16 10:45:35] ID="centos"
[2024-05-16 10:45:35] ID_LIKE="rhel fedora"
[2024-05-16 10:45:35] VERSION_ID="7"
[2024-05-16 10:45:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 10:45:35] ANSI_COLOR="0;31"
[2024-05-16 10:45:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 10:45:35] HOME_URL="https://www.centos.org/"
[2024-05-16 10:45:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 10:45:35] 
[2024-05-16 10:45:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 10:45:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 10:45:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 10:45:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 10:45:35] 
[2024-05-16 10:45:35] 2024-05-16 08:45:17,341 | INFO     | *************************************
[2024-05-16 10:45:35] 2024-05-16 08:45:17,844 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-16 10:45:35] 2024-05-16 08:45:17,860 | INFO     | sufficient remaining disk space (2969330253824 B)
[2024-05-16 10:45:35] 2024-05-16 08:45:17,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 10:45:35] 2024-05-16 08:45:17,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 10:45:35] 2024-05-16 08:45:17,861 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 10:45:35] 2024-05-16 08:45:17,861 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 10:45:35] 2024-05-16 08:45:17,861 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 10:45:35] 2024-05-16 08:45:17,862 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 10:45:35] 2024-05-16 08:45:17,862 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 10:45:35] 2024-05-16 08:45:18,114 | INFO     | all job control threads have been joined
[2024-05-16 10:45:35] 2024-05-16 08:45:18,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 10:45:35] 2024-05-16 08:45:18,668 | INFO     | aborting loop
[2024-05-16 10:45:35] 2024-05-16 08:45:18,800 | INFO     | all data control threads have been joined
[2024-05-16 10:45:35] 2024-05-16 08:45:18,865 | INFO     | [job] retrieve thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:18,869 | INFO     | [payload] validate_post thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,020 | INFO     | all payload control threads have been joined
[2024-05-16 10:45:35] 2024-05-16 08:45:19,119 | INFO     | [job] control thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,372 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,384 | INFO     | [payload] failed_post thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,454 | INFO     | [job] validate thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,660 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 10:45:35] 2024-05-16 08:45:19,664 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,672 | INFO     | [job] job monitor thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,805 | INFO     | [data] control thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,866 | INFO     | [data] copytool_out thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:19,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 10:45:35] 2024-05-16 08:45:19,885 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:20,025 | INFO     | [payload] control thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:20,134 | INFO     | [data] copytool_in thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:20,665 | INFO     | [job] queue monitor thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:23,877 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:28,437 | INFO     | job.realtimelogging is not enabled
[2024-05-16 10:45:35] 2024-05-16 08:45:29,442 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 10:45:35] 2024-05-16 08:45:29,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47956254098496)>', '<ExcThread(monitor, started 47956427450112)>']
[2024-05-16 10:45:35] 2024-05-16 08:45:29,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 10:45:35] 2024-05-16 08:45:29,921 | INFO     | [monitor] control thread has ended
[2024-05-16 10:45:35] 2024-05-16 08:45:34,664 | INFO     | all workflow threads have been joined
[2024-05-16 10:45:35] 2024-05-16 08:45:34,664 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 10:45:35] 2024-05-16 08:45:34,665 | INFO     | traces error code: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:34,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 10:45:35] 2024-05-16 08:45:34,746 [wrapper] ==== pilot stdout END ====
[2024-05-16 10:45:35] 2024-05-16 08:45:34,750 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 10:45:35] 2024-05-16 08:45:34,752 [wrapper] pilotpid: 3950496
[2024-05-16 10:45:35] 2024-05-16 08:45:34,754 [wrapper] Pilot exit status: 0
[2024-05-16 10:45:35] 2024-05-16 08:45:34,763 [wrapper] pandaids: 6205914257
[2024-05-16 10:45:35] 2024-05-16 08:45:34,891 [wrapper] cleanup: SIGTERM to supervisor_pilot 1178125 3950497
[2024-05-16 10:45:35] 2024-05-16 08:45:34,893 [wrapper] Test setup, not cleaning
[2024-05-16 10:45:35] 2024-05-16 08:45:34,895 [wrapper] ==== wrapper stdout END ====
[2024-05-16 10:45:35] 2024-05-16 08:45:34,900 [wrapper] ==== wrapper stderr END ====
[2024-05-16 10:45:35] 2024-05-16 08:45:34,904 [wrapper] apfmon messages muted
[2024-05-16 10:45:35]  *** Error codes and diagnostics ***
[2024-05-16 10:45:35]     "exeErrorCode": 0,
[2024-05-16 10:45:35]     "exeErrorDiag": "",
[2024-05-16 10:45:35]     "pilotErrorCode": 0,
[2024-05-16 10:45:35]     "pilotErrorDiag": "",
[2024-05-16 10:45:35]  *** Listing of results directory ***
[2024-05-16 10:45:35] total 879924
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc    467845 May 13 21:50 pilot3.tar.gz
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc      5633 May 13 22:12 queuedata.json
[2024-05-16 10:45:35] -rwx------ 1 boinc boinc     32251 May 13 22:16 runpilot2-wrapper.sh
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc       100 May 16 06:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 10:45:35] -rwxr-xr-x 1 boinc boinc      7986 May 16 06:17 run_atlas
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc       105 May 16 06:17 job.xml
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc    479995 May 16 06:18 input.tar.gz
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc      6644 May 16 06:18 init_data.xml
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc 616090712 May 16 06:18 EVNT.38776140._000346.pool.root.1
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc     17537 May 16 06:18 start_atlas.sh
[2024-05-16 10:45:35] drwxrwx--x 2 boinc boinc      4096 May 16 06:18 shared
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc         0 May 16 06:18 boinc_lockfile
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc      2612 May 16 06:18 pandaJob.out
[2024-05-16 10:45:35] -rw------- 1 boinc boinc       424 May 16 06:18 setup.sh.local
[2024-05-16 10:45:35] -rw------- 1 boinc boinc   1011347 May 16 06:18 agis_schedconf.cvmfs.json
[2024-05-16 10:45:35] -rw------- 1 boinc boinc   1324701 May 16 06:18 cric_ddmendpoints.json
[2024-05-16 10:45:35] drwx------ 4 boinc boinc      4096 May 16 06:18 pilot3
[2024-05-16 10:45:35] -rw------- 1 boinc boinc 277224600 May 16 10:44 HITS.38776146._008644.pool.root.1
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc       532 May 16 10:45 boinc_task_state.xml
[2024-05-16 10:45:35] -rw------- 1 boinc boinc        95 May 16 10:45 pilot_heartbeat.json
[2024-05-16 10:45:35] -rw------- 1 boinc boinc      1044 May 16 10:45 memory_monitor_summary.json
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc      8192 May 16 10:45 boinc_mmap_file
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc        28 May 16 10:45 wrapper_checkpoint.txt
[2024-05-16 10:45:35] -rw------- 1 boinc boinc         0 May 16 10:45 agis_ddmendpoints.agis.ALL.json
[2024-05-16 10:45:35] -rw------- 1 boinc boinc    357330 May 16 10:45 log.38776146._008644.job.log.tgz.1
[2024-05-16 10:45:35] -rw------- 1 boinc boinc      7720 May 16 10:45 heartbeat.json
[2024-05-16 10:45:35] -rw------- 1 boinc boinc      4417 May 16 10:45 pilotlog.txt
[2024-05-16 10:45:35] -rw------- 1 boinc boinc   1742522 May 16 10:45 log.38776146._008644.job.log.1
[2024-05-16 10:45:35] -rw------- 1 boinc boinc       357 May 16 10:45 output.list
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc       620 May 16 10:45 runtime_log
[2024-05-16 10:45:35] -rw------- 1 boinc boinc   2119680 May 16 10:45 result.tar.gz
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc     11410 May 16 10:45 runtime_log.err
[2024-05-16 10:45:35] -rw------- 1 boinc boinc       657 May 16 10:45 Db4NDmtGrQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm8MLKDmC094bm.diag
[2024-05-16 10:45:35] -rw-r--r-- 1 boinc boinc     21312 May 16 10:45 stderr.txt
[2024-05-16 10:45:35] HITS file was successfully produced:
[2024-05-16 10:45:35] -rw------- 1 boinc boinc 277224600 May 16 10:44 shared/HITS.pool.root.1
[2024-05-16 10:45:35]  *** Contents of shared directory: ***
[2024-05-16 10:45:35] total 874952
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc    479995 May 16 06:18 input.tar.gz
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc 616090712 May 16 06:18 ATLAS.root_0
[2024-05-16 10:45:35] -rw-r--r-- 2 boinc boinc     17537 May 16 06:18 start_atlas.sh
[2024-05-16 10:45:35] -rw------- 1 boinc boinc 277224600 May 16 10:44 HITS.pool.root.1
[2024-05-16 10:45:35] -rw------- 1 boinc boinc   2119680 May 16 10:45 result.tar.gz
10:45:37 (3941184): run_atlas exited; CPU time 60601.789224
10:45:37 (3941184): called boinc_finish(0)

</stderr_txt>
]]>

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