Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:46 (2671986): wrapper (7.7.26015): starting
12:04:46 (2671986): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 12:04:46] Arguments: --nthreads 4
[2024-05-16 12:04:46] Threads: 4
[2024-05-16 12:04:46] Checking for CVMFS
[2024-05-16 12:04:46] No cvmfs_config command found, will try listing directly
[2024-05-16 12:04:46] CVMFS is ok
[2024-05-16 12:04:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 12:04:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 12:04:46] Further information can be found at the LHC@home message board.
[2024-05-16 12:04:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 12:04:46] Checking for apptainer binary...
[2024-05-16 12:04:46] which: no apptainer in ((null))
[2024-05-16 12:04:46] apptainer is not installed, using version from CVMFS
[2024-05-16 12:04:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 12:04:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 12:04:47] apptainer works
[2024-05-16 12:04:47] Set ATHENA_PROC_NUMBER=4
[2024-05-16 12:04:47] Set ATHENA_CORE_NUMBER=4
[2024-05-16 12:04:47] Starting ATLAS job with PandaID=6205899552
[2024-05-16 12:04:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 15:59:49]  *** The last 200 lines of the pilot log: ***
[2024-05-16 15:59:49] 2024-05-16 13:59:30,724 | INFO     | current chi2=4.245744076583182 (change=0.005274829841987999 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,724 | INFO     | right removable region: 224
[2024-05-16 15:59:49] 2024-05-16 13:59:30,724 | INFO     | model: linear, x: [1715854243.0, 1715854304.0, 1715854365.0, 1715854426.0, 1715854487.0, 1715854548.0, 1715854609.0, 1715854670.0, 1715854731.0, 1715854792.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,724 | INFO     | sum of square deviations: 3531973200.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | sum of deviations: 55291543811.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | mean x: 1715861075.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | mean y: 2327469.3466666667
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | -- intersect: -26858750582.421124
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | intersect: -26858750582.421124
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | chi2: 1.6066971672513946
[2024-05-16 15:59:49] 2024-05-16 13:59:30,726 | INFO     | current chi2=1.6066971672513946 (change=62.15946162250343 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,727 | INFO     | model: linear, x: [1715854548.0, 1715854609.0, 1715854670.0, 1715854731.0, 1715854792.0, 1715854853.0, 1715854914.0, 1715854975.0, 1715855036.0, 1715855097.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,727 | INFO     | sum of square deviations: 3301699115.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,728 | INFO     | sum of deviations: 11502936285.999998
[2024-05-16 15:59:49] 2024-05-16 13:59:30,728 | INFO     | mean x: 1715861227.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,728 | INFO     | mean y: 2356470.0454545454
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | -- intersect: -5975608719.417379
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | intersect: -5975608719.417379
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | chi2: 0.08766873451812492
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | current chi2=0.08766873451812492 (change=94.54354334438136 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | model: linear, x: [1715854853.0, 1715854914.0, 1715854975.0, 1715855036.0, 1715855097.0, 1715855158.0, 1715855219.0, 1715855280.0, 1715855341.0, 1715855402.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,729 | INFO     | sum of square deviations: 3081657780.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,731 | INFO     | sum of deviations: 3656924135.999999
[2024-05-16 15:59:49] 2024-05-16 13:59:30,731 | INFO     | mean x: 1715861380.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,731 | INFO     | mean y: 2361851.1441860464
[2024-05-16 15:59:49] 2024-05-16 13:59:30,731 | INFO     | -- intersect: -2033806777.0778182
[2024-05-16 15:59:49] 2024-05-16 13:59:30,731 | INFO     | intersect: -2033806777.0778182
[2024-05-16 15:59:49] 2024-05-16 13:59:30,732 | INFO     | chi2: 0.000800536823447046
[2024-05-16 15:59:49] 2024-05-16 13:59:30,732 | INFO     | current chi2=0.000800536823447046 (change=99.08686166414145 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,732 | INFO     | model: linear, x: [1715855158.0, 1715855219.0, 1715855280.0, 1715855341.0, 1715855402.0, 1715855463.0, 1715855524.0, 1715855585.0, 1715855646.0, 1715855707.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,732 | INFO     | sum of square deviations: 2871616632.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | sum of deviations: 3013201719.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | mean x: 1715861532.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | mean y: 2362316.1952380952
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | -- intersect: -1798099786.4538019
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | intersect: -1798099786.4538019
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | chi2: 0.0005924768247145123
[2024-05-16 15:59:49] 2024-05-16 13:59:30,734 | INFO     | current chi2=0.0005924768247145123 (change=25.99005974973699 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,735 | INFO     | model: linear, x: [1715855463.0, 1715855524.0, 1715855585.0, 1715855646.0, 1715855707.0, 1715855768.0, 1715855829.0, 1715855890.0, 1715855951.0, 1715856012.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,735 | INFO     | sum of square deviations: 2671343110.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,736 | INFO     | sum of deviations: 2707191772.999999
[2024-05-16 15:59:49] 2024-05-16 13:59:30,736 | INFO     | mean x: 1715861685.0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,736 | INFO     | mean y: 2362548.814634146
[2024-05-16 15:59:49] 2024-05-16 13:59:30,736 | INFO     | -- intersect: -1736525510.846828
[2024-05-16 15:59:49] 2024-05-16 13:59:30,736 | INFO     | intersect: -1736525510.846828
[2024-05-16 15:59:49] 2024-05-16 13:59:30,737 | INFO     | chi2: 0.000579249077768949
[2024-05-16 15:59:49] 2024-05-16 13:59:30,737 | INFO     | current chi2=0.000579249077768949 (change=2.2326184575974044 %)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,737 | INFO     | left removable region: 50
[2024-05-16 15:59:49] 2024-05-16 13:59:30,737 | INFO     | model: linear, x: [1715856988.0, 1715857049.0, 1715857110.0, 1715857171.0, 1715857232.0, 1715857293.0, 1715857354.0, 1715857415.0, 1715857476.0, 1715857537.0, 1715
[2024-05-16 15:59:49] 2024-05-16 13:59:30,737 | INFO     | sum of square deviations: 1633472487.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,738 | INFO     | sum of deviations: 2151025340.5000005
[2024-05-16 15:59:49] 2024-05-16 13:59:30,738 | INFO     | mean x: 1715862264.5
[2024-05-16 15:59:49] 2024-05-16 13:59:30,738 | INFO     | mean y: 2362760.603448276
[2024-05-16 15:59:49] 2024-05-16 13:59:30,738 | INFO     | -- intersect: -2257156906.848076
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | intersect: -2257156906.848076
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | chi2: 0.0004774863678772853
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | -- intersect: -2257156906.848076
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | current memory leak: 1.32 B/s (using 174 data points, chi2=0.00)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | ..............................
[2024-05-16 15:59:49] 2024-05-16 13:59:30,739 | INFO     | . Timing measurements:
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . get job = 0 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . initial setup = 1 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . payload setup = 9 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . stage-in = 0 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . payload execution = 14025 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . stage-out = 0 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | . log creation = 0 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,740 | INFO     | ..............................
[2024-05-16 15:59:49] 2024-05-16 13:59:30,838 | INFO     | 
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | job summary report
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | --------------------------------------------------
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | PanDA job id: 6205899552
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | task id: 38776146
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | errors: (none)
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | pilot state: finished 
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | transexitcode: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | exeerrorcode: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | exeerrordiag: 
[2024-05-16 15:59:49] 2024-05-16 13:59:30,839 | INFO     | exitcode: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | exitmsg: OK
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | cpuconsumptiontime: 53304 s
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | nevents: 400
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | neventsw: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | pid: 2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | pgrp: 2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | corecount: 4
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | event service: False
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | sizes: {0: 2390666, 1: 2392213, 8: 2392419, 12: 2392447, 14038: 2422872, 14039: 2431854, 14041: 2432038, 14050: 2432208}
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | --------------------------------------------------
[2024-05-16 15:59:49] 2024-05-16 13:59:30,840 | INFO     | 
[2024-05-16 15:59:49] 2024-05-16 13:59:30,841 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2024-05-16 15:59:49] 2024-05-16 13:59:31,014 | WARNING  | process 2699577 is no longer using CPU - aborting
[2024-05-16 15:59:49] 2024-05-16 13:59:31,019 | INFO     | aborting job monitoring since job object (job id=6205899552) has expired
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,035 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,036 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 15:59:49] 2024-05-16 13:59:31,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,037 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 15:59:49] 2024-05-16 13:59:31,037 | INFO     | job 6205899552 has completed (purged errors)
[2024-05-16 15:59:49] 2024-05-16 13:59:31,037 | INFO     | overall cleanup function is called
[2024-05-16 15:59:49] 2024-05-16 13:59:32,044 | INFO     | --- collectZombieJob: --- 10, [2699577]
[2024-05-16 15:59:49] 2024-05-16 13:59:32,044 | INFO     | zombie collector waiting for pid 2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:32,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 15:59:49] 2024-05-16 13:59:33,049 | INFO     | collected zombie processes
[2024-05-16 15:59:49] 2024-05-16 13:59:33,049 | INFO     | will now attempt to kill all subprocesses of pid=2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:33,332 | INFO     | process IDs to be killed: [2699577] (in reverse order)
[2024-05-16 15:59:49] 2024-05-16 13:59:33,540 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 15:59:49] 2024-05-16 13:59:33,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 15:59:49] 2024-05-16 13:59:33,554 | INFO     | did not find any defunct processes belonging to 2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:33,565 | INFO     | did not find any defunct processes belonging to 2699577
[2024-05-16 15:59:49] 2024-05-16 13:59:33,565 | INFO     | ready for new job
[2024-05-16 15:59:49] 2024-05-16 13:59:33,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 15:59:49] 2024-05-16 13:59:33,566 | INFO     | *************************************
[2024-05-16 15:59:49] 2024-05-16 13:59:33,566 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 15:59:49] 2024-05-16 13:59:33,567 | INFO     | *************************************
[2024-05-16 15:59:49] 2024-05-16 13:59:33,567 | INFO     | 
[2024-05-16 15:59:49] 2024-05-16 13:59:33,571 | INFO     | architecture information:
[2024-05-16 15:59:49] 2024-05-16 13:59:33,572 | INFO     | executing command: cat /etc/os-release
[2024-05-16 15:59:49] 2024-05-16 13:59:33,589 | INFO     | cat /etc/os-release:
[2024-05-16 15:59:49] NAME="CentOS Linux"
[2024-05-16 15:59:49] VERSION="7 (Core)"
[2024-05-16 15:59:49] ID="centos"
[2024-05-16 15:59:49] ID_LIKE="rhel fedora"
[2024-05-16 15:59:49] VERSION_ID="7"
[2024-05-16 15:59:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 15:59:49] ANSI_COLOR="0;31"
[2024-05-16 15:59:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 15:59:49] HOME_URL="https://www.centos.org/"
[2024-05-16 15:59:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 15:59:49] 
[2024-05-16 15:59:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 15:59:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 15:59:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 15:59:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 15:59:49] 
[2024-05-16 15:59:49] 2024-05-16 13:59:33,589 | INFO     | *************************************
[2024-05-16 15:59:49] 2024-05-16 13:59:34,091 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2024-05-16 15:59:49] 2024-05-16 13:59:34,111 | INFO     | sufficient remaining disk space (3067855503360 B)
[2024-05-16 15:59:49] 2024-05-16 13:59:34,112 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 15:59:49] 2024-05-16 13:59:34,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 15:59:49] 2024-05-16 13:59:34,112 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 15:59:49] 2024-05-16 13:59:34,225 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 15:59:49] 2024-05-16 13:59:34,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 15:59:49] 2024-05-16 13:59:34,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 15:59:49] 2024-05-16 13:59:34,527 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 15:59:49] 2024-05-16 13:59:34,527 | INFO     | aborting loop
[2024-05-16 15:59:49] 2024-05-16 13:59:34,693 | INFO     | all data control threads have been joined
[2024-05-16 15:59:49] 2024-05-16 13:59:34,767 | INFO     | all job control threads have been joined
[2024-05-16 15:59:49] 2024-05-16 13:59:35,117 | INFO     | [job] retrieve thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,251 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,384 | INFO     | all payload control threads have been joined
[2024-05-16 15:59:49] 2024-05-16 13:59:35,480 | INFO     | [job] validate thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,532 | INFO     | [job] job monitor thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,601 | INFO     | [payload] failed_post thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,698 | INFO     | [data] control thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,772 | INFO     | [job] control thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,774 | INFO     | [payload] validate_post thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:35,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 15:59:49] 2024-05-16 13:59:35,915 | INFO     | [data] copytool_in thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,071 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,118 | INFO     | [data] copytool_out thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,135 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,199 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,386 | INFO     | [payload] control thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:36,853 | INFO     | [job] queue monitor thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:37,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 15:59:49] 2024-05-16 13:59:41,440 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 15:59:49] 2024-05-16 13:59:43,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47383434396736)>', '<ExcThread(monitor, started 47383609841408)>']
[2024-05-16 15:59:49] 2024-05-16 13:59:44,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 15:59:49] 2024-05-16 13:59:44,270 | INFO     | [monitor] control thread has ended
[2024-05-16 15:59:49] 2024-05-16 13:59:48,333 | INFO     | all workflow threads have been joined
[2024-05-16 15:59:49] 2024-05-16 13:59:48,333 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 15:59:49] 2024-05-16 13:59:48,333 | INFO     | traces error code: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:48,334 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 15:59:49] 2024-05-16 13:59:48,422 [wrapper] ==== pilot stdout END ====
[2024-05-16 15:59:49] 2024-05-16 13:59:48,425 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 15:59:49] 2024-05-16 13:59:48,428 [wrapper] pilotpid: 2681590
[2024-05-16 15:59:49] 2024-05-16 13:59:48,430 [wrapper] Pilot exit status: 0
[2024-05-16 15:59:49] 2024-05-16 13:59:48,444 [wrapper] pandaids: 6205899552
[2024-05-16 15:59:49] 2024-05-16 13:59:48,539 [wrapper] cleanup: SIGTERM to supervisor_pilot 4079708 2681591
[2024-05-16 15:59:49] 2024-05-16 13:59:48,542 [wrapper] Test setup, not cleaning
[2024-05-16 15:59:49] 2024-05-16 13:59:48,545 [wrapper] ==== wrapper stdout END ====
[2024-05-16 15:59:49] 2024-05-16 13:59:48,547 [wrapper] ==== wrapper stderr END ====
[2024-05-16 15:59:49] 2024-05-16 13:59:48,552 [wrapper] apfmon messages muted
[2024-05-16 15:59:49]  *** Error codes and diagnostics ***
[2024-05-16 15:59:49]     "exeErrorCode": 0,
[2024-05-16 15:59:49]     "exeErrorDiag": "",
[2024-05-16 15:59:49]     "pilotErrorCode": 0,
[2024-05-16 15:59:49]     "pilotErrorDiag": "",
[2024-05-16 15:59:49]  *** Listing of results directory ***
[2024-05-16 15:59:49] total 878768
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc    467845 May 13 20:48 pilot3.tar.gz
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc      5633 May 13 20:54 queuedata.json
[2024-05-16 15:59:49] -rwx------ 1 boinc boinc     32251 May 13 20:54 runpilot2-wrapper.sh
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc       100 May 16 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 15:59:49] -rwxr-xr-x 1 boinc boinc      7986 May 16 12:04 run_atlas
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc       105 May 16 12:04 job.xml
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc     17537 May 16 12:04 start_atlas.sh
[2024-05-16 15:59:49] drwxrwx--x 2 boinc boinc      4096 May 16 12:04 shared
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc    480002 May 16 12:04 input.tar.gz
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc      6644 May 16 12:04 init_data.xml
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc 616875843 May 16 12:04 EVNT.38776140._000311.pool.root.1
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc         0 May 16 12:04 boinc_lockfile
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc      2613 May 16 12:04 pandaJob.out
[2024-05-16 15:59:49] -rw------- 1 boinc boinc       424 May 16 12:04 setup.sh.local
[2024-05-16 15:59:49] -rw------- 1 boinc boinc   1010326 May 16 12:05 agis_schedconf.cvmfs.json
[2024-05-16 15:59:49] -rw------- 1 boinc boinc   1324701 May 16 12:05 cric_ddmendpoints.json
[2024-05-16 15:59:49] drwx------ 4 boinc boinc      4096 May 16 12:05 pilot3
[2024-05-16 15:59:49] -rw------- 1 boinc boinc 275810444 May 16 15:58 HITS.38776146._007769.pool.root.1
[2024-05-16 15:59:49] -rw------- 1 boinc boinc        95 May 16 15:58 pilot_heartbeat.json
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc       532 May 16 15:59 boinc_task_state.xml
[2024-05-16 15:59:49] -rw------- 1 boinc boinc      1041 May 16 15:59 memory_monitor_summary.json
[2024-05-16 15:59:49] -rw------- 1 boinc boinc         0 May 16 15:59 agis_ddmendpoints.agis.ALL.json
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc      8192 May 16 15:59 boinc_mmap_file
[2024-05-16 15:59:49] -rw------- 1 boinc boinc    335308 May 16 15:59 log.38776146._007769.job.log.tgz.1
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc        28 May 16 15:59 wrapper_checkpoint.txt
[2024-05-16 15:59:49] -rw------- 1 boinc boinc      7722 May 16 15:59 heartbeat.json
[2024-05-16 15:59:49] -rw------- 1 boinc boinc      4222 May 16 15:59 pilotlog.txt
[2024-05-16 15:59:49] -rw------- 1 boinc boinc   1489414 May 16 15:59 log.38776146._007769.job.log.1
[2024-05-16 15:59:49] -rw------- 1 boinc boinc       357 May 16 15:59 output.list
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc       620 May 16 15:59 runtime_log
[2024-05-16 15:59:49] -rw------- 1 boinc boinc   1843200 May 16 15:59 result.tar.gz
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc     11410 May 16 15:59 runtime_log.err
[2024-05-16 15:59:49] -rw------- 1 boinc boinc       659 May 16 15:59 kiQODmI0pQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmkNHKDmALwlKn.diag
[2024-05-16 15:59:49] -rw-r--r-- 1 boinc boinc     21422 May 16 15:59 stderr.txt
[2024-05-16 15:59:49] HITS file was successfully produced:
[2024-05-16 15:59:49] -rw------- 1 boinc boinc 275810444 May 16 15:58 shared/HITS.pool.root.1
[2024-05-16 15:59:49]  *** Contents of shared directory: ***
[2024-05-16 15:59:49] total 874068
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc     17537 May 16 12:04 start_atlas.sh
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc    480002 May 16 12:04 input.tar.gz
[2024-05-16 15:59:49] -rw-r--r-- 2 boinc boinc 616875843 May 16 12:04 ATLAS.root_0
[2024-05-16 15:59:49] -rw------- 1 boinc boinc 275810444 May 16 15:58 HITS.pool.root.1
[2024-05-16 15:59:49] -rw------- 1 boinc boinc   1843200 May 16 15:59 result.tar.gz
15:59:50 (2671986): run_atlas exited; CPU time 52980.770061
15:59:50 (2671986): called boinc_finish(0)

</stderr_txt>
]]>

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