Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:04:36 (3984368): wrapper (7.7.26015): starting
13:04:36 (3984368): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 13:04:36] Arguments: --nthreads 4
[2024-05-17 13:04:36] Threads: 4
[2024-05-17 13:04:36] Checking for CVMFS
[2024-05-17 13:04:36] No cvmfs_config command found, will try listing directly
[2024-05-17 13:04:36] CVMFS is ok
[2024-05-17 13:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 13:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 13:04:36] Further information can be found at the LHC@home message board.
[2024-05-17 13:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 13:04:36] Checking for apptainer binary...
[2024-05-17 13:04:36] which: no apptainer in ((null))
[2024-05-17 13:04:36] apptainer is not installed, using version from CVMFS
[2024-05-17 13:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 13:04:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2024-05-17 13:04:36] apptainer works
[2024-05-17 13:04:36] Set ATHENA_PROC_NUMBER=4
[2024-05-17 13:04:36] Set ATHENA_CORE_NUMBER=4
[2024-05-17 13:04:36] Starting ATLAS job with PandaID=6205893673
[2024-05-17 13:04:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 17:52:09]  *** The last 200 lines of the pilot log: ***
[2024-05-17 17:52:09] 2024-05-17 15:51:55,249 | INFO     | -- intersect: -2533899810.282635
[2024-05-17 17:52:09] 2024-05-17 15:51:55,249 | INFO     | intersect: -2533899810.282635
[2024-05-17 17:52:09] 2024-05-17 15:51:55,249 | INFO     | chi2: 0.03318748734010328
[2024-05-17 17:52:09] 2024-05-17 15:51:55,249 | INFO     | current chi2=0.03318748734010328 (change=61.55964424948414 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,250 | INFO     | model: linear, x: [1715945131.0, 1715945192.0, 1715945253.0, 1715945314.0, 1715945375.0, 1715945436.0, 1715945497.0, 1715945558.0, 1715945619.0, 1715945680.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,250 | INFO     | sum of square deviations: 5576683165.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | sum of deviations: 13696792868.000002
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | mean x: 1715953091.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | mean y: 2358326.13740458
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | -- intersect: -4212163705.6826506
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | intersect: -4212163705.6826506
[2024-05-17 17:52:09] 2024-05-17 15:51:55,251 | INFO     | chi2: 0.015741846195212114
[2024-05-17 17:52:09] 2024-05-17 15:51:55,252 | INFO     | current chi2=0.015741846195212114 (change=52.566923690574505 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,252 | INFO     | model: linear, x: [1715945436.0, 1715945497.0, 1715945558.0, 1715945619.0, 1715945680.0, 1715945741.0, 1715945802.0, 1715945863.0, 1715945924.0, 1715945985.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,252 | INFO     | sum of square deviations: 5263458688.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | sum of deviations: 16097318121.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | mean x: 1715953244.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | mean y: 2357174.319066148
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | -- intersect: -5245569500.284661
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | intersect: -5245569500.284661
[2024-05-17 17:52:09] 2024-05-17 15:51:55,253 | INFO     | chi2: 0.0013734130318940867
[2024-05-17 17:52:09] 2024-05-17 15:51:55,254 | INFO     | current chi2=0.0013734130318940867 (change=91.27540051616175 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,254 | INFO     | model: linear, x: [1715945741.0, 1715945802.0, 1715945863.0, 1715945924.0, 1715945985.0, 1715946046.0, 1715946107.0, 1715946168.0, 1715946229.0, 1715946290.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,254 | INFO     | sum of square deviations: 4962187923.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | sum of deviations: 14226683703.000002
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | mean x: 1715953396.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | mean y: 2358119.603174603
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | -- intersect: -4917311711.5093565
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | intersect: -4917311711.5093565
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | chi2: 0.0007340194791322876
[2024-05-17 17:52:09] 2024-05-17 15:51:55,255 | INFO     | current chi2=0.0007340194791322876 (change=46.555081240200956 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,256 | INFO     | model: linear, x: [1715946046.0, 1715946107.0, 1715946168.0, 1715946229.0, 1715946290.0, 1715946351.0, 1715946412.0, 1715946473.0, 1715946534.0, 1715946595.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,256 | INFO     | sum of square deviations: 4672638308.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | sum of deviations: 12858447785.999998
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | mean x: 1715953549.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | mean y: 2358840.2874493925
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | -- intersect: -4719705582.12705
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | intersect: -4719705582.12705
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | chi2: 0.0005404081615749505
[2024-05-17 17:52:09] 2024-05-17 15:51:55,257 | INFO     | current chi2=0.0005404081615749505 (change=26.37686370206584 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,258 | INFO     | model: linear, x: [1715946351.0, 1715946412.0, 1715946473.0, 1715946534.0, 1715946595.0, 1715946656.0, 1715946717.0, 1715946778.0, 1715946839.0, 1715946900.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,258 | INFO     | sum of square deviations: 4394577280.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | sum of deviations: 11786682696.500004
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | mean x: 1715953701.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | mean y: 2359427.541322314
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | -- intersect: -4599994908.383339
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | intersect: -4599994908.383339
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | chi2: 0.0004689117049887089
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | current chi2=0.0004689117049887089 (change=13.230084530528618 %)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,259 | INFO     | left removable region: 80
[2024-05-17 17:52:09] 2024-05-17 15:51:55,260 | INFO     | model: linear, x: [1715948791.0, 1715948852.0, 1715948913.0, 1715948974.0, 1715949035.0, 1715949096.0, 1715949157.0, 1715949218.0, 1715949279.0, 1715949340.0, 1715
[2024-05-17 17:52:09] 2024-05-17 15:51:55,260 | INFO     | sum of square deviations: 2334722845.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,260 | INFO     | sum of deviations: 5430810907.0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,260 | INFO     | mean x: 1715954738.5
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | mean y: 2362946.5714285714
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | -- intersect: -3989128261.7840247
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | intersect: -3989128261.7840247
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | chi2: 0.00015041869253314445
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | -- intersect: -3989128261.7840247
[2024-05-17 17:52:09] 2024-05-17 15:51:55,261 | INFO     | current memory leak: 2.33 B/s (using 196 data points, chi2=0.00)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | ..............................
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . Timing measurements:
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . get job = 0 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . initial setup = 1 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . payload setup = 4 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . stage-in = 0 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . payload execution = 17198 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . stage-out = 0 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | . log creation = 0 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,262 | INFO     | ..............................
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | 
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | job summary report
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | --------------------------------------------------
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | PanDA job id: 6205893673
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | task id: 38776146
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | errors: (none)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,576 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 17:52:09] 2024-05-17 15:51:55,578 | INFO     | pilot state: finished 
[2024-05-17 17:52:09] 2024-05-17 15:51:55,578 | INFO     | transexitcode: 0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,578 | INFO     | exeerrorcode: 0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | exeerrordiag: 
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | exitcode: 0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | exitmsg: OK
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | cpuconsumptiontime: 65876 s
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | nevents: 400
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | neventsw: 0
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | pid: 3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | pgrp: 3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | corecount: 4
[2024-05-17 17:52:09] 2024-05-17 15:51:55,579 | INFO     | event service: False
[2024-05-17 17:52:09] 2024-05-17 15:51:55,580 | INFO     | sizes: {0: 2392193, 1: 2392193, 4: 2392427, 11: 2392455, 17206: 2424510, 17207: 2424509, 17208: 2433675, 17210: 2433731, 17214: 2433901}
[2024-05-17 17:52:09] 2024-05-17 15:51:55,580 | INFO     | --------------------------------------------------
[2024-05-17 17:52:09] 2024-05-17 15:51:55,580 | INFO     | 
[2024-05-17 17:52:09] 2024-05-17 15:51:55,580 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-17 17:52:09] 2024-05-17 15:51:55,597 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,598 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,598 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,598 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,599 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 17:52:09] 2024-05-17 15:51:55,600 | INFO     | job 6205893673 has completed (purged errors)
[2024-05-17 17:52:09] 2024-05-17 15:51:55,601 | INFO     | overall cleanup function is called
[2024-05-17 17:52:09] 2024-05-17 15:51:56,608 | INFO     | --- collectZombieJob: --- 10, [3995978]
[2024-05-17 17:52:09] 2024-05-17 15:51:56,609 | INFO     | zombie collector waiting for pid 3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:56,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 17:52:09] 2024-05-17 15:51:57,614 | INFO     | collected zombie processes
[2024-05-17 17:52:09] 2024-05-17 15:51:57,614 | INFO     | will now attempt to kill all subprocesses of pid=3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:57,726 | INFO     | process IDs to be killed: [3995978] (in reverse order)
[2024-05-17 17:52:09] 2024-05-17 15:51:57,787 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 17:52:09] 2024-05-17 15:51:57,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 17:52:09] 2024-05-17 15:51:57,792 | INFO     | did not find any defunct processes belonging to 3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:57,796 | INFO     | did not find any defunct processes belonging to 3995978
[2024-05-17 17:52:09] 2024-05-17 15:51:57,796 | INFO     | ready for new job
[2024-05-17 17:52:09] 2024-05-17 15:51:57,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 17:52:09] 2024-05-17 15:51:57,798 | INFO     | *************************************
[2024-05-17 17:52:09] 2024-05-17 15:51:57,798 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 17:52:09] 2024-05-17 15:51:57,798 | INFO     | *************************************
[2024-05-17 17:52:09] 2024-05-17 15:51:57,798 | INFO     | 
[2024-05-17 17:52:09] 2024-05-17 15:51:57,800 | INFO     | architecture information:
[2024-05-17 17:52:09] 2024-05-17 15:51:57,800 | INFO     | executing command: cat /etc/os-release
[2024-05-17 17:52:09] 2024-05-17 15:51:57,810 | INFO     | cat /etc/os-release:
[2024-05-17 17:52:09] NAME="CentOS Linux"
[2024-05-17 17:52:09] VERSION="7 (Core)"
[2024-05-17 17:52:09] ID="centos"
[2024-05-17 17:52:09] ID_LIKE="rhel fedora"
[2024-05-17 17:52:09] VERSION_ID="7"
[2024-05-17 17:52:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 17:52:09] ANSI_COLOR="0;31"
[2024-05-17 17:52:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 17:52:09] HOME_URL="https://www.centos.org/"
[2024-05-17 17:52:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 17:52:09] 
[2024-05-17 17:52:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 17:52:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 17:52:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 17:52:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 17:52:09] 
[2024-05-17 17:52:09] 2024-05-17 15:51:57,811 | INFO     | *************************************
[2024-05-17 17:52:09] 2024-05-17 15:51:58,313 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-17 17:52:09] 2024-05-17 15:51:58,328 | INFO     | sufficient remaining disk space (1609760243712 B)
[2024-05-17 17:52:09] 2024-05-17 15:51:58,328 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 17:52:09] 2024-05-17 15:51:58,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 17:52:09] 2024-05-17 15:51:58,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 17:52:09] 2024-05-17 15:51:58,329 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 17:52:09] 2024-05-17 15:51:58,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:52:09] 2024-05-17 15:51:58,330 | INFO     | aborting loop
[2024-05-17 17:52:09] 2024-05-17 15:51:58,655 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 17:52:09] 2024-05-17 15:51:58,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 17:52:09] 2024-05-17 15:51:58,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 17:52:09] 2024-05-17 15:51:58,920 | INFO     | all payload control threads have been joined
[2024-05-17 17:52:09] 2024-05-17 15:51:59,087 | INFO     | all data control threads have been joined
[2024-05-17 17:52:09] 2024-05-17 15:51:59,334 | INFO     | [job] retrieve thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:51:59,335 | INFO     | [job] job monitor thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:51:59,555 | INFO     | [job] validate thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:51:59,607 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:51:59,625 | INFO     | all job control threads have been joined
[2024-05-17 17:52:09] 2024-05-17 15:51:59,709 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:51:59,925 | INFO     | [payload] control thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,030 | INFO     | [payload] failed_post thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,091 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,092 | INFO     | [data] control thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,299 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,332 | INFO     | [data] copytool_out thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,333 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 17:52:09] 2024-05-17 15:52:00,630 | INFO     | [job] control thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,640 | INFO     | [data] copytool_in thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:00,734 | INFO     | [payload] validate_post thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:01,333 | INFO     | [job] queue monitor thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:02,335 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 17:52:09] 2024-05-17 15:52:03,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47470661755968)>', '<ExcThread(monitor, started 47470839310080)>']
[2024-05-17 17:52:09] 2024-05-17 15:52:03,679 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 17:52:09] 2024-05-17 15:52:03,679 | INFO     | [monitor] control thread has ended
[2024-05-17 17:52:09] 2024-05-17 15:52:08,369 | INFO     | all workflow threads have been joined
[2024-05-17 17:52:09] 2024-05-17 15:52:08,369 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 17:52:09] 2024-05-17 15:52:08,369 | INFO     | traces error code: 0
[2024-05-17 17:52:09] 2024-05-17 15:52:08,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 17:52:09] 2024-05-17 15:52:08,461 [wrapper] ==== pilot stdout END ====
[2024-05-17 17:52:09] 2024-05-17 15:52:08,464 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 17:52:09] 2024-05-17 15:52:08,466 [wrapper] pilotpid: 3988567
[2024-05-17 17:52:09] 2024-05-17 15:52:08,468 [wrapper] Pilot exit status: 0
[2024-05-17 17:52:09] 2024-05-17 15:52:08,476 [wrapper] pandaids: 6205893673
[2024-05-17 17:52:09] 2024-05-17 15:52:08,534 [wrapper] cleanup: SIGTERM to supervisor_pilot  242232 3988568
[2024-05-17 17:52:09] 2024-05-17 15:52:08,536 [wrapper] Test setup, not cleaning
[2024-05-17 17:52:09] 2024-05-17 15:52:08,538 [wrapper] ==== wrapper stdout END ====
[2024-05-17 17:52:09] 2024-05-17 15:52:08,540 [wrapper] ==== wrapper stderr END ====
[2024-05-17 17:52:09] 2024-05-17 15:52:08,543 [wrapper] apfmon messages muted
[2024-05-17 17:52:09]  *** Error codes and diagnostics ***
[2024-05-17 17:52:09]     "exeErrorCode": 0,
[2024-05-17 17:52:09]     "exeErrorDiag": "",
[2024-05-17 17:52:09]     "pilotErrorCode": 0,
[2024-05-17 17:52:09]     "pilotErrorDiag": "",
[2024-05-17 17:52:09]  *** Listing of results directory ***
[2024-05-17 17:52:09] total 872004
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc    467845 May 13 20:26 pilot3.tar.gz
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc      5633 May 13 20:37 queuedata.json
[2024-05-17 17:52:09] -rwx------ 1 boinc boinc     32251 May 13 20:38 runpilot2-wrapper.sh
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc       100 May 17 13:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 17:52:09] -rwxr-xr-x 1 boinc boinc      7986 May 17 13:04 run_atlas
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc       105 May 17 13:04 job.xml
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc 614856140 May 17 13:04 EVNT.38776140._000303.pool.root.1
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc      6457 May 17 13:04 init_data.xml
[2024-05-17 17:52:09] drwxrwx--x 2 boinc boinc      4096 May 17 13:04 shared
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc    479996 May 17 13:04 input.tar.gz
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc     17537 May 17 13:04 start_atlas.sh
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc         0 May 17 13:04 boinc_lockfile
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc      2621 May 17 13:04 pandaJob.out
[2024-05-17 17:52:09] -rw------- 1 boinc boinc       424 May 17 13:04 setup.sh.local
[2024-05-17 17:52:09] -rw------- 1 boinc boinc   1019392 May 17 13:04 agis_schedconf.cvmfs.json
[2024-05-17 17:52:09] -rw------- 1 boinc boinc   1324701 May 17 13:04 cric_ddmendpoints.json
[2024-05-17 17:52:09] drwx------ 4 boinc boinc      4096 May 17 13:04 pilot3
[2024-05-17 17:52:09] -rw------- 1 boinc boinc 269728429 May 17 17:51 HITS.38776146._007571.pool.root.1
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc       531 May 17 17:51 boinc_task_state.xml
[2024-05-17 17:52:09] -rw------- 1 boinc boinc        95 May 17 17:51 pilot_heartbeat.json
[2024-05-17 17:52:09] -rw------- 1 boinc boinc      1052 May 17 17:51 memory_monitor_summary.json
[2024-05-17 17:52:09] -rw------- 1 boinc boinc         0 May 17 17:51 agis_ddmendpoints.agis.ALL.json
[2024-05-17 17:52:09] -rw------- 1 boinc boinc    378278 May 17 17:51 log.38776146._007571.job.log.tgz.1
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc      8192 May 17 17:51 boinc_mmap_file
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc        28 May 17 17:51 wrapper_checkpoint.txt
[2024-05-17 17:52:09] -rw------- 1 boinc boinc      7771 May 17 17:51 heartbeat.json
[2024-05-17 17:52:09] -rw------- 1 boinc boinc      4222 May 17 17:52 pilotlog.txt
[2024-05-17 17:52:09] -rw------- 1 boinc boinc   2027438 May 17 17:52 log.38776146._007571.job.log.1
[2024-05-17 17:52:09] -rw------- 1 boinc boinc       357 May 17 17:52 output.list
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc       620 May 17 17:52 runtime_log
[2024-05-17 17:52:09] -rw------- 1 boinc boinc   2426880 May 17 17:52 result.tar.gz
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc     11410 May 17 17:52 runtime_log.err
[2024-05-17 17:52:09] -rw------- 1 boinc boinc       658 May 17 17:52 6vMKDmZkpQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmqLHKDmVHLvXo.diag
[2024-05-17 17:52:09] -rw-r--r-- 1 boinc boinc     21388 May 17 17:52 stderr.txt
[2024-05-17 17:52:09] HITS file was successfully produced:
[2024-05-17 17:52:09] -rw------- 1 boinc boinc 269728429 May 17 17:51 shared/HITS.pool.root.1
[2024-05-17 17:52:09]  *** Contents of shared directory: ***
[2024-05-17 17:52:09] total 866728
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc 614856140 May 17 13:04 ATLAS.root_0
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc    479996 May 17 13:04 input.tar.gz
[2024-05-17 17:52:09] -rw-r--r-- 2 boinc boinc     17537 May 17 13:04 start_atlas.sh
[2024-05-17 17:52:09] -rw------- 1 boinc boinc 269728429 May 17 17:51 HITS.pool.root.1
[2024-05-17 17:52:09] -rw------- 1 boinc boinc   2426880 May 17 17:52 result.tar.gz
17:52:10 (3984368): run_atlas exited; CPU time 65532.993536
17:52:10 (3984368): called boinc_finish(0)

</stderr_txt>
]]>

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