Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:40:44 (3717665): wrapper (7.7.26015): starting
16:40:44 (3717665): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 16:40:44] Arguments: --nthreads 4
[2024-05-16 16:40:44] Threads: 4
[2024-05-16 16:40:44] Checking for CVMFS
[2024-05-16 16:40:44] No cvmfs_config command found, will try listing directly
[2024-05-16 16:40:44] CVMFS is ok
[2024-05-16 16:40:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 16:40:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 16:40:44] Further information can be found at the LHC@home message board.
[2024-05-16 16:40:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 16:40:44] Checking for apptainer binary...
[2024-05-16 16:40:44] which: no apptainer in ((null))
[2024-05-16 16:40:44] apptainer is not installed, using version from CVMFS
[2024-05-16 16:40:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 16:40:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-16 16:40:45] apptainer works
[2024-05-16 16:40:45] Set ATHENA_PROC_NUMBER=4
[2024-05-16 16:40:45] Set ATHENA_CORE_NUMBER=4
[2024-05-16 16:40:45] Starting ATLAS job with PandaID=6205892228
[2024-05-16 16:40:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 21:41:11]  *** The last 200 lines of the pilot log: ***
[2024-05-16 21:41:11] 2024-05-16 19:40:50,295 | INFO     | sum of square deviations: 7562532492.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,296 | INFO     | sum of deviations: 140377267510.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,296 | INFO     | mean x: 1715879297.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,296 | INFO     | mean y: 2298779.3689655173
[2024-05-16 21:41:11] 2024-05-16 19:40:50,296 | INFO     | -- intersect: -31848202015.14201
[2024-05-16 21:41:11] 2024-05-16 19:40:50,296 | INFO     | intersect: -31848202015.14201
[2024-05-16 21:41:11] 2024-05-16 19:40:50,297 | INFO     | chi2: 4.430580457015362
[2024-05-16 21:41:11] 2024-05-16 19:40:50,297 | INFO     | current chi2=4.430580457015362 (change=15.037932653045106 %)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,297 | INFO     | right removable region: 289
[2024-05-16 21:41:11] 2024-05-16 19:40:50,297 | INFO     | model: linear, x: [1715870788.0, 1715870849.0, 1715870910.0, 1715870971.0, 1715871032.0, 1715871093.0, 1715871154.0, 1715871215.0, 1715871276.0, 1715871337.0, 1715
[2024-05-16 21:41:11] 2024-05-16 19:40:50,297 | INFO     | sum of square deviations: 7562532492.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,298 | INFO     | sum of deviations: 56644757654.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | mean x: 1715879602.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | mean y: 2318612.1551724137
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | -- intersect: -12849934828.647123
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | intersect: -12849934828.647123
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | chi2: 2.7897958269155376
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | current chi2=2.7897958269155376 (change=46.50208404288328 %)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | model: linear, x: [1715871093.0, 1715871154.0, 1715871215.0, 1715871276.0, 1715871337.0, 1715871398.0, 1715871459.0, 1715871520.0, 1715871581.0, 1715871642.0, 1715
[2024-05-16 21:41:11] 2024-05-16 19:40:50,299 | INFO     | sum of square deviations: 7178069470.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | sum of deviations: 3440825231.000004
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | mean x: 1715879755.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | mean y: 2339716.7263157894
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | -- intersect: -820171458.3245027
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | intersect: -820171458.3245027
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | chi2: 1.4134864774752602
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | current chi2=1.4134864774752602 (change=49.33369446472922 %)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | model: linear, x: [1715871398.0, 1715871459.0, 1715871520.0, 1715871581.0, 1715871642.0, 1715871703.0, 1715871764.0, 1715871825.0, 1715871886.0, 1715871947.0, 1715
[2024-05-16 21:41:11] 2024-05-16 19:40:50,301 | INFO     | sum of square deviations: 6806862510.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | sum of deviations: -22799728744.999992
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | mean x: 1715879907.5
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | mean y: 2350412.342857143
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | -- intersect: 5749726151.535756
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | intersect: 5749726151.535756
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | chi2: 0.8362921089299947
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | current chi2=0.8362921089299947 (change=40.83479946523704 %)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | model: linear, x: [1715871703.0, 1715871764.0, 1715871825.0, 1715871886.0, 1715871947.0, 1715872008.0, 1715872069.0, 1715872130.0, 1715872191.0, 1715872252.0, 1715
[2024-05-16 21:41:11] 2024-05-16 19:40:50,303 | INFO     | sum of square deviations: 6448679050.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,304 | INFO     | sum of deviations: -20069960079.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | mean x: 1715880060.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | mean y: 2349247.72
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | -- intersect: 5342612584.99248
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | intersect: 5342612584.99248
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | chi2: 0.8340114250776566
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | current chi2=0.8340114250776566 (change=0.27271378361517745 %)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | left removable region: 40
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | model: linear, x: [1715872923.0, 1715872984.0, 1715873045.0, 1715873106.0, 1715873167.0, 1715873228.0, 1715873289.0, 1715873350.0, 1715873411.0, 1715873472.0, 1715
[2024-05-16 21:41:11] 2024-05-16 19:40:50,305 | INFO     | sum of square deviations: 4787066500.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,306 | INFO     | sum of deviations: 5375606944.000004
[2024-05-16 21:41:11] 2024-05-16 19:40:50,306 | INFO     | mean x: 1715880487.0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,306 | INFO     | mean y: 2352818.248995984
[2024-05-16 21:41:11] 2024-05-16 19:40:50,306 | INFO     | -- intersect: -1924484642.8540213
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | intersect: -1924484642.8540213
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | chi2: 0.0003560422926533905
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | -- intersect: -1924484642.8540213
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | current memory leak: 1.12 B/s (using 249 data points, chi2=0.00)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | ..............................
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | . Timing measurements:
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | . get job = 0 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | . initial setup = 1 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | . payload setup = 5 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,307 | INFO     | . stage-in = 0 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,308 | INFO     | . payload execution = 17963 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,308 | INFO     | . stage-out = 0 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,308 | INFO     | . log creation = 0 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,308 | INFO     | ..............................
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | 
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | job summary report
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | --------------------------------------------------
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | PanDA job id: 6205892228
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | task id: 38776146
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | errors: (none)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | pilot state: finished 
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | transexitcode: 0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | exeerrorcode: 0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | exeerrordiag: 
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | exitcode: 0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,363 | INFO     | exitmsg: OK
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | cpuconsumptiontime: 68150 s
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | nevents: 400
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | neventsw: 0
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | pid: 3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | pgrp: 3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | corecount: 4
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | event service: False
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | sizes: {0: 2392135, 4: 2392341, 11: 2392369, 17973: 2424617, 17974: 2433655, 17978: 2433769}
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | --------------------------------------------------
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | 
[2024-05-16 21:41:11] 2024-05-16 19:40:50,364 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/1
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,381 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | job 6205892228 has completed (purged errors)
[2024-05-16 21:41:11] 2024-05-16 19:40:50,382 | INFO     | overall cleanup function is called
[2024-05-16 21:41:11] 2024-05-16 19:40:51,389 | INFO     | --- collectZombieJob: --- 10, [3729538]
[2024-05-16 21:41:11] 2024-05-16 19:40:51,389 | INFO     | zombie collector waiting for pid 3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:51,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 21:41:11] 2024-05-16 19:40:52,394 | INFO     | collected zombie processes
[2024-05-16 21:41:11] 2024-05-16 19:40:52,394 | INFO     | will now attempt to kill all subprocesses of pid=3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:52,544 | INFO     | process IDs to be killed: [3729538] (in reverse order)
[2024-05-16 21:41:11] 2024-05-16 19:40:52,647 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 21:41:11] 2024-05-16 19:40:52,648 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 21:41:11] 2024-05-16 19:40:52,655 | INFO     | did not find any defunct processes belonging to 3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:52,662 | INFO     | did not find any defunct processes belonging to 3729538
[2024-05-16 21:41:11] 2024-05-16 19:40:52,662 | INFO     | ready for new job
[2024-05-16 21:41:11] 2024-05-16 19:40:52,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 21:41:11] 2024-05-16 19:40:52,663 | INFO     | *************************************
[2024-05-16 21:41:11] 2024-05-16 19:40:52,664 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 21:41:11] 2024-05-16 19:40:52,664 | INFO     | *************************************
[2024-05-16 21:41:11] 2024-05-16 19:40:52,664 | INFO     | 
[2024-05-16 21:41:11] 2024-05-16 19:40:52,666 | INFO     | architecture information:
[2024-05-16 21:41:11] 2024-05-16 19:40:52,667 | INFO     | executing command: cat /etc/os-release
[2024-05-16 21:41:11] 2024-05-16 19:40:52,680 | INFO     | cat /etc/os-release:
[2024-05-16 21:41:11] NAME="CentOS Linux"
[2024-05-16 21:41:11] VERSION="7 (Core)"
[2024-05-16 21:41:11] ID="centos"
[2024-05-16 21:41:11] ID_LIKE="rhel fedora"
[2024-05-16 21:41:11] VERSION_ID="7"
[2024-05-16 21:41:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 21:41:11] ANSI_COLOR="0;31"
[2024-05-16 21:41:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 21:41:11] HOME_URL="https://www.centos.org/"
[2024-05-16 21:41:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 21:41:11] 
[2024-05-16 21:41:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 21:41:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 21:41:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 21:41:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 21:41:11] 
[2024-05-16 21:41:11] 2024-05-16 19:40:52,680 | INFO     | *************************************
[2024-05-16 21:41:11] 2024-05-16 19:40:53,182 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/1
[2024-05-16 21:41:11] 2024-05-16 19:40:53,201 | INFO     | sufficient remaining disk space (549823971328 B)
[2024-05-16 21:41:11] 2024-05-16 19:40:53,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 21:41:11] 2024-05-16 19:40:53,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 21:41:11] 2024-05-16 19:40:53,202 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 21:41:11] 2024-05-16 19:40:53,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 21:41:11] 2024-05-16 19:40:53,203 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 21:41:11] 2024-05-16 19:40:53,203 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 21:41:11] 2024-05-16 19:40:53,203 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 21:41:11] 2024-05-16 19:40:53,566 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 21:41:11] 2024-05-16 19:40:53,566 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 21:41:11] 2024-05-16 19:40:53,566 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:41:11] 2024-05-16 19:40:53,566 | INFO     | will abort loop
[2024-05-16 21:41:11] 2024-05-16 19:40:54,177 | INFO     | all data control threads have been joined
[2024-05-16 21:41:11] 2024-05-16 19:40:54,207 | INFO     | [job] retrieve thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:54,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 21:41:11] 2024-05-16 19:40:54,372 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:54,386 | INFO     | all payload control threads have been joined
[2024-05-16 21:41:11] 2024-05-16 19:40:54,491 | INFO     | all job control threads have been joined
[2024-05-16 21:41:11] 2024-05-16 19:40:54,572 | INFO     | [job] job monitor thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:54,577 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:54,587 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:54,692 | INFO     | [data] copytool_in thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,182 | INFO     | [data] control thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,195 | INFO     | [payload] failed_post thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,340 | INFO     | [payload] validate_post thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:41:11] 2024-05-16 19:40:55,391 | INFO     | [payload] control thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,460 | INFO     | [job] validate thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:55,496 | INFO     | [job] control thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:56,343 | INFO     | [data] copytool_out thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:56,375 | INFO     | [job] queue monitor thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:40:57,209 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:41:04,189 | INFO     | job.realtimelogging is not enabled
[2024-05-16 21:41:11] 2024-05-16 19:41:05,194 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 21:41:11] 2024-05-16 19:41:05,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47991755801664)>', '<ExcThread(monitor, started 47991931254528)>']
[2024-05-16 21:41:11] 2024-05-16 19:41:06,266 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 21:41:11] 2024-05-16 19:41:06,266 | INFO     | [monitor] control thread has ended
[2024-05-16 21:41:11] 2024-05-16 19:41:10,453 | INFO     | all workflow threads have been joined
[2024-05-16 21:41:11] 2024-05-16 19:41:10,453 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 21:41:11] 2024-05-16 19:41:10,453 | INFO     | traces error code: 0
[2024-05-16 21:41:11] 2024-05-16 19:41:10,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 21:41:11] 2024-05-16 19:41:10,529 [wrapper] ==== pilot stdout END ====
[2024-05-16 21:41:11] 2024-05-16 19:41:10,532 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 21:41:11] 2024-05-16 19:41:10,533 [wrapper] pilotpid: 3722024
[2024-05-16 21:41:11] 2024-05-16 19:41:10,535 [wrapper] Pilot exit status: 0
[2024-05-16 21:41:11] 2024-05-16 19:41:10,551 [wrapper] pandaids: 6205892228
[2024-05-16 21:41:11] 2024-05-16 19:41:10,616 [wrapper] cleanup: SIGTERM to supervisor_pilot  260723 3722025
[2024-05-16 21:41:11] 2024-05-16 19:41:10,619 [wrapper] Test setup, not cleaning
[2024-05-16 21:41:11] 2024-05-16 19:41:10,621 [wrapper] ==== wrapper stdout END ====
[2024-05-16 21:41:11] 2024-05-16 19:41:10,623 [wrapper] ==== wrapper stderr END ====
[2024-05-16 21:41:11] 2024-05-16 19:41:10,627 [wrapper] apfmon messages muted
[2024-05-16 21:41:11]  *** Error codes and diagnostics ***
[2024-05-16 21:41:11]     "exeErrorCode": 0,
[2024-05-16 21:41:11]     "exeErrorDiag": "",
[2024-05-16 21:41:11]     "pilotErrorCode": 0,
[2024-05-16 21:41:11]     "pilotErrorDiag": "",
[2024-05-16 21:41:11]  *** Listing of results directory ***
[2024-05-16 21:41:11] total 885476
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc    467845 May 13 19:54 pilot3.tar.gz
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc      5633 May 13 20:12 queuedata.json
[2024-05-16 21:41:11] -rwx------ 1 boinc boinc     32251 May 13 20:13 runpilot2-wrapper.sh
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc       100 May 16 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 21:41:11] -rwxr-xr-x 1 boinc boinc      7986 May 16 16:40 run_atlas
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc       105 May 16 16:40 job.xml
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc 617382114 May 16 16:40 EVNT.38776140._000292.pool.root.1
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc      6663 May 16 16:40 init_data.xml
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc     17537 May 16 16:40 start_atlas.sh
[2024-05-16 21:41:11] drwxrwx--x 2 boinc boinc      4096 May 16 16:40 shared
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc    479999 May 16 16:40 input.tar.gz
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc         0 May 16 16:40 boinc_lockfile
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc      2613 May 16 16:40 pandaJob.out
[2024-05-16 21:41:11] -rw------- 1 boinc boinc       424 May 16 16:40 setup.sh.local
[2024-05-16 21:41:11] -rw------- 1 boinc boinc   1018974 May 16 16:40 agis_schedconf.cvmfs.json
[2024-05-16 21:41:11] -rw------- 1 boinc boinc   1324701 May 16 16:40 cric_ddmendpoints.json
[2024-05-16 21:41:11] drwx------ 4 boinc boinc      4096 May 16 16:40 pilot3
[2024-05-16 21:41:11] -rw------- 1 boinc boinc 281155916 May 16 21:40 HITS.38776146._007308.pool.root.1
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc       531 May 16 21:40 boinc_task_state.xml
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc      8192 May 16 21:40 boinc_mmap_file
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc        28 May 16 21:40 wrapper_checkpoint.txt
[2024-05-16 21:41:11] -rw------- 1 boinc boinc      1055 May 16 21:40 memory_monitor_summary.json
[2024-05-16 21:41:11] -rw------- 1 boinc boinc         0 May 16 21:40 agis_ddmendpoints.agis.ALL.json
[2024-05-16 21:41:11] -rw------- 1 boinc boinc    394352 May 16 21:40 log.38776146._007308.job.log.tgz.1
[2024-05-16 21:41:11] -rw------- 1 boinc boinc      7779 May 16 21:40 heartbeat.json
[2024-05-16 21:41:11] -rw------- 1 boinc boinc        95 May 16 21:40 pilot_heartbeat.json
[2024-05-16 21:41:11] -rw------- 1 boinc boinc      4602 May 16 21:41 pilotlog.txt
[2024-05-16 21:41:11] -rw------- 1 boinc boinc   1933226 May 16 21:41 log.38776146._007308.job.log.1
[2024-05-16 21:41:11] -rw------- 1 boinc boinc       357 May 16 21:41 output.list
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc       620 May 16 21:41 runtime_log
[2024-05-16 21:41:11] -rw------- 1 boinc boinc   2344960 May 16 21:41 result.tar.gz
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc     11410 May 16 21:41 runtime_log.err
[2024-05-16 21:41:11] -rw------- 1 boinc boinc       659 May 16 21:41 rK0KDmDMpQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmuELKDmqRPS0n.diag
[2024-05-16 21:41:11] -rw-r--r-- 1 boinc boinc     21244 May 16 21:41 stderr.txt
[2024-05-16 21:41:11] HITS file was successfully produced:
[2024-05-16 21:41:11] -rw------- 1 boinc boinc 281155916 May 16 21:40 shared/HITS.pool.root.1
[2024-05-16 21:41:11]  *** Contents of shared directory: ***
[2024-05-16 21:41:11] total 880276
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc 617382114 May 16 16:40 ATLAS.root_0
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc     17537 May 16 16:40 start_atlas.sh
[2024-05-16 21:41:11] -rw-r--r-- 2 boinc boinc    479999 May 16 16:40 input.tar.gz
[2024-05-16 21:41:11] -rw------- 1 boinc boinc 281155916 May 16 21:40 HITS.pool.root.1
[2024-05-16 21:41:11] -rw------- 1 boinc boinc   2344960 May 16 21:41 result.tar.gz
21:41:12 (3717665): run_atlas exited; CPU time 67778.298961
21:41:12 (3717665): called boinc_finish(0)

</stderr_txt>
]]>

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