Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:54:44 (4047059): wrapper (7.7.26015): starting
17:54:44 (4047059): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 17:54:44] Arguments: --nthreads 4
[2024-05-16 17:54:44] Threads: 4
[2024-05-16 17:54:44] Checking for CVMFS
[2024-05-16 17:54:44] No cvmfs_config command found, will try listing directly
[2024-05-16 17:54:44] CVMFS is ok
[2024-05-16 17:54:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 17:54:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 17:54:44] Further information can be found at the LHC@home message board.
[2024-05-16 17:54:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 17:54:44] Checking for apptainer binary...
[2024-05-16 17:54:44] which: no apptainer in ((null))
[2024-05-16 17:54:44] apptainer is not installed, using version from CVMFS
[2024-05-16 17:54:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 17:54:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-16 17:54:45] apptainer works
[2024-05-16 17:54:45] Set ATHENA_PROC_NUMBER=4
[2024-05-16 17:54:45] Set ATHENA_CORE_NUMBER=4
[2024-05-16 17:54:45] Starting ATLAS job with PandaID=6205866037
[2024-05-16 17:54:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 23:00:57]  *** The last 200 lines of the pilot log: ***
[2024-05-16 23:00:57] 2024-05-16 21:00:36,586 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 23:00:57] 2024-05-16 21:00:36,589 | INFO     | fitting pss+swap vs Time
[2024-05-16 23:00:57] 2024-05-16 21:00:36,590 | INFO     | model: linear, x: [1715874918.0, 1715874979.0, 1715875040.0, 1715875101.0, 1715875162.0, 1715875223.0, 1715875284.0, 1715875345.0, 1715875406.0, 1715875467.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,590 | INFO     | sum of square deviations: 8456158550.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,591 | INFO     | sum of deviations: 128681919321.00002
[2024-05-16 23:00:57] 2024-05-16 21:00:36,591 | INFO     | mean x: 1715884068.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,591 | INFO     | mean y: 2291352.7242524917
[2024-05-16 23:00:57] 2024-05-16 21:00:36,591 | INFO     | -- intersect: -26109240721.442608
[2024-05-16 23:00:57] 2024-05-16 21:00:36,591 | INFO     | intersect: -26109240721.442608
[2024-05-16 23:00:57] 2024-05-16 21:00:36,592 | INFO     | chi2: 4.826933700256671
[2024-05-16 23:00:57] 2024-05-16 21:00:36,592 | INFO     | model: linear, x: [1715874918.0, 1715874979.0, 1715875040.0, 1715875101.0, 1715875162.0, 1715875223.0, 1715875284.0, 1715875345.0, 1715875406.0, 1715875467.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,592 | INFO     | sum of square deviations: 8041713570.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,593 | INFO     | sum of deviations: 145010570944.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,593 | INFO     | mean x: 1715883915.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,593 | INFO     | mean y: 2297266.293918919
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | -- intersect: -30939031854.079018
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | intersect: -30939031854.079018
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | chi2: 4.0441453543191805
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | current chi2=4.0441453543191805 (change=16.217093387793284 %)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | right removable region: 295
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | model: linear, x: [1715875223.0, 1715875284.0, 1715875345.0, 1715875406.0, 1715875467.0, 1715875528.0, 1715875589.0, 1715875650.0, 1715875711.0, 1715875772.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,594 | INFO     | sum of square deviations: 8041713570.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | sum of deviations: 58724291787.99994
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | mean x: 1715884220.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | mean y: 2317045.331081081
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | -- intersect: -12527858863.317554
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | intersect: -12527858863.317554
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | chi2: 2.3776322670562724
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | current chi2=2.3776322670562724 (change=50.7423881349387 %)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | model: linear, x: [1715875528.0, 1715875589.0, 1715875650.0, 1715875711.0, 1715875772.0, 1715875833.0, 1715875894.0, 1715875955.0, 1715876016.0, 1715876077.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,596 | INFO     | sum of square deviations: 7641036290.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | sum of deviations: 1676739452.0000038
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | mean x: 1715884373.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | mean y: 2338759.7594501716
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | -- intersect: -374192762.1552808
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | intersect: -374192762.1552808
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | chi2: 0.8885185109040981
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | current chi2=0.8885185109040981 (change=62.63011218281599 %)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | model: linear, x: [1715875833.0, 1715875894.0, 1715875955.0, 1715876016.0, 1715876077.0, 1715876138.0, 1715876199.0, 1715876260.0, 1715876321.0, 1715876382.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,598 | INFO     | sum of square deviations: 7253894147.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | sum of deviations: -6512448541.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | mean x: 1715884525.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | mean y: 2341953.5
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | -- intersect: 1542839987.8318272
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | intersect: 1542839987.8318272
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | chi2: 0.8175669320495044
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | current chi2=0.8175669320495044 (change=7.985379931184329 %)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,600 | INFO     | left removable region: 30
[2024-05-16 23:00:57] 2024-05-16 21:00:36,601 | INFO     | model: linear, x: [1715876748.0, 1715876809.0, 1715876870.0, 1715876931.0, 1715876992.0, 1715877053.0, 1715877114.0, 1715877175.0, 1715877236.0, 1715877297.0, 1715
[2024-05-16 23:00:57] 2024-05-16 21:00:36,601 | INFO     | sum of square deviations: 5770452380.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | sum of deviations: 10066278316.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | mean x: 1715884800.0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | mean y: 2349506.0716981133
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | -- intersect: -2990929498.336964
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | intersect: -2990929498.336964
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | chi2: 0.0006335345522533778
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | -- intersect: -2990929498.336964
[2024-05-16 23:00:57] 2024-05-16 21:00:36,602 | INFO     | current memory leak: 1.74 B/s (using 265 data points, chi2=0.00)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | ..............................
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . Timing measurements:
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . get job = 0 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . initial setup = 1 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . payload setup = 5 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . stage-in = 0 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . payload execution = 18313 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . stage-out = 0 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | . log creation = 0 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,603 | INFO     | ..............................
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | 
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | job summary report
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | --------------------------------------------------
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | PanDA job id: 6205866037
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | task id: 38776146
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | errors: (none)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | pilot state: finished 
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | transexitcode: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,660 | INFO     | exeerrorcode: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | exeerrordiag: 
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | exitcode: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | exitmsg: OK
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | cpuconsumptiontime: 69948 s
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | nevents: 400
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | neventsw: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | pid: 4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | pgrp: 4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | corecount: 4
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | event service: False
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | sizes: {0: 2392135, 4: 2392341, 11: 2392369, 18322: 2424701, 18323: 2433739, 18328: 2433853}
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | --------------------------------------------------
[2024-05-16 23:00:57] 2024-05-16 21:00:36,661 | INFO     | 
[2024-05-16 23:00:57] 2024-05-16 21:00:36,662 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/1
[2024-05-16 23:00:57] 2024-05-16 21:00:36,681 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,681 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,681 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 23:00:57] 2024-05-16 21:00:36,682 | INFO     | job 6205866037 has completed (purged errors)
[2024-05-16 23:00:57] 2024-05-16 21:00:36,683 | INFO     | overall cleanup function is called
[2024-05-16 23:00:57] 2024-05-16 21:00:37,689 | INFO     | --- collectZombieJob: --- 10, [4060000]
[2024-05-16 23:00:57] 2024-05-16 21:00:37,690 | INFO     | zombie collector waiting for pid 4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:37,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 23:00:57] 2024-05-16 21:00:38,694 | INFO     | collected zombie processes
[2024-05-16 23:00:57] 2024-05-16 21:00:38,695 | INFO     | will now attempt to kill all subprocesses of pid=4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:38,851 | INFO     | process IDs to be killed: [4060000] (in reverse order)
[2024-05-16 23:00:57] 2024-05-16 21:00:38,947 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 23:00:57] 2024-05-16 21:00:38,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 23:00:57] 2024-05-16 21:00:38,954 | INFO     | did not find any defunct processes belonging to 4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:38,961 | INFO     | did not find any defunct processes belonging to 4060000
[2024-05-16 23:00:57] 2024-05-16 21:00:38,961 | INFO     | ready for new job
[2024-05-16 23:00:57] 2024-05-16 21:00:38,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 23:00:57] 2024-05-16 21:00:38,963 | INFO     | *************************************
[2024-05-16 23:00:57] 2024-05-16 21:00:38,963 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 23:00:57] 2024-05-16 21:00:38,963 | INFO     | *************************************
[2024-05-16 23:00:57] 2024-05-16 21:00:38,963 | INFO     | 
[2024-05-16 23:00:57] 2024-05-16 21:00:38,966 | INFO     | architecture information:
[2024-05-16 23:00:57] 2024-05-16 21:00:38,966 | INFO     | executing command: cat /etc/os-release
[2024-05-16 23:00:57] 2024-05-16 21:00:38,979 | INFO     | cat /etc/os-release:
[2024-05-16 23:00:57] NAME="CentOS Linux"
[2024-05-16 23:00:57] VERSION="7 (Core)"
[2024-05-16 23:00:57] ID="centos"
[2024-05-16 23:00:57] ID_LIKE="rhel fedora"
[2024-05-16 23:00:57] VERSION_ID="7"
[2024-05-16 23:00:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 23:00:57] ANSI_COLOR="0;31"
[2024-05-16 23:00:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 23:00:57] HOME_URL="https://www.centos.org/"
[2024-05-16 23:00:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 23:00:57] 
[2024-05-16 23:00:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 23:00:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 23:00:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 23:00:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 23:00:57] 
[2024-05-16 23:00:57] 2024-05-16 21:00:38,979 | INFO     | *************************************
[2024-05-16 23:00:57] 2024-05-16 21:00:39,482 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/1
[2024-05-16 23:00:57] 2024-05-16 21:00:39,503 | INFO     | sufficient remaining disk space (575719604224 B)
[2024-05-16 23:00:57] 2024-05-16 21:00:39,504 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 23:00:57] 2024-05-16 21:00:39,504 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 23:00:57] 2024-05-16 21:00:39,504 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 23:00:57] 2024-05-16 21:00:39,505 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 23:00:57] 2024-05-16 21:00:39,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 23:00:57] 2024-05-16 21:00:39,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 23:00:57] 2024-05-16 21:00:39,787 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 23:00:57] 2024-05-16 21:00:39,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:00:57] 2024-05-16 21:00:39,820 | INFO     | aborting loop
[2024-05-16 23:00:57] 2024-05-16 21:00:40,003 | INFO     | all job control threads have been joined
[2024-05-16 23:00:57] 2024-05-16 21:00:40,510 | INFO     | [job] retrieve thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:40,564 | INFO     | all data control threads have been joined
[2024-05-16 23:00:57] 2024-05-16 21:00:40,640 | INFO     | [job] validate thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:40,737 | INFO     | all payload control threads have been joined
[2024-05-16 23:00:57] 2024-05-16 21:00:40,822 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:40,824 | INFO     | [job] job monitor thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:40,867 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:40,945 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,008 | INFO     | [job] control thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,209 | INFO     | [payload] failed_post thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,492 | INFO     | [payload] validate_post thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,569 | INFO     | [data] control thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 23:00:57] 2024-05-16 21:00:41,743 | INFO     | [payload] control thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,791 | INFO     | [data] copytool_out thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:41,913 | INFO     | [data] copytool_in thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:42,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 23:00:57] 2024-05-16 21:00:42,675 | INFO     | [job] queue monitor thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:46,539 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:49,704 | INFO     | job.realtimelogging is not enabled
[2024-05-16 23:00:57] 2024-05-16 21:00:50,709 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 23:00:57] 2024-05-16 21:00:51,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47553777640512)>', '<ExcThread(monitor, started 47554217645824)>']
[2024-05-16 23:00:57] 2024-05-16 21:00:51,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 23:00:57] 2024-05-16 21:00:51,564 | INFO     | [monitor] control thread has ended
[2024-05-16 23:00:57] 2024-05-16 21:00:56,178 | INFO     | all workflow threads have been joined
[2024-05-16 23:00:57] 2024-05-16 21:00:56,178 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 23:00:57] 2024-05-16 21:00:56,179 | INFO     | traces error code: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:56,179 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 23:00:57] 2024-05-16 21:00:56,255 [wrapper] ==== pilot stdout END ====
[2024-05-16 23:00:57] 2024-05-16 21:00:56,257 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 23:00:57] 2024-05-16 21:00:56,259 [wrapper] pilotpid: 4051848
[2024-05-16 23:00:57] 2024-05-16 21:00:56,260 [wrapper] Pilot exit status: 0
[2024-05-16 23:00:57] 2024-05-16 21:00:56,267 [wrapper] pandaids: 6205866037
[2024-05-16 23:00:57] 2024-05-16 21:00:56,329 [wrapper] cleanup: SIGTERM to supervisor_pilot  686108 4051849
[2024-05-16 23:00:57] 2024-05-16 21:00:56,332 [wrapper] Test setup, not cleaning
[2024-05-16 23:00:57] 2024-05-16 21:00:56,334 [wrapper] ==== wrapper stdout END ====
[2024-05-16 23:00:57] 2024-05-16 21:00:56,336 [wrapper] ==== wrapper stderr END ====
[2024-05-16 23:00:57] 2024-05-16 21:00:56,340 [wrapper] apfmon messages muted
[2024-05-16 23:00:57]  *** Error codes and diagnostics ***
[2024-05-16 23:00:57]     "exeErrorCode": 0,
[2024-05-16 23:00:57]     "exeErrorDiag": "",
[2024-05-16 23:00:57]     "pilotErrorCode": 0,
[2024-05-16 23:00:57]     "pilotErrorDiag": "",
[2024-05-16 23:00:57]  *** Listing of results directory ***
[2024-05-16 23:00:57] total 879188
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc    467845 May 13 17:49 pilot3.tar.gz
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc      5633 May 13 18:07 queuedata.json
[2024-05-16 23:00:57] -rwx------ 1 boinc boinc     32251 May 13 18:07 runpilot2-wrapper.sh
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc       100 May 16 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 23:00:57] -rwxr-xr-x 1 boinc boinc      7986 May 16 17:54 run_atlas
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc       105 May 16 17:54 job.xml
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc 616565506 May 16 17:54 EVNT.38776140._000244.pool.root.1
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc      6663 May 16 17:54 init_data.xml
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc     17537 May 16 17:54 start_atlas.sh
[2024-05-16 23:00:57] drwxrwx--x 2 boinc boinc      4096 May 16 17:54 shared
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc    479999 May 16 17:54 input.tar.gz
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc         0 May 16 17:54 boinc_lockfile
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc      2613 May 16 17:54 pandaJob.out
[2024-05-16 23:00:57] -rw------- 1 boinc boinc       424 May 16 17:54 setup.sh.local
[2024-05-16 23:00:57] -rw------- 1 boinc boinc   1018966 May 16 17:54 agis_schedconf.cvmfs.json
[2024-05-16 23:00:57] -rw------- 1 boinc boinc   1324701 May 16 17:54 cric_ddmendpoints.json
[2024-05-16 23:00:57] drwx------ 4 boinc boinc      4096 May 16 17:54 pilot3
[2024-05-16 23:00:57] -rw------- 1 boinc boinc        95 May 16 22:59 pilot_heartbeat.json
[2024-05-16 23:00:57] -rw------- 1 boinc boinc 275124137 May 16 22:59 HITS.38776146._006094.pool.root.1
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc       531 May 16 23:00 boinc_task_state.xml
[2024-05-16 23:00:57] -rw------- 1 boinc boinc      1068 May 16 23:00 memory_monitor_summary.json
[2024-05-16 23:00:57] -rw------- 1 boinc boinc         0 May 16 23:00 agis_ddmendpoints.agis.ALL.json
[2024-05-16 23:00:57] -rw------- 1 boinc boinc    395337 May 16 23:00 log.38776146._006094.job.log.tgz.1
[2024-05-16 23:00:57] -rw------- 1 boinc boinc      7779 May 16 23:00 heartbeat.json
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc      8192 May 16 23:00 boinc_mmap_file
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc        28 May 16 23:00 wrapper_checkpoint.txt
[2024-05-16 23:00:57] -rw------- 1 boinc boinc      4416 May 16 23:00 pilotlog.txt
[2024-05-16 23:00:57] -rw------- 1 boinc boinc   2139758 May 16 23:00 log.38776146._006094.job.log.1
[2024-05-16 23:00:57] -rw------- 1 boinc boinc       357 May 16 23:00 output.list
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc       620 May 16 23:00 runtime_log
[2024-05-16 23:00:57] -rw------- 1 boinc boinc   2549760 May 16 23:00 result.tar.gz
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc     11410 May 16 23:00 runtime_log.err
[2024-05-16 23:00:57] -rw------- 1 boinc boinc       658 May 16 23:00 LEFMDmROnQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmbQXKDmb8SzHo.diag
[2024-05-16 23:00:57] -rw-r--r-- 1 boinc boinc     21305 May 16 23:00 stderr.txt
[2024-05-16 23:00:57] HITS file was successfully produced:
[2024-05-16 23:00:57] -rw------- 1 boinc boinc 275124137 May 16 22:59 shared/HITS.pool.root.1
[2024-05-16 23:00:57]  *** Contents of shared directory: ***
[2024-05-16 23:00:57] total 873784
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc 616565506 May 16 17:54 ATLAS.root_0
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc     17537 May 16 17:54 start_atlas.sh
[2024-05-16 23:00:57] -rw-r--r-- 2 boinc boinc    479999 May 16 17:54 input.tar.gz
[2024-05-16 23:00:57] -rw------- 1 boinc boinc 275124137 May 16 22:59 HITS.pool.root.1
[2024-05-16 23:00:57] -rw------- 1 boinc boinc   2549760 May 16 23:00 result.tar.gz
23:00:59 (4047059): run_atlas exited; CPU time 69531.938884
23:00:59 (4047059): called boinc_finish(0)

</stderr_txt>
]]>

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