Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:36 (2776277): wrapper (7.7.26015): starting
03:04:36 (2776277): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 03:04:36] Arguments: --nthreads 4
[2024-05-16 03:04:36] Threads: 4
[2024-05-16 03:04:36] Checking for CVMFS
[2024-05-16 03:04:36] No cvmfs_config command found, will try listing directly
[2024-05-16 03:04:36] CVMFS is ok
[2024-05-16 03:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 03:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 03:04:36] Further information can be found at the LHC@home message board.
[2024-05-16 03:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 03:04:36] Checking for apptainer binary...
[2024-05-16 03:04:36] which: no apptainer in ((null))
[2024-05-16 03:04:36] apptainer is not installed, using version from CVMFS
[2024-05-16 03:04:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 03:04:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-16 03:04:37] apptainer works
[2024-05-16 03:04:37] Set ATHENA_PROC_NUMBER=4
[2024-05-16 03:04:37] Set ATHENA_CORE_NUMBER=4
[2024-05-16 03:04:37] Starting ATLAS job with PandaID=6205842822
[2024-05-16 03:04:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 06:17:49]  *** The last 200 lines of the pilot log: ***
[2024-05-16 06:17:49] 2024-05-16 04:17:26,595 | INFO     | intersect: -38897326344.5098
[2024-05-16 06:17:49] 2024-05-16 04:17:26,596 | INFO     | chi2: 1.687320880609557
[2024-05-16 06:17:49] 2024-05-16 04:17:26,596 | INFO     | current chi2=1.687320880609557 (change=60.97532956795047 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,596 | INFO     | model: linear, x: [1715822135.0, 1715822196.0, 1715822257.0, 1715822318.0, 1715822379.0, 1715822440.0, 1715822501.0, 1715822562.0, 1715822623.0, 1715822684.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,596 | INFO     | sum of square deviations: 1778377530.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,597 | INFO     | sum of deviations: 7541714503.999998
[2024-05-16 06:17:49] 2024-05-16 04:17:26,597 | INFO     | mean x: 1715827564.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,597 | INFO     | mean y: 2342363.312849162
[2024-05-16 06:17:49] 2024-05-16 04:17:26,597 | INFO     | -- intersect: -7274111262.246504
[2024-05-16 06:17:49] 2024-05-16 04:17:26,597 | INFO     | intersect: -7274111262.246504
[2024-05-16 06:17:49] 2024-05-16 04:17:26,598 | INFO     | chi2: 0.08996936814094995
[2024-05-16 06:17:49] 2024-05-16 04:17:26,598 | INFO     | current chi2=0.08996936814094995 (change=94.66791591481712 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,598 | INFO     | model: linear, x: [1715822440.0, 1715822501.0, 1715822562.0, 1715822623.0, 1715822684.0, 1715822745.0, 1715822806.0, 1715822867.0, 1715822928.0, 1715822989.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,598 | INFO     | sum of square deviations: 1633472487.5
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | sum of deviations: 1621359870.0000002
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | mean x: 1715827716.5
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | mean y: 2348501.9195402297
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | -- intersect: -1700755911.932326
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | intersect: -1700755911.932326
[2024-05-16 06:17:49] 2024-05-16 04:17:26,599 | INFO     | chi2: 0.0005704501754625039
[2024-05-16 06:17:49] 2024-05-16 04:17:26,600 | INFO     | current chi2=0.0005704501754625039 (change=99.36595067048953 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,600 | INFO     | model: linear, x: [1715822745.0, 1715822806.0, 1715822867.0, 1715822928.0, 1715822989.0, 1715823050.0, 1715823111.0, 1715823172.0, 1715823233.0, 1715823294.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,600 | INFO     | sum of square deviations: 1496660620.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | sum of deviations: 992198794.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | mean x: 1715827869.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | mean y: 2349203.278106509
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | -- intersect: -1135144707.8888686
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | intersect: -1135144707.8888686
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | chi2: 0.0002152230274482198
[2024-05-16 06:17:49] 2024-05-16 04:17:26,601 | INFO     | current chi2=0.0002152230274482198 (change=62.27137150519352 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,602 | INFO     | model: linear, x: [1715823050.0, 1715823111.0, 1715823172.0, 1715823233.0, 1715823294.0, 1715823355.0, 1715823416.0, 1715823477.0, 1715823538.0, 1715823599.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,602 | INFO     | sum of square deviations: 1367709365.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,602 | INFO     | sum of deviations: 645203222.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | mean x: 1715828021.5
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | mean y: 2349611.6951219514
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | -- intersect: -807075106.8887749
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | intersect: -807075106.8887749
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | chi2: 9.538798049946442e-05
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | current chi2=9.538798049946442e-05 (change=55.679472763473846 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,603 | INFO     | model: linear, x: [1715823355.0, 1715823416.0, 1715823477.0, 1715823538.0, 1715823599.0, 1715823660.0, 1715823721.0, 1715823782.0, 1715823843.0, 1715823904.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,604 | INFO     | sum of square deviations: 1246386160.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,604 | INFO     | sum of deviations: 580731101.9999993
[2024-05-16 06:17:49] 2024-05-16 04:17:26,604 | INFO     | mean x: 1715828174.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,604 | INFO     | mean y: 2349692.672955975
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | -- intersect: -797109430.2762803
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | intersect: -797109430.2762803
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | chi2: 9.504247268392454e-05
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | current chi2=9.504247268392454e-05 (change=0.3622131569729729 %)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | left removable region: 60
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | model: linear, x: [1715825185.0, 1715825246.0, 1715825307.0, 1715825368.0, 1715825429.0, 1715825490.0, 1715825551.0, 1715825612.0, 1715825673.0, 1715825734.0, 1715
[2024-05-16 06:17:49] 2024-05-16 04:17:26,605 | INFO     | sum of square deviations: 576985702.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | sum of deviations: 528552068.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | mean x: 1715828906.0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | mean y: 2349384.3414634145
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | -- intersect: -1569448518.8940618
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | intersect: -1569448518.8940618
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | chi2: 2.3451013876793255e-05
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | -- intersect: -1569448518.8940618
[2024-05-16 06:17:49] 2024-05-16 04:17:26,606 | INFO     | current memory leak: 0.92 B/s (using 123 data points, chi2=0.00)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | ..............................
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . Timing measurements:
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . get job = 0 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . initial setup = 1 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . payload setup = 7 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . stage-in = 0 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . payload execution = 11516 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . stage-out = 0 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | . log creation = 0 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,607 | INFO     | ..............................
[2024-05-16 06:17:49] 2024-05-16 04:17:26,701 | INFO     | 
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | job summary report
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | --------------------------------------------------
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | PanDA job id: 6205842822
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | task id: 38776125
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | errors: (none)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | pilot state: finished 
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | transexitcode: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,702 | INFO     | exeerrorcode: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | exeerrordiag: 
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | exitcode: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | exitmsg: OK
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | cpuconsumptiontime: 43231 s
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | nevents: 400
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | neventsw: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | pid: 2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | pgrp: 2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | corecount: 4
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | event service: False
[2024-05-16 06:17:49] 2024-05-16 04:17:26,703 | INFO     | sizes: {0: 2392031, 1: 2392230, 10: 2392436, 12: 2392464, 11524: 2421572, 11527: 2430554, 11528: 2430738, 11536: 2430908}
[2024-05-16 06:17:49] 2024-05-16 04:17:26,704 | INFO     | --------------------------------------------------
[2024-05-16 06:17:49] 2024-05-16 04:17:26,704 | INFO     | 
[2024-05-16 06:17:49] 2024-05-16 04:17:26,704 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-16 06:17:49] 2024-05-16 04:17:26,734 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,734 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,734 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,734 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,734 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,736 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,736 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 06:17:49] 2024-05-16 04:17:26,736 | INFO     | job 6205842822 has completed (purged errors)
[2024-05-16 06:17:49] 2024-05-16 04:17:26,736 | INFO     | overall cleanup function is called
[2024-05-16 06:17:49] 2024-05-16 04:17:27,744 | INFO     | --- collectZombieJob: --- 10, [2789681]
[2024-05-16 06:17:49] 2024-05-16 04:17:27,744 | INFO     | zombie collector waiting for pid 2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:27,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 06:17:49] 2024-05-16 04:17:28,749 | INFO     | collected zombie processes
[2024-05-16 06:17:49] 2024-05-16 04:17:28,749 | INFO     | will now attempt to kill all subprocesses of pid=2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:28,951 | INFO     | process IDs to be killed: [2789681] (in reverse order)
[2024-05-16 06:17:49] 2024-05-16 04:17:29,106 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 06:17:49] 2024-05-16 04:17:29,106 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 06:17:49] 2024-05-16 04:17:29,122 | INFO     | did not find any defunct processes belonging to 2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:29,136 | INFO     | did not find any defunct processes belonging to 2789681
[2024-05-16 06:17:49] 2024-05-16 04:17:29,136 | INFO     | ready for new job
[2024-05-16 06:17:49] 2024-05-16 04:17:29,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 06:17:49] 2024-05-16 04:17:29,138 | INFO     | *************************************
[2024-05-16 06:17:49] 2024-05-16 04:17:29,138 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 06:17:49] 2024-05-16 04:17:29,138 | INFO     | *************************************
[2024-05-16 06:17:49] 2024-05-16 04:17:29,138 | INFO     | 
[2024-05-16 06:17:49] 2024-05-16 04:17:29,143 | INFO     | architecture information:
[2024-05-16 06:17:49] 2024-05-16 04:17:29,144 | INFO     | executing command: cat /etc/os-release
[2024-05-16 06:17:49] 2024-05-16 04:17:29,159 | INFO     | cat /etc/os-release:
[2024-05-16 06:17:49] NAME="CentOS Linux"
[2024-05-16 06:17:49] VERSION="7 (Core)"
[2024-05-16 06:17:49] ID="centos"
[2024-05-16 06:17:49] ID_LIKE="rhel fedora"
[2024-05-16 06:17:49] VERSION_ID="7"
[2024-05-16 06:17:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 06:17:49] ANSI_COLOR="0;31"
[2024-05-16 06:17:49] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 06:17:49] HOME_URL="https://www.centos.org/"
[2024-05-16 06:17:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 06:17:49] 
[2024-05-16 06:17:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 06:17:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 06:17:49] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 06:17:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 06:17:49] 
[2024-05-16 06:17:49] 2024-05-16 04:17:29,159 | INFO     | *************************************
[2024-05-16 06:17:49] 2024-05-16 04:17:29,661 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-16 06:17:49] 2024-05-16 04:17:29,691 | INFO     | sufficient remaining disk space (3015225376768 B)
[2024-05-16 06:17:49] 2024-05-16 04:17:29,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 06:17:49] 2024-05-16 04:17:29,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 06:17:49] 2024-05-16 04:17:29,742 | INFO     | all payload control threads have been joined
[2024-05-16 06:17:49] 2024-05-16 04:17:29,762 | INFO     | all job control threads have been joined
[2024-05-16 06:17:49] 2024-05-16 04:17:29,876 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 06:17:49] 2024-05-16 04:17:29,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 06:17:49] 2024-05-16 04:17:29,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 06:17:49] 2024-05-16 04:17:29,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 06:17:49] 2024-05-16 04:17:29,974 | INFO     | aborting loop
[2024-05-16 06:17:49] 2024-05-16 04:17:30,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 06:17:49] 2024-05-16 04:17:30,539 | INFO     | all data control threads have been joined
[2024-05-16 06:17:49] 2024-05-16 04:17:30,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 06:17:49] 2024-05-16 04:17:30,697 | INFO     | [job] retrieve thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:30,750 | INFO     | [payload] control thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:30,763 | INFO     | [payload] validate_post thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:30,765 | INFO     | [job] control thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:30,822 | INFO     | [data] copytool_in thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:30,978 | INFO     | [job] job monitor thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:31,300 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:31,483 | INFO     | [payload] failed_post thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:31,544 | INFO     | [data] control thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:31,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 06:17:49] 2024-05-16 04:17:31,972 | INFO     | [job] validate thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:31,992 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:32,115 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:32,693 | INFO     | [data] copytool_out thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:32,715 | INFO     | [job] queue monitor thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:34,057 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:40,688 | INFO     | job.realtimelogging is not enabled
[2024-05-16 06:17:49] 2024-05-16 04:17:41,693 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 06:17:49] 2024-05-16 04:17:43,207 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47725737497664)>', '<ExcThread(monitor, started 47725906646784)>']
[2024-05-16 06:17:49] 2024-05-16 04:17:43,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 06:17:49] 2024-05-16 04:17:43,944 | INFO     | [monitor] control thread has ended
[2024-05-16 06:17:49] 2024-05-16 04:17:48,232 | INFO     | all workflow threads have been joined
[2024-05-16 06:17:49] 2024-05-16 04:17:48,232 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 06:17:49] 2024-05-16 04:17:48,233 | INFO     | traces error code: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:48,233 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 06:17:49] 2024-05-16 04:17:48,294 [wrapper] ==== pilot stdout END ====
[2024-05-16 06:17:49] 2024-05-16 04:17:48,297 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 06:17:49] 2024-05-16 04:17:48,299 [wrapper] pilotpid: 2780983
[2024-05-16 06:17:49] 2024-05-16 04:17:48,302 [wrapper] Pilot exit status: 0
[2024-05-16 06:17:49] 2024-05-16 04:17:48,310 [wrapper] pandaids: 6205842822
[2024-05-16 06:17:49] 2024-05-16 04:17:48,434 [wrapper] cleanup: SIGTERM to supervisor_pilot 3842735 2780984
[2024-05-16 06:17:49] 2024-05-16 04:17:48,437 [wrapper] Test setup, not cleaning
[2024-05-16 06:17:49] 2024-05-16 04:17:48,439 [wrapper] ==== wrapper stdout END ====
[2024-05-16 06:17:49] 2024-05-16 04:17:48,441 [wrapper] ==== wrapper stderr END ====
[2024-05-16 06:17:49] 2024-05-16 04:17:48,446 [wrapper] apfmon messages muted
[2024-05-16 06:17:49]  *** Error codes and diagnostics ***
[2024-05-16 06:17:49]     "exeErrorCode": 0,
[2024-05-16 06:17:49]     "exeErrorDiag": "",
[2024-05-16 06:17:49]     "pilotErrorCode": 0,
[2024-05-16 06:17:49]     "pilotErrorDiag": "",
[2024-05-16 06:17:49]  *** Listing of results directory ***
[2024-05-16 06:17:49] total 836780
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc    467845 May 13 16:58 pilot3.tar.gz
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc      5633 May 13 17:06 queuedata.json
[2024-05-16 06:17:49] -rwx------ 1 boinc boinc     32251 May 13 17:07 runpilot2-wrapper.sh
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc       100 May 16 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 06:17:49] -rwxr-xr-x 1 boinc boinc      7986 May 16 03:04 run_atlas
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc       105 May 16 03:04 job.xml
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc 599385015 May 16 03:04 EVNT.38776119._000065.pool.root.1
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc     17537 May 16 03:04 start_atlas.sh
[2024-05-16 06:17:49] drwxrwx--x 2 boinc boinc      4096 May 16 03:04 shared
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc    480011 May 16 03:04 input.tar.gz
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc      6644 May 16 03:04 init_data.xml
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc         0 May 16 03:04 boinc_lockfile
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc      2631 May 16 03:04 pandaJob.out
[2024-05-16 06:17:49] -rw------- 1 boinc boinc       424 May 16 03:04 setup.sh.local
[2024-05-16 06:17:49] -rw------- 1 boinc boinc   1011347 May 16 03:04 agis_schedconf.cvmfs.json
[2024-05-16 06:17:49] -rw------- 1 boinc boinc   1324701 May 16 03:04 cric_ddmendpoints.json
[2024-05-16 06:17:49] drwx------ 4 boinc boinc      4096 May 16 03:04 pilot3
[2024-05-16 06:17:49] -rw------- 1 boinc boinc 250836191 May 16 06:16 HITS.38776125._006972.pool.root.1
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc       532 May 16 06:16 boinc_task_state.xml
[2024-05-16 06:17:49] -rw------- 1 boinc boinc      1043 May 16 06:17 memory_monitor_summary.json
[2024-05-16 06:17:49] -rw------- 1 boinc boinc         0 May 16 06:17 agis_ddmendpoints.agis.ALL.json
[2024-05-16 06:17:49] -rw------- 1 boinc boinc    319692 May 16 06:17 log.38776125._006972.job.log.tgz.1
[2024-05-16 06:17:49] -rw------- 1 boinc boinc      7717 May 16 06:17 heartbeat.json
[2024-05-16 06:17:49] -rw------- 1 boinc boinc        95 May 16 06:17 pilot_heartbeat.json
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc      8192 May 16 06:17 boinc_mmap_file
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc        28 May 16 06:17 wrapper_checkpoint.txt
[2024-05-16 06:17:49] -rw------- 1 boinc boinc      4294 May 16 06:17 pilotlog.txt
[2024-05-16 06:17:49] -rw------- 1 boinc boinc   1236011 May 16 06:17 log.38776125._006972.job.log.1
[2024-05-16 06:17:49] -rw------- 1 boinc boinc       357 May 16 06:17 output.list
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc       620 May 16 06:17 runtime_log
[2024-05-16 06:17:49] -rw------- 1 boinc boinc   1576960 May 16 06:17 result.tar.gz
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc     11410 May 16 06:17 runtime_log.err
[2024-05-16 06:17:49] -rw------- 1 boinc boinc       658 May 16 06:17 qr6NDmoRmQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmizKKDmrHk85m.diag
[2024-05-16 06:17:49] -rw-r--r-- 1 boinc boinc     21356 May 16 06:17 stderr.txt
[2024-05-16 06:17:49] HITS file was successfully produced:
[2024-05-16 06:17:49] -rw------- 1 boinc boinc 250836191 May 16 06:16 shared/HITS.pool.root.1
[2024-05-16 06:17:49]  *** Contents of shared directory: ***
[2024-05-16 06:17:49] total 832340
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc 599385015 May 16 03:04 ATLAS.root_0
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc     17537 May 16 03:04 start_atlas.sh
[2024-05-16 06:17:49] -rw-r--r-- 2 boinc boinc    480011 May 16 03:04 input.tar.gz
[2024-05-16 06:17:49] -rw------- 1 boinc boinc 250836191 May 16 06:16 HITS.pool.root.1
[2024-05-16 06:17:49] -rw------- 1 boinc boinc   1576960 May 16 06:17 result.tar.gz
06:17:50 (2776277): run_atlas exited; CPU time 42930.367402
06:17:50 (2776277): called boinc_finish(0)

</stderr_txt>
]]>

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