Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:13 (2061650): wrapper (7.7.26015): starting
22:43:13 (2061650): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 22:43:13] Arguments: --nthreads 4
[2024-05-19 22:43:13] Threads: 4
[2024-05-19 22:43:13] Checking for CVMFS
[2024-05-19 22:43:13] No cvmfs_config command found, will try listing directly
[2024-05-19 22:43:13] CVMFS is ok
[2024-05-19 22:43:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 22:43:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 22:43:13] Further information can be found at the LHC@home message board.
[2024-05-19 22:43:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 22:43:13] Checking for apptainer binary...
[2024-05-19 22:43:13] which: no apptainer in ((null))
[2024-05-19 22:43:13] apptainer is not installed, using version from CVMFS
[2024-05-19 22:43:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 22:43:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-19 22:43:14] apptainer works
[2024-05-19 22:43:14] Set ATHENA_PROC_NUMBER=4
[2024-05-19 22:43:14] Set ATHENA_CORE_NUMBER=4
[2024-05-19 22:43:14] Starting ATLAS job with PandaID=6205838983
[2024-05-19 22:43:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 00:56:50]  *** The last 200 lines of the pilot log: ***
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | chi2: 0.044859434309348065
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | current chi2=0.044859434309348065 (change=97.03995231894676 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | model: linear, x: [1716152343.0, 1716152404.0, 1716152465.0, 1716152526.0, 1716152587.0, 1716152648.0, 1716152709.0, 1716152770.0, 1716152831.0, 1716152892.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | sum of square deviations: 483971865.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | sum of deviations: -1340482686.0000002
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | mean x: 1716155850.5
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | mean y: 2357081.1896551726
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | -- intersect: 4755685467.485117
[2024-05-20 00:56:50] 2024-05-19 22:56:35,567 | INFO     | intersect: 4755685467.485117
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | chi2: 0.006756416905424987
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | current chi2=0.006756416905424987 (change=84.93869347786884 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | model: linear, x: [1716152648.0, 1716152709.0, 1716152770.0, 1716152831.0, 1716152892.0, 1716152953.0, 1716153014.0, 1716153075.0, 1716153136.0, 1716153197.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | sum of square deviations: 424045160.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | sum of deviations: -452379659.99999976
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | mean x: 1716156003.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | mean y: 2354810.6486486485
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | -- intersect: 1833183558.0964408
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | intersect: 1833183558.0964408
[2024-05-20 00:56:50] 2024-05-19 22:56:35,568 | INFO     | chi2: 0.004863896292861635
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | current chi2=0.004863896292861635 (change=28.010713948746634 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | model: linear, x: [1716152953.0, 1716153014.0, 1716153075.0, 1716153136.0, 1716153197.0, 1716153258.0, 1716153319.0, 1716153380.0, 1716153441.0, 1716153502.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | sum of square deviations: 369281342.5
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | sum of deviations: 428916680.99999994
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | mean x: 1716156155.5
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | mean y: 2352355.4716981133
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | -- intersect: -1990946296.7470498
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | intersect: -1990946296.7470498
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | chi2: 0.0023266926418089215
[2024-05-20 00:56:50] 2024-05-19 22:56:35,569 | INFO     | current chi2=0.0023266926418089215 (change=52.16401621836327 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | model: linear, x: [1716153258.0, 1716153319.0, 1716153380.0, 1716153441.0, 1716153502.0, 1716153563.0, 1716153624.0, 1716153685.0, 1716153746.0, 1716153807.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | sum of square deviations: 319447850.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | sum of deviations: 885411278.9999998
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | mean x: 1716156308.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | mean y: 2350996.2376237623
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | -- intersect: -4754306942.234015
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | intersect: -4754306942.234015
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | chi2: 0.0001384886372368616
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | current chi2=0.0001384886372368616 (change=94.04783275846904 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | model: linear, x: [1716153563.0, 1716153624.0, 1716153685.0, 1716153746.0, 1716153807.0, 1716153868.0, 1716153929.0, 1716153990.0, 1716154051.0, 1716154112.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,570 | INFO     | sum of square deviations: 274312120.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | sum of deviations: 680335806.0000001
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | mean x: 1716156460.5
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | mean y: 2351688.2708333335
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | -- intersect: -4253977520.8664618
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | intersect: -4253977520.8664618
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | chi2: 0.00010791715509513635
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | current chi2=0.00010791715509513635 (change=22.07508337990058 %)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | left removable region: 70
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | model: linear, x: [1716155698.0, 1716155759.0, 1716155820.0, 1716155881.0, 1716155942.0, 1716156003.0, 1716156064.0, 1716156125.0, 1716156186.0, 1716156247.0, 1716
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | sum of square deviations: 51573060.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | sum of deviations: 56363938.999999985
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | mean x: 1716157345.0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,571 | INFO     | mean y: 2354751.4
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | -- intersect: -1873225016.5637765
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | intersect: -1873225016.5637765
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | chi2: 1.6476195977380968e-06
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | -- intersect: -1873225016.5637765
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | current memory leak: 1.09 B/s (using 55 data points, chi2=0.00)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | ..............................
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . Timing measurements:
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . get job = 0 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . initial setup = 1 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . payload setup = 5 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . stage-in = 0 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . payload execution = 7961 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . stage-out = 0 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,572 | INFO     | . log creation = 0 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,573 | INFO     | ..............................
[2024-05-20 00:56:50] 2024-05-19 22:56:35,673 | INFO     | 
[2024-05-20 00:56:50] 2024-05-19 22:56:35,673 | INFO     | job summary report
[2024-05-20 00:56:50] 2024-05-19 22:56:35,673 | INFO     | --------------------------------------------------
[2024-05-20 00:56:50] 2024-05-19 22:56:35,673 | INFO     | PanDA job id: 6205838983
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | task id: 38776125
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | errors: (none)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | pilot state: finished 
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | transexitcode: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | exeerrorcode: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | exeerrordiag: 
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | exitcode: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | exitmsg: OK
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | cpuconsumptiontime: 29252 s
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | nevents: 400
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | neventsw: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,674 | INFO     | pid: 2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | pgrp: 2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | corecount: 4
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | event service: False
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | sizes: {0: 2392091, 1: 2392233, 4: 2392439, 11: 2392467, 7970: 2420168, 7971: 2429334, 7978: 2429448}
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | --------------------------------------------------
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | 
[2024-05-20 00:56:50] 2024-05-19 22:56:35,675 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-05-20 00:56:50] 2024-05-19 22:56:35,745 | WARNING  | process 2073983 is no longer using CPU - aborting
[2024-05-20 00:56:50] 2024-05-19 22:56:35,745 | INFO     | aborting job monitoring since job object (job id=6205838983) has expired
[2024-05-20 00:56:50] 2024-05-19 22:56:35,768 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | job 6205838983 has completed (purged errors)
[2024-05-20 00:56:50] 2024-05-19 22:56:35,770 | INFO     | overall cleanup function is called
[2024-05-20 00:56:50] 2024-05-19 22:56:36,778 | INFO     | --- collectZombieJob: --- 10, [2073983]
[2024-05-20 00:56:50] 2024-05-19 22:56:36,778 | INFO     | zombie collector waiting for pid 2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:36,778 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 00:56:50] 2024-05-19 22:56:37,783 | INFO     | collected zombie processes
[2024-05-20 00:56:50] 2024-05-19 22:56:37,784 | INFO     | will now attempt to kill all subprocesses of pid=2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:37,978 | INFO     | process IDs to be killed: [2073983] (in reverse order)
[2024-05-20 00:56:50] 2024-05-19 22:56:38,122 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 00:56:50] 2024-05-19 22:56:38,123 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 00:56:50] 2024-05-19 22:56:38,136 | INFO     | did not find any defunct processes belonging to 2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:38,144 | INFO     | did not find any defunct processes belonging to 2073983
[2024-05-20 00:56:50] 2024-05-19 22:56:38,144 | INFO     | ready for new job
[2024-05-20 00:56:50] 2024-05-19 22:56:38,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 00:56:50] 2024-05-19 22:56:38,146 | INFO     | *************************************
[2024-05-20 00:56:50] 2024-05-19 22:56:38,146 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 00:56:50] 2024-05-19 22:56:38,146 | INFO     | *************************************
[2024-05-20 00:56:50] 2024-05-19 22:56:38,146 | INFO     | 
[2024-05-20 00:56:50] 2024-05-19 22:56:38,151 | INFO     | architecture information:
[2024-05-20 00:56:50] 2024-05-19 22:56:38,151 | INFO     | executing command: cat /etc/os-release
[2024-05-20 00:56:50] 2024-05-19 22:56:38,169 | INFO     | cat /etc/os-release:
[2024-05-20 00:56:50] NAME="CentOS Linux"
[2024-05-20 00:56:50] VERSION="7 (Core)"
[2024-05-20 00:56:50] ID="centos"
[2024-05-20 00:56:50] ID_LIKE="rhel fedora"
[2024-05-20 00:56:50] VERSION_ID="7"
[2024-05-20 00:56:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 00:56:50] ANSI_COLOR="0;31"
[2024-05-20 00:56:50] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 00:56:50] HOME_URL="https://www.centos.org/"
[2024-05-20 00:56:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 00:56:50] 
[2024-05-20 00:56:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 00:56:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 00:56:50] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 00:56:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 00:56:50] 
[2024-05-20 00:56:50] 2024-05-19 22:56:38,169 | INFO     | *************************************
[2024-05-20 00:56:50] 2024-05-19 22:56:38,672 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-05-20 00:56:50] 2024-05-19 22:56:38,688 | INFO     | sufficient remaining disk space (3012961501184 B)
[2024-05-20 00:56:50] 2024-05-19 22:56:38,688 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 00:56:50] 2024-05-19 22:56:38,688 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 00:56:50] 2024-05-19 22:56:38,731 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 00:56:50] 2024-05-19 22:56:38,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 00:56:50] 2024-05-19 22:56:38,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 00:56:50] 2024-05-19 22:56:39,193 | INFO     | all data control threads have been joined
[2024-05-20 00:56:50] 2024-05-19 22:56:39,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 00:56:50] 2024-05-19 22:56:39,253 | INFO     | aborting loop
[2024-05-20 00:56:50] 2024-05-19 22:56:39,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 00:56:50] 2024-05-19 22:56:39,502 | INFO     | all job control threads have been joined
[2024-05-20 00:56:50] 2024-05-19 22:56:39,694 | INFO     | [job] retrieve thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:39,710 | INFO     | [job] validate thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:39,800 | INFO     | all payload control threads have been joined
[2024-05-20 00:56:50] 2024-05-19 22:56:39,853 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:39,974 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:39,985 | INFO     | [payload] validate_post thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,006 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 00:56:50] 2024-05-19 22:56:40,036 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,199 | INFO     | [data] control thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,258 | INFO     | [job] job monitor thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,367 | INFO     | [payload] failed_post thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,507 | INFO     | [job] control thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 00:56:50] 2024-05-19 22:56:40,717 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:40,805 | INFO     | [payload] control thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:41,043 | INFO     | [data] copytool_in thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:41,296 | INFO     | [data] copytool_out thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:41,689 | INFO     | [job] queue monitor thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:44,012 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 00:56:50] 2024-05-19 22:56:44,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47995857818688)>', '<ExcThread(monitor, started 47996037474048)>']
[2024-05-20 00:56:50] 2024-05-19 22:56:44,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 00:56:50] 2024-05-19 22:56:44,756 | INFO     | [monitor] control thread has ended
[2024-05-20 00:56:50] 2024-05-19 22:56:49,650 | INFO     | all workflow threads have been joined
[2024-05-20 00:56:50] 2024-05-19 22:56:49,651 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 00:56:50] 2024-05-19 22:56:49,651 | INFO     | traces error code: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:49,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 00:56:50] 2024-05-19 22:56:49,712 [wrapper] ==== pilot stdout END ====
[2024-05-20 00:56:50] 2024-05-19 22:56:49,714 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 00:56:50] 2024-05-19 22:56:49,717 [wrapper] pilotpid: 2066335
[2024-05-20 00:56:50] 2024-05-19 22:56:49,719 [wrapper] Pilot exit status: 0
[2024-05-20 00:56:50] 2024-05-19 22:56:49,726 [wrapper] pandaids: 6205838983
[2024-05-20 00:56:50] 2024-05-19 22:56:49,875 [wrapper] cleanup: SIGTERM to supervisor_pilot 2718107 2066336
[2024-05-20 00:56:50] 2024-05-19 22:56:49,877 [wrapper] Test setup, not cleaning
[2024-05-20 00:56:50] 2024-05-19 22:56:49,879 [wrapper] ==== wrapper stdout END ====
[2024-05-20 00:56:50] 2024-05-19 22:56:49,882 [wrapper] ==== wrapper stderr END ====
[2024-05-20 00:56:50] 2024-05-19 22:56:49,887 [wrapper] apfmon messages muted
[2024-05-20 00:56:50]  *** Error codes and diagnostics ***
[2024-05-20 00:56:50]     "exeErrorCode": 0,
[2024-05-20 00:56:50]     "exeErrorDiag": "",
[2024-05-20 00:56:50]     "pilotErrorCode": 0,
[2024-05-20 00:56:50]     "pilotErrorDiag": "",
[2024-05-20 00:56:50]  *** Listing of results directory ***
[2024-05-20 00:56:50] total 832852
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc    467845 May 13 16:29 pilot3.tar.gz
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc      5633 May 13 16:41 queuedata.json
[2024-05-20 00:56:50] -rwx------ 1 boinc boinc     32251 May 13 16:41 runpilot2-wrapper.sh
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc       100 May 19 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 00:56:50] -rwxr-xr-x 1 boinc boinc      7986 May 19 22:43 run_atlas
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc       105 May 19 22:43 job.xml
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc 599923796 May 19 22:43 EVNT.38776119._000285.pool.root.1
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc      6644 May 19 22:43 init_data.xml
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc     17537 May 19 22:43 start_atlas.sh
[2024-05-20 00:56:50] drwxrwx--x 2 boinc boinc      4096 May 19 22:43 shared
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc    480009 May 19 22:43 input.tar.gz
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc         0 May 19 22:43 boinc_lockfile
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc      2633 May 19 22:43 pandaJob.out
[2024-05-20 00:56:50] -rw------- 1 boinc boinc       424 May 19 22:43 setup.sh.local
[2024-05-20 00:56:50] -rw------- 1 boinc boinc   1013701 May 19 22:43 agis_schedconf.cvmfs.json
[2024-05-20 00:56:50] -rw------- 1 boinc boinc         0 May 19 22:43 agis_ddmendpoints.agis.ALL.json
[2024-05-20 00:56:50] -rw------- 1 boinc boinc   1324701 May 19 22:43 cric_ddmendpoints.json
[2024-05-20 00:56:50] drwx------ 4 boinc boinc      4096 May 19 22:43 pilot3
[2024-05-20 00:56:50] -rw------- 1 boinc boinc        95 May 20 00:55 pilot_heartbeat.json
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc       530 May 20 00:55 boinc_task_state.xml
[2024-05-20 00:56:50] -rw------- 1 boinc boinc 247134300 May 20 00:55 HITS.38776125._006836.pool.root.1
[2024-05-20 00:56:50] -rw------- 1 boinc boinc      1038 May 20 00:56 memory_monitor_summary.json
[2024-05-20 00:56:50] -rw------- 1 boinc boinc    277326 May 20 00:56 log.38776125._006836.job.log.tgz.1
[2024-05-20 00:56:50] -rw------- 1 boinc boinc      7710 May 20 00:56 heartbeat.json
[2024-05-20 00:56:50] -rw------- 1 boinc boinc      4222 May 20 00:56 pilotlog.txt
[2024-05-20 00:56:50] -rw------- 1 boinc boinc    848099 May 20 00:56 log.38776125._006836.job.log.1
[2024-05-20 00:56:50] -rw------- 1 boinc boinc       357 May 20 00:56 output.list
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc       620 May 20 00:56 runtime_log
[2024-05-20 00:56:50] -rw------- 1 boinc boinc   1146880 May 20 00:56 result.tar.gz
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc     11409 May 20 00:56 runtime_log.err
[2024-05-20 00:56:50] -rw------- 1 boinc boinc       655 May 20 00:56 CLCMDme2lQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmZwKKDmfX9o5m.diag
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc        27 May 20 00:56 wrapper_checkpoint.txt
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc      8192 May 20 00:56 boinc_mmap_file
[2024-05-20 00:56:50] -rw-r--r-- 1 boinc boinc     21411 May 20 00:56 stderr.txt
[2024-05-20 00:56:50] HITS file was successfully produced:
[2024-05-20 00:56:50] -rw------- 1 boinc boinc 247134300 May 20 00:55 shared/HITS.pool.root.1
[2024-05-20 00:56:50]  *** Contents of shared directory: ***
[2024-05-20 00:56:50] total 828828
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc 599923796 May 19 22:43 ATLAS.root_0
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc     17537 May 19 22:43 start_atlas.sh
[2024-05-20 00:56:50] -rw-r--r-- 2 boinc boinc    480009 May 19 22:43 input.tar.gz
[2024-05-20 00:56:50] -rw------- 1 boinc boinc 247134300 May 20 00:55 HITS.pool.root.1
[2024-05-20 00:56:50] -rw------- 1 boinc boinc   1146880 May 20 00:56 result.tar.gz
00:56:52 (2061650): run_atlas exited; CPU time 29091.997537
00:56:52 (2061650): called boinc_finish(0)

</stderr_txt>
]]>

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