Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:39:22 (3356383): wrapper (7.7.26015): starting
04:39:22 (3356383): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 04:39:22] Arguments: --nthreads 4
[2024-05-16 04:39:22] Threads: 4
[2024-05-16 04:39:22] Checking for CVMFS
[2024-05-16 04:39:22] No cvmfs_config command found, will try listing directly
[2024-05-16 04:39:22] CVMFS is ok
[2024-05-16 04:39:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 04:39:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 04:39:22] Further information can be found at the LHC@home message board.
[2024-05-16 04:39:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 04:39:22] Checking for apptainer binary...
[2024-05-16 04:39:22] which: no apptainer in ((null))
[2024-05-16 04:39:22] apptainer is not installed, using version from CVMFS
[2024-05-16 04:39:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 04:39:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2024-05-16 04:39:23] apptainer works
[2024-05-16 04:39:23] Set ATHENA_PROC_NUMBER=4
[2024-05-16 04:39:23] Set ATHENA_CORE_NUMBER=4
[2024-05-16 04:39:23] Starting ATLAS job with PandaID=6205838892
[2024-05-16 04:39:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 08:07:14]  *** The last 200 lines of the pilot log: ***
[2024-05-16 08:07:14] 2024-05-16 06:06:52,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-16 08:07:14] 2024-05-16 06:06:52,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 08:07:14] 2024-05-16 06:06:52,540 | INFO     | fitting pss+swap vs Time
[2024-05-16 08:07:14] 2024-05-16 06:06:52,540 | INFO     | model: linear, x: [1715827201.0, 1715827262.0, 1715827323.0, 1715827384.0, 1715827445.0, 1715827506.0, 1715827567.0, 1715827628.0, 1715827689.0, 1715827750.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,540 | INFO     | sum of square deviations: 2632440055.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,542 | INFO     | sum of deviations: 77831590676.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,542 | INFO     | mean x: 1715833392.5
[2024-05-16 08:07:14] 2024-05-16 06:06:52,542 | INFO     | mean y: 2259911.362745098
[2024-05-16 08:07:14] 2024-05-16 06:06:52,542 | INFO     | -- intersect: -50728635943.08148
[2024-05-16 08:07:14] 2024-05-16 06:06:52,542 | INFO     | intersect: -50728635943.08148
[2024-05-16 08:07:14] 2024-05-16 06:06:52,543 | INFO     | chi2: 4.924459123868517
[2024-05-16 08:07:14] 2024-05-16 06:06:52,543 | INFO     | model: linear, x: [1715827201.0, 1715827262.0, 1715827323.0, 1715827384.0, 1715827445.0, 1715827506.0, 1715827567.0, 1715827628.0, 1715827689.0, 1715827750.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,543 | INFO     | sum of square deviations: 2443580700.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,544 | INFO     | sum of deviations: 88616726907.99998
[2024-05-16 08:07:14] 2024-05-16 06:06:52,544 | INFO     | mean x: 1715833240.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,544 | INFO     | mean y: 2268411.8391959798
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | -- intersect: -62222615607.23527
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | intersect: -62222615607.23527
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | chi2: 4.127980285323678
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | current chi2=4.127980285323678 (change=16.173935421341216 %)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | right removable region: 198
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | model: linear, x: [1715827506.0, 1715827567.0, 1715827628.0, 1715827689.0, 1715827750.0, 1715827811.0, 1715827872.0, 1715827933.0, 1715827994.0, 1715828055.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,545 | INFO     | sum of square deviations: 2443580700.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,546 | INFO     | sum of deviations: 30948697151.000015
[2024-05-16 08:07:14] 2024-05-16 06:06:52,546 | INFO     | mean x: 1715833545.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | mean y: 2297665.9346733666
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | -- intersect: -21729259121.09174
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | intersect: -21729259121.09174
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | chi2: 2.417529330232467
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | current chi2=2.417529330232467 (change=50.90771860578825 %)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | model: linear, x: [1715827811.0, 1715827872.0, 1715827933.0, 1715827994.0, 1715828055.0, 1715828116.0, 1715828177.0, 1715828238.0, 1715828299.0, 1715828360.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,547 | INFO     | sum of square deviations: 2263977332.5
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | sum of deviations: -7004068739.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | mean x: 1715833697.5
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | mean y: 2329895.1030927836
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | -- intersect: 5310606170.427741
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | intersect: 5310606170.427741
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | chi2: 0.9125645350232574
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | current chi2=0.9125645350232574 (change=62.25218351599043 %)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | model: linear, x: [1715828116.0, 1715828177.0, 1715828238.0, 1715828299.0, 1715828360.0, 1715828421.0, 1715828482.0, 1715828543.0, 1715828604.0, 1715828665.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,548 | INFO     | sum of square deviations: 2093397390.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,549 | INFO     | sum of deviations: -12357449174.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,549 | INFO     | mean x: 1715833850.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,549 | INFO     | mean y: 2334611.4285714286
[2024-05-16 08:07:14] 2024-05-16 06:06:52,549 | INFO     | -- intersect: 10131003775.577927
[2024-05-16 08:07:14] 2024-05-16 06:06:52,549 | INFO     | intersect: 10131003775.577927
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | chi2: 0.840388255342212
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | current chi2=0.840388255342212 (change=7.909169917413675 %)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | left removable region: 30
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | model: linear, x: [1715829031.0, 1715829092.0, 1715829153.0, 1715829214.0, 1715829275.0, 1715829336.0, 1715829397.0, 1715829458.0, 1715829519.0, 1715829580.0, 1715
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | sum of square deviations: 1470248962.0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,550 | INFO     | sum of deviations: 1464729895.5
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | mean x: 1715834124.5
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | mean y: 2343997.0654761903
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | -- intersect: -1707049175.6768005
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | intersect: -1707049175.6768005
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | chi2: 0.0004698030261368404
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | -- intersect: -1707049175.6768005
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | current memory leak: 1.00 B/s (using 168 data points, chi2=0.00)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | ..............................
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | . Timing measurements:
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | . get job = 0 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | . initial setup = 1 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,551 | INFO     | . payload setup = 6 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,552 | INFO     | . stage-in = 0 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,552 | INFO     | . payload execution = 12403 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,552 | INFO     | . stage-out = 0 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,552 | INFO     | . log creation = 0 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,552 | INFO     | ..............................
[2024-05-16 08:07:14] 2024-05-16 06:06:52,621 | INFO     | 
[2024-05-16 08:07:14] 2024-05-16 06:06:52,621 | INFO     | job summary report
[2024-05-16 08:07:14] 2024-05-16 06:06:52,621 | INFO     | --------------------------------------------------
[2024-05-16 08:07:14] 2024-05-16 06:06:52,621 | INFO     | PanDA job id: 6205838892
[2024-05-16 08:07:14] 2024-05-16 06:06:52,621 | INFO     | task id: 38776125
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | errors: (none)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | pilot state: finished 
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | transexitcode: 0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | exeerrorcode: 0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | exeerrordiag: 
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | exitcode: 0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | exitmsg: OK
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | cpuconsumptiontime: 46771 s
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | nevents: 400
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | neventsw: 0
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | pid: 3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:52,622 | INFO     | pgrp: 3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | corecount: 4
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | event service: False
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | sizes: {0: 2392205, 5: 2392411, 11: 2392467, 12413: 2422221, 12414: 2422220, 12415: 2431258, 12417: 2431442, 12423: 2431612}
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | --------------------------------------------------
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | 
[2024-05-16 08:07:14] 2024-05-16 06:06:52,623 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/1
[2024-05-16 08:07:14] 2024-05-16 06:06:52,642 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,643 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,643 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,643 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | job 6205838892 has completed (purged errors)
[2024-05-16 08:07:14] 2024-05-16 06:06:52,645 | INFO     | overall cleanup function is called
[2024-05-16 08:07:14] 2024-05-16 06:06:53,654 | INFO     | --- collectZombieJob: --- 10, [3370901]
[2024-05-16 08:07:14] 2024-05-16 06:06:53,654 | INFO     | zombie collector waiting for pid 3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:53,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 08:07:14] 2024-05-16 06:06:54,659 | INFO     | collected zombie processes
[2024-05-16 08:07:14] 2024-05-16 06:06:54,659 | INFO     | will now attempt to kill all subprocesses of pid=3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:54,983 | INFO     | process IDs to be killed: [3370901] (in reverse order)
[2024-05-16 08:07:14] 2024-05-16 06:06:55,135 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 08:07:14] 2024-05-16 06:06:55,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 08:07:14] 2024-05-16 06:06:55,149 | INFO     | did not find any defunct processes belonging to 3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:55,159 | INFO     | did not find any defunct processes belonging to 3370901
[2024-05-16 08:07:14] 2024-05-16 06:06:55,160 | INFO     | ready for new job
[2024-05-16 08:07:14] 2024-05-16 06:06:55,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 08:07:14] 2024-05-16 06:06:55,161 | INFO     | *************************************
[2024-05-16 08:07:14] 2024-05-16 06:06:55,161 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 08:07:14] 2024-05-16 06:06:55,161 | INFO     | *************************************
[2024-05-16 08:07:14] 2024-05-16 06:06:55,161 | INFO     | 
[2024-05-16 08:07:14] 2024-05-16 06:06:55,166 | INFO     | architecture information:
[2024-05-16 08:07:14] 2024-05-16 06:06:55,166 | INFO     | executing command: cat /etc/os-release
[2024-05-16 08:07:14] 2024-05-16 06:06:55,179 | INFO     | cat /etc/os-release:
[2024-05-16 08:07:14] NAME="CentOS Linux"
[2024-05-16 08:07:14] VERSION="7 (Core)"
[2024-05-16 08:07:14] ID="centos"
[2024-05-16 08:07:14] ID_LIKE="rhel fedora"
[2024-05-16 08:07:14] VERSION_ID="7"
[2024-05-16 08:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 08:07:14] ANSI_COLOR="0;31"
[2024-05-16 08:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 08:07:14] HOME_URL="https://www.centos.org/"
[2024-05-16 08:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 08:07:14] 
[2024-05-16 08:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 08:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 08:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 08:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 08:07:14] 
[2024-05-16 08:07:14] 2024-05-16 06:06:55,180 | INFO     | *************************************
[2024-05-16 08:07:14] 2024-05-16 06:06:55,683 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/1
[2024-05-16 08:07:14] 2024-05-16 06:06:55,703 | INFO     | sufficient remaining disk space (2967346348032 B)
[2024-05-16 08:07:14] 2024-05-16 06:06:55,703 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 08:07:14] 2024-05-16 06:06:55,704 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 08:07:14] 2024-05-16 06:06:55,704 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 08:07:14] 2024-05-16 06:06:55,763 | INFO     | all payload control threads have been joined
[2024-05-16 08:07:14] 2024-05-16 06:06:55,913 | INFO     | all data control threads have been joined
[2024-05-16 08:07:14] 2024-05-16 06:06:56,124 | INFO     | all job control threads have been joined
[2024-05-16 08:07:14] 2024-05-16 06:06:56,278 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 08:07:14] 2024-05-16 06:06:56,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 08:07:14] 2024-05-16 06:06:56,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 08:07:14] 2024-05-16 06:06:56,314 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:07:14] 2024-05-16 06:06:56,314 | INFO     | aborting loop
[2024-05-16 08:07:14] 2024-05-16 06:06:56,708 | INFO     | [job] retrieve thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:56,768 | INFO     | [payload] control thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:56,874 | INFO     | [job] validate thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:56,914 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:56,918 | INFO     | [data] control thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:56,939 | INFO     | [payload] failed_post thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,129 | INFO     | [job] control thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,319 | INFO     | [job] job monitor thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,372 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,459 | INFO     | [data] copytool_in thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,509 | INFO     | [payload] validate_post thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 08:07:14] 2024-05-16 06:06:57,709 | INFO     | [data] copytool_out thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,720 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:06:57,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 08:07:14] 2024-05-16 06:06:58,633 | INFO     | [job] queue monitor thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:07:01,890 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:07:06,354 | INFO     | job.realtimelogging is not enabled
[2024-05-16 08:07:14] 2024-05-16 06:07:07,359 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 08:07:14] 2024-05-16 06:07:08,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47494037988416)>', '<ExcThread(monitor, started 47494207137536)>']
[2024-05-16 08:07:14] 2024-05-16 06:07:09,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 08:07:14] 2024-05-16 06:07:09,341 | INFO     | [monitor] control thread has ended
[2024-05-16 08:07:14] 2024-05-16 06:07:13,808 | INFO     | all workflow threads have been joined
[2024-05-16 08:07:14] 2024-05-16 06:07:13,808 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 08:07:14] 2024-05-16 06:07:13,809 | INFO     | traces error code: 0
[2024-05-16 08:07:14] 2024-05-16 06:07:13,809 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 08:07:14] 2024-05-16 06:07:13,884 [wrapper] ==== pilot stdout END ====
[2024-05-16 08:07:14] 2024-05-16 06:07:13,886 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 08:07:14] 2024-05-16 06:07:13,888 [wrapper] pilotpid: 3361063
[2024-05-16 08:07:14] 2024-05-16 06:07:13,890 [wrapper] Pilot exit status: 0
[2024-05-16 08:07:14] 2024-05-16 06:07:13,898 [wrapper] pandaids: 6205838892
[2024-05-16 08:07:14] 2024-05-16 06:07:13,989 [wrapper] cleanup: SIGTERM to supervisor_pilot  265132 3361064
[2024-05-16 08:07:14] 2024-05-16 06:07:13,991 [wrapper] Test setup, not cleaning
[2024-05-16 08:07:14] 2024-05-16 06:07:13,994 [wrapper] ==== wrapper stdout END ====
[2024-05-16 08:07:14] 2024-05-16 06:07:13,997 [wrapper] ==== wrapper stderr END ====
[2024-05-16 08:07:14] 2024-05-16 06:07:14,002 [wrapper] apfmon messages muted
[2024-05-16 08:07:14]  *** Error codes and diagnostics ***
[2024-05-16 08:07:14]     "exeErrorCode": 0,
[2024-05-16 08:07:14]     "exeErrorDiag": "",
[2024-05-16 08:07:14]     "pilotErrorCode": 0,
[2024-05-16 08:07:14]     "pilotErrorDiag": "",
[2024-05-16 08:07:14]  *** Listing of results directory ***
[2024-05-16 08:07:14] total 836460
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc    467845 May 13 16:29 pilot3.tar.gz
[2024-05-16 08:07:14] -rwx------ 1 boinc boinc     32251 May 13 16:30 runpilot2-wrapper.sh
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc      5633 May 13 16:30 queuedata.json
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc       100 May 16 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 08:07:14] -rwxr-xr-x 1 boinc boinc      7986 May 16 04:39 run_atlas
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc       105 May 16 04:39 job.xml
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc      6642 May 16 04:39 init_data.xml
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc 600446953 May 16 04:39 EVNT.38776119._000281.pool.root.1
[2024-05-16 08:07:14] drwxrwx--x 2 boinc boinc      4096 May 16 04:39 shared
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc    480003 May 16 04:39 input.tar.gz
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc     17537 May 16 04:39 start_atlas.sh
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc         0 May 16 04:39 boinc_lockfile
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc      2633 May 16 04:39 pandaJob.out
[2024-05-16 08:07:14] -rw------- 1 boinc boinc       424 May 16 04:39 setup.sh.local
[2024-05-16 08:07:14] -rw------- 1 boinc boinc   1011355 May 16 04:39 agis_schedconf.cvmfs.json
[2024-05-16 08:07:14] -rw------- 1 boinc boinc   1324701 May 16 04:39 cric_ddmendpoints.json
[2024-05-16 08:07:14] drwx------ 4 boinc boinc      4096 May 16 04:39 pilot3
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc       531 May 16 08:06 boinc_task_state.xml
[2024-05-16 08:07:14] -rw------- 1 boinc boinc 249323583 May 16 08:06 HITS.38776125._006746.pool.root.1
[2024-05-16 08:07:14] -rw------- 1 boinc boinc        95 May 16 08:06 pilot_heartbeat.json
[2024-05-16 08:07:14] -rw------- 1 boinc boinc      1038 May 16 08:06 memory_monitor_summary.json
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc      8192 May 16 08:06 boinc_mmap_file
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc        28 May 16 08:06 wrapper_checkpoint.txt
[2024-05-16 08:07:14] -rw------- 1 boinc boinc         0 May 16 08:06 agis_ddmendpoints.agis.ALL.json
[2024-05-16 08:07:14] -rw------- 1 boinc boinc    336657 May 16 08:06 log.38776125._006746.job.log.tgz.1
[2024-05-16 08:07:14] -rw------- 1 boinc boinc      7716 May 16 08:06 heartbeat.json
[2024-05-16 08:07:14] -rw------- 1 boinc boinc      4294 May 16 08:07 pilotlog.txt
[2024-05-16 08:07:14] -rw------- 1 boinc boinc   1281500 May 16 08:07 log.38776125._006746.job.log.1
[2024-05-16 08:07:14] -rw------- 1 boinc boinc       357 May 16 08:07 output.list
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc       620 May 16 08:07 runtime_log
[2024-05-16 08:07:14] -rw------- 1 boinc boinc   1638400 May 16 08:07 result.tar.gz
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc     11410 May 16 08:07 runtime_log.err
[2024-05-16 08:07:14] -rw------- 1 boinc boinc       655 May 16 08:07 bVPMDmeslQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmx7GKDmNDyf9n.diag
[2024-05-16 08:07:14] -rw-r--r-- 1 boinc boinc     21288 May 16 08:07 stderr.txt
[2024-05-16 08:07:14] HITS file was successfully produced:
[2024-05-16 08:07:14] -rw------- 1 boinc boinc 249323583 May 16 08:06 shared/HITS.pool.root.1
[2024-05-16 08:07:14]  *** Contents of shared directory: ***
[2024-05-16 08:07:14] total 831960
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc 600446953 May 16 04:39 ATLAS.root_0
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc    480003 May 16 04:39 input.tar.gz
[2024-05-16 08:07:14] -rw-r--r-- 2 boinc boinc     17537 May 16 04:39 start_atlas.sh
[2024-05-16 08:07:14] -rw------- 1 boinc boinc 249323583 May 16 08:06 HITS.pool.root.1
[2024-05-16 08:07:14] -rw------- 1 boinc boinc   1638400 May 16 08:07 result.tar.gz
08:07:15 (3356383): run_atlas exited; CPU time 46434.898588
08:07:15 (3356383): called boinc_finish(0)

</stderr_txt>
]]>

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